BLASTX nr result
ID: Akebia22_contig00049809
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia22_contig00049809
(297 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Gl... 69 4e-20
gb|ABA95205.1| retrotransposon protein, putative, Ty1-copia subc... 67 4e-19
emb|CAN76841.1| hypothetical protein VITISV_004490 [Vitis vinifera] 67 5e-19
emb|CAN72447.1| hypothetical protein VITISV_027001 [Vitis vinifera] 68 6e-19
emb|CAN64073.1| hypothetical protein VITISV_038270 [Vitis vinifera] 65 1e-18
emb|CAN79140.1| hypothetical protein VITISV_040800 [Vitis vinifera] 73 1e-18
emb|CAN71183.1| hypothetical protein VITISV_033416 [Vitis vinifera] 64 1e-18
emb|CAN74609.1| hypothetical protein VITISV_029328 [Vitis vinifera] 67 1e-18
emb|CAN70298.1| hypothetical protein VITISV_001396 [Vitis vinifera] 69 4e-18
emb|CAN62045.1| hypothetical protein VITISV_040357 [Vitis vinifera] 65 5e-18
gb|AAK70633.1|AC091238_11 Putative gag-pol polyprotein [Oryza sa... 67 5e-18
ref|XP_007014159.1| Gag-protease-integrase-RT-RNaseH polyprotein... 67 5e-18
emb|CAN78069.1| hypothetical protein VITISV_032701 [Vitis vinifera] 63 6e-18
emb|CAN62509.1| hypothetical protein VITISV_039839 [Vitis vinifera] 66 6e-18
emb|CAN64450.1| hypothetical protein VITISV_023114 [Vitis vinifera] 65 7e-18
emb|CAN61695.1| hypothetical protein VITISV_029441 [Vitis vinifera] 63 8e-18
emb|CAN67331.1| hypothetical protein VITISV_010354 [Vitis vinifera] 67 9e-18
gb|AAD12997.1| gag-pol polyprotein [Zea mays] 63 1e-17
emb|CAE04259.3| OSJNBa0089N06.20 [Oryza sativa Japonica Group] 64 1e-17
gb|AAT69633.1| putative polyprotein [Oryza sativa Japonica Group] 64 1e-17
>dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
Length = 1321
Score = 68.6 bits (166), Expect(3) = 4e-20
Identities = 27/41 (65%), Positives = 35/41 (85%)
Frame = -2
Query: 218 EEMDLMAKNQIWDLVELPEGVKAIGCKWVYKTKRDSIGNVE 96
+EM M N++W+LVELP G KAIGCKWV+KTK+DS+GN+E
Sbjct: 821 DEMSSMQSNKVWNLVELPNGAKAIGCKWVFKTKKDSLGNIE 861
Score = 45.1 bits (105), Expect(3) = 4e-20
Identities = 23/31 (74%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Frame = -1
Query: 90 KARLVVKGFSQKEGIDYHETFFSIS-KDSFR 1
KARLV KGF+QKEGIDY ETF +S KDS R
Sbjct: 864 KARLVAKGFTQKEGIDYKETFSPVSKKDSLR 894
Score = 30.0 bits (66), Expect(3) = 4e-20
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 295 GIEDDPVTFS*AMSGNTSTSWYGAFK 218
G E+DP TF AMS S WY A K
Sbjct: 795 GAENDPETFDQAMSCKESNLWYDAMK 820
>gb|ABA95205.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1407
Score = 67.0 bits (162), Expect(3) = 4e-19
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = -2
Query: 218 EEMDLMAKNQIWDLVELPEGVKAIGCKWVYKTKRDSIGNVE 96
+EM M+ N++WDLVE+PEG K +GCKWVYKTKRD GN++
Sbjct: 903 DEMKSMSTNKVWDLVEIPEGAKTVGCKWVYKTKRDPKGNIK 943
Score = 45.8 bits (107), Expect(3) = 4e-19
Identities = 22/34 (64%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
Frame = -1
