BLASTX nr result

ID: Akebia22_contig00038487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00038487
         (260 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC78894.1| hypothetical protein (mitochondrion) [Vicia faba]...    83   5e-14
gb|EXB29791.1| hypothetical protein L484_008955 [Morus notabilis]      79   5e-13
ref|XP_003588306.1| Ribosomal protein S3 [Medicago truncatula] g...    66   4e-09
ref|XP_002531802.1| conserved hypothetical protein [Ricinus comm...    58   1e-06

>gb|AGC78894.1| hypothetical protein (mitochondrion) [Vicia faba]
           gi|442803272|gb|AGC79007.1| hypothetical protein
           (mitochondrion) [Vicia faba]
          Length = 602

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 40/45 (88%), Positives = 40/45 (88%)
 Frame = +3

Query: 123 MGQRIKRFDFVPRDPPQVGFESRVMGYYPARFGEHL*SALVNGSP 257
           MGQRIKRFDFV RD PQVGFESRVMG YPARFGEH  SALVNGSP
Sbjct: 1   MGQRIKRFDFVSRDSPQVGFESRVMGDYPARFGEHFLSALVNGSP 45


>gb|EXB29791.1| hypothetical protein L484_008955 [Morus notabilis]
          Length = 69

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 33/37 (89%), Positives = 35/37 (94%)
 Frame = -1

Query: 257 GASIHQRRLQVLSEPCWIVTHHTALKPNLWWIPGDKV 147
           GASIHQRRL+VLSEPCWIVTHHTALKPNLWWIP D +
Sbjct: 17  GASIHQRRLKVLSEPCWIVTHHTALKPNLWWIPADVI 53


>ref|XP_003588306.1| Ribosomal protein S3 [Medicago truncatula]
           gi|355477354|gb|AES58557.1| Ribosomal protein S3
           [Medicago truncatula]
          Length = 306

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 31/34 (91%), Positives = 31/34 (91%)
 Frame = +3

Query: 123 MGQRIKRFDFVPRDPPQVGFESRVMGYYPARFGE 224
           MGQRIKRFDFV RD PQVGFESRVMG YPARFGE
Sbjct: 1   MGQRIKRFDFVSRDSPQVGFESRVMGDYPARFGE 34


>ref|XP_002531802.1| conserved hypothetical protein [Ricinus communis]
           gi|223528568|gb|EEF30590.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 72

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/56 (57%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
 Frame = -1

Query: 257 GASIHQRRLQVLSEPCWIVTHHTALKPNLW-WIPGDKVKALDPLPHTLRCSSPPIK 93
           G SI Q RL+VL EPC I+T++T           GD VKALDPLPHTL+ SS PIK
Sbjct: 17  GPSIQQCRLKVLCEPCRIITYYTTHSSQTCDGSQGDNVKALDPLPHTLKGSSTPIK 72


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