BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00049964
         (892 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containi...   441   e-121
emb|CBI29560.3| unnamed protein product [Vitis vinifera]              441   e-121
emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]   439   e-121
ref|XP_007208151.1| hypothetical protein PRUPE_ppa022107mg [Prun...   427   e-117
ref|XP_004288283.1| PREDICTED: pentatricopeptide repeat-containi...   395   e-107
ref|XP_007047622.1| Pentatricopeptide repeat (PPR) superfamily p...   388   e-105
gb|EXB78258.1| hypothetical protein L484_007776 [Morus notabilis]     387   e-105
ref|XP_002320672.2| pentatricopeptide repeat-containing family p...   381   e-103
ref|XP_006358483.1| PREDICTED: pentatricopeptide repeat-containi...   379   e-103
ref|XP_006466415.1| PREDICTED: pentatricopeptide repeat-containi...   378   e-102
ref|XP_002530602.1| pentatricopeptide repeat-containing protein,...   375   e-101
ref|XP_004230390.1| PREDICTED: pentatricopeptide repeat-containi...   373   e-101
ref|XP_006426150.1| hypothetical protein CICLE_v10025015mg [Citr...   371   e-100
ref|XP_006404111.1| hypothetical protein EUTSA_v10010157mg [Eutr...   358   2e-96
ref|XP_002875992.1| pentatricopeptide repeat-containing protein ...   357   3e-96
ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containi...   357   4e-96
ref|XP_006292229.1| hypothetical protein CARUB_v10018435mg [Caps...   356   6e-96
ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   356   6e-96
ref|NP_190540.1| pentatricopeptide repeat-containing protein [Ar...   356   8e-96
ref|XP_007148494.1| hypothetical protein PHAVU_006G213400g [Phas...   352   1e-94

>ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  441 bits (1135), Expect = e-121
 Identities = 221/278 (79%), Positives = 244/278 (87%)
 Frame = +3

Query: 57  MSQISWNLQRFRYLLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFSNHFIILYSKCGRLA 236
           M+QISW LQRFR+LLK+ IAER+L  GK+L +LYIKS IPPSTYFSNHFI+LYSKCGRLA
Sbjct: 1   MNQISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLA 60

Query: 237 SARKAFDYTQYPNVFSFNAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGE 416
            ARKAF     PNVFSFNAII+AYAKES+  IAHQLFD+IP+PDLVS+NTLIS YADCGE
Sbjct: 61  WARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGE 120

Query: 417 SALVLQLFSEMREMGLDMDGFTLSGAITASCDDVDLIKQIHSVAVSAGFDSYVSVGNALV 596
           +A  L LFS MREMGLDMDGFTLS  ITA CDDV LI Q+HSVAVS+GFDSYVSV NAL+
Sbjct: 121 TAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALL 180

Query: 597 TYYSKNGFLEEAKRAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDM 776
           TYY KNG L++AKR F+ MG I+DE+SWNSMIVAYGQH+EGSKAL +FQEMVRR LNVDM
Sbjct: 181 TYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDM 240

Query: 777 FTLASVLTAFTCLEDLLGGLQFHAQLIKTGFHQNSHVG 890
           FTLASVLTAFTCLEDL GGLQFH QLIKTGFHQNSHVG
Sbjct: 241 FTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVG 278



 Score = 90.5 bits (223), Expect = 8e-16
 Identities = 82/270 (30%), Positives = 126/270 (46%), Gaps = 9/270 (3%)
 Frame = +3

Query: 21  QEGSSTCEPSK*MSQISWNLQRFRY--LLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFS 194
           QEGS      + M +   N+  F    +L +F    +L  G       IK+    +++  
Sbjct: 219 QEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVG 278

Query: 195 NHFIILYSKCGR-LASARKAFDYTQYPNVFSFNAIISAYAKESQIQIAHQLFDRIPQPDL 371
           +  I LYSKCG  ++  RK                               +F+ I +PDL
Sbjct: 279 SGLIDLYSKCGGGMSDCRK-------------------------------VFEEITEPDL 307

Query: 372 VSWNTLISGYADCGESAL--VLQLFSEMREMGLDMDGFTLSGAITASCDDVDLI---KQI 536
           V WNT++SGY+   E  L   L+ F +M+ +G   +  +    I+A C ++      KQI
Sbjct: 308 VLWNTMVSGYSQ-NEEFLEDALECFRQMQGIGYRPNDCSFVCVISA-CSNLSSPSQGKQI 365

Query: 537 HSVAVSAGFDS-YVSVGNALVTYYSKNGFLEEAKRAFHEMGVIKDEISWNSMIVAYGQHR 713
           HS+A+ +   S  +SV NAL+  YSK G L++A+R F  M    + +S NSMI  Y QH 
Sbjct: 366 HSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAE-HNTVSLNSMIAGYAQHG 424

Query: 714 EGSKALAMFQEMVRRALNVDMFTLASVLTA 803
              ++L +FQ M+ R +     T  SVL+A
Sbjct: 425 IEMESLHLFQWMLERQIAPTSITFISVLSA 454



 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 5/223 (2%)
 Frame = +3

Query: 225 GRLASARKAFDYTQYPNVFSFNAIISAYAKESQIQIAHQLFDRIPQ-PDLVSWNTLISGY 401
           G+L S   +  +  Y +V   NA+++ Y K   +  A ++F  +    D VSWN++I  Y
Sbjct: 158 GQLHSVAVSSGFDSYVSVN--NALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAY 215

Query: 402 ADCGESALVLQLFSEMREMGLDMDGFTLSGAITA-SC-DDVDLIKQIHSVAVSAGFDSYV 575
               E +  L LF EM   GL++D FTL+  +TA +C +D+    Q H   +  GF    
Sbjct: 216 GQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNS 275

Query: 576 SVGNALVTYYSK-NGFLEEAKRAFHEMGVIKDEISWNSMIVAYGQHREG-SKALAMFQEM 749
            VG+ L+  YSK  G + + ++ F E+    D + WN+M+  Y Q+ E    AL  F++M
Sbjct: 276 HVGSGLIDLYSKCGGGMSDCRKVFEEI-TEPDLVLWNTMVSGYSQNEEFLEDALECFRQM 334

Query: 750 VRRALNVDMFTLASVLTAFTCLEDLLGGLQFHAQLIKTGFHQN 878
                  +  +   V++A + L     G Q H+  +K+    N
Sbjct: 335 QGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSN 377


>emb|CBI29560.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  441 bits (1135), Expect = e-121
 Identities = 221/278 (79%), Positives = 244/278 (87%)
 Frame = +3

Query: 57  MSQISWNLQRFRYLLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFSNHFIILYSKCGRLA 236
           M+QISW LQRFR+LLK+ IAER+L  GK+L +LYIKS IPPSTYFSNHFI+LYSKCGRLA
Sbjct: 1   MNQISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLA 60

Query: 237 SARKAFDYTQYPNVFSFNAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGE 416
            ARKAF     PNVFSFNAII+AYAKES+  IAHQLFD+IP+PDLVS+NTLIS YADCGE
Sbjct: 61  WARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGE 120

Query: 417 SALVLQLFSEMREMGLDMDGFTLSGAITASCDDVDLIKQIHSVAVSAGFDSYVSVGNALV 596
           +A  L LFS MREMGLDMDGFTLS  ITA CDDV LI Q+HSVAVS+GFDSYVSV NAL+
Sbjct: 121 TAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALL 180

Query: 597 TYYSKNGFLEEAKRAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDM 776
           TYY KNG L++AKR F+ MG I+DE+SWNSMIVAYGQH+EGSKAL +FQEMVRR LNVDM
Sbjct: 181 TYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDM 240

Query: 777 FTLASVLTAFTCLEDLLGGLQFHAQLIKTGFHQNSHVG 890
           FTLASVLTAFTCLEDL GGLQFH QLIKTGFHQNSHVG
Sbjct: 241 FTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVG 278



 Score = 85.5 bits (210), Expect = 3e-14
 Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 5/220 (2%)
 Frame = +3

Query: 225 GRLASARKAFDYTQYPNVFSFNAIISAYAKESQIQIAHQLFDRIPQ-PDLVSWNTLISGY 401
           G+L S   +  +  Y +V   NA+++ Y K   +  A ++F  +    D VSWN++I  Y
Sbjct: 158 GQLHSVAVSSGFDSYVSVN--NALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAY 215

Query: 402 ADCGESALVLQLFSEMREMGLDMDGFTLSGAITA-SC-DDVDLIKQIHSVAVSAGFDSYV 575
               E +  L LF EM   GL++D FTL+  +TA +C +D+    Q H   +  GF    
Sbjct: 216 GQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNS 275

Query: 576 SVGNALVTYYSK-NGFLEEAKRAFHEMGVIKDEISWNSMIVAYGQHREG-SKALAMFQEM 749
            VG+ L+  YSK  G + + ++ F E+    D + WN+M+  Y Q+ E    AL  F++M
Sbjct: 276 HVGSGLIDLYSKCGGGMSDCRKVFEEI-TEPDLVLWNTMVSGYSQNEEFLEDALECFRQM 334

Query: 750 VRRALNVDMFTLASVLTAFTCLEDLLGGLQFHAQLIKTGF 869
                  +  +   V++A + L     G Q H+  +K  F
Sbjct: 335 QGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKRLF 374


>emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  439 bits (1128), Expect = e-121
 Identities = 220/278 (79%), Positives = 243/278 (87%)
 Frame = +3

Query: 57  MSQISWNLQRFRYLLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFSNHFIILYSKCGRLA 236
           M+QISW LQRFR+LLK+ IAER+L  GK+L +LYIKS IPPSTYFSNHFI+LYSKCGRLA
Sbjct: 1   MNQISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLA 60

Query: 237 SARKAFDYTQYPNVFSFNAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGE 416
            ARKAF     PNVFSFNAII+AYAKES+  IAHQLFD+IP+PDLVS+NTLIS YADCGE
Sbjct: 61  WARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGE 120

Query: 417 SALVLQLFSEMREMGLDMDGFTLSGAITASCDDVDLIKQIHSVAVSAGFDSYVSVGNALV 596
           +A  L LFS MREMGLDMD FTLS  ITA CDDV LI Q+HSVAVS+GFDSYVSV NAL+
Sbjct: 121 TAPALGLFSGMREMGLDMDXFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALL 180

Query: 597 TYYSKNGFLEEAKRAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDM 776
           TYY KNG L++AKR F+ MG I+DE+SWNSMIVAYGQH+EGSKAL +FQEMVRR LNVDM
Sbjct: 181 TYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDM 240

Query: 777 FTLASVLTAFTCLEDLLGGLQFHAQLIKTGFHQNSHVG 890
           FTLASVLTAFTCLEDL GGLQFH QLIKTGFHQNSHVG
Sbjct: 241 FTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVG 278



 Score = 90.5 bits (223), Expect = 8e-16
 Identities = 82/270 (30%), Positives = 126/270 (46%), Gaps = 9/270 (3%)
 Frame = +3

Query: 21  QEGSSTCEPSK*MSQISWNLQRFRY--LLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFS 194
           QEGS      + M +   N+  F    +L +F    +L  G       IK+    +++  
Sbjct: 219 QEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVG 278

Query: 195 NHFIILYSKCGR-LASARKAFDYTQYPNVFSFNAIISAYAKESQIQIAHQLFDRIPQPDL 371
           +  I LYSKCG  ++  RK                               +F+ I +PDL
Sbjct: 279 SGLIDLYSKCGGGMSDCRK-------------------------------VFEEITEPDL 307

Query: 372 VSWNTLISGYADCGESAL--VLQLFSEMREMGLDMDGFTLSGAITASCDDVDLI---KQI 536
           V WNT++SGY+   E  L   L+ F +M+ +G   +  +    I+A C ++      KQI
Sbjct: 308 VLWNTMVSGYSQ-NEEFLEDALECFRQMQGIGYRPNDCSFVCVISA-CSNLSSPSQGKQI 365

Query: 537 HSVAVSAGFDS-YVSVGNALVTYYSKNGFLEEAKRAFHEMGVIKDEISWNSMIVAYGQHR 713
           HS+A+ +   S  +SV NAL+  YSK G L++A+R F  M    + +S NSMI  Y QH 
Sbjct: 366 HSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAE-HNTVSLNSMIAGYAQHG 424

