BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00044198
         (911 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   323   4e-86
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              323   4e-86
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-...   290   7e-76
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   289   1e-75
ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prun...   285   1e-74
gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus no...   269   1e-69
ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV su...   267   5e-69
ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV su...   267   5e-69
ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr...   267   5e-69
gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum ma...   258   2e-66
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su...   254   3e-65
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su...   254   3e-65
ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV su...   253   1e-64
ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV su...   253   1e-64
ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV su...   253   1e-64
ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D sub...   251   2e-64
ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Me...   248   2e-63
ref|XP_007158454.1| hypothetical protein PHAVU_002G153700g [Phas...   247   4e-63
ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phas...   247   4e-63
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D sub...   246   9e-63

>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Vitis vinifera]
          Length = 1560

 Score =  323 bits (829), Expect = 4e-86
 Identities = 161/303 (53%), Positives = 212/303 (69%)
 Frame = -3

Query: 909  LKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYFLRSLK 730
            L+V+VS +C     W +L++A L+IMD+IDWERSHPDNIHDIF  YGIDA  KYFL SLK
Sbjct: 1149 LRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIHDIFVVYGIDAGWKYFLNSLK 1208

Query: 729  STVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGISKQMDLASISSPFMQACFSNPGSC 550
            S +SDIGKT+LPEHLLLVA CLS TGEF+GLNA+G+++Q +L SISSPFMQ CFS+PGSC
Sbjct: 1209 SAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMARQKELTSISSPFMQGCFSSPGSC 1268

Query: 549  FIXXXXXXXXXXXXGTLDAVAWGKEVPVGTGGQFDILYSGKGHKLDKPVDVFHMLRGESS 370
            FI            G+LDA+AWGK   VG+GG FDILYS KGH+L +P D++ +L  ++S
Sbjct: 1269 FIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDILYSAKGHELARPEDIYKLLGSQTS 1328

Query: 369  LQGNNIEMRIPAYQKNMCDKWGAESLSACDDPITKGCTNSERLLNPVFRRDHSLDDVVKL 190
                N+++++P        K GA+ + A  D  +KGC + E++   V R   SL+D+ KL
Sbjct: 1329 CHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGCKSLEKISKSVLRSFLSLNDIQKL 1388

Query: 189  SITLRDILHKSSINEFLSEADKSVVMEALHYHPHSTEKMGTGPQDIQVGKHPKHGNSRCF 10
            S  L+ IL K  IN  LSE DK+ +M AL++HP   EK+G G Q+I+V  H K+ N+RCF
Sbjct: 1389 SRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDEKIGPGAQNIKVRYHSKYHNTRCF 1448

Query: 9    MLM 1
             L+
Sbjct: 1449 SLV 1451


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  323 bits (829), Expect = 4e-86
 Identities = 161/303 (53%), Positives = 212/303 (69%)
 Frame = -3

Query: 909  LKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYFLRSLK 730
            L+V+VS +C     W +L++A L+IMD+IDWERSHPDNIHDIF  YGIDA  KYFL SLK
Sbjct: 1007 LRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIHDIFVVYGIDAGWKYFLNSLK 1066

Query: 729  STVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGISKQMDLASISSPFMQACFSNPGSC 550
            S +SDIGKT+LPEHLLLVA CLS TGEF+GLNA+G+++Q +L SISSPFMQ CFS+PGSC
Sbjct: 1067 SAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMARQKELTSISSPFMQGCFSSPGSC 1126

Query: 549  FIXXXXXXXXXXXXGTLDAVAWGKEVPVGTGGQFDILYSGKGHKLDKPVDVFHMLRGESS 370
            FI            G+LDA+AWGK   VG+GG FDILYS KGH+L +P D++ +L  ++S
Sbjct: 1127 FIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDILYSAKGHELARPEDIYKLLGSQTS 1186

Query: 369  LQGNNIEMRIPAYQKNMCDKWGAESLSACDDPITKGCTNSERLLNPVFRRDHSLDDVVKL 190
                N+++++P        K GA+ + A  D  +KGC + E++   V R   SL+D+ KL
Sbjct: 1187 CHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGCKSLEKISKSVLRSFLSLNDIQKL 1246

Query: 189  SITLRDILHKSSINEFLSEADKSVVMEALHYHPHSTEKMGTGPQDIQVGKHPKHGNSRCF 10
            S  L+ IL K  IN  LSE DK+ +M AL++HP   EK+G G Q+I+V  H K+ N+RCF
Sbjct: 1247 SRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDEKIGPGAQNIKVRYHSKYHNTRCF 1306

Query: 9    MLM 1
             L+
Sbjct: 1307 SLV 1309


>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
            cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
            polymerase II subunit RPB1-B, putative [Theobroma cacao]
          Length = 1484

 Score =  290 bits (741), Expect = 7e-76
 Identities = 145/303 (47%), Positives = 204/303 (67%)
 Frame = -3

Query: 909  LKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYFLRSLK 730
            L+VFVS +    K+W +L+N  L+IMD+IDW RSHPDNI+ +   YGIDA  K+FL +LK
Sbjct: 1142 LRVFVSGDFGITKLWGVLMNDCLQIMDMIDWTRSHPDNINQLCLAYGIDAGWKFFLNNLK 1201

Query: 729  STVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGISKQMDLASISSPFMQACFSNPGSC 550
            S +SD GKTIL EHLL+VA+CLS TGEF+GLN++G+ +Q + A +SSPFMQACFSNP + 
Sbjct: 1202 SAISDTGKTILNEHLLVVANCLSATGEFVGLNSKGLRQQREHAYVSSPFMQACFSNPSAS 1261

Query: 549  FIXXXXXXXXXXXXGTLDAVAWGKEVPVGTGGQFDILYSGKGHKLDKPVDVFHMLRGESS 370
            F+            GT+DA+AWG+   +GTGGQFDI+YS K  +L +PVDV+ +L    S
Sbjct: 1262 FVKAAKTGASDDLQGTIDALAWGRIPHIGTGGQFDIIYSVKDQRLAEPVDVYKLLGSSIS 1321

