BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00034048
         (652 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat...   292   5e-77
emb|CAN63846.1| hypothetical protein VITISV_010038 [Vitis vinifera]   292   5e-77
gb|EXB92364.1| hypothetical protein L484_021348 [Morus notabilis]     291   9e-77
ref|XP_006450548.1| hypothetical protein CICLE_v10008244mg [Citr...   291   1e-76
ref|XP_007211611.1| hypothetical protein PRUPE_ppa005509mg [Prun...   287   2e-75
ref|XP_004151692.1| PREDICTED: putative pentatricopeptide repeat...   286   3e-75
ref|XP_004305450.1| PREDICTED: putative pentatricopeptide repeat...   283   4e-74
ref|XP_007048731.1| Pentatricopeptide repeat superfamily protein...   280   4e-73
ref|XP_007048729.1| Pentatricopeptide repeat superfamily protein...   280   4e-73
ref|XP_007048728.1| Pentatricopeptide repeat superfamily protein...   280   4e-73
ref|XP_007215356.1| hypothetical protein PRUPE_ppa005519mg [Prun...   278   1e-72
ref|XP_006357835.1| PREDICTED: putative pentatricopeptide repeat...   275   9e-72
ref|XP_004232338.1| PREDICTED: putative pentatricopeptide repeat...   274   2e-71
ref|XP_004499962.1| PREDICTED: putative pentatricopeptide repeat...   271   1e-70
ref|XP_002532784.1| pentatricopeptide repeat-containing protein,...   270   3e-70
ref|XP_004243786.1| PREDICTED: putative pentatricopeptide repeat...   270   4e-70
ref|XP_006348886.1| PREDICTED: putative pentatricopeptide repeat...   266   4e-69
ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat...   259   5e-67
ref|XP_007137425.1| hypothetical protein PHAVU_009G126100g [Phas...   258   1e-66
ref|XP_006833205.1| hypothetical protein AMTR_s00072p00167120 [A...   257   2e-66

>ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Vitis vinifera]
          Length = 457

 Score =  292 bits (748), Expect = 5e-77
 Identities = 138/215 (64%), Positives = 175/215 (81%)
 Frame = +3

Query: 6   KLSTLSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYS 185
           + ST  LNIC++  CK  Q++KAEA +I+ IRLG LP+VVTYNTL+  YSR VG DAAYS
Sbjct: 4   RFSTKLLNICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYS 63

Query: 186 ILHRIREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFF 365
           ++HR++EAG++P+V+TYNSL++ A +  LLS++LDLF+EML+ GI PDVW+YN+LMHCFF
Sbjct: 64  VIHRMKEAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHCFF 123

Query: 366 KSGRPDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLV 545
           K G+PDEANR+F DI+L NL P  +TFN MINGL   G TG A+ L+R LQR GF P+LV
Sbjct: 124 KLGKPDEANRVFQDIILTNLLPSSSTFNIMINGLCNNGYTGYALSLYRYLQRQGFVPELV 183

Query: 546 TYNILINGLCKAGRLGEARRILNELGESGHVPNAI 650
           TYNILINGLCK+ +L  ARRIL ELGESG+VP+AI
Sbjct: 184 TYNILINGLCKSRKLNAARRILRELGESGNVPDAI 218



 Score =  100 bits (250), Expect = 3e-19
 Identities = 60/207 (28%), Positives = 103/207 (49%)
 Frame = +3

Query: 12  STLSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSIL 191
           S+ + NI ++  C +     A +      R G++P +VTYN LI    +    +AA  IL
Sbjct: 146 SSSTFNIMINGLCNNGYTGYALSLYRYLQRQGFVPELVTYNILINGLCKSRKLNAARRIL 205

Query: 192 HRIREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKS 371
             + E+G  P+ +TY ++M C  R     +  ++F EM   G   D ++Y  ++    K+
Sbjct: 206 RELGESGNVPDAITYTTVMKCCFRSRQFEQGFEIFSEMKSKGYAFDAFSYCAVIAALTKT 265

Query: 372 GRPDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTY 551
           GR +EAN I   +  +++     ++NT++N   + G      +L   ++ HG      T+
Sbjct: 266 GRLEEANDIMEQMARSDIDLDIVSYNTVMNLYCRNGKLEATYKLLDEIEEHGLECDEYTH 325

Query: 552 NILINGLCKAGRLGEARRILNELGESG 632
            ILI+GLCKAG +  A R L  + + G
Sbjct: 326 TILIDGLCKAGNVEGALRHLKNMTKMG 352



 Score =  100 bits (248), Expect = 5e-19
 Identities = 52/194 (26%), Positives = 105/194 (54%)
 Frame = +3

Query: 18  LSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHR 197
           ++ NI ++  CKS++++ A   +      G +P+ +TY T++    R   F+  + I   
Sbjct: 183 VTYNILINGLCKSRKLNAARRILRELGESGNVPDAITYTTVMKCCFRSRQFEQGFEIFSE 242

Query: 198 IREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGR 377
           ++  G   +  +Y ++++   +   L +  D+ ++M +  I+ D+ +YNT+M+ + ++G+
Sbjct: 243 MKSKGYAFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDIVSYNTVMNLYCRNGK 302

Query: 378 PDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNI 557
            +   ++  +I  + L   E T   +I+GL KAG    A+R  +N+ + GF   LV  N 
Sbjct: 303 LEATYKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRHLKNMTKMGFDSTLVAQNC 362

Query: 558 LINGLCKAGRLGEA 599
           +I+GLCK G+L  A
Sbjct: 363 VIDGLCKVGQLDHA 376



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 46/195 (23%), Positives = 90/195 (46%)
 Frame = +3

Query: 36  VSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHRIREAGL 215
           ++   K+ ++++A   +    R     ++V+YNT++  Y R    +A Y +L  I E GL
Sbjct: 259 IAALTKTGRLEEANDIMEQMARSDIDLDIVSYNTVMNLYCRNGKLEATYKLLDEIEEHGL 318

Query: 216 TPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGRPDEANR 395
             +  T+  L+    +   +   L     M + G +  +   N ++    K G+ D A +
Sbjct: 319 ECDEYTHTILIDGLCKAGNVEGALRHLKNMTKMGFDSTLVAQNCVIDGLCKVGQLDHAIK 378

Query: 396 IFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNILINGLC 575
           +F  + + +      T+++M++ L KA    +A RL     R G          +I+GLC
Sbjct: 379 MFASMEVKD----SFTYSSMVHNLCKARRYRHASRLLLACLRGGMKILRANQRSVIDGLC 434

Query: 576 KAGRLGEARRILNEL 620
            +G   EARR+ +++
Sbjct: 435 YSGYTSEARRLKSKI 449


>emb|CAN63846.1| hypothetical protein VITISV_010038 [Vitis vinifera]
          Length = 457

 Score =  292 bits (748), Expect = 5e-77
 Identities = 138/215 (64%), Positives = 175/215 (81%)
 Frame = +3

Query: 6   KLSTLSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYS 185
           + ST  LNIC++  CK  Q++KAEA +I+ IRLG LP+VVTYNTL+  YSR VG DAAYS
Sbjct: 4   RFSTKLLNICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYS 63

Query: 186 ILHRIREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFF 365
           ++HR++EAG++P+V+TYNSL++ A +  LLS++LDLF+EML+ GI PDVW+YN+LMHCFF
Sbjct: 64  VIHRMKEAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHCFF 123

Query: 366 KSGRPDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLV 545
           K G+PDEANR+F DI+L NL P  +TFN MINGL   G TG A+ L+R LQR GF P+LV
Sbjct: 124 KLGKPDEANRVFQDIILTNLLPSSSTFNIMINGLCNNGYTGYALSLYRYLQRQGFVPELV 183

Query: 546 TYNILINGLCKAGRLGEARRILNELGESGHVPNAI 650
           TYNILINGLCK+ +L  ARRIL ELGESG+VP+AI
Sbjct: 184 TYNILINGLCKSRKLNAARRILRELGESGNVPDAI 218



 Score =  100 bits (250), Expect = 3e-19
 Identities = 60/207 (28%), Positives = 103/207 (49%)
 Frame = +3

Query: 12  STLSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSIL 191
           S+ + NI ++  C +     A +      R G++P +VTYN LI    +    +AA  IL
Sbjct: 146 SSSTFNIMINGLCNNGYTGYALSLYRYLQRQGFVPELVTYNILINGLCKSRKLNAARRIL 205

Query: 192 HRIREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKS 371
             + E+G  P+ +TY ++M C  R     +  ++F EM   G   D ++Y  ++    K+
Sbjct: 206 RELGESGNVPDAITYTTVMKCCFRSRQFEQGFEIFSEMKSKGYAFDAFSYCAVIAALTKT 265

Query: 372 GRPDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTY 551
           GR +EAN I   +  +++     ++NT++N   + G      +L   ++ HG      T+
Sbjct: 266 GRLEEANDIMEQMARSDIDLDIVSYNTVMNLYCRNGKLEATYKLLDEIEEHGLECDEYTH 325

Query: 552 NILINGLCKAGRLGEARRILNELGESG 632
            ILI+GLCKAG +  A R L  + + G
Sbjct: 326 TILIDGLCKAGNVEGALRHLKNMTKMG 352



 Score =  100 bits (248), Expect = 5e-19
 Identities = 52/194 (26%), Positives = 105/194 (54%)
 Frame = +3

Query: 18  LSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHR 197
           ++ NI ++  CKS++++ A   +      G +P+ +TY T++    R   F+  + I   
Sbjct: 183 VTYNILINGLCKSRKLNAARRILRELGESGNVPDAITYTTVMKCCFRSRQFEQGFEIFSE 242

Query: 198 IREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGR 377
           ++  G   +  +Y ++++   +   L +  D+ ++M +  I+ D+ +YNT+M+ + ++G+
Sbjct: 243 MKSKGYAFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDIVSYNTVMNLYCRNGK 302

Query: 378 PDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNI 557
            +   ++  +I  + L   E T   +I+GL KAG    A+R  +N+ + GF   LV  N 
Sbjct: 303 LEATYKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRHLKNMTKMGFDSTLVAQNC 362

