BLASTX nr result
ID: Akebia22_contig00044203
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia22_contig00044203
(739 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 275 1e-71
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera] 246 5e-63
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 243 5e-62
emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera] 239 6e-61
emb|CAN64002.1| hypothetical protein VITISV_023116 [Vitis vinifera] 233 7e-59
emb|CAN68623.1| hypothetical protein VITISV_010681 [Vitis vinifera] 230 3e-58
gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subc... 228 2e-57
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 224 2e-56
gb|AAP94600.1| putative copia-like retrotransposon Hopscotch pol... 223 4e-56
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 223 4e-56
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 222 9e-56
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 219 8e-55
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc... 219 8e-55
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 218 2e-54
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 218 2e-54
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group] 217 4e-54
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 215 1e-53
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 215 1e-53
ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624... 215 1e-53
gb|AAU90262.1| integrase core domain containing protein [Oryza s... 215 1e-53
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 275 bits (703), Expect = 1e-71
Identities = 120/171 (70%), Positives = 147/171 (85%)
Frame = +2
Query: 2 LGCPLKAIQTNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRHIVENGLTLLA 181
LG +KA+Q++W GE+R+F+ +L +GI HR+SCP H+QNGLAERKHRHIVE+G+ LLA
Sbjct: 622 LGHKIKAVQSDWGGEYRSFTQYLTSNGIIHRISCPYTHEQNGLAERKHRHIVEHGIALLA 681
Query: 182 QASMPLKYWDEAFRTSVFLINRLPTAVLSHRTPYEVLFHVKPDFSSLKVFDCLCFPNIKP 361
QAS+P KYWDEAFRTSV+LINRLPT VL +++P EVLFH KP +S LKVF C+C+PN++P
Sbjct: 682 QASLPFKYWDEAFRTSVYLINRLPTPVLKNKSPLEVLFHQKPSYSXLKVFGCMCYPNLRP 741
Query: 362 FNRHKLQFRSVPCTFLGYSLNHKGYKCLDPKGKIIISRDVLFDEHTFPFSQ 514
FN HKLQFRS+PCTFLGYSLNHKGYKCL P G I+ISRDV+FDE FPF+Q
Sbjct: 742 FNHHKLQFRSIPCTFLGYSLNHKGYKCLSPNGNILISRDVIFDEXAFPFAQ 792
>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
Length = 1262
Score = 246 bits (629), Expect = 5e-63
Identities = 110/173 (63%), Positives = 136/173 (78%)
Frame = +2
Query: 5 GCPLKAIQTNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRHIVENGLTLLAQ 184
