BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00034479
         (1083 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]   226   2e-56
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...   216   2e-53
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   215   3e-53
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc...   215   3e-53
gb|AAP94600.1| putative copia-like retrotransposon Hopscotch pol...   214   4e-53
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...   214   4e-53
gb|ABA97707.2| retrotransposon protein, putative, Ty1-copia subc...   214   4e-53
gb|AAU90262.1| integrase core domain containing protein [Oryza s...   214   5e-53
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group...   214   5e-53
gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subc...   213   1e-52
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  211   3e-52
gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subc...   210   7e-52
gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc...   210   9e-52
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group...   210   9e-52
gb|ABF99203.1| retrotransposon protein, putative, Ty1-copia subc...   209   1e-51
gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Ho...   209   1e-51
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]     208   3e-51
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   208   4e-51
gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [...   208   4e-51
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]   206   1e-50

>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score =  226 bits (575), Expect = 2e-56
 Identities = 113/211 (53%), Positives = 141/211 (66%), Gaps = 1/211 (0%)
 Frame = -3

Query: 1081 KICFIQSDWGGEFRSFNTILQSFGISHRLSCPYTHSQNGSVECKHRHVVETGLALLAHSS 902
            KI  +QSDWGGE+RSF   L S GI HR+SCPYTH QNG  E KHRH+VE G+ALLA +S
Sbjct: 625  KIKAVQSDWGGEYRSFTQYLTSNGIIHRISCPYTHEQNGLAERKHRHIVEHGIALLAQAS 684

Query: 901  LPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHHKPDYLFLKTFGCQCWPNLRPYNK 722
            LP+ YW +AF T+V+LINRLP+P L NKSP E+LFH KP Y  LK FGC C+PNLRP+N 
Sbjct: 685  LPFKYWDEAFRTSVYLINRLPTPVLKNKSPLEVLFHQKPSYSXLKVFGCMCYPNLRPFNH 744

Query: 721  NKMHFQSLPCVFLGHSPSHHGHMCFHVPTARMYISRDVLFDEHCXXXXXXXXXXXXXXXX 542
            +K+ F+S+PC FLG+S +H G+ C   P   + ISRDV+FDE                  
Sbjct: 745  HKLQFRSIPCTFLGYSLNHKGYKCLS-PNGNILISRDVIFDEXAFPFAQLQSQKQXTSSF 803

Query: 541  XXXXXSLPFHLT-PHSRLPSNDNQSSSRPTH 452
                 SLP   + P   LPS+ + S+S PT+
Sbjct: 804  SSSXTSLPCQTSLPLMVLPSSTSCSTSSPTN 834



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 25/64 (39%), Positives = 40/64 (62%)
 Frame = -3

Query: 202  PRAYITTSAVPEEPTSFSQVSKFSEWRLAMPHEFDALMSTNTWSLVPPASHQNIVGYRWI 23
            P+AY+ ++     PTS  +  + S W+ AM  E+ AL+  NTW LVPP + + ++G +W+
Sbjct: 874  PKAYLISTT----PTSVPEALQLSHWKQAMTDEYLALLRNNTWDLVPPPTDRKLIGCKWV 929

Query: 22   FKTK 11
            FK K
Sbjct: 930  FKVK 933


>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108708884|gb|ABF96679.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1437

 Score =  216 bits (549), Expect = 2e-53
 Identities = 95/162 (58%), Positives = 119/162 (73%)
 Frame = -3

Query: 1081 KICFIQSDWGGEFRSFNTILQSFGISHRLSCPYTHSQNGSVECKHRHVVETGLALLAHSS 902
            KI  +Q+DWGGE++  ++     GI+H +SCP+TH QNGS E KHRH+VE GLALLA+SS
Sbjct: 574  KIVAMQTDWGGEYQKLHSFFNKVGITHHVSCPHTHQQNGSAERKHRHIVEVGLALLAYSS 633

Query: 901  LPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHHKPDYLFLKTFGCQCWPNLRPYNK 722
            +P  +W +AFL+AV+LINR PS  LH+ SP E L  HKPDY  L+ FGC CWPNLRPYNK
Sbjct: 634  MPLKFWGEAFLSAVYLINRTPSRVLHDVSPLERLLGHKPDYNALRVFGCACWPNLRPYNK 693