Query: 558 LINGLCKAGRLGEA 599
           +I+GLCK G+L  A
Sbjct: 363 VIDGLCKVGQLDHA 376


>gb|EXB92364.1| hypothetical protein L484_021348 [Morus notabilis]
          Length = 453

 Score =  291 bits (746), Expect = 9e-77
 Identities = 143/214 (66%), Positives = 169/214 (78%)
 Frame = +3

Query: 9   LSTLSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSI 188
           LST  LNIC++ FCKS+ + KAEA I++ IRL  LP+VVTYN L+  Y R+VG DAAYSI
Sbjct: 2   LSTRLLNICITSFCKSRDLAKAEAVIVDGIRLDILPDVVTYNALVDAYCRIVGLDAAYSI 61

Query: 189 LHRIREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFK 368
           L R+REAG+TP+VVTYNSL++ A R  LLS+ LD FDEML+ GI PDVW+YNTLMHCFFK
Sbjct: 62  LQRMREAGITPDVVTYNSLIAGAARRCLLSRVLDFFDEMLRAGIRPDVWSYNTLMHCFFK 121

Query: 369 SGRPDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVT 548
            G+PDEAN IF DI+L++  PC TTFN M+NGL K G   NA+ LFRNL+ HGF PQLVT
Sbjct: 122 VGKPDEANAIFRDIILSDFLPCATTFNIMLNGLCKNGYINNALMLFRNLEHHGFVPQLVT 181

Query: 549 YNILINGLCKAGRLGEARRILNELGESGHVPNAI 650
            NILINGLCKA RL  AR+IL ELGESG  PN+I
Sbjct: 182 CNILINGLCKARRLRAARKILRELGESGIEPNSI 215



 Score =  107 bits (266), Expect = 4e-21
 Identities = 63/210 (30%), Positives = 104/210 (49%)
 Frame = +3

Query: 21  SLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHRI 200
           + NI ++  CK+  I+ A     N    G++P +VT N LI    +     AA  IL  +
Sbjct: 146 TFNIMLNGLCKNGYINNALMLFRNLEHHGFVPQLVTCNILINGLCKARRLRAARKILREL 205

Query: 201 REAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGRP 380
            E+G+ PN +TY ++M C +      + L++   M   G   D ++Y T++    K+GR 
Sbjct: 206 GESGIEPNSITYTTVMKCCLMSKQYQQGLEIMSLMKNKGYAFDGFSYCTIISALVKTGRM 265

Query: 381 DEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNIL 560
           +EAN    +++ N +     ++NT+IN   K G    A +L   +++ G      T+ I+
Sbjct: 266 EEANSYIEEMMTNGIELDLVSYNTLINWYCKEGDLETAYKLLHEIEKGGLECDKYTHTII 325

Query: 561 INGLCKAGRLGEARRILNELGESGHVPNAI 650
           INGLCKAG +  A R L  +   G   N +
Sbjct: 326 INGLCKAGNIECALRHLEYMCTMGFDSNVV 355


>ref|XP_006450548.1| hypothetical protein CICLE_v10008244mg [Citrus clementina]
           gi|568844658|ref|XP_006476201.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like isoform X1 [Citrus sinensis]
           gi|568844660|ref|XP_006476202.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like isoform X2 [Citrus sinensis]
           gi|568844662|ref|XP_006476203.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like isoform X3 [Citrus sinensis]
           gi|557553774|gb|ESR63788.1| hypothetical protein
           CICLE_v10008244mg [Citrus clementina]
          Length = 456

 Score =  291 bits (745), Expect = 1e-76
 Identities = 141/215 (65%), Positives = 172/215 (80%)
 Frame = +3

Query: 6   KLSTLSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYS 185
           KLST  LNICV  FCK+ +++KAEA II+ IRLG LP+VVTYN LI  Y + V FDA Y+
Sbjct: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63

Query: 186 ILHRIREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFF 365
           IL+R+REAG++P+VVTYNSL++ A R SLLS +LDL DEML+ GI PDVW+YN+LMHC F
Sbjct: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123

Query: 366 KSGRPDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLV 545
           + G+PDEANR+F D++  +LTPC  TFN M+NGL K   T NA+R+FR LQ+HGF P+LV
Sbjct: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183

Query: 546 TYNILINGLCKAGRLGEARRILNELGESGHVPNAI 650
           TYNILI GLCKAGRL  AR IL ELG+SGH PNAI
Sbjct: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218



 Score =  100 bits (250), Expect = 3e-19
 Identities = 64/210 (30%), Positives = 100/210 (47%)
 Frame = +3

Query: 15  TLSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILH 194
           T + NI ++  CK++  D A        + G++P +VTYN LI    +      A  IL 
Sbjct: 147 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 206

Query: 195 RIREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSG 374
            + ++G  PN +TY ++M C  R       L++   M + G   D + Y T++  F K G
Sbjct: 207 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 266

Query: 375 RPDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYN 554
           R  EA      +V + +     ++NT+IN   K G    A  L   +++ GF     T+ 
Sbjct: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326

Query: 555 ILINGLCKAGRLGEARRILNELGESGHVPN 644
           ILI+GLCKAG +  AR  L  + + G   N
Sbjct: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356



 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 47/201 (23%), Positives = 95/201 (47%)
 Frame = +3

Query: 18  LSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHR 197
           ++ NI +   CK+ ++  A   +      G+ PN +TY T++    R   +     IL  
Sbjct: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242

Query: 198 IREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGR 377
           ++  G T +   Y ++++  V+   L +  D  ++M+  G++ D+ +YNTL++ + K G+
Sbjct: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302

Query: 378 PDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNI 557
            + A  +  ++        + T   +I+GL KAG    A      + + GF   L  YN 
Sbjct: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362

Query: 558 LINGLCKAGRLGEARRILNEL 620
           +++ L K G++  A  +   +
Sbjct: 363 IVDRLGKDGKIDHAINVFESM 383


>ref|XP_007211611.1| hypothetical protein PRUPE_ppa005509mg [Prunus persica]
           gi|462407476|gb|EMJ12810.1| hypothetical protein
           PRUPE_ppa005509mg [Prunus persica]
          Length = 457

 Score =  287 bits (734), Expect = 2e-75
 Identities = 137/214 (64%), Positives = 171/214 (79%)
 Frame = +3

Query: 9   LSTLSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSI 188
           LST  LNIC++ FCK + ++KAEA +I+ IRLG +P+VVTYNTL+  YSR V  DAAYS+
Sbjct: 6   LSTKLLNICIASFCKVRLLEKAEAIVIDGIRLGLIPDVVTYNTLVSAYSRFVSLDAAYSV 65

Query: 189 LHRIREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFK 368
           +HR++EAG++PNV+TYNSLMS A +  LLS++LDLF+EML  G+ P++W+YN LMHCFFK
Sbjct: 66  IHRMKEAGISPNVITYNSLMSGATQNCLLSRSLDLFEEMLLAGVHPNLWSYNILMHCFFK 125

Query: 369 SGRPDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVT 548
            G+PDEAN++F DI+L+NLTP   T N MINGL   G   NA+ L+RNLQRHGF PQLVT
Sbjct: 126 LGKPDEANKVFQDILLSNLTPHPATLNIMINGLCNNGYIDNALMLYRNLQRHGFVPQLVT 185

Query: 549 YNILINGLCKAGRLGEARRILNELGESGHVPNAI 650
           YNILIN LCK  RL +ARRIL ELGESGH P+ I
Sbjct: 186 YNILINWLCKTRRLRQARRILKELGESGHEPSLI 219



 Score =  100 bits (250), Expect = 3e-19
 Identities = 61/210 (29%), Positives = 103/210 (49%)
 Frame = +3

Query: 21  SLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHRI 200
           +LNI ++  C +  ID A     N  R G++P +VTYN LI    +      A  IL  +
Sbjct: 150 TLNIMINGLCNNGYIDNALMLYRNLQRHGFVPQLVTYNILINWLCKTRRLRQARRILKEL 209

Query: 201 REAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGRP 380
            E+G  P+++TY ++M C  R +   K L++   M+  G   D +   T++    K+GR 
Sbjct: 210 GESGHEPSLITYTTVMKCCFRSNKYDKGLEIMSVMMGKGYTFDGYACCTVVAALVKTGRI 269

Query: 381 DEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNIL 560
           +EAN      + N +      +NT++N   + G    A +L   ++  G      T+ I+
Sbjct: 270 EEANACMEQTIRNGVELDLVAYNTLLNMYCREGKFEAAYKLLDEMENGGLLCDKYTHTII 329

Query: 561 INGLCKAGRLGEARRILNELGESGHVPNAI 650
           I+GLCKAG +  A++ L+ +   G   N +
Sbjct: 330 IDGLCKAGNISGAQKHLHYMKMMGFHENLV 359



 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 49/191 (25%), Positives = 87/191 (45%)
 Frame = +3

Query: 36  VSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHRIREAGL 215
           V+   K+ +I++A A +   IR G   ++V YNTL+  Y R   F+AAY +L  +   GL
Sbjct: 260 VAALVKTGRIEEANACMEQTIRNGVELDLVAYNTLLNMYCREGKFEAAYKLLDEMENGGL 319

Query: 216 TPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGRPDEANR 395
             +  T+  ++    +   +S        M   G   ++   N ++    K+G+ D A  
Sbjct: 320 LCDKYTHTIIIDGLCKAGNISGAQKHLHYMKMMGFHENLVALNCMIDGLCKAGQIDRAME 379

Query: 396 IFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNILINGLC 575
           ++  +     T    T+ ++++ L KAG    A +L     RHG      T   + +GL 
Sbjct: 380 LYKSME----TKDSFTYTSLVHNLCKAGRFRLASKLMMKCLRHGKKIPKATQRAVFDGLY 435

Query: 576 KAGRLGEARRI 608
            +G   EAR++
Sbjct: 436 SSGFTNEARKL 446


>ref|XP_004151692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
           gi|449468117|ref|XP_004151768.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
           gi|449532400|ref|XP_004173169.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
          Length = 456

 Score =  286 bits (733), Expect = 3e-75
 Identities = 143/215 (66%), Positives = 170/215 (79%)
 Frame = +3