Query: 99 RMIKARLVVKGFSQKEGIDYHETFFSIS-KDSFR 1
+ K RLV KGF+Q+EGIDY+ETF +S KDSFR
Sbjct: 943 KRFKVRLVAKGFTQREGIDYNETFSPVSTKDSFR 976
Score = 27.3 bits (59), Expect(3) = 4e-19
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 292 IEDDPVTFS*AMSGNTSTSWYGAFK 218
+++DP++F AM G S+ W A K
Sbjct: 878 LDNDPISFKEAMKGEHSSEWLKAMK 902
>emb|CAN76841.1| hypothetical protein VITISV_004490 [Vitis vinifera]
Length = 906
Score = 67.4 bits (163), Expect(3) = 5e-19
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = -2
Query: 218 EEMDLMAKNQIWDLVELPEGVKAIGCKWVYKTKRDSIGNVE 96
+EM M N +WDLVELP GVK IGCKWV+KTK+DS GN+E
Sbjct: 682 DEMSSMRCNDVWDLVELPNGVKTIGCKWVFKTKKDSSGNIE 722
Score = 46.6 bits (109), Expect(3) = 5e-19
Identities = 24/31 (77%), Positives = 26/31 (83%), Gaps = 1/31 (3%)
Frame = -1
Query: 90 KARLVVKGFSQKEGIDYHETFFSIS-KDSFR 1
KARLV KGF+QKEGIDY ETF S+S KDS R
Sbjct: 725 KARLVAKGFTQKEGIDYTETFSSVSKKDSLR 755
Score = 25.8 bits (55), Expect(3) = 5e-19
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3
Query: 289 EDDPVTFS*AMSGNTSTSWYGAFK 218
E+DP +FS AMS WY A K
Sbjct: 658 ENDPESFSQAMSCKELELWYNAMK 681
>emb|CAN72447.1| hypothetical protein VITISV_027001 [Vitis vinifera]
Length = 1051
Score = 68.2 bits (165), Expect(3) = 6e-19
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = -2
Query: 218 EEMDLMAKNQIWDLVELPEGVKAIGCKWVYKTKRDSIGNV 99
EEM M N +WDLVELPEGVK IGCKW++KTKRDS GN+
Sbjct: 642 EEMKSMKDNGVWDLVELPEGVKPIGCKWIFKTKRDSKGNI 681
Score = 47.0 bits (110), Expect(3) = 6e-19
Identities = 23/31 (74%), Positives = 26/31 (83%), Gaps = 1/31 (3%)
Frame = -1
Query: 90 KARLVVKGFSQKEGIDYHETFFSI-SKDSFR 1
KARLV KGF+QKEG+DY ETF + SKDSFR
Sbjct: 685 KARLVAKGFTQKEGVDYKETFSPVSSKDSFR 715
Score = 24.3 bits (51), Expect(3) = 6e-19
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -3
Query: 295 GIEDDPVTFS*AMSGNTSTSWYGAFKK 215
G+ED+P++ S + S W A K+
Sbjct: 616 GLEDNPISVSQVKQSSNSEKWIEAMKE 642
>emb|CAN64073.1| hypothetical protein VITISV_038270 [Vitis vinifera]
Length = 1181
Score = 65.5 bits (158), Expect(3) = 1e-18
Identities = 27/40 (67%), Positives = 33/40 (82%)
Frame = -2
Query: 218 EEMDLMAKNQIWDLVELPEGVKAIGCKWVYKTKRDSIGNV 99
+EM M N +WDLVELP+GVK IGCKW++KTKRDS GN+
Sbjct: 677 DEMKSMKDNGVWDLVELPKGVKPIGCKWIFKTKRDSKGNI 716
Score = 47.4 bits (111), Expect(3) = 1e-18
Identities = 24/31 (77%), Positives = 26/31 (83%), Gaps = 1/31 (3%)
Frame = -1
Query: 90 KARLVVKGFSQKEGIDYHETFFSI-SKDSFR 1
KARLV KGF+QKEGIDY ETF + SKDSFR
Sbjct: 720 KARLVAKGFTQKEGIDYKETFSPVSSKDSFR 750
Score = 25.8 bits (55), Expect(3) = 1e-18
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 295 GIEDDPVTFS*AMSGNTSTSWYGAFK 218
G+EDDP++ S + S W A K
Sbjct: 651 GLEDDPISVSQVKQSSNSEKWIEAMK 676
>emb|CAN79140.1| hypothetical protein VITISV_040800 [Vitis vinifera]
Length = 135
Score = 72.8 bits (177), Expect(2) = 1e-18
Identities = 29/41 (70%), Positives = 37/41 (90%)
Frame = -2