Query: 721  NKMHFQSLPCVFLGHSPSHHGHMCFHVPTARMYISRDVLFDE 596
            +K+ F+S  C FLG+S  H G  C    T R+YISRDV+FDE
Sbjct: 694  HKLQFRSTTCTFLGYSTLHKGFKCLDPSTGRVYISRDVVFDE 735



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 29/86 (33%), Positives = 47/86 (54%)
 Frame = -3

Query: 268  TRSKTHTTCPKIQTDGTVSWPPPRAYITTSAVPEEPTSFSQVSKFSEWRLAMPHEFDALM 89
            TR ++     K+ TDGTV W      +T++    EP +     + + W+ AM  E+ AL+
Sbjct: 895  TRLQSGIRKEKVYTDGTVKW----GMLTSTG---EPENLQDALQNNNWKCAMDAEYMALI 947

Query: 88   STNTWSLVPPASHQNIVGYRWIFKTK 11
              NTW LVPP   +N++  +W++K K
Sbjct: 948  KNNTWHLVPPQQGRNVIDCKWVYKIK 973


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  215 bits (547), Expect = 3e-53
 Identities = 94/163 (57%), Positives = 118/163 (72%)
 Frame = -3

Query: 1081 KICFIQSDWGGEFRSFNTILQSFGISHRLSCPYTHSQNGSVECKHRHVVETGLALLAHSS 902
            KI  +Q+DWGGE++S N+     GI H +SCP+TH QNGS E KHRH+VE GL+LL+H+S
Sbjct: 570  KILAMQTDWGGEYQSLNSFFSKIGIVHHVSCPHTHQQNGSAERKHRHIVEIGLSLLSHAS 629

Query: 901  LPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHHKPDYLFLKTFGCQCWPNLRPYNK 722
            +P  +W +AF  A +LINR+PS  +HN SP E LF  KPDY  L+ FGC CWPNLRPYN 
Sbjct: 630  MPLKFWDEAFQVATYLINRVPSRVIHNISPLEKLFKQKPDYSSLRIFGCACWPNLRPYNN 689

Query: 721  NKMHFQSLPCVFLGHSPSHHGHMCFHVPTARMYISRDVLFDEH 593
            +K+ F+S  CVFLG S  H G  C  V T R+YISRDV+FDE+
Sbjct: 690  HKLQFRSKRCVFLGFSTMHKGFKCLEVSTGRIYISRDVVFDEN 732



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 33/86 (38%), Positives = 50/86 (58%)
 Frame = -3

Query: 268  TRSKTHTTCPKIQTDGTVSWPPPRAYITTSAVPEEPTSFSQVSKFSEWRLAMPHEFDALM 89
            TR ++     K+ TDGT+ +    ++ T S    EPT+  +  K   W+LAM  E+DAL+
Sbjct: 915  TRLQSGVRKEKVYTDGTIKYK--HSWFTASG---EPTNDLEALKDKNWKLAMDSEYDALV 969

Query: 88   STNTWSLVPPASHQNIVGYRWIFKTK 11
               TW LVPP   +NI+G +W++K K
Sbjct: 970  KNKTWHLVPPQRGRNIIGCKWVYKIK 995


>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1478

 Score =  215 bits (547), Expect = 3e-53
 Identities = 94/163 (57%), Positives = 118/163 (72%)
 Frame = -3

Query: 1081 KICFIQSDWGGEFRSFNTILQSFGISHRLSCPYTHSQNGSVECKHRHVVETGLALLAHSS 902
            KI  +Q+DWGGE++S N+     GI H +SCP+TH QNGS E KHRH+VE GL+LL+H+S
Sbjct: 603  KILAMQTDWGGEYQSLNSFFSKIGIVHHVSCPHTHQQNGSAERKHRHIVEIGLSLLSHAS 662

Query: 901  LPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHHKPDYLFLKTFGCQCWPNLRPYNK 722
            +P  +W +AF  A +LINR+PS  +HN SP E LF  KPDY  L+ FGC CWPNLRPYN 
Sbjct: 663  MPLKFWDEAFQAATYLINRVPSRVIHNISPLEKLFKQKPDYSSLRIFGCACWPNLRPYNN 722

Query: 721  NKMHFQSLPCVFLGHSPSHHGHMCFHVPTARMYISRDVLFDEH 593
            +K+ F+S  CVFLG S  H G  C  V T R+YISRDV+FDE+
Sbjct: 723  HKLQFRSKRCVFLGFSTMHKGFKCLEVSTGRIYISRDVVFDEN 765