Query: 6   KLSTLSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYS 185
           K ST  LNICV+ FCKSQQ+ KAEA II+ IR+G LP+VVTYNTLI  Y R  G DAAYS
Sbjct: 4   KYSTKFLNICVASFCKSQQMQKAEAVIIDGIRIGVLPDVVTYNTLIDGYCRFSGMDAAYS 63

Query: 186 ILHRIREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFF 365
           +L+R+REAG++P+V+TYNSL++ A R   L ++LDLF+EMLQ GI PD+W+YNTLMHCFF
Sbjct: 64  VLYRMREAGISPDVITYNSLIAGATRNFSLEQSLDLFEEMLQSGITPDIWSYNTLMHCFF 123

Query: 366 KSGRPDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLV 545
             G+PDEA R+F DI+L +L+P   TFNTMINGL K G T NAI LFRNLQRHGF PQLV
Sbjct: 124 ILGKPDEAYRVFKDIILKDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLQRHGFIPQLV 183

Query: 546 TYNILINGLCKAGRLGEARRILNELGESGHVPNAI 650
           TYNILINGLCK  RL  A R+LNE  +SG  PNA+
Sbjct: 184 TYNILINGLCKVDRLRAAIRMLNEAMDSGLEPNAV 218



 Score =  104 bits (259), Expect = 3e-20
 Identities = 64/211 (30%), Positives = 102/211 (48%)
 Frame = +3

Query: 18  LSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHR 197
           ++ N  ++  CK      A     N  R G++P +VTYN LI    +V    AA  +L+ 
Sbjct: 148 VTFNTMINGLCKHGYTSNAIMLFRNLQRHGFIPQLVTYNILINGLCKVDRLRAAIRMLNE 207

Query: 198 IREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGR 377
             ++GL PN VTY +LM    R     +  ++F +M   G   D + Y T+   F K GR
Sbjct: 208 AMDSGLEPNAVTYTTLMKSCFRSRQYERGFEIFSKMKNKGYAFDGFAYCTVSGAFLKLGR 267

Query: 378 PDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNI 557
            +EA      ++ N++    T +NT IN   K G    A +LF  ++  G    + T++I
Sbjct: 268 FEEAKFCMEQMIKNDVGIDITFYNTFINLYCKEGKLEAAYKLFDEIEPRGLECDVYTHSI 327

Query: 558 LINGLCKAGRLGEARRILNELGESGHVPNAI 650
           + NGLC+ G +  A + LN +  +G   N +
Sbjct: 328 ITNGLCRVGNIEGAMQHLNCVYTTGFASNLV 358



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 55/241 (22%), Positives = 98/241 (40%), Gaps = 36/241 (14%)
 Frame = +3

Query: 18  LSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHR 197
           ++ NI ++  CK  ++  A   +  A+  G  PN VTY TL+ +  R   ++  + I  +
Sbjct: 183 VTYNILINGLCKVDRLRAAIRMLNEAMDSGLEPNAVTYTTLMKSCFRSRQYERGFEIFSK 242

Query: 198 IREAGLT-----------------------------------PNVVTYNSLMSCAVRYSL 272
           ++  G                                      ++  YN+ ++   +   
Sbjct: 243 MKNKGYAFDGFAYCTVSGAFLKLGRFEEAKFCMEQMIKNDVGIDITFYNTFINLYCKEGK 302

Query: 273 LSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGRPDEANRIFHDIVLNNLTPCETTFNT 452
           L     LFDE+   G+E DV+T++ + +   + G  + A +  + +            N 
Sbjct: 303 LEAAYKLFDEIEPRGLECDVYTHSIITNGLCRVGNIEGAMQHLNCVYTTGFASNLVALNC 362

Query: 453 MINGLFKAGCTGNAIRLFRNLQ-RHGFSPQLVTYNILINGLCKAGRLGEARRILNELGES 629
           +I+ L KAG    AIRLF +++ R  F     TY  L++ LCKA R   A ++L      
Sbjct: 363 LIDRLCKAGQIDRAIRLFESMETRDSF-----TYTSLVHNLCKARRFRCASKLLISCSRD 417

Query: 630 G 632
           G
Sbjct: 418 G 418


>ref|XP_004305450.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Fragaria vesca subsp. vesca]
          Length = 456

 Score =  283 bits (723), Expect = 4e-74
 Identities = 137/214 (64%), Positives = 173/214 (80%)
 Frame = +3

Query: 9   LSTLSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSI 188
           LST  LNIC+S FCK++ + +AEA II+ IRLG +PN  TYNTL+  Y + V  DAAYS+
Sbjct: 5   LSTRLLNICISSFCKARLLGRAEAVIIDGIRLGVVPNRHTYNTLLHAYCQFVDIDAAYSV 64

Query: 189 LHRIREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFK 368
           +HR++EAG++P+V T+NSL+S A R  LLS+ LDLFDEMLQ GI PDVW+YN LMHCFFK
Sbjct: 65  VHRMKEAGISPDVCTFNSLISGATRNRLLSRCLDLFDEMLQEGIHPDVWSYNILMHCFFK 124

Query: 369 SGRPDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVT 548
            G+PDEANR+F DI+L++LTP   T+N MINGL K G T +A+ LFRNLQRHGF+P LVT
Sbjct: 125 LGKPDEANRVFQDILLSDLTPHAATYNIMINGLCKNGYTDHALMLFRNLQRHGFAPTLVT 184

Query: 549 YNILINGLCKAGRLGEARRILNELGESGHVPNAI 650
           YNI+I+GLCKA R+ +AR+IL +L ESGHVP+AI
Sbjct: 185 YNIIISGLCKARRVRQARKILQDLVESGHVPDAI 218



 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 58/208 (27%), Positives = 98/208 (47%)
 Frame = +3

Query: 27  NICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHRIRE 206
           NI ++  CK+   D A     N  R G+ P +VTYN +I    +      A  IL  + E
Sbjct: 151 NIMINGLCKNGYTDHALMLFRNLQRHGFAPTLVTYNIIISGLCKARRVRQARKILQDLVE 210

Query: 207 AGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGRPDE 386
           +G  P+ +TY +++    R       L++  EM   G   D + Y T++    K+GR + 
Sbjct: 211 SGHVPDAITYTTVLKSCFRSKQYDHGLEIMSEMKSKGYTFDGFAYCTVIAALLKTGRMEG 270

Query: 387 ANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNILIN 566
           AN     ++ + +     ++N ++N L K G    A +L   ++  G S    T+ I+I+
Sbjct: 271 ANLFMEQLMDSGIEMDLVSYNNLLNTLCKDGKFEAAYKLMDEIENRGLSCDKYTHTIMID 330

Query: 567 GLCKAGRLGEARRILNELGESGHVPNAI 650
           GLCKAG +  A + L+ +   G   N +
Sbjct: 331 GLCKAGNIAGALKHLHYMNMMGFHDNVV 358



 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 51/199 (25%), Positives = 104/199 (52%)
 Frame = +3

Query: 18  LSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHR 197
           ++ NI +S  CK++++ +A   + + +  G++P+ +TY T++ +  R   +D    I+  
Sbjct: 183 VTYNIIISGLCKARRVRQARKILQDLVESGHVPDAITYTTVLKSCFRSKQYDHGLEIMSE 242

Query: 198 IREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGR 377
           ++  G T +   Y ++++  ++   +       ++++  GIE D+ +YN L++   K G+
Sbjct: 243 MKSKGYTFDGFAYCTVIAALLKTGRMEGANLFMEQLMDSGIEMDLVSYNNLLNTLCKDGK 302

Query: 378 PDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNI 557
            + A ++  +I    L+  + T   MI+GL KAG    A++    +   GF   +V  N 
Sbjct: 303 FEAAYKLMDEIENRGLSCDKYTHTIMIDGLCKAGNIAGALKHLHYMNMMGFHDNVVALNC 362

Query: 558 LINGLCKAGRLGEARRILN 614
           LI+GL KAG +  A  + N
Sbjct: 363 LIDGLGKAGEIDRAMELYN 381



 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 53/204 (25%), Positives = 91/204 (44%)
 Frame = +3

Query: 21  SLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHRI 200
           S NI +  F K  + D+A     + +     P+  TYN +I    +    D A  +   +
Sbjct: 114 SYNILMHCFFKLGKPDEANRVFQDILLSDLTPHAATYNIMINGLCKNGYTDHALMLFRNL 173

Query: 201 REAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGRP 380
           +  G  P +VTYN ++S   +   + +   +  ++++ G  PD  TY T++   F+S + 
Sbjct: 174 QRHGFAPTLVTYNIIISGLCKARRVRQARKILQDLVESGHVPDAITYTTVLKSCFRSKQY 233

Query: 381 DEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNIL 560
           D    I  ++     T     + T+I  L K G    A      L   G    LV+YN L
Sbjct: 234 DHGLEIMSEMKSKGYTFDGFAYCTVIAALLKTGRMEGANLFMEQLMDSGIEMDLVSYNNL 293

Query: 561 INGLCKAGRLGEARRILNELGESG 632
           +N LCK G+   A ++++E+   G
Sbjct: 294 LNTLCKDGKFEAAYKLMDEIENRG 317



 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 44/176 (25%), Positives = 84/176 (47%)
 Frame = +3

Query: 105 GYLPNVVTYNTLIPTYSRVVGFDAAYSILHRIREAGLTPNVVTYNSLMSCAVRYSLLSKT 284
           G  P+V +YN L+  + ++   D A  +   I  + LTP+  TYN +++   +       
Sbjct: 107 GIHPDVWSYNILMHCFFKLGKPDEANRVFQDILLSDLTPHAATYNIMINGLCKNGYTDHA 166

Query: 285 LDLFDEMLQWGIEPDVWTYNTLMHCFFKSGRPDEANRIFHDIVLNNLTPCETTFNTMING 464
           L LF  + + G  P + TYN ++    K+ R  +A +I  D+V +   P   T+ T++  
Sbjct: 167 LMLFRNLQRHGFAPTLVTYNIIISGLCKARRVRQARKILQDLVESGHVPDAITYTTVLKS 226