GC LK QT+W GEFR+ ++ +GI HR+SCP +QNG+ ERKHRHIVE GLTLLAQ
Sbjct: 435 GCKLKTFQTDWGGEFRSLKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVELGLTLLAQ 494
Query: 185 ASMPLKYWDEAFRTSVFLINRLPTAVLSHRTPYEVLFHVKPDFSSLKVFDCLCFPNIKPF 364
AS+PLKYW +AF T+VFLINRLPT VL + PYE LF+ KP++S LKVF CLCFP+++P+
Sbjct: 495 ASLPLKYWPDAFSTAVFLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLCFPHLRPY 554
Query: 365 NRHKLQFRSVPCTFLGYSLNHKGYKCLDPKGKIIISRDVLFDEHTFPFSQSTQ 523
N+HKL FRS PCTFLGYS HKGYKCL+ +G++ ISR V+FDE FPF+ Q
Sbjct: 555 NKHKLDFRSSPCTFLGYSSKHKGYKCLNQQGRMFISRSVVFDETRFPFADRLQ 607
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 243 bits (620), Expect = 5e-62
Identities = 109/170 (64%), Positives = 138/170 (81%)
Frame = +2
Query: 14 LKAIQTNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRHIVENGLTLLAQASM 193
+K++QT+W GEFRAF S+L ++GI HRVSCP QQNG+AERKHR IVE+GLTLL AS+
Sbjct: 643 IKSLQTDWGGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLHTASL 702
Query: 194 PLKYWDEAFRTSVFLINRLPTAVLSHRTPYEVLFHVKPDFSSLKVFDCLCFPNIKPFNRH 373
PLK+WDE+FRT V+L NRLPTA+L H+ P EVLF PD+S LKVF C CFPN++P+N H
Sbjct: 703 PLKFWDESFRTVVYLSNRLPTAILHHKCPIEVLFKSIPDYSFLKVFGCSCFPNLRPYNTH 762
Query: 374 KLQFRSVPCTFLGYSLNHKGYKCLDPKGKIIISRDVLFDEHTFPFSQSTQ 523
KLQ+RS CTFLGYSL HKGYKC+ G++ IS DV+F+E +FP+S++ Q
Sbjct: 763 KLQYRSEECTFLGYSLKHKGYKCMSSNGRVYISHDVIFNETSFPYSKTIQ 812
>emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera]
Length = 1242
Score = 239 bits (611), Expect = 6e-61
Identities = 108/173 (62%), Positives = 131/173 (75%)
Frame = +2
Query: 5 GCPLKAIQTNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRHIVENGLTLLAQ 184
GC L Q +W GEFR+ ++ +GI HR+SCP +QNG+ ERKHRHIVE GLTLLAQ
Sbjct: 681 GCKLXTFQXDWGGEFRSLKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVELGLTLLAQ 740
Query: 185 ASMPLKYWDEAFRTSVFLINRLPTAVLSHRTPYEVLFHVKPDFSSLKVFDCLCFPNIKPF 364
AS+PLKYW +AF T VFLINRLPT VL + PYE LF+ KP++S LKVF CLCFP+++P+
Sbjct: 741 ASLPLKYWPDAFSTXVFLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLCFPHLRPY 800
Query: 365 NRHKLQFRSVPCTFLGYSLNHKGYKCLDPKGKIIISRDVLFDEHTFPFSQSTQ 523
N+HKL FRS PCTFLGYS HKGYKCL+ +G++ ISR V FDE FPF Q
Sbjct: 801 NKHKLDFRSSPCTFLGYSSKHKGYKCLNQQGRMFISRSVXFDETKFPFXDXLQ 853
>emb|CAN64002.1| hypothetical protein VITISV_023116 [Vitis vinifera]
Length = 1211
Score = 233 bits (593), Expect = 7e-59
Identities = 104/170 (61%), Positives = 132/170 (77%)
Frame = +2
Query: 14 LKAIQTNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRHIVENGLTLLAQASM 193
+K++QTNW GEFRAF S+L ++GI HRVSCP QQNG+ E KHR IVE+GLTLL S+
Sbjct: 464 IKSLQTNWGGEFRAFQSYLAENGIVHRVSCPXTQQQNGVVEXKHRTIVEHGLTLLHTTSL 523
Query: 194 PLKYWDEAFRTSVFLINRLPTAVLSHRTPYEVLFHVKPDFSSLKVFDCLCFPNIKPFNRH 373
PLK+WDE+FR V+L NRLPT VL H+ P EVLF P++S LKVF C CFPN++P+N H
Sbjct: 524 PLKFWDESFRIVVYLSNRLPTVVLHHKCPIEVLFKSIPBYSFLKVFGCSCFPNLRPYNTH 583
Query: 374 KLQFRSVPCTFLGYSLNHKGYKCLDPKGKIIISRDVLFDEHTFPFSQSTQ 523
KLQ+ S CTFLGYSL HKGY C+ G++ ISRDV+F+E +FP+S++ Q
Sbjct: 584 KLQYXSEECTFLGYSLKHKGYXCMSSNGRVYISRDVIFNETSFPYSKTIQ 633
>emb|CAN68623.1| hypothetical protein VITISV_010681 [Vitis vinifera]
Length = 846
Score = 230 bits (587), Expect = 3e-58
Identities = 111/174 (63%), Positives = 135/174 (77%)
Frame = +2
Query: 2 LGCPLKAIQTNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRHIVENGLTLLA 181
LG P A N GEFRAF S+L ++GI HRVSCP QQNG+AERKHR IVE+GLTLL
Sbjct: 222 LGHPSAATIKN-GGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLH 280
Query: 182 QASMPLKYWDEAFRTSVFLINRLPTAVLSHRTPYEVLFHVKPDFSSLKVFDCLCFPNIKP 361
AS+PLK+WDE+FRT V+L NRLPTAVL H+ P EVLF PD+S LKVF C CFPN++P
Sbjct: 281 TASLPLKFWDESFRTVVYLSNRLPTAVLHHKCPIEVLFKSIPDYSFLKVFGCSCFPNLRP 340
Query: 362 FNRHKLQFRSVPCTFLGYSLNHKGYKCLDPKGKIIISRDVLFDEHTFPFSQSTQ 523
+N HKLQ+RS CTFLGYSL HKGYKC+ G++ ISRDV+F+E +F +S++ Q
Sbjct: 341 YNTHKLQYRSEECTFLGYSLKHKGYKCMFSNGRVYISRDVIFNETSFSYSKTIQ 394
>gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1145
Score = 228 bits (580), Expect = 2e-57
Identities = 103/166 (62%), Positives = 131/166 (78%), Gaps = 1/166 (0%)
Frame = +2
Query: 20 AIQTNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRHIVENGLTLLAQASMPL 199
A+QT+W GE+RA +SF GI H VSCP HQQNG AERKHRHIVE GL+LL+ A MPL
Sbjct: 449 AMQTDWGGEYRALNSFFSKIGIVHHVSCPHTHQQNGSAERKHRHIVEVGLSLLSHAHMPL 508
Query: 200 KYWDEAFRTSVFLINRLPTAVLSHRTPYEVLFHVKPDFSSLKVFDCLCFPNIKPFNRHKL 379
K+WDEAF+ + +LINR+P+ V+ + TP E FH KPD+SSL+VF C C+PN++P+N+HKL
Sbjct: 509 KFWDEAFQAATYLINRVPSRVIQNTTPLEKFFHQKPDYSSLRVFGCACWPNLRPYNKHKL 568
Query: 380 QFRSVPCTFLGYSLNHKGYKCLD-PKGKIIISRDVLFDEHTFPFSQ 514
QFRS C FLG+S HKG+KCLD G++ ISRDV+FDE+ FPFS+
Sbjct: 569 QFRSKRCAFLGFSNMHKGFKCLDISSGRVYISRDVVFDENIFPFSE 614
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 224 bits (571), Expect = 2e-56
Identities = 104/166 (62%), Positives = 128/166 (77%), Gaps = 1/166 (0%)
Frame = +2
Query: 20 AIQTNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRHIVENGLTLLAQASMPL 199
A+Q++W GE+ SF GI H VSCP HQQNG AERKHRHIVE GLTLLA +SMPL
Sbjct: 579 AMQSDWGGEYEKLHSFFTKIGITHHVSCPHTHQQNGSAERKHRHIVEVGLTLLAYSSMPL 638