 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 24/52 (46%), Positives = 34/52 (65%)
 Frame = -3

Query: 166  EPTSFSQVSKFSEWRLAMPHEFDALMSTNTWSLVPPASHQNIVGYRWIFKTK 11
            EPT+  +  K   W+LAM  E+DAL+   TW LVPP   +NI+G +W++K K
Sbjct: 937  EPTNDLEALKDKNWKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIK 988


>gb|AAP94600.1| putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 969

 Score =  214 bits (546), Expect = 4e-53
 Identities = 93/163 (57%), Positives = 118/163 (72%)
 Frame = -3

Query: 1081 KICFIQSDWGGEFRSFNTILQSFGISHRLSCPYTHSQNGSVECKHRHVVETGLALLAHSS 902
            KI  +Q+DWGGE++  NT     GISH +SCP+ H QNGS E KHRH+VE GL+LLAH+S
Sbjct: 423  KILAVQTDWGGEYQRLNTFFNKIGISHLVSCPHAHQQNGSAERKHRHIVEVGLSLLAHAS 482

Query: 901  LPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHHKPDYLFLKTFGCQCWPNLRPYNK 722
            +P  +W +AFL A +LINR P+  L+  +PFE LFH +PDY  L+ FGC CWPNLRPYN 
Sbjct: 483  MPLKFWDEAFLAAAYLINRTPTKILNLDTPFERLFHKQPDYSVLRIFGCVCWPNLRPYNS 542

Query: 721  NKMHFQSLPCVFLGHSPSHHGHMCFHVPTARMYISRDVLFDEH 593
            +K+ F+S  CVFLG+S  H G  C  V T R+Y+SRDV FDE+
Sbjct: 543  HKLQFRSKQCVFLGYSSLHKGFKCLDVSTGRVYVSRDVTFDEN 585



 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 30/86 (34%), Positives = 45/86 (52%)
 Frame = -3

Query: 268  TRSKTHTTCPKIQTDGTVSWPPPRAYITTSAVPEEPTSFSQVSKFSEWRLAMPHEFDALM 89
            TR +     PK+ TDGT+ +       T+S    EP   ++      W+ AM  E+ ALM
Sbjct: 777  TRLQQGVRKPKVYTDGTIRY----GCFTSSG---EPYDLNEALGDVNWKDAMDIEYSALM 829

Query: 88   STNTWSLVPPASHQNIVGYRWIFKTK 11
               TW LVPP   +N++G +W++K K
Sbjct: 830  KNKTWHLVPPKKGRNVIGCKWVYKIK 855


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 1313

 Score =  214 bits (546), Expect = 4e-53
 Identities = 93/163 (57%), Positives = 118/163 (72%)
 Frame = -3

Query: 1081 KICFIQSDWGGEFRSFNTILQSFGISHRLSCPYTHSQNGSVECKHRHVVETGLALLAHSS 902
            KI  +Q+DWGGE++  NT     GISH +SCP+ H QNGS E KHRH+VE GL+LLAH+S
Sbjct: 423  KILAVQTDWGGEYQRLNTFFNKIGISHLVSCPHAHQQNGSAERKHRHIVEVGLSLLAHAS 482

Query: 901  LPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHHKPDYLFLKTFGCQCWPNLRPYNK 722
            +P  +W +AFL A +LINR P+  L+  +PFE LFH +PDY  L+ FGC CWPNLRPYN 
Sbjct: 483  MPLKFWDEAFLAAAYLINRTPTKILNLDTPFERLFHKQPDYSVLRIFGCVCWPNLRPYNS 542

Query: 721  NKMHFQSLPCVFLGHSPSHHGHMCFHVPTARMYISRDVLFDEH 593
            +K+ F+S  CVFLG+S  H G  C  V T R+Y+SRDV FDE+
Sbjct: 543  HKLQFRSKQCVFLGYSSLHKGFKCLDVSTGRVYVSRDVTFDEN 585



 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 30/86 (34%), Positives = 45/86 (52%)
 Frame = -3

Query: 268  TRSKTHTTCPKIQTDGTVSWPPPRAYITTSAVPEEPTSFSQVSKFSEWRLAMPHEFDALM 89
            TR +     PK+ TDGT+ +       T+S    EP   ++      W+ AM  E+ ALM
Sbjct: 777  TRLQQGVRKPKVYTDGTIRY----GCFTSSG---EPYDLNEALGDVNWKDAMDIEYSALM 829