Query: 465 LFKAGCTGNAIRLFRNLQRHGFSPQLVTYNILINGLCKAGRLGEARRILNELGESG 632
            F++    + + +   ++  G++     Y  +I  L K GR+  A   + +L +SG
Sbjct: 227 CFRSKQYDHGLEIMSEMKSKGYTFDGFAYCTVIAALLKTGRMEGANLFMEQLMDSG 282


>ref|XP_007048731.1| Pentatricopeptide repeat superfamily protein, putative isoform 4
           [Theobroma cacao] gi|590710091|ref|XP_007048732.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 4 [Theobroma cacao] gi|508700992|gb|EOX92888.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 4 [Theobroma cacao] gi|508700993|gb|EOX92889.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 4 [Theobroma cacao]
          Length = 490

 Score =  280 bits (715), Expect = 4e-73
 Identities = 132/215 (61%), Positives = 169/215 (78%)
 Frame = +3

Query: 6   KLSTLSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYS 185
           +LST  LN+C++ FCK+ +++KAE+ II+ IRLG LP+ VTYN LI  Y R+VG DA YS
Sbjct: 37  RLSTRLLNVCIASFCKAHKLEKAESVIIDGIRLGVLPDGVTYNILIDAYCRLVGIDAGYS 96

Query: 186 ILHRIREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFF 365
           +LHR+ EAG++P+V++YNSL++ A R   +S++ +LFDEM+Q GI PD+W+YNTLMH FF
Sbjct: 97  VLHRMGEAGISPDVISYNSLIAGATRNCQISRSFNLFDEMIQRGIAPDIWSYNTLMHGFF 156

Query: 366 KSGRPDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLV 545
           K G+PDEANR+F DI+L    PC  TFN M+NGL K G T NA  LFRNLQRHGF P+L+
Sbjct: 157 KLGKPDEANRVFRDIILVEHLPCVATFNIMMNGLCKNGYTENAFMLFRNLQRHGFVPELM 216

Query: 546 TYNILINGLCKAGRLGEARRILNELGESGHVPNAI 650
           TYNIL++GLCK GRLG A RI  E+ ESGHVPNAI
Sbjct: 217 TYNILVSGLCKIGRLGLAMRIFKEIVESGHVPNAI 251



 Score =  101 bits (251), Expect = 2e-19
 Identities = 55/201 (27%), Positives = 99/201 (49%)
 Frame = +3

Query: 18  LSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHR 197
           ++ NI VS  CK  ++  A       +  G++PN +TY  ++    R   F+    +L  
Sbjct: 216 MTYNILVSGLCKIGRLGLAMRIFKEIVESGHVPNAITYTPVLRCCFRKRKFEEGLELLSE 275

Query: 198 IREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGR 377
           ++  G T +   Y +++   ++   + +  +   EM++ GIE D+ +YNTL++ + K  +
Sbjct: 276 MKSKGYTFDGFAYCTVIGALIKIGKMKEATEFMVEMMRTGIELDIVSYNTLINMYCKDNK 335

Query: 378 PDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNI 557
            +EA ++  DI    L   + T   MI+ L KAG    A R  + +   GF   L  YN 
Sbjct: 336 LEEAYKLLDDIEKKGLECDKYTHTIMIDALCKAGNIEGAARHLKYMSTMGFDSNLAAYNC 395

Query: 558 LINGLCKAGRLGEARRILNEL 620
            I+GLCK G++  A ++   +
Sbjct: 396 FIDGLCKVGQIDNAMKVFKSM 416



 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 57/208 (27%), Positives = 96/208 (46%)
 Frame = +3

Query: 21  SLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHRI 200
           + NI ++  CK+   + A     N  R G++P ++TYN L+    ++     A  I   I
Sbjct: 182 TFNIMMNGLCKNGYTENAFMLFRNLQRHGFVPELMTYNILVSGLCKIGRLGLAMRIFKEI 241

Query: 201 REAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGRP 380
            E+G  PN +TY  ++ C  R     + L+L  EM   G   D + Y T++    K G+ 
Sbjct: 242 VESGHVPNAITYTPVLRCCFRKRKFEEGLELLSEMKSKGYTFDGFAYCTVIGALIKIGKM 301

Query: 381 DEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNIL 560
            EA     +++   +     ++NT+IN   K      A +L  ++++ G      T+ I+
Sbjct: 302 KEATEFMVEMMRTGIELDIVSYNTLINMYCKDNKLEEAYKLLDDIEKKGLECDKYTHTIM 361

Query: 561 INGLCKAGRLGEARRILNELGESGHVPN 644
           I+ LCKAG +  A R L  +   G   N
Sbjct: 362 IDALCKAGNIEGAARHLKYMSTMGFDSN 389



 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 52/204 (25%), Positives = 97/204 (47%)
 Frame = +3

Query: 21  SLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHRI 200
           S N  +  F K  + D+A     + I + +LP V T+N ++    +    + A+ +   +
Sbjct: 147 SYNTLMHGFFKLGKPDEANRVFRDIILVEHLPCVATFNIMMNGLCKNGYTENAFMLFRNL 206

Query: 201 REAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGRP 380
           +  G  P ++TYN L+S   +   L   + +F E+++ G  P+  TY  ++ C F+  + 
Sbjct: 207 QRHGFVPELMTYNILVSGLCKIGRLGLAMRIFKEIVESGHVPNAITYTPVLRCCFRKRKF 266

Query: 381 DEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNIL 560
           +E   +  ++     T     + T+I  L K G    A      + R G    +V+YN L
Sbjct: 267 EEGLELLSEMKSKGYTFDGFAYCTVIGALIKIGKMKEATEFMVEMMRTGIELDIVSYNTL 326

Query: 561 INGLCKAGRLGEARRILNELGESG 632
           IN  CK  +L EA ++L+++ + G
Sbjct: 327 INMYCKDNKLEEAYKLLDDIEKKG 350


>ref|XP_007048729.1| Pentatricopeptide repeat superfamily protein, putative isoform 2
           [Theobroma cacao] gi|590710083|ref|XP_007048730.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 2 [Theobroma cacao] gi|508700990|gb|EOX92886.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 2 [Theobroma cacao] gi|508700991|gb|EOX92887.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 2 [Theobroma cacao]
          Length = 457

 Score =  280 bits (715), Expect = 4e-73
 Identities = 132/215 (61%), Positives = 169/215 (78%)
 Frame = +3

Query: 6   KLSTLSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYS 185
           +LST  LN+C++ FCK+ +++KAE+ II+ IRLG LP+ VTYN LI  Y R+VG DA YS
Sbjct: 4   RLSTRLLNVCIASFCKAHKLEKAESVIIDGIRLGVLPDGVTYNILIDAYCRLVGIDAGYS 63

Query: 186 ILHRIREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFF 365
           +LHR+ EAG++P+V++YNSL++ A R   +S++ +LFDEM+Q GI PD+W+YNTLMH FF
Sbjct: 64  VLHRMGEAGISPDVISYNSLIAGATRNCQISRSFNLFDEMIQRGIAPDIWSYNTLMHGFF 123

Query: 366 KSGRPDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLV 545
           K G+PDEANR+F DI+L    PC  TFN M+NGL K G T NA  LFRNLQRHGF P+L+
Sbjct: 124 KLGKPDEANRVFRDIILVEHLPCVATFNIMMNGLCKNGYTENAFMLFRNLQRHGFVPELM 183

Query: 546 TYNILINGLCKAGRLGEARRILNELGESGHVPNAI 650
           TYNIL++GLCK GRLG A RI  E+ ESGHVPNAI
Sbjct: 184 TYNILVSGLCKIGRLGLAMRIFKEIVESGHVPNAI 218



 Score =  101 bits (251), Expect = 2e-19
 Identities = 55/201 (27%), Positives = 99/201 (49%)
 Frame = +3

Query: 18  LSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHR 197
           ++ NI VS  CK  ++  A       +  G++PN +TY  ++    R   F+    +L  
Sbjct: 183 MTYNILVSGLCKIGRLGLAMRIFKEIVESGHVPNAITYTPVLRCCFRKRKFEEGLELLSE 242

Query: 198 IREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGR 377
           ++  G T +   Y +++   ++   + +  +   EM++ GIE D+ +YNTL++ + K  +
Sbjct: 243 MKSKGYTFDGFAYCTVIGALIKIGKMKEATEFMVEMMRTGIELDIVSYNTLINMYCKDNK 302

Query: 378 PDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNI 557
            +EA ++  DI    L   + T   MI+ L KAG    A R  + +   GF   L  YN 
Sbjct: 303 LEEAYKLLDDIEKKGLECDKYTHTIMIDALCKAGNIEGAARHLKYMSTMGFDSNLAAYNC 362

Query: 558 LINGLCKAGRLGEARRILNEL 620
            I+GLCK G++  A ++   +
Sbjct: 363 FIDGLCKVGQIDNAMKVFKSM 383



 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 57/208 (27%), Positives = 96/208 (46%)
 Frame = +3

Query: 21  SLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHRI 200
           + NI ++  CK+   + A     N  R G++P ++TYN L+    ++     A  I   I
Sbjct: 149 TFNIMMNGLCKNGYTENAFMLFRNLQRHGFVPELMTYNILVSGLCKIGRLGLAMRIFKEI 208

Query: 201 REAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGRP 380
            E+G  PN +TY  ++ C  R     + L+L  EM   G   D + Y T++    K G+ 
Sbjct: 209 VESGHVPNAITYTPVLRCCFRKRKFEEGLELLSEMKSKGYTFDGFAYCTVIGALIKIGKM 268

Query: 381 DEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNIL 560
            EA     +++   +     ++NT+IN   K      A +L  ++++ G      T+ I+
Sbjct: 269 KEATEFMVEMMRTGIELDIVSYNTLINMYCKDNKLEEAYKLLDDIEKKGLECDKYTHTIM 328

Query: 561 INGLCKAGRLGEARRILNELGESGHVPN 644
           I+ LCKAG +  A R L  +   G   N
Sbjct: 329 IDALCKAGNIEGAARHLKYMSTMGFDSN 356



 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 52/204 (25%), Positives = 97/204 (47%)
 Frame = +3