Query: 218 EEMDLMAKNQIWDLVELPEGVKAIGCKWVYKTKRDSIGNVE 96
+EM+ MA NQ+WDLVELP+G K IGCKWV+KTKRDS+GN++
Sbjct: 3 DEMNSMANNQVWDLVELPKGAKVIGCKWVFKTKRDSLGNIK 43
Score = 45.8 bits (107), Expect(2) = 1e-18
Identities = 22/34 (64%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Frame = -1
Query: 99 RMIKARLVVKGFSQKEGIDYHETFFSIS-KDSFR 1
++ KARLV KGF+ +EGIDYH+TF +S KDSFR
Sbjct: 43 KIYKARLVAKGFTLQEGIDYHDTFSLVSKKDSFR 76
>emb|CAN71183.1| hypothetical protein VITISV_033416 [Vitis vinifera]
Length = 1255
Score = 63.5 bits (153), Expect(3) = 1e-18
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = -2
Query: 218 EEMDLMAKNQIWDLVELPEGVKAIGCKWVYKTKRDSIGNVE 96
+EM M N +WDLVEL GVK IGCKWV+KTK+DS GN+E
Sbjct: 919 DEMSSMXCNDVWDLVELLNGVKTIGCKWVFKTKKDSSGNIE 959
Score = 44.7 bits (104), Expect(3) = 1e-18
Identities = 23/31 (74%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Frame = -1
Query: 90 KARLVVKGFSQKEGIDYHETFFSIS-KDSFR 1
KARLV KGF+QKEGIDY ETF +S KDS R
Sbjct: 962 KARLVAKGFTQKEGIDYTETFSPVSKKDSLR 992
Score = 30.0 bits (66), Expect(3) = 1e-18
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -3
Query: 295 GIEDDPVTFS*AMSGNTSTSWYGAFK 218
G E+DP +FS AMS S WY A K
Sbjct: 893 GAENDPESFSQAMSCKESELWYNAMK 918
>emb|CAN74609.1| hypothetical protein VITISV_029328 [Vitis vinifera]
Length = 969
Score = 67.0 bits (162), Expect(3) = 1e-18
Identities = 27/41 (65%), Positives = 35/41 (85%)
Frame = -2
Query: 218 EEMDLMAKNQIWDLVELPEGVKAIGCKWVYKTKRDSIGNVE 96
+EM+ MA N +W+LVELP G KAIGCKWV+KT +DS+GN+E
Sbjct: 642 DEMNSMASNGVWNLVELPGGAKAIGCKWVFKTNKDSLGNIE 682
Score = 42.4 bits (98), Expect(3) = 1e-18
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -1
Query: 90 KARLVVKGFSQKEGIDYHETFFSISK 13
KARL+ KGF+Q EGIDY+ETF +SK
Sbjct: 685 KARLIAKGFTQNEGIDYNETFSPVSK 710
Score = 28.9 bits (63), Expect(3) = 1e-18
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 295 GIEDDPVTFS*AMSGNTSTSWYGAFK 218
G E+DP TFS A++ S WY A K
Sbjct: 616 GTENDPETFSQAINCKESNLWYDAMK 641
>emb|CAN70298.1| hypothetical protein VITISV_001396 [Vitis vinifera]
Length = 1507
Score = 68.9 bits (167), Expect(3) = 4e-18
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = -2
Query: 218 EEMDLMAKNQIWDLVELPEGVKAIGCKWVYKTKRDSIGNVE 96
+EM M N +WDLVELP G KAIGCKWV+KTK+DS+GN+E
Sbjct: 1420 DEMSSMRCNNVWDLVELPNGAKAIGCKWVFKTKKDSLGNIE 1460
Score = 42.4 bits (98), Expect(3) = 4e-18
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = -1
Query: 90 KARLVVKGFSQKEGIDYHETFFSISK 13
KARLV KGF+QKEGIDY +TF ISK
Sbjct: 1463 KARLVAKGFTQKEGIDYTKTFSPISK 1488
Score = 25.4 bits (54), Expect(3) = 4e-18
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -3
Query: 295 GIEDDPVTFS*AMSGNTSTSWYGAFK 218
G E+DP FS AM S WY A K
Sbjct: 1394 GAENDPEFFSQAMRCKESKLWYIAMK 1419
>emb|CAN62045.1| hypothetical protein VITISV_040357 [Vitis vinifera]
Length = 1290
Score = 65.5 bits (158), Expect(3) = 5e-18
Identities = 27/40 (67%), Positives = 33/40 (82%)
Frame = -2