Query: 714 EGSKALAMFQEMVRRALNVDMFTLASVLTA 803
              ++L +FQ M+ R +     T  SVL+A
Sbjct: 425 IEMESLHLFQWMLERQIAPTSITFISVLSA 454



 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 5/223 (2%)
 Frame = +3

Query: 225 GRLASARKAFDYTQYPNVFSFNAIISAYAKESQIQIAHQLFDRIPQ-PDLVSWNTLISGY 401
           G+L S   +  +  Y +V   NA+++ Y K   +  A ++F  +    D VSWN++I  Y
Sbjct: 158 GQLHSVAVSSGFDSYVSVN--NALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAY 215

Query: 402 ADCGESALVLQLFSEMREMGLDMDGFTLSGAITA-SC-DDVDLIKQIHSVAVSAGFDSYV 575
               E +  L LF EM   GL++D FTL+  +TA +C +D+    Q H   +  GF    
Sbjct: 216 GQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNS 275

Query: 576 SVGNALVTYYSK-NGFLEEAKRAFHEMGVIKDEISWNSMIVAYGQHREG-SKALAMFQEM 749
            VG+ L+  YSK  G + + ++ F E+    D + WN+M+  Y Q+ E    AL  F++M
Sbjct: 276 HVGSGLIDLYSKCGGGMSDCRKVFEEI-TEPDLVLWNTMVSGYSQNEEFLEDALECFRQM 334

Query: 750 VRRALNVDMFTLASVLTAFTCLEDLLGGLQFHAQLIKTGFHQN 878
                  +  +   V++A + L     G Q H+  +K+    N
Sbjct: 335 QGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSN 377


>ref|XP_007208151.1| hypothetical protein PRUPE_ppa022107mg [Prunus persica]
           gi|462403793|gb|EMJ09350.1| hypothetical protein
           PRUPE_ppa022107mg [Prunus persica]
          Length = 720

 Score =  427 bits (1097), Expect = e-117
 Identities = 209/278 (75%), Positives = 238/278 (85%)
 Frame = +3

Query: 57  MSQISWNLQRFRYLLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFSNHFIILYSKCGRLA 236
           M+Q+S  LQ FR+LLK+ IAER+L  GK+L  LY KSL+PPSTY SNHFI+LYSKCGRL+
Sbjct: 1   MNQLSCALQNFRHLLKTCIAERDLFTGKSLHALYFKSLLPPSTYLSNHFILLYSKCGRLS 60

Query: 237 SARKAFDYTQYPNVFSFNAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGE 416
           SAR AFD TQ PNVFSFNAI++AYAKES   IAHQ+FD+IP PDLVS+NTLIS YAD GE
Sbjct: 61  SARNAFDQTQEPNVFSFNAIVAAYAKESHTHIAHQMFDKIPHPDLVSYNTLISAYADRGE 120

Query: 417 SALVLQLFSEMREMGLDMDGFTLSGAITASCDDVDLIKQIHSVAVSAGFDSYVSVGNALV 596
           +   L LF+ MR MGLDMDGFT+S  IT  CDD+ LI+Q+HSVAVS GFDSYVSV NALV
Sbjct: 121 TEPALSLFTGMRNMGLDMDGFTISAVITGCCDDIGLIRQLHSVAVSGGFDSYVSVNNALV 180

Query: 597 TYYSKNGFLEEAKRAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDM 776
           TYYSKNGFL EAKR F+ MG ++DE+SWNSMIVAYGQHR+G +ALA+FQEMVR  L VDM
Sbjct: 181 TYYSKNGFLGEAKRVFYVMGEMRDEVSWNSMIVAYGQHRQGLRALALFQEMVRMGLKVDM 240

Query: 777 FTLASVLTAFTCLEDLLGGLQFHAQLIKTGFHQNSHVG 890
           FTLASVLTAFTC+EDLLGGLQFHA+LIKTGFHQNSHVG
Sbjct: 241 FTLASVLTAFTCVEDLLGGLQFHAKLIKTGFHQNSHVG 278



 Score = 97.1 bits (240), Expect = 8e-18
 Identities = 80/243 (32%), Positives = 115/243 (47%), Gaps = 7/243 (2%)
 Frame = +3

Query: 96  LLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFSNHFIILYSKC--GRLASARKAFDYTQY 269
           +L +F    +LL G       IK+    +++  +  I LYSKC  G ++  RK       
Sbjct: 246 VLTAFTCVEDLLGGLQFHAKLIKTGFHQNSHVGSGLIDLYSKCAAGGMSDCRK------- 298

Query: 270 PNVFSFNAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGE-SALVLQLFSE 446
                                   LF+ IP PDLV WNT+ISGY+   E S   L  F +
Sbjct: 299 ------------------------LFEEIPYPDLVLWNTMISGYSQNDEFSEDALDCFRQ 334

Query: 447 MREMGLDMDGFTLSGAITASCDDVDLI---KQIHSVAVSAGFDS-YVSVGNALVTYYSKN 614
           M+ +G   D  +    I+A C ++      KQIH++A+ +   S  VSV NALV  YSK 
Sbjct: 335 MQRVGHCADDCSFVCVISA-CSNLSSPSQGKQIHALAIKSDIPSNKVSVNNALVAMYSKC 393

Query: 615 GFLEEAKRAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDMFTLASV 794
           G L +A+R F  M    + +S NSMI  Y QH  G ++L +F+ M+   +     T  SV
Sbjct: 394 GNLHDARRLFDRMPE-HNTVSLNSMIAGYAQHGIGVESLRLFEHMLVMDIVPSSITFISV 452

Query: 795 LTA 803
           L+A
Sbjct: 453 LSA 455



 Score = 91.3 bits (225), Expect = 5e-16
 Identities = 67/203 (33%), Positives = 103/203 (50%), Gaps = 6/203 (2%)
 Frame = +3

Query: 288 NAIISAYAKESQIQIAHQLFDRIPQP-DLVSWNTLISGYADCGESALVLQLFSEMREMGL 464
           NA+++ Y+K   +  A ++F  + +  D VSWN++I  Y    +    L LF EM  MGL
Sbjct: 177 NALVTYYSKNGFLGEAKRVFYVMGEMRDEVSWNSMIVAYGQHRQGLRALALFQEMVRMGL 236

Query: 465 DMDGFTLSGAITASCDDVDLIK--QIHSVAVSAGFDSYVSVGNALVTYYSK--NGFLEEA 632
            +D FTL+  +TA     DL+   Q H+  +  GF     VG+ L+  YSK   G + + 
Sbjct: 237 KVDMFTLASVLTAFTCVEDLLGGLQFHAKLIKTGFHQNSHVGSGLIDLYSKCAAGGMSDC 296

Query: 633 KRAFHEMGVIKDEISWNSMIVAYGQHREGSK-ALAMFQEMVRRALNVDMFTLASVLTAFT 809
           ++ F E+    D + WN+MI  Y Q+ E S+ AL  F++M R     D  +   V++A +
Sbjct: 297 RKLFEEI-PYPDLVLWNTMISGYSQNDEFSEDALDCFRQMQRVGHCADDCSFVCVISACS 355

Query: 810 CLEDLLGGLQFHAQLIKTGFHQN 878
            L     G Q HA  IK+    N
Sbjct: 356 NLSSPSQGKQIHALAIKSDIPSN 378


>ref|XP_004288283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Fragaria vesca subsp. vesca]
          Length = 719

 Score =  395 bits (1015), Expect = e-107
 Identities = 196/278 (70%), Positives = 225/278 (80%)
 Frame = +3

Query: 57  MSQISWNLQRFRYLLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFSNHFIILYSKCGRLA 236
           M Q++W  Q FR +LK+ IAER+L  GK L  LY KSLIP STY SNHFI+LYS   RL 
Sbjct: 1   MKQVTWTFQTFRNVLKTCIAERDLYTGKALHALYFKSLIPSSTYISNHFILLYSNSRRLL 60

Query: 237 SARKAFDYTQYPNVFSFNAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGE 416
           SAR AF  T  PNVFS+NAII+AYAK+SQ ++AHQLFD IP+PDLVS+NTLIS YA+ GE
Sbjct: 61  SARNAFCATHDPNVFSYNAIIAAYAKQSQTKLAHQLFDEIPEPDLVSYNTLISAYAERGE 120

Query: 417 SALVLQLFSEMREMGLDMDGFTLSGAITASCDDVDLIKQIHSVAVSAGFDSYVSVGNALV 596
           +   L LF  MRE+GLD DGFT+SG IT  CDDV LI+Q+H V V  GFD YVSV NAL+
Sbjct: 121 TEKALGLFGRMREVGLDPDGFTISGVITGCCDDVGLIRQLHCVVVRGGFDWYVSVSNALL 180

Query: 597 TYYSKNGFLEEAKRAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDM 776
           +YYSKNG LEEAKR F  MG ++DE++WNSMIVAYGQHREG KAL +FQEMVRR  +VDM
Sbjct: 181 SYYSKNGLLEEAKRVFSLMGGMQDEVTWNSMIVAYGQHREGLKALGLFQEMVRRGFSVDM 240

Query: 777 FTLASVLTAFTCLEDLLGGLQFHAQLIKTGFHQNSHVG 890
           FTLASVLTAFTC+EDLLGGLQFHA+LIKTGFHQNSHVG
Sbjct: 241 FTLASVLTAFTCVEDLLGGLQFHAKLIKTGFHQNSHVG 278



 Score = 94.7 bits (234), Expect = 4e-17
 Identities = 74/242 (30%), Positives = 115/242 (47%), Gaps = 6/242 (2%)
 Frame = +3

Query: 96  LLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFSNHFIILYSKC-GRLASARKAFDYTQYP 272
           +L +F    +LL G       IK+    +++  +  I LYSKC G ++  RK        
Sbjct: 246 VLTAFTCVEDLLGGLQFHAKLIKTGFHQNSHVGSGLIDLYSKCAGGMSECRK-------- 297

Query: 273 NVFSFNAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGE-SALVLQLFSEM 449
                                  +F+ IP PDLV WNT+ISGY+   E S   +     M
Sbjct: 298 -----------------------VFEEIPAPDLVLWNTMISGYSQSDEFSEDAIDCLRHM 334

Query: 450 REMGLDMDGFTLSGAITASCDDVDLI---KQIHSVAVSAGFDS-YVSVGNALVTYYSKNG 617
           + +G   D  +    + ++C ++      KQIH++A+ +   S  +SV NALV  YSK G
Sbjct: 335 QRVGYCPDDCSFV-CVVSACSNLSSPFQGKQIHALAIKSEIPSNRISVNNALVAMYSKCG 393

Query: 618 FLEEAKRAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDMFTLASVL 797
            L++A+R F  M    + +S NSMI  Y QH  G ++L +F+ M++  +     T  SVL
Sbjct: 394 KLQDARRLFDRMPE-HNTVSLNSMIAGYAQHGIGMESLCLFEHMLQTNVVPTSITFISVL 452

Query: 798 TA 803
           +A
Sbjct: 453 SA 454



 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 65/202 (32%), Positives = 98/202 (48%), Gaps = 5/202 (2%)
 Frame = +3

Query: 288 NAIISAYAKESQIQIAHQLFDRIP-QPDLVSWNTLISGYADCGESALVLQLFSEMREMGL 464
           NA++S Y+K   ++ A ++F  +    D V+WN++I  Y    E    L LF EM   G 
Sbjct: 177 NALLSYYSKNGLLEEAKRVFSLMGGMQDEVTWNSMIVAYGQHREGLKALGLFQEMVRRGF 236

Query: 465 DMDGFTLSGAITASCDDVDLIK--QIHSVAVSAGFDSYVSVGNALVTYYSK-NGFLEEAK 635
            +D FTL+  +TA     DL+   Q H+  +  GF     VG+ L+  YSK  G + E +
Sbjct: 237 SVDMFTLASVLTAFTCVEDLLGGLQFHAKLIKTGFHQNSHVGSGLIDLYSKCAGGMSECR 296