Query: 21  SLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHRI 200
           S N  +  F K  + D+A     + I + +LP V T+N ++    +    + A+ +   +
Sbjct: 114 SYNTLMHGFFKLGKPDEANRVFRDIILVEHLPCVATFNIMMNGLCKNGYTENAFMLFRNL 173

Query: 201 REAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGRP 380
           +  G  P ++TYN L+S   +   L   + +F E+++ G  P+  TY  ++ C F+  + 
Sbjct: 174 QRHGFVPELMTYNILVSGLCKIGRLGLAMRIFKEIVESGHVPNAITYTPVLRCCFRKRKF 233

Query: 381 DEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNIL 560
           +E   +  ++     T     + T+I  L K G    A      + R G    +V+YN L
Sbjct: 234 EEGLELLSEMKSKGYTFDGFAYCTVIGALIKIGKMKEATEFMVEMMRTGIELDIVSYNTL 293

Query: 561 INGLCKAGRLGEARRILNELGESG 632
           IN  CK  +L EA ++L+++ + G
Sbjct: 294 INMYCKDNKLEEAYKLLDDIEKKG 317


>ref|XP_007048728.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508700989|gb|EOX92885.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 1 [Theobroma cacao]
          Length = 505

 Score =  280 bits (715), Expect = 4e-73
 Identities = 132/215 (61%), Positives = 169/215 (78%)
 Frame = +3

Query: 6   KLSTLSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYS 185
           +LST  LN+C++ FCK+ +++KAE+ II+ IRLG LP+ VTYN LI  Y R+VG DA YS
Sbjct: 52  RLSTRLLNVCIASFCKAHKLEKAESVIIDGIRLGVLPDGVTYNILIDAYCRLVGIDAGYS 111

Query: 186 ILHRIREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFF 365
           +LHR+ EAG++P+V++YNSL++ A R   +S++ +LFDEM+Q GI PD+W+YNTLMH FF
Sbjct: 112 VLHRMGEAGISPDVISYNSLIAGATRNCQISRSFNLFDEMIQRGIAPDIWSYNTLMHGFF 171

Query: 366 KSGRPDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLV 545
           K G+PDEANR+F DI+L    PC  TFN M+NGL K G T NA  LFRNLQRHGF P+L+
Sbjct: 172 KLGKPDEANRVFRDIILVEHLPCVATFNIMMNGLCKNGYTENAFMLFRNLQRHGFVPELM 231

Query: 546 TYNILINGLCKAGRLGEARRILNELGESGHVPNAI 650
           TYNIL++GLCK GRLG A RI  E+ ESGHVPNAI
Sbjct: 232 TYNILVSGLCKIGRLGLAMRIFKEIVESGHVPNAI 266



 Score =  101 bits (251), Expect = 2e-19
 Identities = 55/201 (27%), Positives = 99/201 (49%)
 Frame = +3

Query: 18  LSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHR 197
           ++ NI VS  CK  ++  A       +  G++PN +TY  ++    R   F+    +L  
Sbjct: 231 MTYNILVSGLCKIGRLGLAMRIFKEIVESGHVPNAITYTPVLRCCFRKRKFEEGLELLSE 290

Query: 198 IREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGR 377
           ++  G T +   Y +++   ++   + +  +   EM++ GIE D+ +YNTL++ + K  +
Sbjct: 291 MKSKGYTFDGFAYCTVIGALIKIGKMKEATEFMVEMMRTGIELDIVSYNTLINMYCKDNK 350

Query: 378 PDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNI 557
            +EA ++  DI    L   + T   MI+ L KAG    A R  + +   GF   L  YN 
Sbjct: 351 LEEAYKLLDDIEKKGLECDKYTHTIMIDALCKAGNIEGAARHLKYMSTMGFDSNLAAYNC 410

Query: 558 LINGLCKAGRLGEARRILNEL 620
            I+GLCK G++  A ++   +
Sbjct: 411 FIDGLCKVGQIDNAMKVFKSM 431



 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 57/208 (27%), Positives = 96/208 (46%)
 Frame = +3

Query: 21  SLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHRI 200
           + NI ++  CK+   + A     N  R G++P ++TYN L+    ++     A  I   I
Sbjct: 197 TFNIMMNGLCKNGYTENAFMLFRNLQRHGFVPELMTYNILVSGLCKIGRLGLAMRIFKEI 256

Query: 201 REAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGRP 380
            E+G  PN +TY  ++ C  R     + L+L  EM   G   D + Y T++    K G+ 
Sbjct: 257 VESGHVPNAITYTPVLRCCFRKRKFEEGLELLSEMKSKGYTFDGFAYCTVIGALIKIGKM 316

Query: 381 DEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNIL 560
            EA     +++   +     ++NT+IN   K      A +L  ++++ G      T+ I+
Sbjct: 317 KEATEFMVEMMRTGIELDIVSYNTLINMYCKDNKLEEAYKLLDDIEKKGLECDKYTHTIM 376

Query: 561 INGLCKAGRLGEARRILNELGESGHVPN 644
           I+ LCKAG +  A R L  +   G   N
Sbjct: 377 IDALCKAGNIEGAARHLKYMSTMGFDSN 404



 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 52/204 (25%), Positives = 97/204 (47%)
 Frame = +3

Query: 21  SLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHRI 200
           S N  +  F K  + D+A     + I + +LP V T+N ++    +    + A+ +   +
Sbjct: 162 SYNTLMHGFFKLGKPDEANRVFRDIILVEHLPCVATFNIMMNGLCKNGYTENAFMLFRNL 221

Query: 201 REAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGRP 380
           +  G  P ++TYN L+S   +   L   + +F E+++ G  P+  TY  ++ C F+  + 
Sbjct: 222 QRHGFVPELMTYNILVSGLCKIGRLGLAMRIFKEIVESGHVPNAITYTPVLRCCFRKRKF 281

Query: 381 DEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNIL 560
           +E   +  ++     T     + T+I  L K G    A      + R G    +V+YN L
Sbjct: 282 EEGLELLSEMKSKGYTFDGFAYCTVIGALIKIGKMKEATEFMVEMMRTGIELDIVSYNTL 341

Query: 561 INGLCKAGRLGEARRILNELGESG 632
           IN  CK  +L EA ++L+++ + G
Sbjct: 342 INMYCKDNKLEEAYKLLDDIEKKG 365


>ref|XP_007215356.1| hypothetical protein PRUPE_ppa005519mg [Prunus persica]
           gi|462411506|gb|EMJ16555.1| hypothetical protein
           PRUPE_ppa005519mg [Prunus persica]
          Length = 456

 Score =  278 bits (710), Expect = 1e-72
 Identities = 138/214 (64%), Positives = 169/214 (78%)
 Frame = +3

Query: 9   LSTLSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSI 188
           LST  LNIC++ FCK + ++KAEA II+  RLG +P+VVTYNTL+  Y R V  DAAYS+
Sbjct: 5   LSTKLLNICIASFCKVRLLEKAEAIIIDGERLGVIPDVVTYNTLVSAYYRYVSLDAAYSV 64

Query: 189 LHRIREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFK 368
           +HR++EAG++P+VVTYNSL++ + R  LLS++LDLF+EMLQ GI PDVW+YN LM+CFFK
Sbjct: 65  IHRMKEAGISPDVVTYNSLIAGSTRDCLLSQSLDLFEEMLQAGIHPDVWSYNILMNCFFK 124

Query: 369 SGRPDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVT 548
            G+PDEANR+F DI+L+NL     TFN MINGL K     NA+ LFRNLQRHGF PQLVT
Sbjct: 125 LGKPDEANRVFQDILLSNLASHPATFNIMINGLCKNEYIDNALMLFRNLQRHGFVPQLVT 184

Query: 549 YNILINGLCKAGRLGEARRILNELGESGHVPNAI 650
           YNILINGLCKA RL +AR +L ELGES   PNAI
Sbjct: 185 YNILINGLCKARRLRQARTMLRELGESDLEPNAI 218



 Score =  111 bits (278), Expect = 2e-22
 Identities = 64/210 (30%), Positives = 105/210 (50%)
 Frame = +3

Query: 21  SLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHRI 200
           + NI ++  CK++ ID A     N  R G++P +VTYN LI    +      A ++L  +
Sbjct: 149 TFNIMINGLCKNEYIDNALMLFRNLQRHGFVPQLVTYNILINGLCKARRLRQARTMLREL 208

Query: 201 REAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGRP 380
            E+ L PN +TY ++M C  R     K LD+  EM   G   D + Y T++    K+GR 
Sbjct: 209 GESDLEPNAITYTTVMKCCFRSKQYDKGLDIMSEMKSKGYTFDSFAYCTVVAALVKTGRI 268

Query: 381 DEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNIL 560
           +EAN     ++ N +      +NT++N   + G    A +L   +++ G      T+ I+
Sbjct: 269 EEANACMEQVMSNGIELDLAAYNTLLNMYCREGKFEAAYKLLDEIEKGGLLCDKYTHTII 328

Query: 561 INGLCKAGRLGEARRILNELGESGHVPNAI 650
           I+GLCKAG +  A+  L+ +   G   N +
Sbjct: 329 IDGLCKAGNITGAQHHLHYMKMMGFHENLV 358



 Score = 79.7 bits (195), Expect = 7e-13
 Identities = 50/204 (24%), Positives = 92/204 (45%)
 Frame = +3

Query: 21  SLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHRI 200
           S NI ++ F K  + D+A     + +      +  T+N +I    +    D A  +   +
Sbjct: 114 SYNILMNCFFKLGKPDEANRVFQDILLSNLASHPATFNIMINGLCKNEYIDNALMLFRNL 173

Query: 201 REAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGRP 380
           +  G  P +VTYN L++   +   L +   +  E+ +  +EP+  TY T+M C F+S + 
Sbjct: 174 QRHGFVPQLVTYNILINGLCKARRLRQARTMLRELGESDLEPNAITYTTVMKCCFRSKQY 233

Query: 381 DEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNIL 560
           D+   I  ++     T     + T++  L K G    A      +  +G    L  YN L
Sbjct: 234 DKGLDIMSEMKSKGYTFDSFAYCTVVAALVKTGRIEEANACMEQVMSNGIELDLAAYNTL 293