Query: 88   STNTWSLVPPASHQNIVGYRWIFKTK 11
               TW LVPP   +N++G +W++K K
Sbjct: 830  KNKTWHLVPPKKGRNVIGCKWVYKIK 855


>gb|ABA97707.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1001

 Score =  214 bits (546), Expect = 4e-53
 Identities = 93/163 (57%), Positives = 119/163 (73%)
 Frame = -3

Query: 1081 KICFIQSDWGGEFRSFNTILQSFGISHRLSCPYTHSQNGSVECKHRHVVETGLALLAHSS 902
            KI  +Q+DWGGE+   N+     GISHR+SCP+ H QNG+ E KHRH+VE GLALLAH+S
Sbjct: 315  KIIAMQTDWGGEYEKLNSFFTKIGISHRVSCPHAHQQNGAAERKHRHIVEVGLALLAHAS 374

Query: 901  LPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHHKPDYLFLKTFGCQCWPNLRPYNK 722
            +P  +W +AF TA +LINR P+ T++  +P E LFH KP+Y  L+TFGC CWPNLRPYN 
Sbjct: 375  MPLKFWDEAFCTATYLINRTPAKTINFDTPLERLFHQKPEYASLRTFGCACWPNLRPYNS 434

Query: 721  NKMHFQSLPCVFLGHSPSHHGHMCFHVPTARMYISRDVLFDEH 593
             K+ F+S  CVFLG+S  + G  C HV T R+YISRDV+F E+
Sbjct: 435  KKLVFRSTQCVFLGYSRLYKGFKCLHVSTGRIYISRDVIFYEN 477


>gb|AAU90262.1| integrase core domain containing protein [Oryza sativa Japonica
            Group] gi|108710062|gb|ABF97857.1| retrotransposon
            protein, putative, Ty1-copia subclass, expressed [Oryza
            sativa Japonica Group]
          Length = 1021

 Score =  214 bits (545), Expect = 5e-53
 Identities = 94/163 (57%), Positives = 116/163 (71%)
 Frame = -3

Query: 1081 KICFIQSDWGGEFRSFNTILQSFGISHRLSCPYTHSQNGSVECKHRHVVETGLALLAHSS 902
            KI  +QSDWGGE+   N I    GI+H +SCPY H QNGS E KHRH+VE GL+LLAH+S
Sbjct: 491  KIIAMQSDWGGEYEKLNAIFTKIGITHHVSCPYAHQQNGSAERKHRHIVEVGLSLLAHAS 550

Query: 901  LPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHHKPDYLFLKTFGCQCWPNLRPYNK 722
            +P  +W +AFLTA +LINR PS  +   +P E L + KP+Y  L+TFGC CWPNLRPYN 
Sbjct: 551  MPLKFWDEAFLTATYLINRTPSKVIQYSTPLERLLNQKPNYSSLRTFGCACWPNLRPYNN 610

Query: 721  NKMHFQSLPCVFLGHSPSHHGHMCFHVPTARMYISRDVLFDEH 593
             K+ F+S  CVFLG+S  H G  C  V T R+YISRDV+FDE+
Sbjct: 611  RKLQFRSKQCVFLGYSNIHKGFKCLDVATGRVYISRDVVFDEN 653


>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1256

 Score =  214 bits (545), Expect = 5e-53
 Identities = 93/162 (57%), Positives = 117/162 (72%)
 Frame = -3

Query: 1081 KICFIQSDWGGEFRSFNTILQSFGISHRLSCPYTHSQNGSVECKHRHVVETGLALLAHSS 902
            KI  +Q+DWGGE++  NT     GI+H +SCP+TH QNGS E KHRH+VE GL+LLAH+S
Sbjct: 405  KIISMQTDWGGEYQKLNTFFNKIGITHHVSCPHTHQQNGSAERKHRHIVEVGLSLLAHAS 464

Query: 901  LPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHHKPDYLFLKTFGCQCWPNLRPYNK 722
            LP  +W +A+ + V+LINR+P+  L   SP E LF   PDY  L+TFGC CWP+LRPYN 
Sbjct: 465  LPLKFWDEAYQSGVYLINRMPTKVLGYSSPLECLFKQTPDYQALRTFGCACWPDLRPYNS 524