Query: 636 RAFHEMGVIKDEISWNSMIVAYGQHREGSK-ALAMFQEMVRRALNVDMFTLASVLTAFTC 812
           + F E+    D + WN+MI  Y Q  E S+ A+   + M R     D  +   V++A + 
Sbjct: 297 KVFEEIPA-PDLVLWNTMISGYSQSDEFSEDAIDCLRHMQRVGYCPDDCSFVCVVSACSN 355

Query: 813 LEDLLGGLQFHAQLIKTGFHQN 878
           L     G Q HA  IK+    N
Sbjct: 356 LSSPFQGKQIHALAIKSEIPSN 377


>ref|XP_007047622.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao] gi|508699883|gb|EOX91779.1| Pentatricopeptide
           repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 718

 Score =  388 bits (997), Expect = e-105
 Identities = 195/278 (70%), Positives = 225/278 (80%)
 Frame = +3

Query: 57  MSQISWNLQRFRYLLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFSNHFIILYSKCGRLA 236
           M+Q+SW +Q FR LLK+ I  R+LL GK+L  LYIKSLIP STY SNHFI+LYSKCG L 
Sbjct: 1   MTQMSWTIQTFRNLLKTCITHRDLLTGKSLHALYIKSLIPSSTYLSNHFILLYSKCGHLT 60

Query: 237 SARKAFDYTQYPNVFSFNAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGE 416
           +A  AF  TQ PN FSFNAII+AYAKES   +AHQLFD+IPQPDLVS+NTLIS YADCG+
Sbjct: 61  AAHNAFHQTQDPNTFSFNAIIAAYAKESFPFVAHQLFDQIPQPDLVSYNTLISAYADCGK 120

Query: 417 SALVLQLFSEMREMGLDMDGFTLSGAITASCDDVDLIKQIHSVAVSAGFDSYVSVGNALV 596
           +   L LF +MRE+G +MDGFTLSG ITA  +D+ L++Q+H   V  GF SY SV NAL+
Sbjct: 121 TEPALGLFKKMRELGFEMDGFTLSGVITACLNDLFLLRQLHCFLVFCGFHSYASVNNALL 180

Query: 597 TYYSKNGFLEEAKRAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDM 776
           + YSK G LEEAKR F+ MG  KDE+SWNSMIVAYGQH+EG+KALA+FQEMVR  L VDM
Sbjct: 181 SCYSKEGLLEEAKRVFYGMGEGKDEVSWNSMIVAYGQHKEGAKALALFQEMVRIGLVVDM 240

Query: 777 FTLASVLTAFTCLEDLLGGLQFHAQLIKTGFHQNSHVG 890
           FTLASVLTAFT LEDLLGGLQFHA LIKTGFHQN+HVG
Sbjct: 241 FTLASVLTAFTSLEDLLGGLQFHAMLIKTGFHQNAHVG 278



 Score =  101 bits (251), Expect = 4e-19
 Identities = 69/205 (33%), Positives = 107/205 (52%), Gaps = 5/205 (2%)
 Frame = +3

Query: 288 NAIISAYAKESQIQIAHQLFDRIPQ-PDLVSWNTLISGYADCGESALVLQLFSEMREMGL 464
           NA++S Y+KE  ++ A ++F  + +  D VSWN++I  Y    E A  L LF EM  +GL
Sbjct: 177 NALLSCYSKEGLLEEAKRVFYGMGEGKDEVSWNSMIVAYGQHKEGAKALALFQEMVRIGL 236

Query: 465 DMDGFTLSGAITASCDDVDLIK--QIHSVAVSAGFDSYVSVGNALVTYYSK-NGFLEEAK 635
            +D FTL+  +TA     DL+   Q H++ +  GF     VG+ L+  YSK  G + + +
Sbjct: 237 VVDMFTLASVLTAFTSLEDLLGGLQFHAMLIKTGFHQNAHVGSGLIDLYSKCGGGMSDCR 296

Query: 636 RAFHEMGVIKDEISWNSMIVAYGQHRE-GSKALAMFQEMVRRALNVDMFTLASVLTAFTC 812
           + F E+    D + WN++I  Y  + E   +AL  FQEM     + D  +  +V++A + 
Sbjct: 297 KVFDEVSG-PDLVLWNTVISGYSLNEELAEEALECFQEMRCVGYHPDDCSFVNVISACSN 355

Query: 813 LEDLLGGLQFHAQLIKTGFHQNSHV 887
           L     G Q HA  IK+  H    V
Sbjct: 356 LSSPSQGRQIHALAIKSETHNRIQV 380



 Score = 97.8 bits (242), Expect = 5e-18
 Identities = 75/241 (31%), Positives = 117/241 (48%), Gaps = 5/241 (2%)
 Frame = +3

Query: 96  LLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFSNHFIILYSKCGR-LASARKAFDYTQYP 272
           +L +F +  +LL G     + IK+    + +  +  I LYSKCG  ++  RK        
Sbjct: 246 VLTAFTSLEDLLGGLQFHAMLIKTGFHQNAHVGSGLIDLYSKCGGGMSDCRK-------- 297

Query: 273 NVFSFNAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGESAL-VLQLFSEM 449
                                  +FD +  PDLV WNT+ISGY+   E A   L+ F EM
Sbjct: 298 -----------------------VFDEVSGPDLVLWNTVISGYSLNEELAEEALECFQEM 334

Query: 450 REMGLDMDGFTLSGAITASCDDVDLI---KQIHSVAVSAGFDSYVSVGNALVTYYSKNGF 620
           R +G   D  +    I+A C ++      +QIH++A+ +   + + V NALV  YSK G 
Sbjct: 335 RCVGYHPDDCSFVNVISA-CSNLSSPSQGRQIHALAIKSETHNRIQVNNALVAMYSKCGN 393

Query: 621 LEEAKRAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDMFTLASVLT 800
           L +A+  F  M    + +S NSMI  Y +H  G ++L +F++M+ R ++    T  SVL+
Sbjct: 394 LHDARWLFDRMPE-HNTVSLNSMIAGYAEHGIGMESLLLFEQMLERNISPTSVTFISVLS 452

Query: 801 A 803
           A
Sbjct: 453 A 453



 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 55/225 (24%), Positives = 91/225 (40%), Gaps = 10/225 (4%)
 Frame = +3

Query: 66  ISWNLQRFRYLLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFSNHFIILYSKCGRLASAR 245
           + WN     Y L   +AE  L   +  Q +      P    F N    + S C  L+S  
Sbjct: 308 VLWNTVISGYSLNEELAEEAL---ECFQEMRCVGYHPDDCSFVN----VISACSNLSSPS 360

Query: 246 K-------AFDYTQYPNVFSFNAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYA 404
           +       A     +  +   NA+++ Y+K   +  A  LFDR+P+ + VS N++I+GYA
Sbjct: 361 QGRQIHALAIKSETHNRIQVNNALVAMYSKCGNLHDARWLFDRMPEHNTVSLNSMIAGYA 420

Query: 405 DCGESALVLQLFSEMREMGLDMDGFTLSGAITASCDDVDL---IKQIHSVAVSAGFDSYV 575
           + G     L LF +M E  +     T    ++A      L    K  + +    G +  V
Sbjct: 421 EHGIGMESLLLFEQMLERNISPTSVTFISVLSACAHTGKLEEGQKYFNIMKEKFGIEPEV 480

Query: 576 SVGNALVTYYSKNGFLEEAKRAFHEMGVIKDEISWNSMIVAYGQH 710
              + ++    + G L EA+R    M      I W +++ A   H
Sbjct: 481 EHYSCMIDLLGRAGKLSEAERLIETMPFSPGSIGWAALLSACKMH 525


>gb|EXB78258.1| hypothetical protein L484_007776 [Morus notabilis]
          Length = 719

 Score =  387 bits (995), Expect = e-105
 Identities = 195/278 (70%), Positives = 230/278 (82%)
 Frame = +3

Query: 57  MSQISWNLQRFRYLLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFSNHFIILYSKCGRLA 236
           M+QIS  LQ FR+LLK+ IA+R+L  GK+L TLYIKSL+  STY SNHFI+LYSKCGRL+
Sbjct: 1   MNQISRTLQNFRHLLKTCIADRDLFTGKSLHTLYIKSLVSHSTYLSNHFIVLYSKCGRLS 60

Query: 237 SARKAFDYTQYPNVFSFNAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGE 416
            AR+AF+    PNVF+FNAII+AYAKES I +A QLFD+IP+PDLVS+NTLIS YAD G+
Sbjct: 61  LARRAFNGIPEPNVFTFNAIIAAYAKESLIHVARQLFDQIPRPDLVSYNTLISAYADRGD 120

Query: 417 SALVLQLFSEMREMGLDMDGFTLSGAITASCDDVDLIKQIHSVAVSAGFDSYVSVGNALV 596
           +   L LF  MREMGLDMDGFTLS AI A  DDV LI+Q+HSVAVS GFDSY SV N+L+
Sbjct: 121 TRQALCLFGGMREMGLDMDGFTLSAAIAARSDDVGLIRQLHSVAVSGGFDSYTSVNNSLI 180

Query: 597 TYYSKNGFLEEAKRAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDM 776
           TYY KNG L EAK+ F+ M  +KDE+SWNSMIVAYGQ+REGSKAL++F+EMVR   NVDM
Sbjct: 181 TYYGKNGHLGEAKKIFYGMSEMKDEVSWNSMIVAYGQNREGSKALSLFREMVRMGFNVDM 240

Query: 777 FTLASVLTAFTCLEDLLGGLQFHAQLIKTGFHQNSHVG 890
           FTLASVLTAFT + D LGGLQFHA+LIK GF++NSHVG
Sbjct: 241 FTLASVLTAFTSMGDFLGGLQFHAKLIKAGFNRNSHVG 278



 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 7/269 (2%)
 Frame = +3

Query: 18  SQEGSSTCEPSK*MSQISWNLQRFRY--LLKSFIAERNLLKGKTLQTLYIKSLIPPSTYF 191
           ++EGS      + M ++ +N+  F    +L +F +  + L G       IK+    +++ 
Sbjct: 218 NREGSKALSLFREMVRMGFNVDMFTLASVLTAFTSMGDFLGGLQFHAKLIKAGFNRNSHV 277

Query: 192 SNHFIILYSKCGRLASARKAFDYTQYPNVFSFNAIISAYAKESQIQIAHQLFDRIPQPDL 371
            +  I  YSKC                                 + +  ++F+ I  PDL
Sbjct: 278 GSGLIDFYSKC------------------------------PGDMLVCRKIFEEILSPDL 307

Query: 372 VSWNTLISGYADCGE-SALVLQLFSEMREMGLDMDGFTLSGAITASCDDVDLI---KQIH 539
           V WNT+ISGY+   E S   L  F +M+ +G   D  +    I+A C ++      KQIH
Sbjct: 308 VLWNTMISGYSQNEEFSEAALDCFQQMQRIGHCPDDCSFVCVISA-CSNLSSPSKGKQIH 366

Query: 540 SVAVSAGFDS-YVSVGNALVTYYSKNGFLEEAKRAFHEMGVIKDEISWNSMIVAYGQHRE 716
           S+A+ +   S  +SV NAL+T YSK G L +A+R F  M    + +S NSMI  Y QH  
Sbjct: 367 SLAIKSEIPSNRISVSNALITMYSKCGNLRDARRLFDRMPE-HNTVSLNSMITGYAQHGF 425

Query: 717 GSKALAMFQEMVRRALNVDMFTLASVLTA 803
           G +++++F+++++  +     T  S+++A
Sbjct: 426 GMESISLFEQLLQANIVPSSITFISIISA 454



 Score = 95.1 bits (235), Expect = 3e-17
 Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 5/202 (2%)
 Frame = +3

Query: 288 NAIISAYAKESQIQIAHQLFDRIPQ-PDLVSWNTLISGYADCGESALVLQLFSEMREMGL 464
           N++I+ Y K   +  A ++F  + +  D VSWN++I  Y    E +  L LF EM  MG 
Sbjct: 177 NSLITYYGKNGHLGEAKKIFYGMSEMKDEVSWNSMIVAYGQNREGSKALSLFREMVRMGF 236