Query: 561 INGLCKAGRLGEARRILNELGESG 632
           +N  C+ G+   A ++L+E+ + G
Sbjct: 294 LNMYCREGKFEAAYKLLDEIEKGG 317


>ref|XP_006357835.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like isoform X1 [Solanum tuberosum]
           gi|565383043|ref|XP_006357836.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like isoform X2 [Solanum tuberosum]
           gi|565383045|ref|XP_006357837.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like isoform X3 [Solanum tuberosum]
          Length = 460

 Score =  275 bits (703), Expect = 9e-72
 Identities = 130/215 (60%), Positives = 171/215 (79%)
 Frame = +3

Query: 6   KLSTLSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYS 185
           KLST  +N+CV+  CK+++++KAE  I++ +R+G  P+VVTYNTLI  Y R VG DA YS
Sbjct: 7   KLSTRLMNVCVASLCKAKKLEKAEIVIVDGVRIGLQPDVVTYNTLIAAYCRFVGIDAGYS 66

Query: 186 ILHRIREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFF 365
           IL+R+++AG+ P+V+TYN+L++ A RYSLLSK LDLFDEML+  I PD+W+YN+LM+CFF
Sbjct: 67  ILNRMKDAGINPDVITYNALIAGATRYSLLSKCLDLFDEMLEMRILPDIWSYNSLMNCFF 126

Query: 366 KSGRPDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLV 545
           K G+PDEA R+F DI+L +++    TFN +INGL   G T NA+ LFR+L+RHGF PQLV
Sbjct: 127 KFGKPDEAYRVFQDILLKDISVHSATFNILINGLCMNGYTENALMLFRSLKRHGFIPQLV 186

Query: 546 TYNILINGLCKAGRLGEARRILNELGESGHVPNAI 650
           TYNILI+GLCK+GR   AR  LNEL ESGH+PNAI
Sbjct: 187 TYNILIHGLCKSGRGNVAREFLNELVESGHIPNAI 221



 Score =  107 bits (266), Expect = 4e-21
 Identities = 64/210 (30%), Positives = 99/210 (47%)
 Frame = +3

Query: 21  SLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHRI 200
           + NI ++  C +   + A     +  R G++P +VTYN LI    +    + A   L+ +
Sbjct: 152 TFNILINGLCMNGYTENALMLFRSLKRHGFIPQLVTYNILIHGLCKSGRGNVAREFLNEL 211

Query: 201 REAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGRP 380
            E+G  PN +TY ++M C  RY    + L +F EM   G   D + Y T+     K+GR 
Sbjct: 212 VESGHIPNAITYTTVMKCCFRYRQFEEGLKIFAEMRNKGYTYDAFAYCTVASMLLKTGRI 271

Query: 381 DEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNIL 560
            EAN     I+ +  T    +FNT+ N   K G   NA +L    +  G      T+ I 
Sbjct: 272 TEANEYLGYIITSGFTLDIVSFNTIFNLYCKEGQLDNAYKLLYEAENGGLESDKYTHAIW 331

Query: 561 INGLCKAGRLGEARRILNELGESGHVPNAI 650
           I+GLC+ G   EA++ LN +   G   N +
Sbjct: 332 IDGLCRTGNFQEAQQQLNRMSVMGFDSNLV 361


>ref|XP_004232338.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like isoform 1 [Solanum lycopersicum]
           gi|460373057|ref|XP_004232339.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like isoform 2 [Solanum lycopersicum]
          Length = 460

 Score =  274 bits (701), Expect = 2e-71
 Identities = 131/215 (60%), Positives = 171/215 (79%)
 Frame = +3

Query: 6   KLSTLSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYS 185
           KLST  +N+CV+  CK++Q++KAE  I++ IR+G  P+VVTYNTLI  Y R VG DA YS
Sbjct: 7   KLSTRLMNVCVASLCKAKQLEKAEIVIVDGIRIGLQPDVVTYNTLIAAYCRFVGIDAGYS 66

Query: 186 ILHRIREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFF 365
           IL+R+++AG+ P+V+TYN+L++ A R SLLSK LDLFDEML+  I PD+W+YNTLM+CFF
Sbjct: 67  ILNRMKDAGINPDVITYNALIAGATRNSLLSKCLDLFDEMLEMRILPDIWSYNTLMNCFF 126

Query: 366 KSGRPDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLV 545
           K G+PDEA R+F DI+L +++    TF+ +INGL   G T NA+ LFR+L+RHGF+PQLV
Sbjct: 127 KFGKPDEAYRVFQDILLKDISVHSATFSILINGLCMNGYTENALMLFRSLKRHGFTPQLV 186

Query: 546 TYNILINGLCKAGRLGEARRILNELGESGHVPNAI 650
           TYNILI+GLCK+GR   AR  LNEL ESGH+PNAI
Sbjct: 187 TYNILIHGLCKSGRGNVAREFLNELVESGHIPNAI 221



 Score =  105 bits (261), Expect = 2e-20
 Identities = 63/210 (30%), Positives = 99/210 (47%)
 Frame = +3

Query: 21  SLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHRI 200
           + +I ++  C +   + A     +  R G+ P +VTYN LI    +    + A   L+ +
Sbjct: 152 TFSILINGLCMNGYTENALMLFRSLKRHGFTPQLVTYNILIHGLCKSGRGNVAREFLNEL 211

Query: 201 REAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGRP 380
            E+G  PN +TY ++M C  RY    + L +F EM   G   D + Y T+     K+GR 
Sbjct: 212 VESGHIPNAITYTTVMKCCFRYRQFEEGLKIFAEMRNKGYTYDAFAYCTVTSMLLKTGRI 271

Query: 381 DEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNIL 560
            EAN     I+ +  T    +FNT+ N   K G   NA +L    +  G      T+ I 
Sbjct: 272 TEANEYLGYIITSGFTLDIVSFNTIFNVYCKEGQLDNAYKLLYEAENGGLESDKFTHAIW 331

Query: 561 INGLCKAGRLGEARRILNELGESGHVPNAI 650
           I+GLC+ G   EA++ LN +  +G   N +
Sbjct: 332 IDGLCRTGNFQEAQQQLNRMSVTGFDSNLV 361


>ref|XP_004499962.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like isoform X1 [Cicer arietinum]
           gi|502128438|ref|XP_004499963.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like isoform X2 [Cicer arietinum]
           gi|502128441|ref|XP_004499964.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like isoform X3 [Cicer arietinum]
          Length = 457

 Score =  271 bits (693), Expect = 1e-70
 Identities = 133/216 (61%), Positives = 165/216 (76%), Gaps = 1/216 (0%)
 Frame = +3

Query: 6   KLSTLSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYS 185
           +LST  +NIC+S  CKS QI KAE  +I+ I+LG  P++ TYNTLI  Y R V  DAAY+
Sbjct: 4   RLSTKFMNICISTMCKSNQISKAEVVLIDGIKLGVYPDIFTYNTLINGYCRFVSLDAAYN 63

Query: 186 ILHRIREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFF 365
           IL+R++EAG+ P+VV+YNSL+S AVR S LSK+L LFDEMLQ GI PDVW+YN LMHC F
Sbjct: 64  ILNRMKEAGINPDVVSYNSLISGAVRKSHLSKSLQLFDEMLQSGIRPDVWSYNILMHCLF 123

Query: 366 KSGRPDEANRIFHDIV-LNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQL 542
           + G+P+EAN +F DIV    + PC +T+N MINGL K G   NA+ LFRNLQRHGF PQ+
Sbjct: 124 RLGKPEEANSVFKDIVESGEMYPCTSTYNVMINGLCKNGYVKNAVMLFRNLQRHGFVPQV 183

Query: 543 VTYNILINGLCKAGRLGEARRILNELGESGHVPNAI 650
           +TYN +INGLCKA RLG+ARR+L E  E G+ PNAI
Sbjct: 184 LTYNTMINGLCKAKRLGDARRVLREFCEYGYEPNAI 219



 Score =  115 bits (287), Expect = 2e-23
 Identities = 64/206 (31%), Positives = 104/206 (50%)
 Frame = +3

Query: 15  TLSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILH 194
           T + N+ ++  CK+  +  A     N  R G++P V+TYNT+I    +      A  +L 
Sbjct: 148 TSTYNVMINGLCKNGYVKNAVMLFRNLQRHGFVPQVLTYNTMINGLCKAKRLGDARRVLR 207

Query: 195 RIREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSG 374
              E G  PN +TY ++M C  R   L + L++  EM   G   D + Y T++    K+G
Sbjct: 208 EFCEYGYEPNAITYTTVMKCCFRCGRLEQGLEILSEMRMKGYTFDGFAYCTVVAALVKTG 267

Query: 375 RPDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYN 554
           R +EA+ I   ++ N L P   ++NTMIN   + G   +A++L   ++R G      T+ 
Sbjct: 268 RIEEADEIAQKMMSNGLVPDLASYNTMINLFCRQGRFDDALKLVDKIERQGLKCDQYTHT 327

Query: 555 ILINGLCKAGRLGEARRILNELGESG 632
           I+I+GLCK G    A + L+ +   G
Sbjct: 328 IIIHGLCKVGDFAGAEKHLDFMNSLG 353



 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 53/201 (26%), Positives = 101/201 (50%)
 Frame = +3

Query: 18  LSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHR 197
           L+ N  ++  CK++++  A   +      GY PN +TY T++    R    +    IL  
Sbjct: 184 LTYNTMINGLCKAKRLGDARRVLREFCEYGYEPNAITYTTVMKCCFRCGRLEQGLEILSE 243

Query: 198 IREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGR 377
           +R  G T +   Y ++++  V+   + +  ++  +M+  G+ PD+ +YNT+++ F + GR
Sbjct: 244 MRMKGYTFDGFAYCTVVAALVKTGRIEEADEIAQKMMSNGLVPDLASYNTMINLFCRQGR 303

Query: 378 PDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNI 557
            D+A ++   I    L   + T   +I+GL K G    A +    +   GF   LV +N 
Sbjct: 304 FDDALKLVDKIERQGLKCDQYTHTIIIHGLCKVGDFAGAEKHLDFMNSLGFGFNLVAFNC 363