Query: 369  LQGNNIEMRIPAYQKNMCDKWGAESLSACDDPITKGCTNSERLLNPVFRRDHSLDDVVKL 190
             Q  ++E  +P       +K+G+  + A  D  ++     E     ++R   +LDD+ +L
Sbjct: 1322 SQKQDVEFEVPKALNFKSEKYGSLLIDALGDSASEELKKIETKRRSIWRELLTLDDIQRL 1381

Query: 189  SITLRDILHKSSINEFLSEADKSVVMEALHYHPHSTEKMGTGPQDIQVGKHPKHGNSRCF 10
            S  LR+ILHK  I+  LSEAD + +M AL++HP   EK+G+G Q+I+VG HP+H N+RCF
Sbjct: 1382 SRALRNILHKYPIDHRLSEADWNTLMMALYFHPRRDEKIGSGAQEIKVGYHPEHANARCF 1441

Query: 9    MLM 1
             L+
Sbjct: 1442 SLV 1444


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
            sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
            QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Cucumis sativus]
          Length = 1469

 Score =  289 bits (739), Expect = 1e-75
 Identities = 145/294 (49%), Positives = 201/294 (68%), Gaps = 1/294 (0%)
 Frame = -3

Query: 879  SAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYFLRSLKSTVSDIGKTI 700
            +++ W  L+N  L IMDLIDW RSHPDN H +   YGID+  KYFL SL+S   D+GKTI
Sbjct: 1138 NSRFWATLMNNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLESATLDVGKTI 1197

Query: 699  LPEHLLLVADCLSVTGEFLGLNARGISKQMDLASISSPFMQACFSNPGSCFIXXXXXXXX 520
              EHLLLV++ LS TGEF+GLN +G++ Q + A + +PFMQACFS+PG+C I        
Sbjct: 1198 RLEHLLLVSNSLSATGEFVGLNVKGLTHQREHALVKTPFMQACFSSPGACMIKAAKAGIK 1257

Query: 519  XXXXGTLDAVAWGKEVPVGTGGQFDILYSGKGHKLDKPVDVFHMLRGESSLQGNNIEMRI 340
                G+LDA+AWG+   +GTGGQFDILYSGKGH+L+KPVDV+++L G+S+ +  N   +I
Sbjct: 1258 DNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQN--TKI 1315

Query: 339  PAYQKN-MCDKWGAESLSACDDPITKGCTNSERLLNPVFRRDHSLDDVVKLSITLRDILH 163
             +  KN + +K+ A+ +        KG    + +   + R+  +L+D+ KLS  LR ILH
Sbjct: 1316 ESLDKNTISEKYSAQLMLKNGGSTIKGLKRLDSVSKSILRKFLTLNDIQKLSFALRTILH 1375

Query: 162  KSSINEFLSEADKSVVMEALHYHPHSTEKMGTGPQDIQVGKHPKHGNSRCFMLM 1
            K S+NE L+E DKS +M AL++HPH  EK+G G QDI+VG H K+ N+RCF+L+
Sbjct: 1376 KYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLI 1429


>ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prunus persica]
            gi|462406650|gb|EMJ12114.1| hypothetical protein
            PRUPE_ppa000278mg [Prunus persica]
          Length = 1356

 Score =  285 bits (730), Expect = 1e-74
 Identities = 146/303 (48%), Positives = 200/303 (66%)
 Frame = -3

Query: 909  LKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYFLRSLK 730
            L+V +S      ++W++L++  L+IMDLIDW RSHPDN+HD    YGIDA  KYFL +L+
Sbjct: 1024 LRVSMSGKTGRRRLWSMLMDNCLQIMDLIDWSRSHPDNVHDYCIAYGIDAGWKYFLNNLE 1083

Query: 729  STVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGISKQMDLASISSPFMQACFSNPGSC 550
            +  +DIGK ILP+HL+LVADCLS TGEF+GLNA+GI++Q    S+SSPF+QACFS+PG+C
Sbjct: 1084 TAANDIGKDILPQHLILVADCLSATGEFVGLNAKGIAQQKGHTSVSSPFVQACFSSPGAC 1143

Query: 549  FIXXXXXXXXXXXXGTLDAVAWGKEVPVGTGGQFDILYSGKGHKLDKPVDVFHMLRGESS 370
            FI            G+++A+AWG   P GTG QFDILYS +G  L KP++ + +L  + S
Sbjct: 1144 FIKAAKGGVVDELHGSVEALAWGNTPPSGTGRQFDILYSKEGLNLSKPLNPYDLLGSQIS 1203

Query: 369  LQGNNIEMRIPAYQKNMCDKWGAESLSACDDPITKGCTNSERLLNPVFRRDHSLDDVVKL 190
                N      A+  N  DK    S+         G   SE +   V R+  +++D+ K 
Sbjct: 1204 SSRENAFETSKAW-NNTLDKCDVTSI---------GLEKSESVFKSVIRKYLTINDIQKW 1253

Query: 189  SITLRDILHKSSINEFLSEADKSVVMEALHYHPHSTEKMGTGPQDIQVGKHPKHGNSRCF 10
            + TL+ IL K  INE L+E DKS++  ALH+HPH  +KMG+G QDI+VG+HPKH N+RCF
Sbjct: 1254 TQTLKRILRKYDINESLTEGDKSILKMALHFHPHKVDKMGSGVQDIKVGQHPKHENARCF 1313

Query: 9    MLM 1
            ML+
Sbjct: 1314 MLV 1316


>gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus notabilis]
          Length = 1410

 Score =  269 bits (687), Expect = 1e-69
 Identities = 146/308 (47%), Positives = 204/308 (66%), Gaps = 5/308 (1%)
 Frame = -3