Query: 218 EEMDLMAKNQIWDLVELPEGVKAIGCKWVYKTKRDSIGNV 99
+EM M N +WDLVELP+GVK IGCKW++KTKRDS GN+
Sbjct: 803 DEMKSMKDNGVWDLVELPKGVKPIGCKWIFKTKRDSKGNI 842
Score = 45.4 bits (106), Expect(3) = 5e-18
Identities = 23/31 (74%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Frame = -1
Query: 90 KARLVVKGFSQKEGIDYHETFFSI-SKDSFR 1
KARLV KGF+QKEGIDY E F + SKDSFR
Sbjct: 846 KARLVAKGFTQKEGIDYKENFSPVSSKDSFR 876
Score = 25.4 bits (54), Expect(3) = 5e-18
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 295 GIEDDPVTFS*AMSGNTSTSWYGAFK 218
G+EDDP++ S + S W A K
Sbjct: 777 GLEDDPISVSQVKQSSDSEKWIEAMK 802
>gb|AAK70633.1|AC091238_11 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|21321753|gb|AAM47288.1|AC122146_7 Putative gag-pol
polyprotein [Oryza sativa Japonica Group]
gi|31430568|gb|AAP52462.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1225
Score = 67.0 bits (162), Expect(3) = 5e-18
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = -2
Query: 218 EEMDLMAKNQIWDLVELPEGVKAIGCKWVYKTKRDSIGNVE 96
+EM M+ N++WDLVE+P+G K +GCKWVYKTKRD GN+E
Sbjct: 748 DEMKSMSTNKVWDLVEIPKGAKTVGCKWVYKTKRDPKGNIE 788
Score = 44.3 bits (103), Expect(3) = 5e-18
Identities = 22/31 (70%), Positives = 26/31 (83%), Gaps = 1/31 (3%)
Frame = -1
Query: 90 KARLVVKGFSQKEGIDYHETFFSIS-KDSFR 1
KA LV KGF+Q+EGIDY+ETF +S KDSFR
Sbjct: 791 KAGLVAKGFTQREGIDYNETFSPVSTKDSFR 821
Score = 25.0 bits (53), Expect(3) = 5e-18
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 292 IEDDPVTFS*AMSGNTSTSWYGAFK 218
+++DP++F AM S+ W A K
Sbjct: 723 LDNDPISFKEAMKSEHSSEWLKAMK 747
>ref|XP_007014159.1| Gag-protease-integrase-RT-RNaseH polyprotein [Theobroma cacao]
gi|508784522|gb|EOY31778.1|
Gag-protease-integrase-RT-RNaseH polyprotein [Theobroma
cacao]
Length = 410
Score = 67.0 bits (162), Expect(3) = 5e-18
Identities = 27/41 (65%), Positives = 35/41 (85%)
Frame = -2
Query: 218 EEMDLMAKNQIWDLVELPEGVKAIGCKWVYKTKRDSIGNVE 96
+EM+ MA N +W++VELP G KAIGCKWV+KTK DS+GN+E
Sbjct: 323 DEMNSMAFNGVWNIVELPNGAKAIGCKWVFKTKNDSLGNIE 363
Score = 43.1 bits (100), Expect(3) = 5e-18
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = -1
Query: 90 KARLVVKGFSQKEGIDYHETFFSISKDSF 4
KARL+ KGF QKEGIDY +TF+ +S SF
Sbjct: 366 KARLITKGFIQKEGIDYAKTFYPVSSISF 394
Score = 26.2 bits (56), Expect(3) = 5e-18
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 295 GIEDDPVTFS*AMSGNTSTSWYGAFK 218
G+++D TFS MS S WY A K
Sbjct: 297 GVKNDLETFSQVMSCKESKLWYNAMK 322
>emb|CAN78069.1| hypothetical protein VITISV_032701 [Vitis vinifera]
Length = 1381
Score = 62.8 bits (151), Expect(3) = 6e-18
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = -2
Query: 218 EEMDLMAKNQIWDLVELPEGVKAIGCKWVYKTKRDSIGNV 99
+EM M N +WDLVELP+ VK IGCKW++KTKRDS GN+
Sbjct: 897 DEMKSMKDNGVWDLVELPKXVKPIGCKWIFKTKRDSKGNI 936
Score = 47.4 bits (111), Expect(3) = 6e-18
Identities = 24/31 (77%), Positives = 26/31 (83%), Gaps = 1/31 (3%)
Frame = -1