Query: 200 KYWDEAFRTSVFLINRLPTAVLSHRTPYEVLFHVKPDFSSLKVFDCLCFPNIKPFNRHKL 379
K+WDEAF+ +V+LINR PT +L TP E LF+ PD+SSL+VF C C+P+++P+N HKL
Sbjct: 639 KFWDEAFQAAVYLINRTPTKLLQFLTPLEHLFNQTPDYSSLRVFGCACWPHLRPYNTHKL 698
Query: 380 QFRSVPCTFLGYSLNHKGYKCLDPK-GKIIISRDVLFDEHTFPFSQ 514
QFRS CTFLGYS HKG+KCLDP G++ ISRDV+FDE FPF++
Sbjct: 699 QFRSKQCTFLGYSTLHKGFKCLDPSTGRVYISRDVIFDETNFPFAK 744
>gb|AAP94600.1| putative copia-like retrotransposon Hopscotch polyprotein [Zea
mays]
Length = 969
Score = 223 bits (569), Expect = 4e-56
Identities = 101/165 (61%), Positives = 129/165 (78%), Gaps = 1/165 (0%)
Frame = +2
Query: 20 AIQTNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRHIVENGLTLLAQASMPL 199
A+QT+W GE++ ++F GI H VSCP AHQQNG AERKHRHIVE GL+LLA ASMPL
Sbjct: 426 AVQTDWGGEYQRLNTFFNKIGISHLVSCPHAHQQNGSAERKHRHIVEVGLSLLAHASMPL 485
Query: 200 KYWDEAFRTSVFLINRLPTAVLSHRTPYEVLFHVKPDFSSLKVFDCLCFPNIKPFNRHKL 379
K+WDEAF + +LINR PT +L+ TP+E LFH +PD+S L++F C+C+PN++P+N HKL
Sbjct: 486 KFWDEAFLAAAYLINRTPTKILNLDTPFERLFHKQPDYSVLRIFGCVCWPNLRPYNSHKL 545
Query: 380 QFRSVPCTFLGYSLNHKGYKCLD-PKGKIIISRDVLFDEHTFPFS 511
QFRS C FLGYS HKG+KCLD G++ +SRDV FDE+ FPF+
Sbjct: 546 QFRSKQCVFLGYSSLHKGFKCLDVSTGRVYVSRDVTFDENFFPFA 590
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea
mays]
Length = 1313
Score = 223 bits (569), Expect = 4e-56
Identities = 101/165 (61%), Positives = 129/165 (78%), Gaps = 1/165 (0%)
Frame = +2
Query: 20 AIQTNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRHIVENGLTLLAQASMPL 199
A+QT+W GE++ ++F GI H VSCP AHQQNG AERKHRHIVE GL+LLA ASMPL
Sbjct: 426 AVQTDWGGEYQRLNTFFNKIGISHLVSCPHAHQQNGSAERKHRHIVEVGLSLLAHASMPL 485
Query: 200 KYWDEAFRTSVFLINRLPTAVLSHRTPYEVLFHVKPDFSSLKVFDCLCFPNIKPFNRHKL 379
K+WDEAF + +LINR PT +L+ TP+E LFH +PD+S L++F C+C+PN++P+N HKL
Sbjct: 486 KFWDEAFLAAAYLINRTPTKILNLDTPFERLFHKQPDYSVLRIFGCVCWPNLRPYNSHKL 545
Query: 380 QFRSVPCTFLGYSLNHKGYKCLD-PKGKIIISRDVLFDEHTFPFS 511
QFRS C FLGYS HKG+KCLD G++ +SRDV FDE+ FPF+
Sbjct: 546 QFRSKQCVFLGYSSLHKGFKCLDVSTGRVYVSRDVTFDENFFPFA 590
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 222 bits (566), Expect = 9e-56
Identities = 101/170 (59%), Positives = 127/170 (74%), Gaps = 1/170 (0%)
Frame = +2
Query: 5 GCPLKAIQTNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRHIVENGLTLLAQ 184
G + A Q++W GE+ ++ + GIHH+VSCP HQQNG AERKHRHIVE GL LLAQ
Sbjct: 574 GRKIIAFQSDWGGEYEKLNAHFKTIGIHHQVSCPHTHQQNGAAERKHRHIVEVGLALLAQ 633
Query: 185 ASMPLKYWDEAFRTSVFLINRLPTAVLSHRTPYEVLFHVKPDFSSLKVFDCLCFPNIKPF 364
+SMPLKYWD AF +V+LINR P+ ++H TP L PD+SSL++F C C+PN++P+