Query: 558 LINGLCKAGRLGEARRILNEL 620
           LI+ L KAG + +A ++ + +
Sbjct: 364 LIDCLGKAGHIDQAMKVFDSM 384


>ref|XP_002532784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527472|gb|EEF29603.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 487

 Score =  270 bits (690), Expect = 3e-70
 Identities = 133/215 (61%), Positives = 169/215 (78%)
 Frame = +3

Query: 6   KLSTLSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYS 185
           +LST  LNI ++  CK+++++KAE+ II+ IRLG LP+VVTYNTLI  YSR V F+AAYS
Sbjct: 34  RLSTRLLNISIASLCKAKELNKAESVIIDGIRLGVLPDVVTYNTLIDAYSRFVSFNAAYS 93

Query: 186 ILHRIREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFF 365
           +L+R+REA ++P+VVTYNSL++ A R  LL ++L+LFDEML  GI PDVW+YNTLMHCFF
Sbjct: 94  LLNRMREASISPDVVTYNSLIAGAARNCLLLESLNLFDEMLNMGIVPDVWSYNTLMHCFF 153

Query: 366 KSGRPDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLV 545
           K G+ +EAN +   I  + L+PC TTFN MINGL K G T NA+ LFR+L++HGF PQL+
Sbjct: 154 KLGKAEEANEVLRQIFGHGLSPCPTTFNIMINGLCKNGFTSNALMLFRSLKQHGFVPQLI 213

Query: 546 TYNILINGLCKAGRLGEARRILNELGESGHVPNAI 650
           TYNILINGLCK  RL  AR +L EL  SG+VPNAI
Sbjct: 214 TYNILINGLCKDRRLRAARSMLKELETSGYVPNAI 248



 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 58/204 (28%), Positives = 99/204 (48%)
 Frame = +3

Query: 21  SLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHRI 200
           + NI ++  CK+     A     +  + G++P ++TYN LI    +     AA S+L  +
Sbjct: 179 TFNIMINGLCKNGFTSNALMLFRSLKQHGFVPQLITYNILINGLCKDRRLRAARSMLKEL 238

Query: 201 REAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGRP 380
             +G  PN +TY ++M    R     + L++  EM+  G   D + Y T++    K+GR 
Sbjct: 239 ETSGYVPNAITYTTVMKFCFRSRRFKQGLEILQEMIDKGYTFDGFAYCTVVGVLIKTGRL 298

Query: 381 DEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNIL 560
           +EA      ++ N +     ++NT+IN   K G    A +L   +++ G      T+ IL
Sbjct: 299 EEATEYMRQMIKNGIEHDLASYNTLINLYCKQGNLEAAYQLLDEIEKEGLQCDEYTHTIL 358

Query: 561 INGLCKAGRLGEARRILNELGESG 632
           IN +CKAG +  ARR +  +   G
Sbjct: 359 INWMCKAGNILGARRHMQHMNMMG 382



 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 54/201 (26%), Positives = 102/201 (50%)
 Frame = +3

Query: 18  LSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHR 197
           ++ NI ++  CK +++  A + +      GY+PN +TY T++    R   F     IL  
Sbjct: 213 ITYNILINGLCKDRRLRAARSMLKELETSGYVPNAITYTTVMKFCFRSRRFKQGLEILQE 272

Query: 198 IREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGR 377
           + + G T +   Y +++   ++   L +  +   +M++ GIE D+ +YNTL++ + K G 
Sbjct: 273 MIDKGYTFDGFAYCTVVGVLIKTGRLEEATEYMRQMIKNGIEHDLASYNTLINLYCKQGN 332

Query: 378 PDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNI 557
            + A ++  +I    L   E T   +IN + KAG    A R  +++   GF   LV  N 
Sbjct: 333 LEAAYQLLDEIEKEGLQCDEYTHTILINWMCKAGNILGARRHMQHMNMMGFDSCLVALNC 392

Query: 558 LINGLCKAGRLGEARRILNEL 620
           +++GLCK G++  A ++   +
Sbjct: 393 MVDGLCKNGQIDHAVKLFESM 413



 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
 Frame = +3

Query: 96  IRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHRIREAGLTPNVVTYNSLMSCAVRYSLL 275
           + +G +P+V +YNTL+  + ++   + A  +L +I   GL+P   T+N +++   +    
Sbjct: 134 LNMGIVPDVWSYNTLMHCFFKLGKAEEANEVLRQIFGHGLSPCPTTFNIMINGLCKNGFT 193

Query: 276 SKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGRPDEANRIFHDIVLNNLTPCETTFN-- 449
           S  L LF  + Q G  P + TYN L++   K  R   A  +  ++  +   P   T+   
Sbjct: 194 SNALMLFRSLKQHGFVPQLITYNILINGLCKDRRLRAARSMLKELETSGYVPNAITYTTV 253

Query: 450 ---------------------------------TMINGLFKAGCTGNAIRLFRNLQRHGF 530
                                            T++  L K G    A    R + ++G 
Sbjct: 254 MKFCFRSRRFKQGLEILQEMIDKGYTFDGFAYCTVVGVLIKTGRLEEATEYMRQMIKNGI 313

Query: 531 SPQLVTYNILINGLCKAGRLGEARRILNELGESG 632
              L +YN LIN  CK G L  A ++L+E+ + G
Sbjct: 314 EHDLASYNTLINLYCKQGNLEAAYQLLDEIEKEG 347


>ref|XP_004243786.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Solanum lycopersicum]
          Length = 460

 Score =  270 bits (689), Expect = 4e-70
 Identities = 126/215 (58%), Positives = 166/215 (77%)
 Frame = +3

Query: 6   KLSTLSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYS 185
           +LST  +NICV+  CK++Q++KAE  I++ IR+G  P+VVTYNTLI  Y R VG DA YS
Sbjct: 7   RLSTRLMNICVASLCKAKQLEKAEVVIVDGIRIGVQPDVVTYNTLITAYCRFVGIDAGYS 66

Query: 186 ILHRIREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFF 365
           +L+R++EAG+ P+ +TYNSL++ A RY ++S+  DLF+EML+  I PD+W+YNTLMHCFF
Sbjct: 67  VLYRMKEAGIYPDTITYNSLIAGATRYCMISRCFDLFEEMLEMSILPDIWSYNTLMHCFF 126

Query: 366 KSGRPDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLV 545
           K  +PDEA R+F DI+L N++    TFN +INGL   G T NA+ LFR+++RHGF PQL 
Sbjct: 127 KLRKPDEAYRVFQDILLKNISVHPATFNILINGLCMNGYTENALMLFRSIKRHGFIPQLA 186

Query: 546 TYNILINGLCKAGRLGEARRILNELGESGHVPNAI 650
           TYNILI+GLCK+GR   AR  LNEL ESGH+PNAI
Sbjct: 187 TYNILIHGLCKSGRGKTAREFLNELVESGHIPNAI 221



 Score =  102 bits (255), Expect = 8e-20
 Identities = 59/210 (28%), Positives = 99/210 (47%)
 Frame = +3

Query: 21  SLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHRI 200
           + NI ++  C +   + A     +  R G++P + TYN LI    +      A   L+ +
Sbjct: 152 TFNILINGLCMNGYTENALMLFRSIKRHGFIPQLATYNILIHGLCKSGRGKTAREFLNEL 211

Query: 201 REAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGRP 380
            E+G  PN +TY ++M C  +     + L +F EM + G   D + Y T+     K+G+ 
Sbjct: 212 VESGHIPNAITYTTVMKCCFKCEQFEEGLKIFAEMRRKGYTYDAFAYCTVASMLLKTGKM 271

Query: 381 DEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNIL 560
           +EAN     I+ N       +FNT++N   K G   NA +L    ++ G      T+ I 
Sbjct: 272 NEANEYLGYIITNGFDLDMVSFNTIVNLYCKEGQLDNAYKLLHEAEKKGLESDKYTHTIF 331

Query: 561 INGLCKAGRLGEARRILNELGESGHVPNAI 650
           I+GLC+ G   EA++ L+ +   G   N +
Sbjct: 332 IDGLCRTGNFKEAQQHLDYMSMMGFDSNLV 361



 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 45/179 (25%), Positives = 85/179 (47%)
 Frame = +3

Query: 96  IRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHRIREAGLTPNVVTYNSLMSCAVRYSLL 275
           + +  LP++ +YNTL+  + ++   D AY +   I    ++ +  T+N L++        
Sbjct: 107 LEMSILPDIWSYNTLMHCFFKLRKPDEAYRVFQDILLKNISVHPATFNILINGLCMNGYT 166

Query: 276 SKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGRPDEANRIFHDIVLNNLTPCETTFNTM 455
              L LF  + + G  P + TYN L+H   KSGR   A    +++V +   P   T+ T+
Sbjct: 167 ENALMLFRSIKRHGFIPQLATYNILIHGLCKSGRGKTAREFLNELVESGHIPNAITYTTV 226

Query: 456 INGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNILINGLCKAGRLGEARRILNELGESG 632
           +   FK       +++F  ++R G++     Y  + + L K G++ EA   L  +  +G
Sbjct: 227 MKCCFKCEQFEEGLKIFAEMRRKGYTYDAFAYCTVASMLLKTGKMNEANEYLGYIITNG 285



 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 44/194 (22%), Positives = 89/194 (45%)
 Frame = +3

Query: 39  SLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHRIREAGLT 218
           S+  K+ ++++A   +   I  G+  ++V++NT++  Y +    D AY +LH   + GL 
Sbjct: 263 SMLLKTGKMNEANEYLGYIITNGFDLDMVSFNTIVNLYCKEGQLDNAYKLLHEAEKKGLE 322

Query: 219 PNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGRPDEANRI 398
            +  T+   +    R     +     D M   G + ++   N+ ++   K+G  D A R+
Sbjct: 323 SDKYTHTIFIDGLCRTGNFKEAQQHLDYMSMMGFDSNLVALNSFINGLCKAGHLDHALRM 382

