BLASTX nr result

ID: Akebia22_contig00034159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00034159
         (222 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containi...    64   3e-08
ref|XP_006475767.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_006475766.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_006451033.1| hypothetical protein CICLE_v10010814mg, part...    57   3e-06

>ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Vitis vinifera]
          Length = 858

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 30/66 (45%), Positives = 44/66 (66%)
 Frame = +3

Query: 24  MASLPLYTTPNSNFPHFKSTKTREILNFKATHLTKHRENEKESQISYKTYLHHISSLCKE 203
           MASLP+ TTPN +  HFK  K+ +   F +T L K +E ++  +  YK+Y HHISSLCK+
Sbjct: 1   MASLPITTTPNPHTSHFKPRKSSK---FASTRLAKLQEKDENRRSLYKSYFHHISSLCKD 57

Query: 204 SRIEEA 221
             ++E+
Sbjct: 58  GHLQES 63


>ref|XP_006475767.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 622

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/66 (46%), Positives = 38/66 (57%)
 Frame = +3

Query: 24  MASLPLYTTPNSNFPHFKSTKTREILNFKATHLTKHRENEKESQISYKTYLHHISSLCKE 203
           MAS    T PN  F H   TK ++ L    THLTK RE++   +  YK+Y H ISSL KE
Sbjct: 1   MASFTFTTPPNPKFSH---TKPQKPLKLSQTHLTKLRESDNSYESLYKSYFHQISSLSKE 57

Query: 204 SRIEEA 221
            +I EA
Sbjct: 58  KQIREA 63


>ref|XP_006475766.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like isoform X1 [Citrus sinensis]
          Length = 840

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/66 (46%), Positives = 38/66 (57%)
 Frame = +3

Query: 24  MASLPLYTTPNSNFPHFKSTKTREILNFKATHLTKHRENEKESQISYKTYLHHISSLCKE 203
           MAS    T PN  F H   TK ++ L    THLTK RE++   +  YK+Y H ISSL KE
Sbjct: 1   MASFTFTTPPNPKFSH---TKPQKPLKLSQTHLTKLRESDNSYESLYKSYFHQISSLSKE 57

Query: 204 SRIEEA 221
            +I EA
Sbjct: 58  KQIREA 63


>ref|XP_006451033.1| hypothetical protein CICLE_v10010814mg, partial [Citrus clementina]
           gi|557554259|gb|ESR64273.1| hypothetical protein
           CICLE_v10010814mg, partial [Citrus clementina]
          Length = 830

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/66 (46%), Positives = 38/66 (57%)
 Frame = +3

Query: 24  MASLPLYTTPNSNFPHFKSTKTREILNFKATHLTKHRENEKESQISYKTYLHHISSLCKE 203
           MAS    T PN  F H   TK ++ L    THLTK RE++   +  YK+Y H ISSL KE
Sbjct: 1   MASFTFTTPPNPKFSH---TKPQKPLKLSQTHLTKLRESDNSYESLYKSYFHQISSLSKE 57

Query: 204 SRIEEA 221
            +I EA
Sbjct: 58  KQIREA 63


Top