Sbjct: 634 SSMPLKYWDHAFLAAVYLINRTPSKTIAHDTPLHKLTGATPDYSSLRIFGCACWPNLRPY 693
Query: 365 NRHKLQFRSVPCTFLGYSLNHKGYKCLD-PKGKIIISRDVLFDEHTFPFS 511
N+HKLQFRS C FLGYS HKG+KCLD G+I ISRDV+FDEH FPF+
Sbjct: 694 NQHKLQFRSTRCVFLGYSNMHKGFKCLDISTGRIYISRDVVFDEHVFPFA 743
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 219 bits (558), Expect = 8e-55
Identities = 99/166 (59%), Positives = 131/166 (78%), Gaps = 1/166 (0%)
Frame = +2
Query: 20 AIQTNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRHIVENGLTLLAQASMPL 199
A+QT+W GE+++ +SF GI H VSCP HQQNG AERKHRHIVE GL+LL+ ASMPL
Sbjct: 573 AMQTDWGGEYQSLNSFFSKIGIVHHVSCPHTHQQNGSAERKHRHIVEIGLSLLSHASMPL 632
Query: 200 KYWDEAFRTSVFLINRLPTAVLSHRTPYEVLFHVKPDFSSLKVFDCLCFPNIKPFNRHKL 379
K+WDEAF+ + +LINR+P+ V+ + +P E LF KPD+SSL++F C C+PN++P+N HKL
Sbjct: 633 KFWDEAFQVATYLINRVPSRVIHNISPLEKLFKQKPDYSSLRIFGCACWPNLRPYNNHKL 692
Query: 380 QFRSVPCTFLGYSLNHKGYKCLD-PKGKIIISRDVLFDEHTFPFSQ 514
QFRS C FLG+S HKG+KCL+ G+I ISRDV+FDE+ FPF++
Sbjct: 693 QFRSKRCVFLGFSTMHKGFKCLEVSTGRIYISRDVVFDENIFPFTE 738
>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1478
Score = 219 bits (558), Expect = 8e-55
Identities = 99/166 (59%), Positives = 131/166 (78%), Gaps = 1/166 (0%)
Frame = +2
Query: 20 AIQTNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRHIVENGLTLLAQASMPL 199
A+QT+W GE+++ +SF GI H VSCP HQQNG AERKHRHIVE GL+LL+ ASMPL
Sbjct: 606 AMQTDWGGEYQSLNSFFSKIGIVHHVSCPHTHQQNGSAERKHRHIVEIGLSLLSHASMPL 665
Query: 200 KYWDEAFRTSVFLINRLPTAVLSHRTPYEVLFHVKPDFSSLKVFDCLCFPNIKPFNRHKL 379
K+WDEAF+ + +LINR+P+ V+ + +P E LF KPD+SSL++F C C+PN++P+N HKL
Sbjct: 666 KFWDEAFQAATYLINRVPSRVIHNISPLEKLFKQKPDYSSLRIFGCACWPNLRPYNNHKL 725
Query: 380 QFRSVPCTFLGYSLNHKGYKCLD-PKGKIIISRDVLFDEHTFPFSQ 514
QFRS C FLG+S HKG+KCL+ G+I ISRDV+FDE+ FPF++
Sbjct: 726 QFRSKRCVFLGFSTMHKGFKCLEVSTGRIYISRDVVFDENIFPFTE 771
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 218 bits (555), Expect = 2e-54
Identities = 98/165 (59%), Positives = 128/165 (77%), Gaps = 1/165 (0%)
Frame = +2
Query: 20 AIQTNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRHIVENGLTLLAQASMPL 199
A+QT+W GE++ +SF GI H VSCP HQQNG AERKHRHI+E GL+LL+ ASMPL
Sbjct: 579 AMQTDWGGEYQKLNSFFAKIGIDHHVSCPHTHQQNGSAERKHRHIIEVGLSLLSYASMPL 638
Query: 200 KYWDEAFRTSVFLINRLPTAVLSHRTPYEVLFHVKPDFSSLKVFDCLCFPNIKPFNRHKL 379
K+WDEAF + +LINR+P+ + + TP E LF+ KPD+ SL+VF C C+P+++P+N HKL
Sbjct: 639 KFWDEAFVAATYLINRVPSKTIQNSTPLEKLFNQKPDYLSLRVFGCACWPHLRPYNTHKL 698
Query: 380 QFRSVPCTFLGYSLNHKGYKCLD-PKGKIIISRDVLFDEHTFPFS 511