Query: 909  LKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYFLRSLK 730
            LKV +S +      W+ L+N  L IMDLIDW RSHP+N+++  + YGID+  K+FL +L+
Sbjct: 1060 LKVSMSGDSGVKSYWSTLMNDCLRIMDLIDWSRSHPENVNEFCSVYGIDSGWKFFLNNLE 1119

Query: 729  STVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGISKQMDLASISSPFMQACFSNPGSC 550
            S VSD+GKTILPEHLLLVA+ LSVTG F+GL  +G+++Q + AS+++PF QACFSNP +C
Sbjct: 1120 SAVSDVGKTILPEHLLLVANTLSVTGNFVGLTPKGLARQREHASVATPFSQACFSNPAAC 1179

Query: 549  FIXXXXXXXXXXXXGTLDAVAWGKEVPVGTGGQFDILYSGKGHKLDKPVDVFHMLRGESS 370
            FI            GTLDA+AWG   P+GTGGQF++++SGKGH++DKP++V+ ML    S
Sbjct: 1180 FIKAAKAEVTDGLHGTLDALAWGNIPPLGTGGQFELVFSGKGHEVDKPINVYDMLATGIS 1239

Query: 369  --LQGNNIEMRIPAYQKNMCDKWGAESLSACDDPITKGCTN---SERLLNPVFRRDHSLD 205
              +QG N     P  + +   K+GA  L   D  +++G      S+  +  +F+    LD
Sbjct: 1240 PDVQGVN---ETPDAKNHRSVKFGA--LLLYDKSVSQGLKKLGISKDRIKKLFK----LD 1290

Query: 204  DVVKLSITLRDILHKSSINEFLSEADKSVVMEALHYHPHSTEKMGTGPQDIQVGKHPKHG 25
            D+  LS  L  IL+K  IN+ L   DKS +M AL++HP   EK+GTG QDI+V  HPKH 
Sbjct: 1291 DIWILSNALAKILNKYPINQSLDHKDKSTLMIALYFHPRIDEKIGTGFQDIKVAYHPKHQ 1350

Query: 24   NSRCFMLM 1
            +SRCF+L+
Sbjct: 1351 SSRCFVLV 1358


>ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Citrus sinensis] gi|568847098|ref|XP_006477377.1|
            PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
            isoform X3 [Citrus sinensis]
            gi|568847100|ref|XP_006477378.1| PREDICTED: DNA-directed
            RNA polymerase IV subunit 1-like isoform X4 [Citrus
            sinensis]
          Length = 1443

 Score =  267 bits (682), Expect = 5e-69
 Identities = 144/305 (47%), Positives = 197/305 (64%), Gaps = 2/305 (0%)
 Frame = -3

Query: 909  LKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYFLRSLK 730
            L+V +S  C    +W+ L+N   +IMD+IDW RSHPDNI      YGIDA  ++FL +L+
Sbjct: 1104 LRVSMSGQCHITSLWSALMNDCHQIMDMIDWTRSHPDNIRSFCLAYGIDAGLQFFLTNLE 1163

Query: 729  STVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGISKQMDLASISSPFMQACFSNPGSC 550
            S +SD GK ILPEHLL+VA+ LS TGEF+GLNA+G++ Q   +S+SSPF+QA FSNPG+ 
Sbjct: 1164 SAISDTGKNILPEHLLIVANTLSATGEFVGLNAKGLALQRKHSSVSSPFVQAFFSNPGAS 1223

Query: 549  FIXXXXXXXXXXXXGTLDAVAWGKEVPVGTGGQFDILYSGKGHKLDKPVDVFHMLRGESS 370
            FI            G++DA+ WGK   VGTGG FDI+YSG+G  L KPVDV+++L    S
Sbjct: 1224 FIKAAKAGAVDNLQGSVDALGWGKVPSVGTGGHFDIIYSGEGRTLSKPVDVYNLLSTPVS 1283

Query: 369  LQGNNIEMRIPAYQKNMCDKWGAESLSACDDPITKGCTN--SERLLNPVFRRDHSLDDVV 196
             + N  ++++   Q  + DK GA+      D   KG  N   E +   V R+  + +DV+
Sbjct: 1284 SKQNE-KLKVCKAQGLISDKCGAK----FGDFAFKGLGNLDFETISRGVLRKSWTYNDVL 1338

Query: 195  KLSITLRDILHKSSINEFLSEADKSVVMEALHYHPHSTEKMGTGPQDIQVGKHPKHGNSR 16
            +LS  L+ ILHK SI + LSE DK+ V+ AL++HP   EK+G  P DI+V  HP+H NSR
Sbjct: 1339 RLSNALKKILHKYSIGQRLSEKDKTTVIRALYFHPRRNEKLGIEPPDIEVTYHPEHQNSR 1398

Query: 15   CFMLM 1
            CF L+
Sbjct: 1399 CFSLV 1403


>ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Citrus sinensis]
          Length = 1481

 Score =  267 bits (682), Expect = 5e-69
 Identities = 144/305 (47%), Positives = 197/305 (64%), Gaps = 2/305 (0%)
 Frame = -3

Query: 909  LKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYFLRSLK 730
            L+V +S  C    +W+ L+N   +IMD+IDW RSHPDNI      YGIDA  ++FL +L+
Sbjct: 1142 LRVSMSGQCHITSLWSALMNDCHQIMDMIDWTRSHPDNIRSFCLAYGIDAGLQFFLTNLE 1201

Query: 729  STVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGISKQMDLASISSPFMQACFSNPGSC 550
            S +SD GK ILPEHLL+VA+ LS TGEF+GLNA+G++ Q   +S+SSPF+QA FSNPG+ 
Sbjct: 1202 SAISDTGKNILPEHLLIVANTLSATGEFVGLNAKGLALQRKHSSVSSPFVQAFFSNPGAS 1261