Query: 465 DMDGFTLSGAITASCDDVDLIK--QIHSVAVSAGFDSYVSVGNALVTYYSK-NGFLEEAK 635
           ++D FTL+  +TA     D +   Q H+  + AGF+    VG+ L+ +YSK  G +   +
Sbjct: 237 NVDMFTLASVLTAFTSMGDFLGGLQFHAKLIKAGFNRNSHVGSGLIDFYSKCPGDMLVCR 296

Query: 636 RAFHEMGVIKDEISWNSMIVAYGQHREGSK-ALAMFQEMVRRALNVDMFTLASVLTAFTC 812
           + F E+ +  D + WN+MI  Y Q+ E S+ AL  FQ+M R     D  +   V++A + 
Sbjct: 297 KIFEEI-LSPDLVLWNTMISGYSQNEEFSEAALDCFQQMQRIGHCPDDCSFVCVISACSN 355

Query: 813 LEDLLGGLQFHAQLIKTGFHQN 878
           L     G Q H+  IK+    N
Sbjct: 356 LSSPSKGKQIHSLAIKSEIPSN 377



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
 Frame = +3

Query: 132 KGKTLQTLYIKSLIPPSTY-FSNHFIILYSKCGRLASARKAFDYTQYPNVFSFNAIISAY 308
           KGK + +L IKS IP +    SN  I +YSKCG L  AR+ FD     N  S N++I+ Y
Sbjct: 361 KGKQIHSLAIKSEIPSNRISVSNALITMYSKCGNLRDARRLFDRMPEHNTVSLNSMITGY 420

Query: 309 AKESQIQIAHQLFDRIPQ----PDLVSWNTLISGYADCGESALVLQLFSEMRE 455
           A+      +  LF+++ Q    P  +++ ++IS  A  G+ +   + F+ M+E
Sbjct: 421 AQHGFGMESISLFEQLLQANIVPSSITFISIISACAHTGKVSEGQKYFNMMKE 473



 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 12/182 (6%)
 Frame = +3

Query: 201 FIILYSKCGRLASARKAFDY------TQYPN--VFSFNAIISAYAKESQIQIAHQLFDRI 356
           F+ + S C  L+S  K          ++ P+  +   NA+I+ Y+K   ++ A +LFDR+
Sbjct: 346 FVCVISACSNLSSPSKGKQIHSLAIKSEIPSNRISVSNALITMYSKCGNLRDARRLFDRM 405

Query: 357 PQPDLVSWNTLISGYADCGESALVLQLFSEMREMGLDMDGFTLSGAITASCDDVDLI--- 527
           P+ + VS N++I+GYA  G     + LF ++ +  +     T    I+A C     +   
Sbjct: 406 PEHNTVSLNSMITGYAQHGFGMESISLFEQLLQANIVPSSITFISIISA-CAHTGKVSEG 464

Query: 528 -KQIHSVAVSAGFDSYVSVGNALVTYYSKNGFLEEAKRAFHEMGVIKDEISWNSMIVAYG 704
            K  + +    G +      + ++    + G L EAKR    M +      W +++ A  
Sbjct: 465 QKYFNMMKEKFGIEPEAEHYSCVIDLLGRAGKLAEAKRLIESMPIRPGSDVWAALLGACR 524

Query: 705 QH 710
           +H
Sbjct: 525 KH 526


>ref|XP_002320672.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550323097|gb|EEE98987.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 720

 Score =  381 bits (978), Expect = e-103
 Identities = 186/279 (66%), Positives = 227/279 (81%), Gaps = 1/279 (0%)
 Frame = +3

Query: 57  MSQISWNLQRFRYLLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFSNHFIILYSKCGRLA 236
           M+Q SW LQ FR +LKS IA ++LL GK+L T+Y+KSLIP STY SNHFI+LYSKC  L 
Sbjct: 1   MTQFSWTLQSFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLT 60

Query: 237 SARKAFDYTQYPNVFSFNAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGE 416
           +A  AF+ T  PNVFSFNA+I+AYAKES I +AH LFD+IPQPDLVS+NTLI+ YAD G+
Sbjct: 61  TAHHAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGD 120

Query: 417 SALVLQLFSEMREMGLDMDGFTLSGAITASCDDVDLIKQIHSVAVSAGFDSYVSVGNALV 596
           +   L LF EMREMGL MDGFT SG ITA C+ V LI+Q+HS+A S+GFDSYVSV N+L+
Sbjct: 121 TLSALSLFGEMREMGLVMDGFTFSGVITACCNHVGLIRQLHSLAFSSGFDSYVSVKNSLL 180

Query: 597 TYYSKNGFLEEAKRAFHEMG-VIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVD 773
           TYYSKNG LEEA+  F+ MG  ++DE+SWNSMIVAYGQH+ G KALA++++MV R   +D
Sbjct: 181 TYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEID 240

Query: 774 MFTLASVLTAFTCLEDLLGGLQFHAQLIKTGFHQNSHVG 890
           MFTLASVLT F+C+EDL GGLQFHA+ IKTGF++N HVG
Sbjct: 241 MFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVG 279



 Score = 90.5 bits (223), Expect = 8e-16
 Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 6/203 (2%)
 Frame = +3

Query: 288 NAIISAYAKESQIQIAHQLFDRIPQP--DLVSWNTLISGYADCGESALVLQLFSEMREMG 461
           N++++ Y+K   ++ A  +F+ + +   D VSWN++I  Y         L L+ +M   G
Sbjct: 177 NSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRG 236

Query: 462 LDMDGFTLSGAITA-SC-DDVDLIKQIHSVAVSAGFDSYVSVGNALVTYYSKNGF-LEEA 632
            ++D FTL+  +T  SC +D+    Q H+ A+  GF+    VG+ L+  Y+K G  + E+
Sbjct: 237 FEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSES 296

Query: 633 KRAFHEMGVIKDEISWNSMIVAYGQHREGS-KALAMFQEMVRRALNVDMFTLASVLTAFT 809
           ++ F E+    D + WN+MI  Y Q++E S +AL  F++M R     D  +    ++A +
Sbjct: 297 RKVFEEI-CGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACS 355

Query: 810 CLEDLLGGLQFHAQLIKTGFHQN 878
            L     G QFHA  +K+    N
Sbjct: 356 NLSSPSQGKQFHALAMKSEIPSN 378


>ref|XP_006358483.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Solanum tuberosum]
          Length = 720

 Score =  379 bits (974), Expect = e-103
 Identities = 185/272 (68%), Positives = 228/272 (83%)
 Frame = +3

Query: 75  NLQRFRYLLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFSNHFIILYSKCGRLASARKAF 254
           +LQ+FR++LK+ IA+R+LL GK+L TLYIKSLIPPSTYFSNHFI+LYSKCG L +AR+AF
Sbjct: 9   SLQQFRHILKTCIAQRDLLTGKSLHTLYIKSLIPPSTYFSNHFILLYSKCGLLTTARRAF 68

Query: 255 DYTQYPNVFSFNAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGESALVLQ 434
           + T  PNVFSFNAI++AYAKE+Q  +AHQLFD+IPQPD+VS+NTLIS YAD G +   L+
Sbjct: 69  EATPEPNVFSFNAILNAYAKEAQPHLAHQLFDKIPQPDIVSYNTLISAYADLGYTQPALR 128

Query: 435 LFSEMREMGLDMDGFTLSGAITASCDDVDLIKQIHSVAVSAGFDSYVSVGNALVTYYSKN 614
           LF ++++ GL MDGFTLS AITA+ D+VD I Q+HS+++SAG DSY SV N L+TYYSKN
Sbjct: 129 LFLDLKDTGLAMDGFTLSAAITAANDNVDFITQLHSLSISAGLDSYTSVNNTLITYYSKN 188

Query: 615 GFLEEAKRAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDMFTLASV 794
           G L+ A+  F  MG IKDE+SWNSMIVAYGQHREG KALA+++EM  R L +DMFTLASV
Sbjct: 189 GHLDYAREVFASMGEIKDEVSWNSMIVAYGQHREGIKALALYKEMELRDLYLDMFTLASV 248

Query: 795 LTAFTCLEDLLGGLQFHAQLIKTGFHQNSHVG 890
           LTA T +EDL GGLQFHA+LI+ GFH+N HVG
Sbjct: 249 LTALTSMEDLRGGLQFHARLIRMGFHENPHVG 280



 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 62/176 (35%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
 Frame = +3

Query: 288 NAIISAYAKESQ-IQIAHQLFDRIPQPDLVSWNTLISGYADCGESALVLQLFSEMREMGL 464
           + +I  Y+K S  I    ++F  IP PDLV WNT+ISGY+        +  F +M+  G 
Sbjct: 281 SGLIDLYSKCSGGISECKKVFQEIPYPDLVLWNTMISGYSQSDLCEEAVACFRQMQLAGH 340

Query: 465 DMDGFTLSGAITASCD--DVDLIKQIHSVAVSAGFDS-YVSVGNALVTYYSKNGFLEEAK 635
             D  +    I+AS +       KQIHS+A+ +   S  +SV NAL+  YSK G L++A+
Sbjct: 341 QPDDCSFVCVISASSNLSSPSQGKQIHSLAIKSSISSNRISVNNALIAMYSKCGSLQDAR 400

Query: 636 RAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDMFTLASVLTA 803
             F  M    + ++ NSMI  Y QH  G+++L +F  M+ R +     T  SVL++
Sbjct: 401 LLFDRMPE-HNAVTLNSMIAGYAQHGHGAESLLLFAWMLERNITPTNITFISVLSS 455



 Score = 91.7 bits (226), Expect = 4e-16
 Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 4/201 (1%)
 Frame = +3

Query: 288 NAIISAYAKESQIQIAHQLFDRIPQ-PDLVSWNTLISGYADCGESALVLQLFSEMREMGL 464
           N +I+ Y+K   +  A ++F  + +  D VSWN++I  Y    E    L L+ EM    L
Sbjct: 179 NTLITYYSKNGHLDYAREVFASMGEIKDEVSWNSMIVAYGQHREGIKALALYKEMELRDL 238

Query: 465 DMDGFTLSGAITA--SCDDVDLIKQIHSVAVSAGFDSYVSVGNALVTYYSK-NGFLEEAK 635
            +D FTL+  +TA  S +D+    Q H+  +  GF     VG+ L+  YSK +G + E K
Sbjct: 239 YLDMFTLASVLTALTSMEDLRGGLQFHARLIRMGFHENPHVGSGLIDLYSKCSGGISECK 298

Query: 636 RAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDMFTLASVLTAFTCL 815
           + F E+    D + WN+MI  Y Q     +A+A F++M       D  +   V++A + L
Sbjct: 299 KVFQEIPY-PDLVLWNTMISGYSQSDLCEEAVACFRQMQLAGHQPDDCSFVCVISASSNL 357

Query: 816 EDLLGGLQFHAQLIKTGFHQN 878
                G Q H+  IK+    N
Sbjct: 358 SSPSQGKQIHSLAIKSSISSN 378


>ref|XP_006466415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Citrus sinensis]
          Length = 718

 Score =  378 bits (970), Expect = e-102
 Identities = 179/278 (64%), Positives = 227/278 (81%)
 Frame = +3

Query: 57  MSQISWNLQRFRYLLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFSNHFIILYSKCGRLA 236
           M+Q SW LQ FR +LK+ +  R+L+ GK+L  LY+K+L+P S Y SNHFI+LYSKCG L+
Sbjct: 1   MNQNSWTLQTFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLS 60

Query: 237 SARKAFDYTQYPNVFSFNAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGE 416
           +A  AF+ TQ+ NVFSFN +++AYA++ +I  A QLFD+IPQPDLVS+NTLIS YADCG+
Sbjct: 61  AAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGD 120

Query: 417 SALVLQLFSEMREMGLDMDGFTLSGAITASCDDVDLIKQIHSVAVSAGFDSYVSVGNALV 596
           +   L LF +MRE   D DGFTLSG ITAS +++ LIKQ+H +A+  GFD Y SV N+L+
Sbjct: 121 TESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLL 180

Query: 597 TYYSKNGFLEEAKRAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDM 776
           TYYS+NGFL+EAKR F+EMG IKDE+SWNSM+VAYGQHREG +AL +FQEMVR  L +DM
Sbjct: 181 TYYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVRLQLGLDM 240