Query: 90 KARLVVKGFSQKEGIDYHETFFSI-SKDSFR 1
KARLV KGF+QKEGIDY ETF + SKDSFR
Sbjct: 940 KARLVAKGFTQKEGIDYKETFSPVSSKDSFR 970
Score = 25.8 bits (55), Expect(3) = 6e-18
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 295 GIEDDPVTFS*AMSGNTSTSWYGAFK 218
G+EDDP++ S + S W A K
Sbjct: 871 GLEDDPISVSQVKQSSNSEKWIEAMK 896
>emb|CAN62509.1| hypothetical protein VITISV_039839 [Vitis vinifera]
Length = 1154
Score = 66.2 bits (160), Expect(3) = 6e-18
Identities = 26/46 (56%), Positives = 37/46 (80%)
Frame = -2
Query: 233 VWCL*EEMDLMAKNQIWDLVELPEGVKAIGCKWVYKTKRDSIGNVE 96
++ + EE+ M N++WDLVELP+G+K IGCKW++KTK DS GNV+
Sbjct: 373 LYAMEEELKSMKDNEVWDLVELPKGIKTIGCKWIFKTKHDSKGNVK 418
Score = 44.7 bits (104), Expect(3) = 6e-18
Identities = 22/31 (70%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Frame = -1
Query: 90 KARLVVKGFSQKEGIDYHETFFSIS-KDSFR 1
KARLV KG++QKEG DY ETFF +S KDS R
Sbjct: 421 KARLVAKGYTQKEGSDYKETFFPVSKKDSLR 451
Score = 25.0 bits (53), Expect(3) = 6e-18
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -3
Query: 295 GIEDDPVTFS*AMSGNTSTSWYGAFKK 215
G+E DP +++ A++ ST W A ++
Sbjct: 352 GLESDPTSYNQAINSENSTLWLYAMEE 378
>emb|CAN64450.1| hypothetical protein VITISV_023114 [Vitis vinifera]
Length = 738
Score = 65.5 bits (158), Expect(3) = 7e-18
Identities = 27/40 (67%), Positives = 33/40 (82%)
Frame = -2
Query: 218 EEMDLMAKNQIWDLVELPEGVKAIGCKWVYKTKRDSIGNV 99
+EM M N +WDLVELP+GVK IGCKW++KTKRDS GN+
Sbjct: 391 DEMKSMKDNGVWDLVELPKGVKPIGCKWIFKTKRDSKGNI 430
Score = 44.7 bits (104), Expect(3) = 7e-18
Identities = 23/31 (74%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Frame = -1
Query: 90 KARLVVKGFSQKEGIDYHETFFSI-SKDSFR 1
KARLV KGF+QKE IDY ETF + SKDSFR
Sbjct: 434 KARLVAKGFTQKEXIDYKETFSPVSSKDSFR 464
Score = 25.8 bits (55), Expect(3) = 7e-18
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 295 GIEDDPVTFS*AMSGNTSTSWYGAFK 218
G+EDDP++ S + S W A K
Sbjct: 365 GLEDDPISVSQVKQSSNSEKWIEAMK 390
>emb|CAN61695.1| hypothetical protein VITISV_029441 [Vitis vinifera]
Length = 1581
Score = 63.2 bits (152), Expect(3) = 8e-18
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = -2
Query: 218 EEMDLMAKNQIWDLVELPEGVKAIGCKWVYKTKRDSIGNV 99
+EM M N +WDLVELP+GVK IGCKW++KTK DS GN+
Sbjct: 1096 DEMKSMKDNGVWDLVELPKGVKPIGCKWIFKTKXDSKGNI 1135
Score = 47.4 bits (111), Expect(3) = 8e-18
Identities = 24/31 (77%), Positives = 26/31 (83%), Gaps = 1/31 (3%)
Frame = -1
Query: 90 KARLVVKGFSQKEGIDYHETFFSI-SKDSFR 1
KARLV KGF+QKEGIDY ETF + SKDSFR
Sbjct: 1139 KARLVAKGFTQKEGIDYKETFSPVSSKDSFR 1169
Score = 25.0 bits (53), Expect(3) = 8e-18
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -3
Query: 295 GIEDDPVTFS*AMSGNTSTSWYGAFK 218
G+E+DP++ S + S W A K
Sbjct: 1070 GLEBDPISVSQVKQSSNSEKWIEAMK 1095
>emb|CAN67331.1| hypothetical protein VITISV_010354 [Vitis vinifera]
Length = 490
Score = 66.6 bits (161), Expect(3) = 9e-18
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = -2