Query: 549  FIXXXXXXXXXXXXGTLDAVAWGKEVPVGTGGQFDILYSGKGHKLDKPVDVFHMLRGESS 370
            FI            G++DA+ WGK   VGTGG FDI+YSG+G  L KPVDV+++L    S
Sbjct: 1262 FIKAAKAGAVDNLQGSVDALGWGKVPSVGTGGHFDIIYSGEGRTLSKPVDVYNLLSTPVS 1321

Query: 369  LQGNNIEMRIPAYQKNMCDKWGAESLSACDDPITKGCTN--SERLLNPVFRRDHSLDDVV 196
             + N  ++++   Q  + DK GA+      D   KG  N   E +   V R+  + +DV+
Sbjct: 1322 SKQNE-KLKVCKAQGLISDKCGAK----FGDFAFKGLGNLDFETISRGVLRKSWTYNDVL 1376

Query: 195  KLSITLRDILHKSSINEFLSEADKSVVMEALHYHPHSTEKMGTGPQDIQVGKHPKHGNSR 16
            +LS  L+ ILHK SI + LSE DK+ V+ AL++HP   EK+G  P DI+V  HP+H NSR
Sbjct: 1377 RLSNALKKILHKYSIGQRLSEKDKTTVIRALYFHPRRNEKLGIEPPDIEVTYHPEHQNSR 1436

Query: 15   CFMLM 1
            CF L+
Sbjct: 1437 CFSLV 1441


>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
            gi|557542783|gb|ESR53761.1| hypothetical protein
            CICLE_v10018489mg [Citrus clementina]
          Length = 1443

 Score =  267 bits (682), Expect = 5e-69
 Identities = 144/305 (47%), Positives = 197/305 (64%), Gaps = 2/305 (0%)
 Frame = -3

Query: 909  LKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYFLRSLK 730
            L+V +S  C    +W+ L+N   +IMD+IDW RSHPDNI      YGIDA  ++FL +L+
Sbjct: 1104 LRVSMSGQCHITSLWSALMNDCHQIMDMIDWTRSHPDNIRSFCLAYGIDAGLQFFLTNLE 1163

Query: 729  STVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGISKQMDLASISSPFMQACFSNPGSC 550
            S +SD GK ILPEHLL+VA+ LS TGEF+GLNA+G++ Q   +S+SSPF+QA FSNPG+ 
Sbjct: 1164 SAISDTGKNILPEHLLIVANTLSATGEFVGLNAKGLALQRKHSSVSSPFVQAFFSNPGAS 1223

Query: 549  FIXXXXXXXXXXXXGTLDAVAWGKEVPVGTGGQFDILYSGKGHKLDKPVDVFHMLRGESS 370
            FI            G++DA+ WGK   VGTGG FDI+YSG+G  L KPVDV+++L    S
Sbjct: 1224 FIKAAKAGAVDNLQGSVDALGWGKVPSVGTGGHFDIIYSGEGRTLSKPVDVYNLLSTPVS 1283

Query: 369  LQGNNIEMRIPAYQKNMCDKWGAESLSACDDPITKGCTN--SERLLNPVFRRDHSLDDVV 196
             + N  ++++   Q  + DK GA+      D   KG  N   E +   V R+  + +DV+
Sbjct: 1284 SKQNE-KLKVCKAQGLISDKCGAK----FGDFAFKGLGNLDFETISRGVLRKSWTYNDVL 1338

Query: 195  KLSITLRDILHKSSINEFLSEADKSVVMEALHYHPHSTEKMGTGPQDIQVGKHPKHGNSR 16
            +LS  L+ ILHK SI + LSE DK+ V+ AL++HP   EK+G  P DI+V  HP+H NSR
Sbjct: 1339 RLSNALKKILHKYSIGQRLSEKDKTTVIRALYFHPRRNEKLGIEPPDIEVTYHPEHQNSR 1398

Query: 15   CFMLM 1
            CF L+
Sbjct: 1399 CFSLV 1403


>gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum majus]
          Length = 1112

 Score =  258 bits (660), Expect = 2e-66
 Identities = 127/303 (41%), Positives = 190/303 (62%)
 Frame = -3

Query: 909  LKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYFLRSLK 730
            ++VF+SENC+ A+ WN+L+  SL I  LIDW+RSHPD++HD    +GID A   F+ SL 
Sbjct: 796  VRVFMSENCERARFWNILVEKSLRIRSLIDWDRSHPDDVHDYGEAFGIDTAWMCFVNSLN 855

Query: 729  STVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGISKQMDLASISSPFMQACFSNPGSC 550
            S +S+ GKTILPEHL+  A+CLS+TGEF+ LNA+G+++Q   A+I+SPF+QACFSNP  C
Sbjct: 856  SAISETGKTILPEHLIATANCLSMTGEFVSLNAKGLAQQRKEATINSPFVQACFSNPSDC 915

Query: 549  FIXXXXXXXXXXXXGTLDAVAWGKEVPVGTGGQFDILYSGKGHKLDKPVDVFHMLRGESS 370
            FI            G++D++AWG+  P+GTGGQFDI+YSGKGH+  KP DV+ +L  +  
Sbjct: 916  FIKAAKMGQMDNLQGSVDSLAWGQTPPIGTGGQFDIIYSGKGHEPSKPTDVYSLLNSQVG 975

Query: 369  LQGNNIEMRIPAYQKNMCDKWGAESLSACDDPITKGCTNSERLLNPVFRRDHSLDDVVKL 190
                + ++++P            +  S  D          +R L  +     + D++ ++
Sbjct: 976  FAKPSEKIKLP-----------VQFTSGNDQSQNLKTNGRKRFLAGMKSLRSAEDEIREV 1024

Query: 189  SITLRDILHKSSINEFLSEADKSVVMEALHYHPHSTEKMGTGPQDIQVGKHPKHGNSRCF 10
            S+ L+ +LH+ + +  L   DK++ + AL YHP   EK G G  +I+VG+HP H  SRCF
Sbjct: 1025 SLALKRMLHEYASDCQLRGEDKTLALRALQYHPRWEEKTGAGTVEIKVGRHPDHKESRCF 1084