Query: 777 FTLASVLTAFTCLEDLLGGLQFHAQLIKTGFHQNSHVG 890
           +TLAS+LTAFT LEDL+GGLQFHA L+K+GFHQNSH+G
Sbjct: 241 YTLASILTAFTSLEDLVGGLQFHAHLVKSGFHQNSHIG 278



 Score = 93.6 bits (231), Expect = 9e-17
 Identities = 67/177 (37%), Positives = 99/177 (55%), Gaps = 5/177 (2%)
 Frame = +3

Query: 288 NAIISAYAKES-QIQIAHQLFDRIPQPDLVSWNTLISGYADCGE-SALVLQLFSEMREMG 461
           + +I  YAK S  ++   ++F+ I QPDLV WNT+ISGY+   E S   L  F ++ ++G
Sbjct: 279 SGLIDLYAKCSGDMRDCMKVFEEILQPDLVLWNTMISGYSQKEEYSEQALGCFKKLNQVG 338

Query: 462 LDMDGFTLSGAITASCDDV--DLIKQIHSVAVSAGFDS-YVSVGNALVTYYSKNGFLEEA 632
              D  +    I+A C ++   L KQIH++ +     S  +SV NALV  YSK G LE+A
Sbjct: 339 YHPDDCSFVCVISA-CSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 397

Query: 633 KRAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDMFTLASVLTA 803
           ++ F  M    + +S NSMI  Y QH  G +AL +F+ M+   +     T  SVL+A
Sbjct: 398 RQLFDRMPE-HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 453



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
 Frame = +3

Query: 288 NAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGESALVLQLFSEMREMGLD 467
           NA+++ Y+K   ++ A QLFDR+P+ + VS N++I+GYA  G     L+LF  M E  + 
Sbjct: 382 NALVAMYSKCGNLEDARQLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 441

Query: 468 MDGFTLSGAITASCDDVDLI----KQIHSVAVSAGFDSYVSVGNALVTYYSKNGFLEEAK 635
               T    ++A C     +    K    +    GF+      + ++    + G L +A+
Sbjct: 442 PTNITFVSVLSA-CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAE 500

Query: 636 RAFHEMGVIKDEISWNSMIVAYGQH 710
           R    M      I W S++ A   H
Sbjct: 501 RLIEAMPFNPGSIGWGSLLRACRTH 525


>ref|XP_002530602.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529850|gb|EEF31782.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 567

 Score =  375 bits (962), Expect = e-101
 Identities = 183/279 (65%), Positives = 222/279 (79%), Gaps = 1/279 (0%)
 Frame = +3

Query: 57  MSQISWNLQRFRYLLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFSNHFIILYSKCGRLA 236
           M QISW LQ FR+LLK  IA ++LL GK+L TLY+KSL+PPSTY SNHFIILYSKC RL 
Sbjct: 1   MHQISWTLQTFRHLLKECIANKDLLIGKSLYTLYLKSLLPPSTYLSNHFIILYSKCNRLT 60

Query: 237 SARKAFDYTQYPNVFSFNAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGE 416
            A  AF+    PNVFSFN ++ AYAK+S   IA  LFD+IPQPD +S+NTLI+ YADCG+
Sbjct: 61  LAHHAFNQNHEPNVFSFNVLLDAYAKKSLTHIARGLFDQIPQPDAISYNTLITAYADCGD 120

Query: 417 SALVLQLFSEMREMGLDMDGFTLSGAITASCDDVDLIKQIHSVAVSAGFDSYVSVGNALV 596
           S   L LF EMRE G+DMDG+TLSG ITA C+DV+LI+Q+H +A + G DSYVSV N+ V
Sbjct: 121 SLNALYLFREMRETGIDMDGYTLSGVITACCNDVNLIRQLHCLAGNYGLDSYVSVKNSFV 180

Query: 597 TYYSKNGFLEEAKRAFHEMGV-IKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVD 773
           TYY KNGFLEEA+R F+ + +  +D++SWN+MIVAYG+ REG KAL +FQEM  R ++VD
Sbjct: 181 TYYGKNGFLEEAERVFYGIEIENRDQVSWNTMIVAYGRQREGFKALKLFQEMTHRGIDVD 240

Query: 774 MFTLASVLTAFTCLEDLLGGLQFHAQLIKTGFHQNSHVG 890
           M+TLASVLTAFTCLEDL GG QFHA LIKTGF++N HVG
Sbjct: 241 MYTLASVLTAFTCLEDLFGGFQFHANLIKTGFYRNCHVG 279



 Score = 87.4 bits (215), Expect = 7e-15
 Identities = 64/203 (31%), Positives = 96/203 (47%), Gaps = 6/203 (2%)
 Frame = +3

Query: 288 NAIISAYAKESQIQIAHQLFD--RIPQPDLVSWNTLISGYADCGESALVLQLFSEMREMG 461
           N+ ++ Y K   ++ A ++F    I   D VSWNT+I  Y    E    L+LF EM   G
Sbjct: 177 NSFVTYYGKNGFLEEAERVFYGIEIENRDQVSWNTMIVAYGRQREGFKALKLFQEMTHRG 236

Query: 462 LDMDGFTLSGAITASCDDVDLIK--QIHSVAVSAGFDSYVSVGNALVTYYSK-NGFLEEA 632
           +D+D +TL+  +TA     DL    Q H+  +  GF     VG+ LV  Y+K  G + + 
Sbjct: 237 IDVDMYTLASVLTAFTCLEDLFGGFQFHANLIKTGFYRNCHVGSGLVDLYAKCGGGMLDC 296

Query: 633 KRAFHEMGVIKDEISWNSMIVAYGQHRE-GSKALAMFQEMVRRALNVDMFTLASVLTAFT 809
           ++ F E+    D + WN+MI AY    E   + L  F+ M R     D  +   V+ A +
Sbjct: 297 RKIFVEIRE-PDLVLWNTMISAYSLDEELSEETLDCFRRMQRAGFRPDDCSFVCVIRACS 355

Query: 810 CLEDLLGGLQFHAQLIKTGFHQN 878
            L     G Q HA  +K+    N
Sbjct: 356 NLSSPSQGKQIHAMTVKSEIPSN 378



 Score = 84.3 bits (207), Expect = 6e-14
 Identities = 63/185 (34%), Positives = 96/185 (51%), Gaps = 6/185 (3%)
 Frame = +3

Query: 267 YPNVFSFNAIISAYAKESQIQI-AHQLFDRIPQPDLVSWNTLISGYA-DCGESALVLQLF 440
           Y N    + ++  YAK     +   ++F  I +PDLV WNT+IS Y+ D   S   L  F
Sbjct: 273 YRNCHVGSGLVDLYAKCGGGMLDCRKIFVEIREPDLVLWNTMISAYSLDEELSEETLDCF 332

Query: 441 SEMREMGLDMDGFTLSGAITASCDDVDLI---KQIHSVAVSAGFDS-YVSVGNALVTYYS 608
             M+  G   D  +    I A C ++      KQIH++ V +   S  +SV NALV  YS
Sbjct: 333 RRMQRAGFRPDDCSFVCVIRA-CSNLSSPSQGKQIHAMTVKSEIPSNQISVNNALVAMYS 391

Query: 609 KNGFLEEAKRAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDMFTLA 788
           K G L++A+R F  M    + +S+NS+I  Y QH   +++L +F++M+   +     T  
Sbjct: 392 KCGNLQDARRLFDRMPE-HNTVSFNSIIAGYAQHGIKTESLCLFEQMLEIGIAPTRITFI 450

Query: 789 SVLTA 803
           SVL+A
Sbjct: 451 SVLSA 455


>ref|XP_004230390.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Solanum lycopersicum]
          Length = 720

 Score =  373 bits (958), Expect = e-101
 Identities = 181/272 (66%), Positives = 225/272 (82%)
 Frame = +3

Query: 75  NLQRFRYLLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFSNHFIILYSKCGRLASARKAF 254
           +LQ+FR++LK+ IA+R+L  GK+L TLYIK+LIPPSTYFSNHFI+LYSKCG L +AR+AF
Sbjct: 9   SLQQFRHILKTCIAQRDLFTGKSLHTLYIKALIPPSTYFSNHFILLYSKCGLLTAARRAF 68

Query: 255 DYTQYPNVFSFNAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGESALVLQ 434
           + T  PNVFSFNAI++AYAKE+Q  +AHQLFD+IPQPD+VS+NTLIS YAD G +   L+
Sbjct: 69  EATPEPNVFSFNAILNAYAKEAQPHLAHQLFDKIPQPDIVSYNTLISAYADLGYTLPALR 128

Query: 435 LFSEMREMGLDMDGFTLSGAITASCDDVDLIKQIHSVAVSAGFDSYVSVGNALVTYYSKN 614
           LF ++++ GL MDGFTLS AITA+ D+VD I Q+HS+++SAG DSY SV N L+TYY KN
Sbjct: 129 LFLDLKDTGLVMDGFTLSAAITAANDNVDFITQLHSLSISAGLDSYASVNNTLITYYGKN 188

Query: 615 GFLEEAKRAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDMFTLASV 794
           G L+ A+  F  MG IKDE+SWNSMIVAYGQHREG KALA+++EM  R L +DMFTLASV
Sbjct: 189 GHLDYAREVFASMGEIKDEVSWNSMIVAYGQHREGIKALALYKEMELRDLYLDMFTLASV 248

Query: 795 LTAFTCLEDLLGGLQFHAQLIKTGFHQNSHVG 890
           LTA T +EDL GGLQFH +LI+ GFH+N HVG
Sbjct: 249 LTALTSMEDLRGGLQFHGRLIRMGFHENPHVG 280



 Score = 90.1 bits (222), Expect = 1e-15
 Identities = 59/176 (33%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
 Frame = +3

Query: 288 NAIISAYAK-ESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGESALVLQLFSEMREMGL 464
           + +I  Y+K  + I    ++F  IP PDLV WNT+ISGY+        +  F +M+  G 
Sbjct: 281 SGLIDLYSKCSASISECKKVFQEIPYPDLVLWNTMISGYSQSELCEEAVACFRQMQLAGH 340

Query: 465 DMDGFTLSGAITASCD--DVDLIKQIHSVAVSAGFDS-YVSVGNALVTYYSKNGFLEEAK 635
             D  +    I+AS +       KQIHS+A+ +   S  +SV NAL+  YSK G +++A+
Sbjct: 341 QPDDCSFVCVISASSNLSSPSQGKQIHSLAIKSSIPSNRISVNNALIAMYSKCGSVQDAR 400

Query: 636 RAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDMFTLASVLTA 803
             F  M    + ++ NSMI  Y QH  G+++L +F  M+   +     T  SVL++
Sbjct: 401 LLFDRMPE-HNAVTLNSMIAGYAQHGHGTESLLLFAWMLESNIKPTNITFISVLSS 455



 Score = 89.4 bits (220), Expect = 2e-15
 Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 4/201 (1%)
 Frame = +3

Query: 288 NAIISAYAKESQIQIAHQLFDRIPQ-PDLVSWNTLISGYADCGESALVLQLFSEMREMGL 464
           N +I+ Y K   +  A ++F  + +  D VSWN++I  Y    E    L L+ EM    L
Sbjct: 179 NTLITYYGKNGHLDYAREVFASMGEIKDEVSWNSMIVAYGQHREGIKALALYKEMELRDL 238

Query: 465 DMDGFTLSGAITA--SCDDVDLIKQIHSVAVSAGFDSYVSVGNALVTYYSK-NGFLEEAK 635
            +D FTL+  +TA  S +D+    Q H   +  GF     VG+ L+  YSK +  + E K
Sbjct: 239 YLDMFTLASVLTALTSMEDLRGGLQFHGRLIRMGFHENPHVGSGLIDLYSKCSASISECK 298

Query: 636 RAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDMFTLASVLTAFTCL 815
           + F E+    D + WN+MI  Y Q     +A+A F++M       D  +   V++A + L
Sbjct: 299 KVFQEIPY-PDLVLWNTMISGYSQSELCEEAVACFRQMQLAGHQPDDCSFVCVISASSNL 357