Query: 721  NKMHFQSLPCVFLGHSPSHHGHMCFHVPTARMYISRDVLFDE 596
            +KMHF+S  C FLG+SP H G  C    T R+YISRDV+FDE
Sbjct: 525  HKMHFRSKRCTFLGYSPLHKGFRCLDSSTGRIYISRDVVFDE 566


>gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1016

 Score =  213 bits (542), Expect = 1e-52
 Identities = 94/163 (57%), Positives = 116/163 (71%)
 Frame = -3

Query: 1081 KICFIQSDWGGEFRSFNTILQSFGISHRLSCPYTHSQNGSVECKHRHVVETGLALLAHSS 902
            KI  +Q+DWGGE+   ++     GISH +SCPY H QNGS E KHRH+VE GLALLAH+S
Sbjct: 187  KIISMQTDWGGEYEKLHSFFTKIGISHHVSCPYAHQQNGSAERKHRHIVEVGLALLAHAS 246

Query: 901  LPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHHKPDYLFLKTFGCQCWPNLRPYNK 722
            +P  +W +AFL A +LINRLPS  +   +P E L   KP+Y  L+TFGC CWPNLRPYNK
Sbjct: 247  VPLKFWDEAFLAATYLINRLPSKVIQYSAPLERLLDQKPNYSALRTFGCACWPNLRPYNK 306

Query: 721  NKMHFQSLPCVFLGHSPSHHGHMCFHVPTARMYISRDVLFDEH 593
             K+ F+S  CVFLG+S  H G  C  V T R+YISRDV+FDE+
Sbjct: 307  RKLEFRSKQCVFLGYSNIHKGFKCLDVSTGRVYISRDVVFDEN 349



 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 32/89 (35%), Positives = 49/89 (55%)
 Frame = -3

Query: 268 TRSKTHTTCPKIQTDGTVSWPPPRAYITTSAVPEEPTSFSQVSKFSEWRLAMPHEFDALM 89
           TR +  T   K+ TDGTV +       +  A+  EP + ++    + W+ AM  EF AL+
Sbjct: 499 TRLQRGTRKEKVYTDGTVRY-------SFLAMTGEPNNLAEALADNNWKHAMDAEFTALL 551

Query: 88  STNTWSLVPPASHQNIVGYRWIFKTKHLS 2
              TW LVPP+S +NI+  +W++K K  S
Sbjct: 552 DNKTWHLVPPSSDKNIIDCKWVYKIKRKS 580


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  211 bits (538), Expect = 3e-52
 Identities = 89/163 (54%), Positives = 120/163 (73%)
 Frame = -3

Query: 1081 KICFIQSDWGGEFRSFNTILQSFGISHRLSCPYTHSQNGSVECKHRHVVETGLALLAHSS 902
            KI  +Q+DWGGE++  N+     GI H +SCP+TH QNGS E KHRH++E GL+LL+++S
Sbjct: 576  KIIAMQTDWGGEYQKLNSFFAKIGIDHHVSCPHTHQQNGSAERKHRHIIEVGLSLLSYAS 635

Query: 901  LPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHHKPDYLFLKTFGCQCWPNLRPYNK 722
            +P  +W +AF+ A +LINR+PS T+ N +P E LF+ KPDYL L+ FGC CWP+LRPYN 
Sbjct: 636  MPLKFWDEAFVAATYLINRVPSKTIQNSTPLEKLFNQKPDYLSLRVFGCACWPHLRPYNT 695

Query: 721  NKMHFQSLPCVFLGHSPSHHGHMCFHVPTARMYISRDVLFDEH 593
            +K+ F+S  CVFLG S  H G  C  V + R+YISRDV+FDE+
Sbjct: 696  HKLQFRSKQCVFLGFSTHHKGFKCLDVSSGRVYISRDVVFDEN 738


>gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1145

 Score =  210 bits (535), Expect = 7e-52
 Identities = 89/163 (54%), Positives = 116/163 (71%)
 Frame = -3

Query: 1081 KICFIQSDWGGEFRSFNTILQSFGISHRLSCPYTHSQNGSVECKHRHVVETGLALLAHSS 902
            KI  +Q+DWGGE+R+ N+     GI H +SCP+TH QNGS E KHRH+VE GL+LL+H+ 
Sbjct: 446  KILAMQTDWGGEYRALNSFFSKIGIVHHVSCPHTHQQNGSAERKHRHIVEVGLSLLSHAH 505

