BLASTX nr result

ID: Akebia22_contig00037278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00037278
         (235 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB76229.1| DNA repair protein RAD51-3-like protein [Morus no...    64   3e-08
ref|XP_007220405.1| hypothetical protein PRUPE_ppa007713mg [Prun...    61   2e-07
ref|XP_002511689.1| DNA repair and recombination protein radA, p...    60   2e-07
gb|ADE75901.1| unknown [Picea sitchensis]                              57   2e-06
ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog ...    57   2e-06
ref|XP_006345516.1| PREDICTED: DNA repair protein RAD51 homolog ...    55   8e-06

>gb|EXB76229.1| DNA repair protein RAD51-3-like protein [Morus notabilis]
          Length = 346

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 34/63 (53%), Positives = 42/63 (66%)
 Frame = -3

Query: 200 MEVCGLPLSPTQRAKLVSAGYATXXXXXXXXXLDLARDLNVSHHEALQILKVALQSSRFD 21
           MEV  LP+S +QR KL+ AGY T          DLAR+LNV++ EAL+ILKVA  +SR D
Sbjct: 1   MEVGRLPISASQRGKLIRAGYTTLSSLSSLSPSDLARELNVTNSEALEILKVASLNSRLD 60

Query: 20  RLD 12
           R D
Sbjct: 61  RTD 63


>ref|XP_007220405.1| hypothetical protein PRUPE_ppa007713mg [Prunus persica]
           gi|462416867|gb|EMJ21604.1| hypothetical protein
           PRUPE_ppa007713mg [Prunus persica]
          Length = 358

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 32/66 (48%), Positives = 40/66 (60%)
 Frame = -3

Query: 200 MEVCGLPLSPTQRAKLVSAGYATXXXXXXXXXLDLARDLNVSHHEALQILKVALQSSRFD 21
           MEV  LP+S +QR KL+SAGY T          DLARDL +   EA +ILKVA    R D
Sbjct: 1   MEVGRLPISASQRGKLISAGYTTLASLSSLSSSDLARDLKIPESEAFEILKVASHDCRLD 60

Query: 20  RLDQTN 3
           + D++N
Sbjct: 61  QPDKSN 66


>ref|XP_002511689.1| DNA repair and recombination protein radA, putative [Ricinus
           communis] gi|223548869|gb|EEF50358.1| DNA repair and
           recombination protein radA, putative [Ricinus communis]
          Length = 346

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/63 (50%), Positives = 41/63 (65%)
 Frame = -3

Query: 200 MEVCGLPLSPTQRAKLVSAGYATXXXXXXXXXLDLARDLNVSHHEALQILKVALQSSRFD 21
           MEV  LPLS +QR KL+ AGY +          DLARDL +S  EAL+ILKVA ++SR D
Sbjct: 1   MEVSRLPLSASQRGKLILAGYTSLSSLSSVSPSDLARDLKISDSEALEILKVASRNSRLD 60

Query: 20  RLD 12
            ++
Sbjct: 61  GME 63


>gb|ADE75901.1| unknown [Picea sitchensis]
          Length = 346

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/60 (53%), Positives = 38/60 (63%)
 Frame = -3

Query: 200 MEVCGLPLSPTQRAKLVSAGYATXXXXXXXXXLDLARDLNVSHHEALQILKVALQSSRFD 21
           ME   LPL+P+ RA+LVSAGY T         LDLARD+ VS  EAL ILKVA ++   D
Sbjct: 1   METICLPLAPSHRARLVSAGYRTLDSFNNLSPLDLARDIGVSSEEALDILKVAWRTKAID 60


>ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Vitis vinifera]
           gi|296089196|emb|CBI38899.3| unnamed protein product
           [Vitis vinifera]
          Length = 346

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/63 (46%), Positives = 40/63 (63%)
 Frame = -3

Query: 200 MEVCGLPLSPTQRAKLVSAGYATXXXXXXXXXLDLARDLNVSHHEALQILKVALQSSRFD 21
           ME+  LP+S +QR KL+SAGY +           LA+DL +S +EAL+IL+V  Q SR D
Sbjct: 1   MELARLPISASQRGKLISAGYTSLSSLSSLSPSTLAQDLKISDNEALEILRVVSQGSRLD 60

Query: 20  RLD 12
           + D
Sbjct: 61  KPD 63


>ref|XP_006345516.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Solanum
           tuberosum]
          Length = 346

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/66 (43%), Positives = 41/66 (62%)
 Frame = -3

Query: 200 MEVCGLPLSPTQRAKLVSAGYATXXXXXXXXXLDLARDLNVSHHEALQILKVALQSSRFD 21
           MEV  LP+S + RAKL+S GY +          D+ARDL +S +EAL+IL+VA Q    +
Sbjct: 1   MEVSSLPISASLRAKLISGGYTSISSLFSVSHSDIARDLKISENEALEILRVASQRRGSE 60

Query: 20  RLDQTN 3
           R + T+
Sbjct: 61  RSNGTS 66


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