Query: 9    MLM 1
             ++
Sbjct: 1085 FVV 1087


>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Solanum tuberosum]
          Length = 1233

 Score =  254 bits (649), Expect = 3e-65
 Identities = 134/304 (44%), Positives = 194/304 (63%), Gaps = 1/304 (0%)
 Frame = -3

Query: 909  LKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYFLRSLK 730
            L+VF+SE+C   K WN L+++ L+I DLIDWERS+PD++HD+   YGID A +YFL  L 
Sbjct: 895  LQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYFLCKLH 954

Query: 729  STVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGISKQMDLASISSPFMQACFSNPGSC 550
            S VS+ GK ILPEHL+L AD L+ TGEF+ L+A+G++ Q   A + SPFMQACFSNPG  
Sbjct: 955  SAVSETGKKILPEHLVLAADSLTATGEFVPLSAKGLTLQRKAAGVISPFMQACFSNPGDS 1014

Query: 549  FIXXXXXXXXXXXXGTLDAVAWGKEVPVGTGGQFDILYSGKGHKLDKPVDVFHMLRGESS 370
            F+            G+L+++AWGK   +GTG  FDI+YSGKG++  +P+DV+ +L+   +
Sbjct: 1015 FVRAAKMGLSDNLQGSLESLAWGKTPSIGTGSSFDIIYSGKGYEPAEPIDVYTLLQNHVT 1074

Query: 369  LQGNNIEMRIPAYQKNMCDKWGAESLSACDDPITKGCTNSERLLNPVFRRDHSLDDVVKL 190
                 +++ +      M  K  A  L   DD   K C +   +     R   S +D+ KL
Sbjct: 1075 SGTPKVKVTLDE-DGGMDGKSLARRLDRLDDLNKKSCKSEWSITK--LRSFISFNDIKKL 1131

Query: 189  SITLRDILHKSSINEFLSEADKSVVMEALHYHPHSTEKMGTG-PQDIQVGKHPKHGNSRC 13
            S +L+ +L K +I+  L+EADK + M AL +HP   EK+G G PQ+I++G H ++ +SRC
Sbjct: 1132 SQSLKQMLSKYAIDRELNEADKCIAMMALQFHPRRNEKIGKGAPQEIKIGYHKEYEDSRC 1191

Query: 12   FMLM 1
            FML+
Sbjct: 1192 FMLV 1195


>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Solanum tuberosum]
          Length = 1446

 Score =  254 bits (649), Expect = 3e-65
 Identities = 134/304 (44%), Positives = 194/304 (63%), Gaps = 1/304 (0%)
 Frame = -3

Query: 909  LKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYFLRSLK 730
            L+VF+SE+C   K WN L+++ L+I DLIDWERS+PD++HD+   YGID A +YFL  L 
Sbjct: 1108 LQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYFLCKLH 1167

Query: 729  STVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGISKQMDLASISSPFMQACFSNPGSC 550
            S VS+ GK ILPEHL+L AD L+ TGEF+ L+A+G++ Q   A + SPFMQACFSNPG  
Sbjct: 1168 SAVSETGKKILPEHLVLAADSLTATGEFVPLSAKGLTLQRKAAGVISPFMQACFSNPGDS 1227

Query: 549  FIXXXXXXXXXXXXGTLDAVAWGKEVPVGTGGQFDILYSGKGHKLDKPVDVFHMLRGESS 370
            F+            G+L+++AWGK   +GTG  FDI+YSGKG++  +P+DV+ +L+   +
Sbjct: 1228 FVRAAKMGLSDNLQGSLESLAWGKTPSIGTGSSFDIIYSGKGYEPAEPIDVYTLLQNHVT 1287

Query: 369  LQGNNIEMRIPAYQKNMCDKWGAESLSACDDPITKGCTNSERLLNPVFRRDHSLDDVVKL 190
                 +++ +      M  K  A  L   DD   K C +   +     R   S +D+ KL
Sbjct: 1288 SGTPKVKVTLDE-DGGMDGKSLARRLDRLDDLNKKSCKSEWSITK--LRSFISFNDIKKL 1344

Query: 189  SITLRDILHKSSINEFLSEADKSVVMEALHYHPHSTEKMGTG-PQDIQVGKHPKHGNSRC 13
            S +L+ +L K +I+  L+EADK + M AL +HP   EK+G G PQ+I++G H ++ +SRC
Sbjct: 1345 SQSLKQMLSKYAIDRELNEADKCIAMMALQFHPRRNEKIGKGAPQEIKIGYHKEYEDSRC 1404

Query: 12   FMLM 1
            FML+
Sbjct: 1405 FMLV 1408


>ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X4
            [Glycine max]
          Length = 1381

 Score =  253 bits (645), Expect = 1e-64
 Identities = 132/303 (43%), Positives = 187/303 (61%)
 Frame = -3

Query: 909  LKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYFLRSLK 730
            L+V +S      + W +LL    +IM +IDW RSH DNI+   + YGIDA  +YF  SL 
Sbjct: 1047 LRVTLSSEGSRGRFWGVLLKLCHKIMHIIDWTRSHTDNINHFSSAYGIDAGWQYFFNSLA 1106

Query: 729  STVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGISKQMDLASISSPFMQACFSNPGSC 550
               SD GK+ILP+HL LVA+ LS +GEF+GLNA+G++ Q   AS+SSPF+QACF+NPGSC
Sbjct: 1107 CATSDTGKSILPKHLCLVANSLSCSGEFVGLNAKGMALQRKHASVSSPFVQACFANPGSC 1166

Query: 549  FIXXXXXXXXXXXXGTLDAVAWGKEVPVGTGGQFDILYSGKGHKLDKPVDVFHMLRGESS 370
            FI            G+LD +AWG  + +GT G FD++YS KGH++ K VDV+ +L     
Sbjct: 1167 FIKAAKSGATDNLQGSLDGLAWGNCLSMGTSGMFDVIYSEKGHQVAKSVDVYELLEASFD 1226