QFRS C FLG+S +HKG+KCLD G++ ISRDV+FDE+ FPFS
Sbjct: 699 QFRSKQCVFLGFSTHHKGFKCLDVSSGRVYISRDVVFDENIFPFS 743
>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708884|gb|ABF96679.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1437
Score = 218 bits (554), Expect = 2e-54
Identities = 101/166 (60%), Positives = 127/166 (76%), Gaps = 1/166 (0%)
Frame = +2
Query: 20 AIQTNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRHIVENGLTLLAQASMPL 199
A+QT+W GE++ SF GI H VSCP HQQNG AERKHRHIVE GL LLA +SMPL
Sbjct: 577 AMQTDWGGEYQKLHSFFNKVGITHHVSCPHTHQQNGSAERKHRHIVEVGLALLAYSSMPL 636
Query: 200 KYWDEAFRTSVFLINRLPTAVLSHRTPYEVLFHVKPDFSSLKVFDCLCFPNIKPFNRHKL 379
K+W EAF ++V+LINR P+ VL +P E L KPD+++L+VF C C+PN++P+N+HKL
Sbjct: 637 KFWGEAFLSAVYLINRTPSRVLHDVSPLERLLGHKPDYNALRVFGCACWPNLRPYNKHKL 696
Query: 380 QFRSVPCTFLGYSLNHKGYKCLDPK-GKIIISRDVLFDEHTFPFSQ 514
QFRS CTFLGYS HKG+KCLDP G++ ISRDV+FDE FPF++
Sbjct: 697 QFRSTTCTFLGYSTLHKGFKCLDPSTGRVYISRDVVFDETQFPFTK 742
>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1210
Score = 217 bits (552), Expect = 4e-54
Identities = 100/165 (60%), Positives = 123/165 (74%), Gaps = 1/165 (0%)
Frame = +2
Query: 20 AIQTNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRHIVENGLTLLAQASMPL 199
A+QT+W GE+ F GI H VSCP HQQNG AERKHRHIVE GL+LLA ASMPL
Sbjct: 570 AMQTDWGGEYEKLHDFFTKIGISHHVSCPHTHQQNGSAERKHRHIVEVGLSLLAHASMPL 629
Query: 200 KYWDEAFRTSVFLINRLPTAVLSHRTPYEVLFHVKPDFSSLKVFDCLCFPNIKPFNRHKL 379
K+WDEAF + +LINR P+ V+ + TP E LFH KP ++SL+VF C C+PN++P+N KL
Sbjct: 630 KFWDEAFIAATYLINRTPSKVIQYETPLEHLFHQKPSYTSLRVFGCACWPNLRPYNARKL 689
Query: 380 QFRSVPCTFLGYSLNHKGYKCLD-PKGKIIISRDVLFDEHTFPFS 511
QFRS C FLGYS HKG+KCLD G++ ISRDV+FDE+ FPF+
Sbjct: 690 QFRSKQCVFLGYSNLHKGFKCLDVAAGRVYISRDVVFDENVFPFA 734
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 215 bits (548), Expect = 1e-53
Identities = 97/165 (58%), Positives = 127/165 (76%), Gaps = 1/165 (0%)
Frame = +2
Query: 20 AIQTNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRHIVENGLTLLAQASMPL 199
A+QT+W GE++ +SF GI H VSCP HQQNG AERKH+HI+E GL+LL+ ASMPL
Sbjct: 582 AMQTDWGGEYQKLNSFFAQIGIDHHVSCPHTHQQNGSAERKHKHIIEVGLSLLSYASMPL 641
Query: 200 KYWDEAFRTSVFLINRLPTAVLSHRTPYEVLFHVKPDFSSLKVFDCLCFPNIKPFNRHKL 379
K+WDEAF + +LINR+P+ + + TP E LF+ KPD+SSL+VF C C+P++ P+N HKL
Sbjct: 642 KFWDEAFVAATYLINRIPSKTIQNSTPLEKLFNQKPDYSSLRVFSCTCWPHLHPYNTHKL 701
Query: 380 QFRSVPCTFLGYSLNHKGYKCLD-PKGKIIISRDVLFDEHTFPFS 511
QFRS C FLG+S +HKG+K LD G++ ISRDV+FDE+ FPFS
Sbjct: 702 QFRSKQCVFLGFSTHHKGFKFLDVSSGRVYISRDVVFDENVFPFS 746