Query: 901  LPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHHKPDYLFLKTFGCQCWPNLRPYNK 722
            +P  +W +AF  A +LINR+PS  + N +P E  FH KPDY  L+ FGC CWPNLRPYNK
Sbjct: 506  MPLKFWDEAFQAATYLINRVPSRVIQNTTPLEKFFHQKPDYSSLRVFGCACWPNLRPYNK 565

Query: 721  NKMHFQSLPCVFLGHSPSHHGHMCFHVPTARMYISRDVLFDEH 593
            +K+ F+S  C FLG S  H G  C  + + R+YISRDV+FDE+
Sbjct: 566  HKLQFRSKRCAFLGFSNMHKGFKCLDISSGRVYISRDVVFDEN 608


>gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 900

 Score =  210 bits (534), Expect = 9e-52
 Identities = 93/163 (57%), Positives = 119/163 (73%)
 Frame = -3

Query: 1081 KICFIQSDWGGEFRSFNTILQSFGISHRLSCPYTHSQNGSVECKHRHVVETGLALLAHSS 902
            KI  +Q+DWGGE++  N+  Q  GISH +SCP+ H QNGS E KHRH+VE GL+LLAH+S
Sbjct: 9    KIKSVQTDWGGEYQRLNSFFQRIGISHHVSCPHAHQQNGSAERKHRHIVEVGLSLLAHAS 68

Query: 901  LPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHHKPDYLFLKTFGCQCWPNLRPYNK 722
            +P  +W +AFLTA +LINR P   +H  +P   LF  +PDY  L+TFGC CWPNLRPYN 
Sbjct: 69   MPLKFWDEAFLTATYLINRTPMKIIHYDTP-AYLFEEQPDYNALRTFGCACWPNLRPYNT 127

Query: 721  NKMHFQSLPCVFLGHSPSHHGHMCFHVPTARMYISRDVLFDEH 593
            +K+ F+S  CVFLG+SP H G  C  V + R+YISRDV+FDE+
Sbjct: 128  HKLAFRSKQCVFLGYSPLHKGFKCLEVNSGRVYISRDVVFDEN 170



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 32/86 (37%), Positives = 46/86 (53%)
 Frame = -3

Query: 268 TRSKTHTTCPKIQTDGTVSWPPPRAYITTSAVPEEPTSFSQVSKFSEWRLAMPHEFDALM 89
           TRS+     PK  TDGTV +      +T +    EP+S  +    + W+ AM  EF AL+
Sbjct: 356 TRSQHGVHRPKKYTDGTVRY----GCLTETG---EPSSLQEALSSANWKQAMDKEFSALL 408

Query: 88  STNTWSLVPPASHQNIVGYRWIFKTK 11
              TW LVPP   +NI+  +W++K K
Sbjct: 409 HNKTWHLVPPVKGKNIIDSKWVYKIK 434


>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1431

 Score =  210 bits (534), Expect = 9e-52
 Identities = 93/162 (57%), Positives = 115/162 (70%)
 Frame = -3

Query: 1081 KICFIQSDWGGEFRSFNTILQSFGISHRLSCPYTHSQNGSVECKHRHVVETGLALLAHSS 902
            KI  +Q+DWGGE+   +T     GISH +SCP+TH QNG+VE KHRH+VE GL+LLAH+S
Sbjct: 563  KILSMQTDWGGEYLKLHTFFNEIGISHHVSCPHTHQQNGAVERKHRHIVEVGLSLLAHAS 622

Query: 901  LPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHHKPDYLFLKTFGCQCWPNLRPYNK 722
            +P  +W +AFL A +LINRLPS  +   +P E LF   PDY  L+TFGC CWPNLRPYN 
Sbjct: 623  MPLKFWDEAFLAATYLINRLPSKVIKFDTPLERLFKQTPDYKSLRTFGCACWPNLRPYNT 682

Query: 721  NKMHFQSLPCVFLGHSPSHHGHMCFHVPTARMYISRDVLFDE 596
            +K+ F+S  CVFLG S  H G  C  V T R+Y+SRDV FDE
Sbjct: 683  HKLQFRSKQCVFLGFSNIHKGFKCLDVSTGRVYVSRDVTFDE 724


>gb|ABF99203.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1177

 Score =  209 bits (533), Expect = 1e-51
 Identities = 91/162 (56%), Positives = 118/162 (72%)
 Frame = -3