Query: 369  LQGNNIEMRIPAYQKNMCDKWGAESLSACDDPITKGCTNSERLLNPVFRRDHSLDDVVKL 190
               N I   +  Y     DK G+E        + +G     +    + R   +++D+ KL
Sbjct: 1227 KPNNKIGTHLHKYSS---DKCGSEFRHKNGYALKEG-----KQWKTILRNFVTVNDIQKL 1278

Query: 189  SITLRDILHKSSINEFLSEADKSVVMEALHYHPHSTEKMGTGPQDIQVGKHPKHGNSRCF 10
            +   R IL+K SI+E LSE+D+S ++  L++HPH +EK G GPQDI+VG HPK+ +SRCF
Sbjct: 1279 TFASRCILNKYSIDELLSESDRSTMLRVLNFHPHKSEKFGIGPQDIKVGWHPKYKDSRCF 1338

Query: 9    MLM 1
             ++
Sbjct: 1339 HII 1341


>ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Glycine max]
          Length = 1457

 Score =  253 bits (645), Expect = 1e-64
 Identities = 132/303 (43%), Positives = 187/303 (61%)
 Frame = -3

Query: 909  LKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYFLRSLK 730
            L+V +S      + W +LL    +IM +IDW RSH DNI+   + YGIDA  +YF  SL 
Sbjct: 1123 LRVTLSSEGSRGRFWGVLLKLCHKIMHIIDWTRSHTDNINHFSSAYGIDAGWQYFFNSLA 1182

Query: 729  STVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGISKQMDLASISSPFMQACFSNPGSC 550
               SD GK+ILP+HL LVA+ LS +GEF+GLNA+G++ Q   AS+SSPF+QACF+NPGSC
Sbjct: 1183 CATSDTGKSILPKHLCLVANSLSCSGEFVGLNAKGMALQRKHASVSSPFVQACFANPGSC 1242

Query: 549  FIXXXXXXXXXXXXGTLDAVAWGKEVPVGTGGQFDILYSGKGHKLDKPVDVFHMLRGESS 370
            FI            G+LD +AWG  + +GT G FD++YS KGH++ K VDV+ +L     
Sbjct: 1243 FIKAAKSGATDNLQGSLDGLAWGNCLSMGTSGMFDVIYSEKGHQVAKSVDVYELLEASFD 1302

Query: 369  LQGNNIEMRIPAYQKNMCDKWGAESLSACDDPITKGCTNSERLLNPVFRRDHSLDDVVKL 190
               N I   +  Y     DK G+E        + +G     +    + R   +++D+ KL
Sbjct: 1303 KPNNKIGTHLHKYSS---DKCGSEFRHKNGYALKEG-----KQWKTILRNFVTVNDIQKL 1354

Query: 189  SITLRDILHKSSINEFLSEADKSVVMEALHYHPHSTEKMGTGPQDIQVGKHPKHGNSRCF 10
            +   R IL+K SI+E LSE+D+S ++  L++HPH +EK G GPQDI+VG HPK+ +SRCF
Sbjct: 1355 TFASRCILNKYSIDELLSESDRSTMLRVLNFHPHKSEKFGIGPQDIKVGWHPKYKDSRCF 1414

Query: 9    MLM 1
             ++
Sbjct: 1415 HII 1417


>ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Glycine max]
          Length = 1458

 Score =  253 bits (645), Expect = 1e-64
 Identities = 132/303 (43%), Positives = 187/303 (61%)
 Frame = -3

Query: 909  LKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYFLRSLK 730
            L+V +S      + W +LL    +IM +IDW RSH DNI+   + YGIDA  +YF  SL 
Sbjct: 1124 LRVTLSSEGSRGRFWGVLLKLCHKIMHIIDWTRSHTDNINHFSSAYGIDAGWQYFFNSLA 1183

Query: 729  STVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGISKQMDLASISSPFMQACFSNPGSC 550
               SD GK+ILP+HL LVA+ LS +GEF+GLNA+G++ Q   AS+SSPF+QACF+NPGSC
Sbjct: 1184 CATSDTGKSILPKHLCLVANSLSCSGEFVGLNAKGMALQRKHASVSSPFVQACFANPGSC 1243

Query: 549  FIXXXXXXXXXXXXGTLDAVAWGKEVPVGTGGQFDILYSGKGHKLDKPVDVFHMLRGESS 370
            FI            G+LD +AWG  + +GT G FD++YS KGH++ K VDV+ +L     
Sbjct: 1244 FIKAAKSGATDNLQGSLDGLAWGNCLSMGTSGMFDVIYSEKGHQVAKSVDVYELLEASFD 1303

Query: 369  LQGNNIEMRIPAYQKNMCDKWGAESLSACDDPITKGCTNSERLLNPVFRRDHSLDDVVKL 190
               N I   +  Y     DK G+E        + +G     +    + R   +++D+ KL
Sbjct: 1304 KPNNKIGTHLHKYSS---DKCGSEFRHKNGYALKEG-----KQWKTILRNFVTVNDIQKL 1355

Query: 189  SITLRDILHKSSINEFLSEADKSVVMEALHYHPHSTEKMGTGPQDIQVGKHPKHGNSRCF 10
            +   R IL+K SI+E LSE+D+S ++  L++HPH +EK G GPQDI+VG HPK+ +SRCF
Sbjct: 1356 TFASRCILNKYSIDELLSESDRSTMLRVLNFHPHKSEKFGIGPQDIKVGWHPKYKDSRCF 1415

Query: 9    MLM 1
             ++
Sbjct: 1416 HII 1418


>ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Fragaria
            vesca subsp. vesca]
          Length = 1438

 Score =  251 bits (642), Expect = 2e-64
 Identities = 126/295 (42%), Positives = 183/295 (62%), Gaps = 1/295 (0%)
 Frame = -3