Query: 215 EMDLMAKNQIWDLVELPEGVKAIGCKWVYKTKRDSIGNVE 96
EM M N +WDLVELP G KAIGCKWV KTK+DS+GN+E
Sbjct: 190 EMSSMRCNDVWDLVELPNGAKAIGCKWVLKTKKDSLGNIE 229
Score = 38.9 bits (89), Expect(3) = 9e-18
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = -1
Query: 90 KARLVVKGFSQKEGIDYHETFFSISKDSF 4
KA+L+ K F+QKEGI+Y ETF +SK F
Sbjct: 232 KAKLIAKRFTQKEGINYTETFSPVSKKDF 260
Score = 30.0 bits (66), Expect(3) = 9e-18
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -3
Query: 295 GIEDDPVTFS*AMSGNTSTSWYGAFK 218
G E+DP +FS AMS S WY A K
Sbjct: 163 GAENDPKSFSQAMSCKESKLWYNAMK 188
>gb|AAD12997.1| gag-pol polyprotein [Zea mays]
Length = 1406
Score = 62.8 bits (151), Expect(3) = 1e-17
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = -2
Query: 218 EEMDLMAKNQIWDLVELPEGVKAIGCKWVYKTKRDSIGNVE 96
+E++ M N++WDL +P G K +GCKWVYKTKRDS GN+E
Sbjct: 906 DELESMRMNKVWDLEVIPHGAKTVGCKWVYKTKRDSRGNIE 946
Score = 49.7 bits (117), Expect(3) = 1e-17
Identities = 24/31 (77%), Positives = 27/31 (87%), Gaps = 1/31 (3%)
Frame = -1
Query: 90 KARLVVKGFSQKEGIDYHETFFSIS-KDSFR 1
KARLV KGF+Q+EGIDYHETF +S KDSFR
Sbjct: 949 KARLVAKGFTQREGIDYHETFSPVSTKDSFR 979
Score = 22.7 bits (47), Expect(3) = 1e-17
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 289 EDDPVTFS*AMSGNTSTSWYGAFK 218
E DP T+ AM S+ W A +
Sbjct: 882 EGDPTTYEAAMRSANSSKWLSAME 905
>emb|CAE04259.3| OSJNBa0089N06.20 [Oryza sativa Japonica Group]
Length = 1405
Score = 63.5 bits (153), Expect(3) = 1e-17
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = -2
Query: 218 EEMDLMAKNQIWDLVELPEGVKAIGCKWVYKTKRDSIGNVE 96
+EM+ M N +WDL E+P+G K +GCKWVYKTK DS GN+E
Sbjct: 907 DEMESMKLNDVWDLEEIPKGAKTVGCKWVYKTKYDSRGNIE 947
Score = 47.0 bits (110), Expect(3) = 1e-17
Identities = 23/31 (74%), Positives = 27/31 (87%), Gaps = 1/31 (3%)
Frame = -1
Query: 90 KARLVVKGFSQKEGIDYHETFFSIS-KDSFR 1
KARLV KGF+Q+EGIDY+ETF +S KDSFR
Sbjct: 950 KARLVAKGFTQREGIDYNETFSPVSCKDSFR 980
Score = 24.6 bits (52), Expect(3) = 1e-17
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 292 IEDDPVTFS*AMSGNTSTSWYGAFK 218
+EDDP ++ AM S+ W A K
Sbjct: 882 MEDDPTSYEEAMRSARSSEWLEAMK 906
>gb|AAT69633.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1358
Score = 63.5 bits (153), Expect(3) = 1e-17
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = -2
Query: 218 EEMDLMAKNQIWDLVELPEGVKAIGCKWVYKTKRDSIGNVE 96
+EM+ M N +WDL E+P+G K +GCKWVYKTK DS GN+E
Sbjct: 860 DEMESMKLNDVWDLEEIPKGAKTVGCKWVYKTKYDSRGNIE 900
Score = 47.0 bits (110), Expect(3) = 1e-17
Identities = 23/31 (74%), Positives = 27/31 (87%), Gaps = 1/31 (3%)
Frame = -1
Query: 90 KARLVVKGFSQKEGIDYHETFFSIS-KDSFR 1
KARLV KGF+Q+EGIDY+ETF +S KDSFR
Sbjct: 903 KARLVAKGFTQREGIDYNETFSPVSCKDSFR 933
Score = 24.6 bits (52), Expect(3) = 1e-17
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 292 IEDDPVTFS*AMSGNTSTSWYGAFK 218
+EDDP ++ AM S+ W A K
Sbjct: 835 MEDDPTSYEEAMRSARSSEWLEAMK 859