Query: 1081 KICFIQSDWGGEFRSFNTILQSFGISHRLSCPYTHSQNGSVECKHRHVVETGLALLAHSS 902
            KI  +Q+DWGGE++  N+  +  GI+H++SCP+TH QNG+VE KHRH+VE GL+LLAH+S
Sbjct: 453  KILGMQTDWGGEYQKLNSFFKQIGIAHQVSCPHTHQQNGAVERKHRHIVEIGLSLLAHAS 512

Query: 901  LPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHHKPDYLFLKTFGCQCWPNLRPYNK 722
            +P  +W +AFL A +LINRLP   +   +P   LFH +PDY  L+TFGC CWPNLRPYN 
Sbjct: 513  MPLKFWDEAFLAATYLINRLPRKVIDFDTPLARLFHQQPDYKSLRTFGCACWPNLRPYNT 572

Query: 721  NKMHFQSLPCVFLGHSPSHHGHMCFHVPTARMYISRDVLFDE 596
            +K+ F+S  CVFLG S  H G  C  V T ++YISRDV FDE
Sbjct: 573  HKLQFRSKQCVFLGFSNLHKGFKCLEVATGQVYISRDVTFDE 614


>gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
            sativa Japonica Group]
            gi|14718304|gb|AAK72882.1|AC091123_1 putative gag-pol
            protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  209 bits (533), Expect = 1e-51
 Identities = 91/162 (56%), Positives = 118/162 (72%)
 Frame = -3

Query: 1081 KICFIQSDWGGEFRSFNTILQSFGISHRLSCPYTHSQNGSVECKHRHVVETGLALLAHSS 902
            KI  +Q+DWGGE++  N+  +  GI+H++SCP+TH QNG+VE KHRH+VE GL+LLAH+S
Sbjct: 564  KILGMQTDWGGEYQKLNSFFKQIGIAHQVSCPHTHQQNGAVERKHRHIVEIGLSLLAHAS 623

Query: 901  LPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHHKPDYLFLKTFGCQCWPNLRPYNK 722
            +P  +W +AFL A +LINRLP   +   +P   LFH +PDY  L+TFGC CWPNLRPYN 
Sbjct: 624  MPLKFWDEAFLAATYLINRLPRKVIDFDTPLARLFHQQPDYKSLRTFGCACWPNLRPYNT 683

Query: 721  NKMHFQSLPCVFLGHSPSHHGHMCFHVPTARMYISRDVLFDE 596
            +K+ F+S  CVFLG S  H G  C  V T ++YISRDV FDE
Sbjct: 684  HKLQFRSKQCVFLGFSNLHKGFKCLEVATGQVYISRDVTFDE 725


>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1210

 Score =  208 bits (530), Expect = 3e-51
 Identities = 90/163 (55%), Positives = 114/163 (69%)
 Frame = -3

Query: 1081 KICFIQSDWGGEFRSFNTILQSFGISHRLSCPYTHSQNGSVECKHRHVVETGLALLAHSS 902
            KI  +Q+DWGGE+   +      GISH +SCP+TH QNGS E KHRH+VE GL+LLAH+S
Sbjct: 567  KIIAMQTDWGGEYEKLHDFFTKIGISHHVSCPHTHQQNGSAERKHRHIVEVGLSLLAHAS 626

Query: 901  LPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHHKPDYLFLKTFGCQCWPNLRPYNK 722
            +P  +W +AF+ A +LINR PS  +  ++P E LFH KP Y  L+ FGC CWPNLRPYN 
Sbjct: 627  MPLKFWDEAFIAATYLINRTPSKVIQYETPLEHLFHQKPSYTSLRVFGCACWPNLRPYNA 686

Query: 721  NKMHFQSLPCVFLGHSPSHHGHMCFHVPTARMYISRDVLFDEH 593
             K+ F+S  CVFLG+S  H G  C  V   R+YISRDV+FDE+
Sbjct: 687  RKLQFRSKQCVFLGYSNLHKGFKCLDVAAGRVYISRDVVFDEN 729


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  208 bits (529), Expect = 4e-51
 Identities = 93/163 (57%), Positives = 115/163 (70%)
 Frame = -3

Query: 1081 KICFIQSDWGGEFRSFNTILQSFGISHRLSCPYTHSQNGSVECKHRHVVETGLALLAHSS 902
            KI   QSDWGGE+   N   ++ GI H++SCP+TH QNG+ E KHRH+VE GLALLA SS
Sbjct: 576  KIIAFQSDWGGEYEKLNAHFKTIGIHHQVSCPHTHQQNGAAERKHRHIVEVGLALLAQSS 635