Query: 882  KSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYFLRSLKSTVSDIGKT 703
            K   +WN+L++  + +MD+IDW RSHPDN+HDI   YGID  +K+FL  L+S   D+GKT
Sbjct: 1112 KGTTLWNMLMDDCIPVMDMIDWSRSHPDNVHDICTAYGIDVGQKHFLNKLESATKDVGKT 1171

Query: 702  ILPEHLLLVADCLSVTGEFLGLNARGISKQMDLASISSPFMQACFSNPGSCFIXXXXXXX 523
            ILP+HLLLVADCLS TGEF+ LNA+GI +Q++ AS+ +PFMQACFS PG C +       
Sbjct: 1172 ILPQHLLLVADCLSATGEFVSLNAKGIGQQLEHASVIAPFMQACFSTPGPCLVKAAKVGV 1231

Query: 522  XXXXXGTLDAVAWGKEVPVGTGGQFDILYSGKGHKLDKPVDVFHMLRGESSLQGNNIEMR 343
                 G+LDA+ WG    +G+GGQFDI++S KG    KP+ V+ +L  +      N    
Sbjct: 1232 VDNLQGSLDALTWGNTPSLGSGGQFDIIFS-KGPVSSKPIKVYDLLSSQIITNPQN-GFE 1289

Query: 342  IPAYQKNMCDKWGAESLSACDDPITKGCTNS-ERLLNPVFRRDHSLDDVVKLSITLRDIL 166
            +     ++ DK+ A ++         G     E +   V R + ++ D+ +LS  L++IL
Sbjct: 1290 MSDAPIHLSDKFVAPNM------YKNGYLRKWESITKSVLRENLTIQDIDRLSQALKNIL 1343

Query: 165  HKSSINEFLSEADKSVVMEALHYHPHSTEKMGTGPQDIQVGKHPKHGNSRCFMLM 1
             K  +NE +++ DK V+M  L +HPH   K+G G ++++VG HP H N RCFML+
Sbjct: 1344 QKYDVNERINDMDKQVLMMVLRFHPHGDRKIGLGIKEVKVGHHPDHENVRCFMLV 1398


>ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
            gi|355512499|gb|AES94122.1| DNA-directed RNA polymerase
            subunit beta [Medicago truncatula]
          Length = 1687

 Score =  248 bits (634), Expect = 2e-63
 Identities = 135/304 (44%), Positives = 190/304 (62%), Gaps = 1/304 (0%)
 Frame = -3

Query: 909  LKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYFLRSLK 730
            L+V +S    +   W  L+N    IM LIDW RSHPDNIH   + +GIDA  +++  +L 
Sbjct: 1302 LRVTMSSGNDNGTFWGRLINHCHRIMPLIDWTRSHPDNIHHFCSAFGIDAGWQHYFHNLS 1361

Query: 729  STVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGISKQMDLASISSPFMQACFSNPGSC 550
            S  SD GK+ILP+HL LVA+ LS +GEF+GLNA+G+++Q   AS+SSPF+QACFSNPGS 
Sbjct: 1362 SATSDTGKSILPKHLRLVANSLSASGEFVGLNAKGMARQRKHASVSSPFVQACFSNPGSS 1421

Query: 549  FIXXXXXXXXXXXXGTLDAVAWGKEVPVGTGGQFDILYSGKGHKLDKPVDVFHMLRGESS 370
            F+            G LDA+AWG  +P+GTGGQFDI+YS K  +++K VDV+ +L  E+S
Sbjct: 1422 FLKAAKSGIVDNLQGNLDALAWGNCLPMGTGGQFDIIYSEKVEEINKSVDVYGLL--ETS 1479

Query: 369  LQGNNIEMRIPAYQKNMCDKWGAESLSACDDPITKGCTNSE-RLLNPVFRRDHSLDDVVK 193
                + E+ IP  +K    K  ++  S        G T  E +    V R   + +D+ +
Sbjct: 1480 FNQMDQEINIPQSRKYSSGKCSSDFRSK-----NGGYTPKEPKQWKSVLRNFMTANDIQR 1534

Query: 192  LSITLRDILHKSSINEFLSEADKSVVMEALHYHPHSTEKMGTGPQDIQVGKHPKHGNSRC 13
            L+   R IL+K  I+E LSE DK  +M+ LH+HP   EK G+GPQ+I+VG HP+  +SRC
Sbjct: 1535 LTFDARVILNKYQIDETLSETDKLTIMKVLHFHPRRDEKFGSGPQNIKVGWHPEFTDSRC 1594

Query: 12   FMLM 1
            F ++
Sbjct: 1595 FFII 1598


>ref|XP_007158454.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
            gi|561031869|gb|ESW30448.1| hypothetical protein
            PHAVU_002G153700g [Phaseolus vulgaris]
          Length = 1464

 Score =  247 bits (631), Expect = 4e-63
 Identities = 130/303 (42%), Positives = 189/303 (62%)
 Frame = -3

Query: 909  LKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYFLRSLK 730
            L+V V+ +  + + W +L+N   +IM +IDW RSHPDNI+ + + YGID A +Y+ +SL 
Sbjct: 1120 LRVTVASSGNTGRFWGVLVNHCHKIMQIIDWPRSHPDNINYLSSAYGIDVAWQYYYKSLA 1179

Query: 729  STVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGISKQMDLASISSPFMQACFSNPGSC 550
            S +SD GK+ILP+HL L+A+ +S +GEF+GLNA+G+++Q   AS+SSPF+QACFSNPG  
Sbjct: 1180 SAISDTGKSILPKHLRLLANSMSASGEFVGLNAKGMAQQRQHASVSSPFVQACFSNPGRS 1239