Query: 816 EDLLGGLQFHAQLIKTGFHQN 878
                G Q H+  IK+    N
Sbjct: 358 SSPSQGKQIHSLAIKSSIPSN 378


>ref|XP_006426150.1| hypothetical protein CICLE_v10025015mg [Citrus clementina]
           gi|557528140|gb|ESR39390.1| hypothetical protein
           CICLE_v10025015mg [Citrus clementina]
          Length = 718

 Score =  371 bits (953), Expect = e-100
 Identities = 178/278 (64%), Positives = 224/278 (80%)
 Frame = +3

Query: 57  MSQISWNLQRFRYLLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFSNHFIILYSKCGRLA 236
           M Q SW LQ FR +LK+ +  R+L+ GK+L  LY+K+L+P S Y SNHFI+LYSKCG L+
Sbjct: 1   MIQNSWTLQTFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLS 60

Query: 237 SARKAFDYTQYPNVFSFNAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGE 416
           +A  AF+ TQ+ NVFSFN +++AYA++ +I  A QLFD+IPQPDLVS+NTLIS YADCG+
Sbjct: 61  AAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGD 120

Query: 417 SALVLQLFSEMREMGLDMDGFTLSGAITASCDDVDLIKQIHSVAVSAGFDSYVSVGNALV 596
           +   L LF +MRE   D DGFTLSG ITAS +++ LIKQ+H +A+  GFD Y SV N+L+
Sbjct: 121 TESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLL 180

Query: 597 TYYSKNGFLEEAKRAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDM 776
           T YS+NGFL+EAKR F+EMG IKDE+SWNSM+VAYGQHREG +AL +FQEMV   L +DM
Sbjct: 181 TCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM 240

Query: 777 FTLASVLTAFTCLEDLLGGLQFHAQLIKTGFHQNSHVG 890
           +TLAS+LTAFT LEDL+GGLQFHA LIK+GFHQNSH+G
Sbjct: 241 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG 278



 Score = 97.8 bits (242), Expect = 5e-18
 Identities = 69/177 (38%), Positives = 99/177 (55%), Gaps = 5/177 (2%)
 Frame = +3

Query: 288 NAIISAYAKES-QIQIAHQLFDRIPQPDLVSWNTLISGYADCGE-SALVLQLFSEMREMG 461
           + +I  YAK S  ++   ++F+ IPQPDLV WNT+ISGY+   E S   L  F ++  +G
Sbjct: 279 SGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG 338

Query: 462 LDMDGFTLSGAITASCDDV--DLIKQIHSVAVSAGFDS-YVSVGNALVTYYSKNGFLEEA 632
              D  +    I+A C ++   L KQIH++ +     S  +SV NALV  YSK G LE+A
Sbjct: 339 YHPDDCSFVCVISA-CSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 397

Query: 633 KRAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDMFTLASVLTA 803
           +R F  M    + +S NSMI  Y QH  G +AL +F+ M+   +     T  SVL+A
Sbjct: 398 RRLFDRMPE-HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 453



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 4/152 (2%)
 Frame = +3

Query: 288 NAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGESALVLQLFSEMREMGLD 467
           NA+++ Y+K   ++ A +LFDR+P+ + VS N++I+GYA  G     L+LF  M E  + 
Sbjct: 382 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 441

Query: 468 MDGFTLSGAITASCDDVDLI----KQIHSVAVSAGFDSYVSVGNALVTYYSKNGFLEEAK 635
               T    ++A C     +    K    +    GF+      + ++    + G L +A+
Sbjct: 442 PTNITFVSVLSA-CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAE 500

Query: 636 RAFHEMGVIKDEISWNSMIVAYGQHREGSKAL 731
           R    M      I W S++ A   H     AL
Sbjct: 501 RLIEAMPFNPGSIGWGSLLRACRTHGNMDLAL 532


>ref|XP_006404111.1| hypothetical protein EUTSA_v10010157mg [Eutrema salsugineum]
           gi|557105230|gb|ESQ45564.1| hypothetical protein
           EUTSA_v10010157mg [Eutrema salsugineum]
          Length = 721

 Score =  358 bits (919), Expect = 2e-96
 Identities = 172/278 (61%), Positives = 212/278 (76%)
 Frame = +3

Query: 57  MSQISWNLQRFRYLLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFSNHFIILYSKCGRLA 236
           M+      + FRY+L   +AER+L  GK+L  LY+KSLI  STY SNHF+ LYSKCGRL+
Sbjct: 1   MNNTPLTFKSFRYILLKCVAERDLFTGKSLHALYVKSLIASSTYLSNHFVNLYSKCGRLS 60

Query: 237 SARKAFDYTQYPNVFSFNAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGE 416
            AR AFD T+ PNVFS+N I+ AYAK+S+I IA QLFD IPQPD +S+NTLISGYAD  E
Sbjct: 61  YARAAFDSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTISYNTLISGYADARE 120

Query: 417 SALVLQLFSEMREMGLDMDGFTLSGAITASCDDVDLIKQIHSVAVSAGFDSYVSVGNALV 596
           +   + LF +MRE+G ++DGFTLSG I A CD VDLIKQ+H  +VS GFDSY SV NA V
Sbjct: 121 TVPAMILFKKMRELGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFV 180

Query: 597 TYYSKNGFLEEAKRAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDM 776
           TYYSKNGFL+EA   F+ M  ++DE+SWNSMIV YGQH+EG+KALA+++EM+ +   +DM
Sbjct: 181 TYYSKNGFLKEAVSVFYVMDELRDEVSWNSMIVVYGQHKEGAKALALYKEMILKGFKIDM 240

Query: 777 FTLASVLTAFTCLEDLLGGLQFHAQLIKTGFHQNSHVG 890
           +TL+SVL A T L  L+GG QFH  LIK GFHQNSHVG
Sbjct: 241 YTLSSVLNALTSLNHLIGGRQFHGMLIKAGFHQNSHVG 278



 Score = 92.0 bits (227), Expect = 3e-16
 Identities = 71/240 (29%), Positives = 118/240 (49%), Gaps = 4/240 (1%)
 Frame = +3

Query: 96  LLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFSNHFIILYSKCGRLASARKAFDYTQYPN 275
           +L +  +  +L+ G+    + IK+    +++  +  I LYSKCG                
Sbjct: 246 VLNALTSLNHLIGGRQFHGMLIKAGFHQNSHVGSGLIDLYSKCG---------------- 289

Query: 276 VFSFNAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGE-SALVLQLFSEMR 452
                     Y        + ++F  I  PDLV WNT+ISGY+   E S   ++ F +M+
Sbjct: 290 --------GRYGMSD----SEKVFREILFPDLVIWNTMISGYSLNEELSEEAVKSFRQMQ 337

Query: 453 EMGLDMDGFTLSGAITASCD--DVDLIKQIHSVAVSAGFDSY-VSVGNALVTYYSKNGFL 623
            +G   D  +    I+AS         KQIH +A+ +   S  +SV NAL++ Y KNG L
Sbjct: 338 RVGHRPDDCSFVCVISASSSLSSSSQGKQIHGLAIKSHIPSNRISVNNALISLYCKNGNL 397

Query: 624 EEAKRAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDMFTLASVLTA 803
           ++A+RAF  M  + + +S+N MI  Y QH   ++AL ++Q+M+   +  +  T  +VL+A
Sbjct: 398 KDARRAFDRMPEL-NVVSYNCMIKGYAQHGRVTEALLLYQQMLDSGIAPNKITFVAVLSA 456



 Score = 84.7 bits (208), Expect = 4e-14
 Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 7/204 (3%)
 Frame = +3

Query: 288 NAIISAYAKESQIQIAHQLFDRIPQ-PDLVSWNTLISGYADCGESALVLQLFSEMREMGL 464
           NA ++ Y+K   ++ A  +F  + +  D VSWN++I  Y    E A  L L+ EM   G 
Sbjct: 177 NAFVTYYSKNGFLKEAVSVFYVMDELRDEVSWNSMIVVYGQHKEGAKALALYKEMILKGF 236

Query: 465 DMDGFTLSGAITASCDDVDLI--KQIHSVAVSAGFDSYVSVGNALVTYYSKNG---FLEE 629
            +D +TLS  + A      LI  +Q H + + AGF     VG+ L+  YSK G    + +
Sbjct: 237 KIDMYTLSSVLNALTSLNHLIGGRQFHGMLIKAGFHQNSHVGSGLIDLYSKCGGRYGMSD 296

Query: 630 AKRAFHEMGVIKDEISWNSMIVAYGQHRE-GSKALAMFQEMVRRALNVDMFTLASVLTAF 806
           +++ F E+ +  D + WN+MI  Y  + E   +A+  F++M R     D  +   V++A 
Sbjct: 297 SEKVFREI-LFPDLVIWNTMISGYSLNEELSEEAVKSFRQMQRVGHRPDDCSFVCVISAS 355

Query: 807 TCLEDLLGGLQFHAQLIKTGFHQN 878
           + L     G Q H   IK+    N
Sbjct: 356 SSLSSSSQGKQIHGLAIKSHIPSN 379



 Score = 60.5 bits (145), Expect = 9e-07
 Identities = 37/158 (23%), Positives = 76/158 (48%), Gaps = 3/158 (1%)
 Frame = +3

Query: 288 NAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGESALVLQLFSEMREMGLD 467
           NA+IS Y K   ++ A + FDR+P+ ++VS+N +I GYA  G     L L+ +M + G+ 
Sbjct: 385 NALISLYCKNGNLKDARRAFDRMPELNVVSYNCMIKGYAQHGRVTEALLLYQQMLDSGIA 444

Query: 468 MDGFTLSGAITASCDDVDLI---KQIHSVAVSAGFDSYVSVGNALVTYYSKNGFLEEAKR 638
            +  T    ++A      +    +  +++  +   +      + ++    + G LEEA+R
Sbjct: 445 PNKITFVAVLSACVHSGKVAEGQRYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAER 504

Query: 639 AFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMV 752
               M      ++W +++ A  +H+  + A     E++
Sbjct: 505 FIDAMPFKPGSVAWAALLNACRKHKNMALAERAANELM 542


>ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297321830|gb|EFH52251.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 721

 Score =  357 bits (916), Expect = 3e-96
 Identities = 173/278 (62%), Positives = 210/278 (75%)
 Frame = +3

Query: 57  MSQISWNLQRFRYLLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFSNHFIILYSKCGRLA 236
           M+Q  W  + FR LL   +AER+L  GK+L  LY+KS++  STY SNHF+ LYSKCG L+
Sbjct: 1   MNQTQWKFKSFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLS 60

Query: 237 SARKAFDYTQYPNVFSFNAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGE 416
            AR AFD T+ PNVFS+N I+ AYAK+S+I IA QLFD  PQPD VS+NTLISGYAD  E
Sbjct: 61  YARAAFDSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARE 120

Query: 417 SALVLQLFSEMREMGLDMDGFTLSGAITASCDDVDLIKQIHSVAVSAGFDSYVSVGNALV 596
           +   + LF  MRE+G ++DGFTLSG I A CD VDLIKQ+H  AVS GFDSY SV NA V
Sbjct: 121 TVAAMVLFKRMRELGFEVDGFTLSGLIAACCDRVDLIKQLHCFAVSGGFDSYSSVNNAFV 180

Query: 597 TYYSKNGFLEEAKRAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDM 776
           TYYSK G L EA   F+ M  ++DE+SWNSMIVAYGQH+EG+KALA+++EM+ +   +DM
Sbjct: 181 TYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDM 240

Query: 777 FTLASVLTAFTCLEDLLGGLQFHAQLIKTGFHQNSHVG 890
           FTLASVL A T L+ L+GG QFH +LIK GFHQNSHVG
Sbjct: 241 FTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVG 278



 Score = 88.6 bits (218), Expect = 3e-15
 Identities = 55/162 (33%), Positives = 94/162 (58%), Gaps = 5/162 (3%)
 Frame = +3

Query: 333 AHQLFDRIPQPDLVSWNTLISGYADCGE-SALVLQLFSEMREMGLDMDGFTLSGAITASC 509
           + ++F  I  PDLV WNT+ISGY+   E S   ++ F +M+ +G   D  +    +T++C
Sbjct: 297 SEKVFQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFV-CVTSAC 355

