BLASTX nr result
ID: Akebia22_contig00038141
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia22_contig00038141 (322 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEJ72569.1| putative reverse transcriptase family member [Mal... 45 5e-06 emb|CCH50976.1| T4.15 [Malus x robusta] 45 7e-06 >gb|AEJ72569.1| putative reverse transcriptase family member [Malus domestica] Length = 212 Score = 45.1 bits (105), Expect(3) = 5e-06 Identities = 23/51 (45%), Positives = 29/51 (56%) Frame = +2 Query: 74 QIEGKFCSTEIRPAMPFGASCWAMKKYHVLQMSVNIDEDFETDGGETRKTK 226 +++GKF T IRPAM +G CWA+K HV +M V G TRK K Sbjct: 66 KLKGKFYRTTIRPAMLYGTECWAVKYQHVHKMGVAEMRMLRWMCGHTRKDK 116 Score = 27.7 bits (60), Expect(3) = 5e-06 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +1 Query: 205 GRD*EDKIRHEDISGNLGIVLIEDEISCSR 294 G +DKIR+EDI G +G+ IE + +R Sbjct: 110 GHTRKDKIRNEDIRGKVGVAEIEGNMRENR 139 Score = 22.3 bits (46), Expect(3) = 5e-06 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = +3 Query: 48 VLCYRSVPIKLKENF 92 VLC R +P+KLK F Sbjct: 57 VLCDRCMPLKLKGKF 71 >emb|CCH50976.1| T4.15 [Malus x robusta] Length = 986 Score = 45.4 bits (106), Expect(3) = 7e-06 Identities = 23/51 (45%), Positives = 29/51 (56%) Frame = +2 Query: 74 QIEGKFCSTEIRPAMPFGASCWAMKKYHVLQMSVNIDEDFETDGGETRKTK 226 +++GKF T IRPAM +G CWA+K HV +M V G TRK K Sbjct: 840 KLKGKFYRTAIRPAMLYGTECWAVKHQHVHKMGVAEMRMLRWMCGHTRKDK 890 Score = 26.6 bits (57), Expect(3) = 7e-06 Identities = 11/26 (42%), Positives = 18/26 (69%) Frame = +1 Query: 205 GRD*EDKIRHEDISGNLGIVLIEDEI 282 G +DKIR+EDI G +G+ I+ ++ Sbjct: 884 GHTRKDKIRNEDIRGKVGVAEIQGKM 909 Score = 22.3 bits (46), Expect(3) = 7e-06 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = +3 Query: 48 VLCYRSVPIKLKENF 92 VLC R +P+KLK F Sbjct: 831 VLCDRRMPLKLKGKF 845