>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 215 bits (548), Expect = 1e-53
Identities = 97/165 (58%), Positives = 127/165 (76%), Gaps = 1/165 (0%)
Frame = +2
Query: 20 AIQTNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRHIVENGLTLLAQASMPL 199
A+QT+W GE++ +SF GI H VSCP HQQNG AERKH+HI+E GL+LL+ ASMPL
Sbjct: 582 AMQTDWGGEYQKLNSFFAQIGIDHHVSCPHTHQQNGSAERKHKHIIEVGLSLLSYASMPL 641
Query: 200 KYWDEAFRTSVFLINRLPTAVLSHRTPYEVLFHVKPDFSSLKVFDCLCFPNIKPFNRHKL 379
K+WDEAF + +LINR+P+ + + TP E LF+ KPD+SSL+VF C C+P++ P+N HKL
Sbjct: 642 KFWDEAFVAATYLINRIPSKTIQNSTPLEKLFNQKPDYSSLRVFSCTCWPHLHPYNTHKL 701
Query: 380 QFRSVPCTFLGYSLNHKGYKCLD-PKGKIIISRDVLFDEHTFPFS 511
QFRS C FLG+S +HKG+K LD G++ ISRDV+FDE+ FPFS
Sbjct: 702 QFRSKQCVFLGFSTHHKGFKFLDVSSGRVYISRDVVFDENVFPFS 746
>ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624640 [Citrus sinensis]
Length = 1682
Score = 215 bits (547), Expect = 1e-53
Identities = 95/165 (57%), Positives = 123/165 (74%)
Frame = +2
Query: 14 LKAIQTNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRHIVENGLTLLAQASM 193
+K +QT+W GEFR F+S+L GI R CP H QNG ERKHRHIV+ GLTLLAQA++
Sbjct: 43 IKTVQTDWGGEFRTFASYLTQFGIQFRHPCPHIHHQNGRIERKHRHIVDIGLTLLAQANL 102
Query: 194 PLKYWDEAFRTSVFLINRLPTAVLSHRTPYEVLFHVKPDFSSLKVFDCLCFPNIKPFNRH 373
PLK+W AF T+VFLINRLPT L++ +PY+ LF PD+ SL+VF C CFP ++P+NRH
Sbjct: 103 PLKFWWNAFHTAVFLINRLPTPTLNNISPYQKLFQQVPDYVSLRVFGCACFPYLRPYNRH 162
Query: 374 KLQFRSVPCTFLGYSLNHKGYKCLDPKGKIIISRDVLFDEHTFPF 508
KL FRS C F+GYS +HKGY+CL G++ +S V+FDE +FP+
Sbjct: 163 KLSFRSNRCVFIGYSSSHKGYQCLHSSGRVYVSNHVIFDEQSFPY 207
>gb|AAU90262.1| integrase core domain containing protein [Oryza sativa Japonica
Group] gi|108710062|gb|ABF97857.1| retrotransposon
protein, putative, Ty1-copia subclass, expressed [Oryza
sativa Japonica Group]
Length = 1021
Score = 215 bits (547), Expect = 1e-53
Identities = 100/166 (60%), Positives = 126/166 (75%), Gaps = 1/166 (0%)
Frame = +2
Query: 20 AIQTNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRHIVENGLTLLAQASMPL 199
A+Q++W GE+ ++ GI H VSCP AHQQNG AERKHRHIVE GL+LLA ASMPL
Sbjct: 494 AMQSDWGGEYEKLNAIFTKIGITHHVSCPYAHQQNGSAERKHRHIVEVGLSLLAHASMPL 553
Query: 200 KYWDEAFRTSVFLINRLPTAVLSHRTPYEVLFHVKPDFSSLKVFDCLCFPNIKPFNRHKL 379
K+WDEAF T+ +LINR P+ V+ + TP E L + KP++SSL+ F C C+PN++P+N KL
Sbjct: 554 KFWDEAFLTATYLINRTPSKVIQYSTPLERLLNQKPNYSSLRTFGCACWPNLRPYNNRKL 613
Query: 380 QFRSVPCTFLGYSLNHKGYKCLD-PKGKIIISRDVLFDEHTFPFSQ 514
QFRS C FLGYS HKG+KCLD G++ ISRDV+FDE+ FPFSQ
Sbjct: 614 QFRSKQCVFLGYSNIHKGFKCLDVATGRVYISRDVVFDENIFPFSQ 659