Query: 510 DDVDLI---KQIHSVAVSAGFDS-YVSVGNALVTYYSKNGFLEEAKRAFHEMGVIKDEIS 677
            ++      KQIH +A+ +   S  +SV NAL++ Y K+G L +A+R F  M  + + +S
Sbjct: 356 SNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPEL-NAVS 414

Query: 678 WNSMIVAYGQHREGSKALAMFQEMVRRALNVDMFTLASVLTA 803
           +N MI  Y QH  G++AL ++Q M+   +  +  T  ++L+A
Sbjct: 415 FNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSA 456



 Score = 84.3 bits (207), Expect = 6e-14
 Identities = 63/204 (30%), Positives = 100/204 (49%), Gaps = 7/204 (3%)
 Frame = +3

Query: 288 NAIISAYAKESQIQIAHQLFDRIPQ-PDLVSWNTLISGYADCGESALVLQLFSEMREMGL 464
           NA ++ Y+K   ++ A  +F  +    D VSWN++I  Y    E A  L L+ EM   G 
Sbjct: 177 NAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGF 236

Query: 465 DMDGFTLSGAITA--SCDDVDLIKQIHSVAVSAGFDSYVSVGNALVTYYSKNG---FLEE 629
            +D FTL+  + A  S D +   +Q H   + AGF     VG+ L+ +YSK G    + +
Sbjct: 237 KIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSD 296

Query: 630 AKRAFHEMGVIKDEISWNSMIVAYGQHREGS-KALAMFQEMVRRALNVDMFTLASVLTAF 806
           +++ F E+ +  D + WN+MI  Y  + E S +A+  F++M R     D  +   V +A 
Sbjct: 297 SEKVFQEI-LSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSAC 355

Query: 807 TCLEDLLGGLQFHAQLIKTGFHQN 878
           + L     G Q H   IK+    N
Sbjct: 356 SNLSSPSQGKQIHGLAIKSNIPSN 379



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
 Frame = +3

Query: 288 NAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGESALVLQLFSEMREMGLD 467
           NA+IS Y K   +  A ++FDR+P+ + VS+N +I GYA  G     L+L+  M + G+ 
Sbjct: 385 NALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIA 444

Query: 468 MDGFTLSGAIT--ASCDDVDL-IKQIHSVAVSAGFDSYVSVGNALVTYYSKNGFLEEAKR 638
            +  T    ++  A C  VD   K  +++  +   +      + ++    + G LEEA+R
Sbjct: 445 PNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAER 504

Query: 639 AFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMV 752
               M      ++W +++ A  +H+  + A    +E++
Sbjct: 505 FIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELM 542


>ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  357 bits (915), Expect = 4e-96
 Identities = 179/278 (64%), Positives = 219/278 (78%)
 Frame = +3

Query: 57  MSQISWNLQRFRYLLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFSNHFIILYSKCGRLA 236
           M   S  L  FR  LK+ IA R+L  GK+L  LYIKS +P STY SNHF++LYSKC RL+
Sbjct: 1   MHHFSSLLHNFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLS 60

Query: 237 SARKAFDYTQYPNVFSFNAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGE 416
           +AR+ FD+T   NVFSFN +ISAYAKES +++AHQLFD +PQPD VS+NTLI+ YA  G+
Sbjct: 61  AARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGD 120

Query: 417 SALVLQLFSEMREMGLDMDGFTLSGAITASCDDVDLIKQIHSVAVSAGFDSYVSVGNALV 596
           +    QLF EMRE  LDMDGFTLSG ITA   +V LI+Q+H+++V  G DSYVSVGNAL+
Sbjct: 121 TQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALI 180

Query: 597 TYYSKNGFLEEAKRAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDM 776
           T YSKNGFL+EA+R FH +   +DE+SWNSM+VAY QHREGSKAL ++ EM  R L VD+
Sbjct: 181 TSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDI 240

Query: 777 FTLASVLTAFTCLEDLLGGLQFHAQLIKTGFHQNSHVG 890
           FTLASVLTAFT ++DLLGGLQFHA+LIK+G+HQNSHVG
Sbjct: 241 FTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVG 278



 Score = 91.7 bits (226), Expect = 4e-16
 Identities = 77/244 (31%), Positives = 113/244 (46%), Gaps = 8/244 (3%)
 Frame = +3

Query: 96  LLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFSNHFIILYSKCGR-LASARKAFDYTQYP 272
           +L +F   ++LL G       IKS    +++  +  I LYSKCG  +   RK        
Sbjct: 246 VLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRK-------- 297

Query: 273 NVFSFNAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYA---DCGESALVLQLFS 443
                                  +FD I  PDLV WNT+ISGY+   D  + AL  + F 
Sbjct: 298 -----------------------VFDEISNPDLVLWNTMISGYSLYEDLSDEAL--ECFR 332

Query: 444 EMREMGLDMDGFTLSGAITASCDDVDLI---KQIHSVAVSAGFDSY-VSVGNALVTYYSK 611
           +++ +G   D  +L   I+A C ++      +Q+H +A+     S  +SV NAL+  YSK
Sbjct: 333 QLQVVGHRPDDCSLVCVISA-CSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSK 391

Query: 612 NGFLEEAKRAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDMFTLAS 791
            G L +AK  F  M    + +S+NSMI  Y QH  G ++L +FQ M+         T  S
Sbjct: 392 CGNLRDAKTLFDTMPE-HNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFIS 450

Query: 792 VLTA 803
           VL A
Sbjct: 451 VLAA 454


>ref|XP_006292229.1| hypothetical protein CARUB_v10018435mg [Capsella rubella]
           gi|482560936|gb|EOA25127.1| hypothetical protein
           CARUB_v10018435mg [Capsella rubella]
          Length = 721

 Score =  356 bits (914), Expect = 6e-96
 Identities = 174/278 (62%), Positives = 211/278 (75%)
 Frame = +3

Query: 57  MSQISWNLQRFRYLLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFSNHFIILYSKCGRLA 236
           M+Q  W  + FR LL   +AER+L  GKTL  LY+KS++  STY SNHF+ LYSKCG L+
Sbjct: 1   MNQTPWKFKSFRDLLLKSVAERDLFTGKTLHGLYVKSIVASSTYLSNHFVNLYSKCGCLS 60

Query: 237 SARKAFDYTQYPNVFSFNAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGE 416
            A+ AFD T+ PNVFS+N I+ AYAK+S+I IA QLFD IPQPD VS+NTLISGYAD  E
Sbjct: 61  YAKAAFDSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARE 120

Query: 417 SALVLQLFSEMREMGLDMDGFTLSGAITASCDDVDLIKQIHSVAVSAGFDSYVSVGNALV 596
           +   + LF  MRE+G ++DGFTLSG I A CD V LIKQ+H  AVS GFDSY SV NA V
Sbjct: 121 TVAAMVLFIRMRELGFEVDGFTLSGLIAACCDRVGLIKQLHCFAVSGGFDSYSSVNNAFV 180

Query: 597 TYYSKNGFLEEAKRAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDM 776
           TYYSK G L+EA   F+ M  I+DE+SWNSMIVAYGQH+EG+KALA+++EM+ +   +DM
Sbjct: 181 TYYSKGGLLKEAVSVFYGMDEIRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDM 240

Query: 777 FTLASVLTAFTCLEDLLGGLQFHAQLIKTGFHQNSHVG 890
           FTLASVL A T L+ L+GG QFH +LIK GFHQNSHVG
Sbjct: 241 FTLASVLNALTSLDYLIGGRQFHCKLIKAGFHQNSHVG 278



 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 57/160 (35%), Positives = 95/160 (59%), Gaps = 5/160 (3%)
 Frame = +3

Query: 339 QLFDRIPQPDLVSWNTLISGYADCGE-SALVLQLFSEMREMGLDMDGFTLSGAITASCDD 515
           ++F  I  PDLV WNT+ISGY+   E S   ++ F +M+ +G   D  +    +T++C +
Sbjct: 299 KVFQEILSPDLVLWNTMISGYSMNEELSEEAVKSFIQMQRIGHRPDDCSFV-CVTSACSN 357

Query: 516 VDLI---KQIHSVAVSAGFDSY-VSVGNALVTYYSKNGFLEEAKRAFHEMGVIKDEISWN 683
           +      KQIH +A+ +   S  +SV NAL++ Y KNG L++A+R F  M   ++ +S+N
Sbjct: 358 LSSPSQGKQIHGLAIKSHIPSNRISVNNALISLYYKNGNLQDARRVFDRMPE-RNVVSYN 416

Query: 684 SMIVAYGQHREGSKALAMFQEMVRRALNVDMFTLASVLTA 803
            MI  Y QH  G++AL ++Q+M+   +  +  T  +VL+A
Sbjct: 417 CMIKGYAQHGHGTEALHLYQQMLNSGIAPNNITFVAVLSA 456



 Score = 82.4 bits (202), Expect = 2e-13
 Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 7/204 (3%)
 Frame = +3

Query: 288 NAIISAYAKESQIQIAHQLFDRIPQ-PDLVSWNTLISGYADCGESALVLQLFSEMREMGL 464
           NA ++ Y+K   ++ A  +F  + +  D VSWN++I  Y    E A  L L+ EM   G 
Sbjct: 177 NAFVTYYSKGGLLKEAVSVFYGMDEIRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGF 236

Query: 465 DMDGFTLSGAITA--SCDDVDLIKQIHSVAVSAGFDSYVSVGNALVTYYSKNG---FLEE 629
            +D FTL+  + A  S D +   +Q H   + AGF     VG+ L+ +YSK G    + E
Sbjct: 237 KIDMFTLASVLNALTSLDYLIGGRQFHCKLIKAGFHQNSHVGSGLIDFYSKCGGRHGMSE 296

Query: 630 AKRAFHEMGVIKDEISWNSMIVAYGQHRE-GSKALAMFQEMVRRALNVDMFTLASVLTAF 806
            ++ F E+ +  D + WN+MI  Y  + E   +A+  F +M R     D  +   V +A 
Sbjct: 297 CEKVFQEI-LSPDLVLWNTMISGYSMNEELSEEAVKSFIQMQRIGHRPDDCSFVCVTSAC 355

Query: 807 TCLEDLLGGLQFHAQLIKTGFHQN 878
           + L     G Q H   IK+    N
Sbjct: 356 SNLSSPSQGKQIHGLAIKSHIPSN 379



 Score = 67.8 bits (164), Expect = 5e-09
 Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
 Frame = +3

Query: 288 NAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGESALVLQLFSEMREMGLD 467
           NA+IS Y K   +Q A ++FDR+P+ ++VS+N +I GYA  G     L L+ +M   G+ 
Sbjct: 385 NALISLYYKNGNLQDARRVFDRMPERNVVSYNCMIKGYAQHGHGTEALHLYQQMLNSGIA 444

Query: 468 MDGFTLSGAIT--ASCDDVDL-IKQIHSVAVSAGFDSYVSVGNALVTYYSKNGFLEEAKR 638
            +  T    ++  A C  VD   K  +++      +  V   + ++    + G LEEA+R
Sbjct: 445 PNNITFVAVLSACAHCGKVDEGQKYFNTMKEIFKIEPEVEHYSCMIDLLGRAGKLEEAER 504

Query: 639 AFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMV 752
               M      ++W +++ A  +H+  + A     E++
Sbjct: 505 FIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELM 542


>ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  356 bits (914), Expect = 6e-96
 Identities = 179/278 (64%), Positives = 219/278 (78%)
 Frame = +3

Query: 57  MSQISWNLQRFRYLLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFSNHFIILYSKCGRLA 236
           M   S  L  FR  LK+ IA R+L  GK+L  LYIKS +P STY SNHF++LYSKC RL+
Sbjct: 1   MHHFSSLLHSFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLS 60

Query: 237 SARKAFDYTQYPNVFSFNAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGE 416
           +AR+ FD+T   NVFSFN +ISAYAKES +++AHQLFD +PQPD VS+NTLI+ YA  G+
Sbjct: 61  AARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGD 120

Query: 417 SALVLQLFSEMREMGLDMDGFTLSGAITASCDDVDLIKQIHSVAVSAGFDSYVSVGNALV 596
           +    QLF EMRE  LDMDGFTLSG ITA   +V LI+Q+H+++V  G DSYVSVGNAL+
Sbjct: 121 TQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALI 180

Query: 597 TYYSKNGFLEEAKRAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDM 776
           T YSKNGFL+EA+R FH +   +DE+SWNSM+VAY QHREGSKAL ++ EM  R L VD+
Sbjct: 181 TSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDI 240

Query: 777 FTLASVLTAFTCLEDLLGGLQFHAQLIKTGFHQNSHVG 890
           FTLASVLTAFT ++DLLGGLQFHA+LIK+G+HQNSHVG
Sbjct: 241 FTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVG 278



 Score = 90.9 bits (224), Expect = 6e-16
 Identities = 77/244 (31%), Positives = 113/244 (46%), Gaps = 8/244 (3%)
 Frame = +3

Query: 96  LLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFSNHFIILYSKCGR-LASARKAFDYTQYP 272
           +L +F   ++LL G       IKS    +++  +  I LYSKCG  +   RK        
Sbjct: 246 VLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRK-------- 297

Query: 273 NVFSFNAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYA---DCGESALVLQLFS 443
                                  +FD I  PDLV WNT+ISGY+   D  + AL  + F 
Sbjct: 298 -----------------------VFDEISNPDLVLWNTMISGYSLYEDLSDEAL--ECFR 332

Query: 444 EMREMGLDMDGFTLSGAITASCDDVDLI---KQIHSVAVSAGFDSY-VSVGNALVTYYSK 611
           +++ +G   D  +L   I+A C ++      +Q+H +A+     S  +SV NAL+  YSK
Sbjct: 333 QLQGVGHRPDDCSLVCVISA-CSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSK 391

Query: 612 NGFLEEAKRAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDMFTLAS 791
            G L +AK  F  M    + +S+NSMI  Y QH  G ++L +FQ M+         T  S
Sbjct: 392 CGNLRDAKTLFDTMPE-HNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFIS 450

Query: 792 VLTA 803
           VL A
Sbjct: 451 VLAA 454


>ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g49710 gi|6723416|emb|CAB66909.1| putative protein
           [Arabidopsis thaliana] gi|332645058|gb|AEE78579.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 721

 Score =  356 bits (913), Expect = 8e-96
 Identities = 172/278 (61%), Positives = 211/278 (75%)
 Frame = +3

Query: 57  MSQISWNLQRFRYLLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFSNHFIILYSKCGRLA 236
           M+Q  W  + FR LL   +AER+L  GK+L  LY+KS++  STY SNHF+ LYSKCGRL+
Sbjct: 1   MNQTPWKFKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLS 60

Query: 237 SARKAFDYTQYPNVFSFNAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGE 416
            AR AF  T+ PNVFS+N I+ AYAK+S+I IA QLFD IPQPD VS+NTLISGYAD  E
Sbjct: 61  YARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARE 120

Query: 417 SALVLQLFSEMREMGLDMDGFTLSGAITASCDDVDLIKQIHSVAVSAGFDSYVSVGNALV 596
           +   + LF  MR++G ++DGFTLSG I A CD VDLIKQ+H  +VS GFDSY SV NA V
Sbjct: 121 TFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFV 180

Query: 597 TYYSKNGFLEEAKRAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDM 776
           TYYSK G L EA   F+ M  ++DE+SWNSMIVAYGQH+EG+KALA+++EM+ +   +DM
Sbjct: 181 TYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDM 240

Query: 777 FTLASVLTAFTCLEDLLGGLQFHAQLIKTGFHQNSHVG 890
           FTLASVL A T L+ L+GG QFH +LIK GFHQNSHVG
Sbjct: 241 FTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVG 278



 Score = 88.2 bits (217), Expect = 4e-15
 Identities = 55/162 (33%), Positives = 94/162 (58%), Gaps = 5/162 (3%)
 Frame = +3

Query: 333 AHQLFDRIPQPDLVSWNTLISGYADCGE-SALVLQLFSEMREMGLDMDGFTLSGAITASC 509
           + ++F  I  PDLV WNT+ISGY+   E S   ++ F +M+ +G   D  +    +T++C
Sbjct: 297 SEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFV-CVTSAC 355

Query: 510 DDV---DLIKQIHSVAVSAGFDS-YVSVGNALVTYYSKNGFLEEAKRAFHEMGVIKDEIS 677
            ++      KQIH +A+ +   S  +SV NAL++ Y K+G L++A+  F  M  + + +S
Sbjct: 356 SNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPEL-NAVS 414

Query: 678 WNSMIVAYGQHREGSKALAMFQEMVRRALNVDMFTLASVLTA 803
           +N MI  Y QH  G++AL ++Q M+   +  +  T  +VL+A
Sbjct: 415 FNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSA 456



 Score = 80.5 bits (197), Expect = 8e-13
 Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 7/204 (3%)
 Frame = +3

Query: 288 NAIISAYAKESQIQIAHQLFDRIPQ-PDLVSWNTLISGYADCGESALVLQLFSEMREMGL 464
           NA ++ Y+K   ++ A  +F  + +  D VSWN++I  Y    E A  L L+ EM   G 
Sbjct: 177 NAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGF 236

Query: 465 DMDGFTLSGAITA--SCDDVDLIKQIHSVAVSAGFDSYVSVGNALVTYYSKNGFLE---E 629
            +D FTL+  + A  S D +   +Q H   + AGF     VG+ L+ +YSK G  +   +
Sbjct: 237 KIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYD 296

Query: 630 AKRAFHEMGVIKDEISWNSMIVAYGQHRE-GSKALAMFQEMVRRALNVDMFTLASVLTAF 806
           +++ F E+ +  D + WN+MI  Y  + E   +A+  F++M R     D  +   V +A 
Sbjct: 297 SEKVFQEI-LSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSAC 355

Query: 807 TCLEDLLGGLQFHAQLIKTGFHQN 878
           + L       Q H   IK+    N
Sbjct: 356 SNLSSPSQCKQIHGLAIKSHIPSN 379



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 41/158 (25%), Positives = 77/158 (48%), Gaps = 3/158 (1%)
 Frame = +3

Query: 288 NAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGESALVLQLFSEMREMGLD 467
           NA+IS Y K   +Q A  +FDR+P+ + VS+N +I GYA  G     L L+  M + G+ 
Sbjct: 385 NALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIA 444

Query: 468 MDGFTLSGAIT--ASCDDVDLIKQ-IHSVAVSAGFDSYVSVGNALVTYYSKNGFLEEAKR 638
            +  T    ++  A C  VD  ++  +++  +   +      + ++    + G LEEA+R
Sbjct: 445 PNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAER 504

Query: 639 AFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMV 752
               M      ++W +++ A  +H+  + A     E++
Sbjct: 505 FIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELM 542


>ref|XP_007148494.1| hypothetical protein PHAVU_006G213400g [Phaseolus vulgaris]
           gi|561021717|gb|ESW20488.1| hypothetical protein
           PHAVU_006G213400g [Phaseolus vulgaris]
          Length = 722

 Score =  352 bits (902), Expect = 1e-94
 Identities = 171/275 (62%), Positives = 214/275 (77%), Gaps = 2/275 (0%)
 Frame = +3

Query: 72  WNLQRFRYLLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFSNHFIILYSKCGRLASARKA 251
           + +Q FR LLK+ IA+R+L+ GKTL  LY K LIPPSTY SNHF +LYSKCG L SA+ +
Sbjct: 7   FQVQTFRNLLKTCIAQRDLITGKTLHALYFKCLIPPSTYLSNHFTLLYSKCGSLHSAQIS 66

Query: 252 FDYTQYPNVFSFNAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISGYADCGESALVL 431
           F  TQ+PNVFS+N +I+AYAK S + +AHQLFD  PQPDLVS+NTLI+ YAD GE   VL
Sbjct: 67  FHLTQHPNVFSYNTLINAYAKHSLVHLAHQLFDETPQPDLVSYNTLIAAYADRGECGPVL 126

Query: 432 QLFSEMREMGLDMDGFTLSGAITASCDDVDLIKQIHSVAVSAGFDSYVSVGNALVTYYSK 611
           +LF E+RE+GL +DGFTLSG ITA  DDV L++Q+H   V  G+D Y SV NAL+  YS+
Sbjct: 127 RLFEEVRELGLGLDGFTLSGVITACGDDVVLLRQLHCFVVMCGYDCYASVNNALLACYSR 186

Query: 612 NGFLEEAKRAFHEMGV--IKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDMFTL 785
            GF  E KR F EMG   ++DE+SWN+MIVA GQHREG +A+ +F EMVR+ L VDMFT+
Sbjct: 187 KGFFNEGKRVFREMGEGGVRDEVSWNAMIVACGQHREGVEAVELFIEMVRKDLKVDMFTM 246

Query: 786 ASVLTAFTCLEDLLGGLQFHAQLIKTGFHQNSHVG 890
           ASVLTAFTC++DL+GG+QFH  ++KTGF+ NSHVG
Sbjct: 247 ASVLTAFTCVKDLVGGMQFHGMMVKTGFNGNSHVG 281



 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 7/243 (2%)
 Frame = +3

Query: 96  LLKSFIAERNLLKGKTLQTLYIKSLIPPSTYFSNHFIILYSKCGR-LASARKAFDYTQYP 272
           +L +F   ++L+ G     + +K+    +++  +  I LYSKC   +   RK        
Sbjct: 249 VLTAFTCVKDLVGGMQFHGMMVKTGFNGNSHVGSGLIDLYSKCAAGMVECRK-------- 300

Query: 273 NVFSFNAIISAYAKESQIQIAHQLFDRIPQPDLVSWNTLISG---YADCGESALVLQLFS 443
                                  +F+ I  PDLV WNT+ISG   Y D  E  L    F 
Sbjct: 301 -----------------------VFEEIHAPDLVLWNTMISGFSQYEDLSEDGL--WCFK 335

Query: 444 EMREMGLDMD--GFTLSGAITASCDDVDLIKQIHSVAVSAGFD-SYVSVGNALVTYYSKN 614
           EM+      D   F    ++ ++     + KQ+H++A+ +    + +SV NALV  YS+ 
Sbjct: 336 EMQRKDFRPDDCSFVCVTSVCSNLSSPSVGKQVHALAIKSDISYNRISVNNALVAMYSRC 395

Query: 615 GFLEEAKRAFHEMGVIKDEISWNSMIVAYGQHREGSKALAMFQEMVRRALNVDMFTLASV 794
           G + +A++ F  M    + +S NSMI  Y QH    ++L +F+ M+++ +  +  T  SV
Sbjct: 396 GNVHDARKVFDTMRE-HNTVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNSITFISV 454

Query: 795 LTA 803
           L+A
Sbjct: 455 LSA 457



 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 7/204 (3%)
 Frame = +3

Query: 288 NAIISAYAKESQIQIAHQLFDRIPQP---DLVSWNTLISGYADCGESALVLQLFSEMREM 458
           NA+++ Y+++       ++F  + +    D VSWN +I       E    ++LF EM   
Sbjct: 178 NALLACYSRKGFFNEGKRVFREMGEGGVRDEVSWNAMIVACGQHREGVEAVELFIEMVRK 237

Query: 459 GLDMDGFTLSGAITASCDDVDLI--KQIHSVAVSAGFDSYVSVGNALVTYYSK-NGFLEE 629
            L +D FT++  +TA     DL+   Q H + V  GF+    VG+ L+  YSK    + E
Sbjct: 238 DLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMVKTGFNGNSHVGSGLIDLYSKCAAGMVE 297

Query: 630 AKRAFHEMGVIKDEISWNSMIVAYGQHREGSK-ALAMFQEMVRRALNVDMFTLASVLTAF 806
            ++ F E+    D + WN+MI  + Q+ + S+  L  F+EM R+    D  +   V +  
Sbjct: 298 CRKVFEEIHA-PDLVLWNTMISGFSQYEDLSEDGLWCFKEMQRKDFRPDDCSFVCVTSVC 356

Query: 807 TCLEDLLGGLQFHAQLIKTGFHQN 878
           + L     G Q HA  IK+    N
Sbjct: 357 SNLSSPSVGKQVHALAIKSDISYN 380