Query: 549  FIXXXXXXXXXXXXGTLDAVAWGKEVPVGTGGQFDILYSGKGHKLDKPVDVFHMLRGESS 370
            FI            G+LDA+AWG    +GT G FDI+YS KGH++DK VDV+ +L     
Sbjct: 1240 FIKAAKSELTDNLQGSLDALAWGNCPSMGTSGLFDIIYSEKGHEVDKAVDVYKLLEASFD 1299

Query: 369  LQGNNIEMRIPAYQKNMCDKWGAESLSACDDPITKGCTNSERLLNPVFRRDHSLDDVVKL 190
               N I         N   K G+E          +G     +    + R   +++D+ KL
Sbjct: 1300 KPNNKIGFHA---HNNSSGKCGSEFRHKNGYAFKEG-----KQWKNILRNFVTVNDIQKL 1351

Query: 189  SITLRDILHKSSINEFLSEADKSVVMEALHYHPHSTEKMGTGPQDIQVGKHPKHGNSRCF 10
            +   R IL+K  I+E LSE D+S ++  L++HP  +EK+G GPQDI+VG HPK  +SRCF
Sbjct: 1352 TTASRCILNKYEIDELLSEFDRSTILRVLNFHPRRSEKLGIGPQDIKVGWHPKFKDSRCF 1411

Query: 9    MLM 1
             ++
Sbjct: 1412 HIV 1414


>ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
            gi|561031868|gb|ESW30447.1| hypothetical protein
            PHAVU_002G153700g [Phaseolus vulgaris]
          Length = 1463

 Score =  247 bits (631), Expect = 4e-63
 Identities = 130/303 (42%), Positives = 189/303 (62%)
 Frame = -3

Query: 909  LKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYFLRSLK 730
            L+V V+ +  + + W +L+N   +IM +IDW RSHPDNI+ + + YGID A +Y+ +SL 
Sbjct: 1119 LRVTVASSGNTGRFWGVLVNHCHKIMQIIDWPRSHPDNINYLSSAYGIDVAWQYYYKSLA 1178

Query: 729  STVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGISKQMDLASISSPFMQACFSNPGSC 550
            S +SD GK+ILP+HL L+A+ +S +GEF+GLNA+G+++Q   AS+SSPF+QACFSNPG  
Sbjct: 1179 SAISDTGKSILPKHLRLLANSMSASGEFVGLNAKGMAQQRQHASVSSPFVQACFSNPGRS 1238

Query: 549  FIXXXXXXXXXXXXGTLDAVAWGKEVPVGTGGQFDILYSGKGHKLDKPVDVFHMLRGESS 370
            FI            G+LDA+AWG    +GT G FDI+YS KGH++DK VDV+ +L     
Sbjct: 1239 FIKAAKSELTDNLQGSLDALAWGNCPSMGTSGLFDIIYSEKGHEVDKAVDVYKLLEASFD 1298

Query: 369  LQGNNIEMRIPAYQKNMCDKWGAESLSACDDPITKGCTNSERLLNPVFRRDHSLDDVVKL 190
               N I         N   K G+E          +G     +    + R   +++D+ KL
Sbjct: 1299 KPNNKIGFHA---HNNSSGKCGSEFRHKNGYAFKEG-----KQWKNILRNFVTVNDIQKL 1350

Query: 189  SITLRDILHKSSINEFLSEADKSVVMEALHYHPHSTEKMGTGPQDIQVGKHPKHGNSRCF 10
            +   R IL+K  I+E LSE D+S ++  L++HP  +EK+G GPQDI+VG HPK  +SRCF
Sbjct: 1351 TTASRCILNKYEIDELLSEFDRSTILRVLNFHPRRSEKLGIGPQDIKVGWHPKFKDSRCF 1410

Query: 9    MLM 1
             ++
Sbjct: 1411 HIV 1413


>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D subunit 1 [Solanum
            lycopersicum]
          Length = 1446

 Score =  246 bits (628), Expect = 9e-63
 Identities = 131/304 (43%), Positives = 189/304 (62%), Gaps = 1/304 (0%)
 Frame = -3

Query: 909  LKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYFLRSLK 730
            L+VF+SE+C   K WN L+++ L+I DLIDWERS+PD++HD+   YGID A +YFL  L 
Sbjct: 1108 LQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYFLCKLH 1167

Query: 729  STVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGISKQMDLASISSPFMQACFSNPGSC 550
            S VS+ GK ILPEHL+L AD L+ TGEF+ L+A+G++ Q   A + SPFMQACF+NPG  
Sbjct: 1168 SAVSETGKKILPEHLVLAADSLTTTGEFVPLSAKGLTLQRKAAGVVSPFMQACFTNPGDS 1227

Query: 549  FIXXXXXXXXXXXXGTLDAVAWGKEVPVGTGGQFDILYSGKGHKLDKPVDVFHMLRGESS 370
            F+            G+L+++AWGK   +GTG  FDI+YSGKG++L + ++V+ +LR   +
Sbjct: 1228 FVRAAKMGLSDDLQGSLESLAWGKTPSIGTGSSFDIMYSGKGYELAEQINVYTLLRNLVT 1287

Query: 369  LQGNNIEMRIPAYQKNMCDKWGAESLSACDDPITKGCTNSERLLNPVFRRDHSLDDVVKL 190
            +   N+++ +      M        L   DD   K C     L     R   S +D+ KL
Sbjct: 1288 VDTPNVKVTL-GKDGGMDGMSLVRRLDRLDDLDKKSC--KSELSFTKLRSYFSFNDIKKL 1344

Query: 189  SITLRDILHKSSINEFLSEADKSVVMEALHYHPHSTEKMGTG-PQDIQVGKHPKHGNSRC 13
            S +L+ +L K  I   L+EADK + M AL +HP   EK+G G P++I++G H +   SRC
Sbjct: 1345 SQSLKQMLSKYDIGRELNEADKCLAMMALQFHPRRNEKIGKGAPKEIKIGYHQEFEGSRC 1404

Query: 12   FMLM 1
            FM++
Sbjct: 1405 FMVV 1408