Query: 901  LPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHHKPDYLFLKTFGCQCWPNLRPYNK 722
            +P  YW  AFL AV+LINR PS T+ + +P   L    PDY  L+ FGC CWPNLRPYN+
Sbjct: 636  MPLKYWDHAFLAAVYLINRTPSKTIAHDTPLHKLTGATPDYSSLRIFGCACWPNLRPYNQ 695

Query: 721  NKMHFQSLPCVFLGHSPSHHGHMCFHVPTARMYISRDVLFDEH 593
            +K+ F+S  CVFLG+S  H G  C  + T R+YISRDV+FDEH
Sbjct: 696  HKLQFRSTRCVFLGYSNMHKGFKCLDISTGRIYISRDVVFDEH 738



 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 36/87 (41%), Positives = 49/87 (56%)
 Frame = -3

Query: 268  TRSKTHTTCPKIQTDGTVSWPPPRAYITTSAVPEEPTSFSQVSKFSEWRLAMPHEFDALM 89
            TR +   + PK  TDGTV +    A IT      EP+S S+     +WR AM  EF AL 
Sbjct: 896  TRLQHGISKPKQFTDGTVRYGNAAARIT------EPSSVSEALADPQWRAAMEAEFQALQ 949

Query: 88   STNTWSLVPPASHQNIVGYRWIFKTKH 8
              NTW+LVPP   +N++  +W+FK K+
Sbjct: 950  KNNTWTLVPPDRTRNLIDCKWVFKVKY 976


>gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [Oryza sativa
            Japonica Group] gi|31431217|gb|AAP53032.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1042

 Score =  208 bits (529), Expect = 4e-51
 Identities = 90/163 (55%), Positives = 119/163 (73%)
 Frame = -3

Query: 1081 KICFIQSDWGGEFRSFNTILQSFGISHRLSCPYTHSQNGSVECKHRHVVETGLALLAHSS 902
            KI  +Q+DWGGE++  N+  +  GISH +SCP+TH QNGS E KHR +VE GLALLA++S
Sbjct: 469  KIIAMQTDWGGEYQKLNSFFEKIGISHHVSCPHTHQQNGSAERKHRLIVEVGLALLAYAS 528

Query: 901  LPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHHKPDYLFLKTFGCQCWPNLRPYNK 722
            +P  YW +AFL A  +INR+PS  L   +P E LF+HK DY   + FGC CWPNLRPYN 
Sbjct: 529  MPLKYWDEAFLAATHIINRIPSRILQYDTPLECLFNHKLDYSSFRIFGCACWPNLRPYNA 588

Query: 721  NKMHFQSLPCVFLGHSPSHHGHMCFHVPTARMYISRDVLFDEH 593
            +K+ F+S+ CVFLG S +H+G+ C  + T R+YI RDV+FDE+
Sbjct: 589  HKLQFRSMQCVFLGPSHTHNGYKCLDIATGRIYICRDVVFDEN 631


>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
          Length = 1365

 Score =  206 bits (524), Expect = 1e-50
 Identities = 98/162 (60%), Positives = 117/162 (72%)
 Frame = -3

Query: 1081 KICFIQSDWGGEFRSFNTILQSFGISHRLSCPYTHSQNGSVECKHRHVVETGLALLAHSS 902
            KI  +QSD GGEFRSF + LQ  GI HR SCPY  SQNG VE KHRHVVETGLALLAH+ 
Sbjct: 553  KIKCLQSDNGGEFRSFMSFLQESGILHRFSCPYNSSQNGRVERKHRHVVETGLALLAHAG 612

Query: 901  LPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHHKPDYLFLKTFGCQCWPNLRPYNK 722
            LP  +WS AF TA FLINR+PS  L N SP+  LF   PDY FL+ FGC C+P +RPYN 
Sbjct: 613  LPLKFWSYAFQTATFLINRMPSKVLQNASPYFALFKRNPDYKFLRVFGCLCYPFIRPYNN 672

Query: 721  NKMHFQSLPCVFLGHSPSHHGHMCFHVPTARMYISRDVLFDE 596
            +K+ ++SL CVFLG+S  H G++C    T R+Y+S  V+FDE
Sbjct: 673  HKLQYRSLKCVFLGYSLHHKGYLCLDNLTGRVYVSPHVVFDE 714