Query: 399 FHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNILINGLCK 578
           F  +   +      T++TM++ L  A     A +L  +  R G          +I+GL  
Sbjct: 383 FESMDAKD----SITYSTMVHSLCNARRFRAASKLLLSCIRGGMRILKSDKRGVIDGLRG 438

Query: 579 AGRLGEARRILNEL 620
           +G   EA++I +++
Sbjct: 439 SGYSQEAKKIQSKI 452


>ref|XP_006348886.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Solanum tuberosum]
          Length = 460

 Score =  266 bits (680), Expect = 4e-69
 Identities = 125/215 (58%), Positives = 166/215 (77%)
 Frame = +3

Query: 6   KLSTLSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYS 185
           +LST  +NICV+  CK++Q++KAE  I++ IR+G  P+VVTYNTLI  Y R VG DA YS
Sbjct: 7   RLSTRLMNICVASLCKAKQLEKAEVVIVDGIRIGVQPDVVTYNTLITAYCRFVGIDAGYS 66

Query: 186 ILHRIREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFF 365
           IL+R++EAG+ P+ +TYNSL++ A RY ++S+  +LF+EML+  I PD+W+YNTLMHCFF
Sbjct: 67  ILYRMKEAGIYPDTITYNSLIAGATRYCMISRCFNLFEEMLEMSILPDIWSYNTLMHCFF 126

Query: 366 KSGRPDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLV 545
           K  +PDEA R+F DI+L +++    TFN +INGL   G T NA+ LFR+++RHGF PQL 
Sbjct: 127 KLRKPDEAYRVFQDILLKDISVHPATFNILINGLCMNGYTENALMLFRSIKRHGFIPQLA 186

Query: 546 TYNILINGLCKAGRLGEARRILNELGESGHVPNAI 650
           TYNILI+GLCK+GR   AR  LNEL ESGH+PNAI
Sbjct: 187 TYNILIHGLCKSGRGKTAREFLNELVESGHIPNAI 221



 Score =  103 bits (258), Expect = 4e-20
 Identities = 60/210 (28%), Positives = 99/210 (47%)
 Frame = +3

Query: 21  SLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHRI 200
           + NI ++  C +   + A     +  R G++P + TYN LI    +      A   L+ +
Sbjct: 152 TFNILINGLCMNGYTENALMLFRSIKRHGFIPQLATYNILIHGLCKSGRGKTAREFLNEL 211

Query: 201 REAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGRP 380
            E+G  PN +TY ++M C  R     + L +F EM + G   D + Y T+     K+G+ 
Sbjct: 212 VESGHIPNAITYTTVMKCCFRCRQFEEGLKIFSEMRRKGYTYDAFAYCTVASMLLKTGKM 271

Query: 381 DEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNIL 560
           +EAN     I+ N       +FNT++N   K G   NA +L    ++ G      T+ I 
Sbjct: 272 NEANEYLGYIITNGFDLDIVSFNTIVNLYCKEGQLDNAYKLLHEAEKKGLESDKYTHTIF 331

Query: 561 INGLCKAGRLGEARRILNELGESGHVPNAI 650
           I+GLC+ G   EA++ L+ +   G   N +
Sbjct: 332 IDGLCRTGNFKEAQQHLDYMSMMGFDSNLV 361



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 44/179 (24%), Positives = 85/179 (47%)
 Frame = +3

Query: 96  IRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHRIREAGLTPNVVTYNSLMSCAVRYSLL 275
           + +  LP++ +YNTL+  + ++   D AY +   I    ++ +  T+N L++        
Sbjct: 107 LEMSILPDIWSYNTLMHCFFKLRKPDEAYRVFQDILLKDISVHPATFNILINGLCMNGYT 166

Query: 276 SKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGRPDEANRIFHDIVLNNLTPCETTFNTM 455
              L LF  + + G  P + TYN L+H   KSGR   A    +++V +   P   T+ T+
Sbjct: 167 ENALMLFRSIKRHGFIPQLATYNILIHGLCKSGRGKTAREFLNELVESGHIPNAITYTTV 226

Query: 456 INGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNILINGLCKAGRLGEARRILNELGESG 632
           +   F+       +++F  ++R G++     Y  + + L K G++ EA   L  +  +G
Sbjct: 227 MKCCFRCRQFEEGLKIFSEMRRKGYTYDAFAYCTVASMLLKTGKMNEANEYLGYIITNG 285



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 44/194 (22%), Positives = 89/194 (45%)
 Frame = +3

Query: 39  SLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHRIREAGLT 218
           S+  K+ ++++A   +   I  G+  ++V++NT++  Y +    D AY +LH   + GL 
Sbjct: 263 SMLLKTGKMNEANEYLGYIITNGFDLDIVSFNTIVNLYCKEGQLDNAYKLLHEAEKKGLE 322

Query: 219 PNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGRPDEANRI 398
            +  T+   +    R     +     D M   G + ++   N+ ++   K+G  D A R+
Sbjct: 323 SDKYTHTIFIDGLCRTGNFKEAQQHLDYMSMMGFDSNLVALNSFINGLCKAGHLDHALRM 382

Query: 399 FHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNILINGLCK 578
           F  +   +      T++TM++ L  A     A +L  +  R G          +I+GL  
Sbjct: 383 FESMDAKD----SITYSTMVHSLCNARRFRAASKLLLSCIRGGMRILKSDKRGVIDGLRG 438

Query: 579 AGRLGEARRILNEL 620
           +G   EAR++ +++
Sbjct: 439 SGYSQEARKVQSKI 452


>ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like isoform X1 [Glycine max]
           gi|571444666|ref|XP_006576572.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like isoform X2 [Glycine max]
           gi|571444669|ref|XP_006576573.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like isoform X3 [Glycine max]
           gi|571444671|ref|XP_006576574.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like isoform X4 [Glycine max]
           gi|571444673|ref|XP_006576575.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like isoform X5 [Glycine max]
          Length = 461

 Score =  259 bits (662), Expect = 5e-67
 Identities = 130/214 (60%), Positives = 163/214 (76%)
 Frame = +3

Query: 9   LSTLSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSI 188
           LST  LNI VS  CK++QI  AE AI++ IRLG LP+VVTYNTLI  Y R    D AYS+
Sbjct: 11  LSTKLLNITVSSLCKAKQIPNAETAIVDGIRLGVLPDVVTYNTLIDAYCRFATLDVAYSV 70

Query: 189 LHRIREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFK 368
           L R+ +AG+ P+VV++N+L+S AVR SL SK+LDLFDEML+ GI PD W++N LM+C F+
Sbjct: 71  LARMHDAGIPPDVVSFNTLISGAVRKSLFSKSLDLFDEMLKRGINPDAWSHNILMNCLFQ 130

Query: 369 SGRPDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVT 548
            G+PDEANR+F +IVL +      T+N MINGL K G  GNA+ LFRNLQRHGF PQ++T
Sbjct: 131 LGKPDEANRVFKEIVLRDEVH-PATYNIMINGLCKNGYVGNALSLFRNLQRHGFVPQVLT 189

Query: 549 YNILINGLCKAGRLGEARRILNELGESGHVPNAI 650
           YN LINGLCKA RL +ARR+L E GE+G+ PNA+
Sbjct: 190 YNALINGLCKARRLKDARRVLKEFGETGNEPNAV 223



 Score =  116 bits (290), Expect = 7e-24
 Identities = 66/208 (31%), Positives = 104/208 (50%)
 Frame = +3

Query: 27  NICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHRIRE 206
           NI ++  CK+  +  A +   N  R G++P V+TYN LI    +      A  +L    E
Sbjct: 156 NIMINGLCKNGYVGNALSLFRNLQRHGFVPQVLTYNALINGLCKARRLKDARRVLKEFGE 215

Query: 207 AGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGRPDE 386
            G  PN VTY ++M+C  R  L  + L++  EM   G   D + Y T++    K+GR  E
Sbjct: 216 TGNEPNAVTYTTVMTCCFRCRLFEEGLEILSEMRSLGFTFDGFAYCTVIAAMIKTGRMQE 275

Query: 387 ANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNILIN 566
           A  I   +V + + P   ++NT+IN   + G   +A+RL   ++  G      T+ I+++
Sbjct: 276 AEEIVEMMVSSGVRPDLVSYNTLINLYCRQGRLDDALRLLDEIEGEGLECDQYTHTIIVD 335

Query: 567 GLCKAGRLGEARRILNELGESGHVPNAI 650
           GLCKAG    A+R LN +   G   N +
Sbjct: 336 GLCKAGNFDGAQRHLNYMNSLGFGSNLV 363


>ref|XP_007137425.1| hypothetical protein PHAVU_009G126100g [Phaseolus vulgaris]
           gi|561010512|gb|ESW09419.1| hypothetical protein
           PHAVU_009G126100g [Phaseolus vulgaris]
          Length = 498

 Score =  258 bits (659), Expect = 1e-66
 Identities = 128/215 (59%), Positives = 160/215 (74%)
 Frame = +3

Query: 6   KLSTLSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYS 185
           KLST  LNI +SL CK +QI KAE+ I + IR+G LP+ VTYNTLI  Y R    D AYS
Sbjct: 46  KLSTKLLNITISLLCKKKQISKAESVITDGIRIGVLPDAVTYNTLIDAYCRFASIDVAYS 105

Query: 186 ILHRIREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFF 365
           +L R+REAG+ P+VV+YNSL+S AVR  LLSK++DLF+EM+  G+ PD W++N LMHC F
Sbjct: 106 VLARMREAGIPPDVVSYNSLVSGAVRKCLLSKSIDLFEEMMASGVTPDAWSHNILMHCLF 165

Query: 366 KSGRPDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLV 545
           K G+P EANR+F + V+       TT+N MINGL K G   +A+ LFRNLQRHGF PQ++
Sbjct: 166 KLGKPYEANRVFKESVIRGEVHA-TTYNVMINGLCKNGYVSHALSLFRNLQRHGFVPQVL 224

Query: 546 TYNILINGLCKAGRLGEARRILNELGESGHVPNAI 650
           TYN LINGLCKA RL +AR++L E GESG+ PNAI
Sbjct: 225 TYNALINGLCKAKRLKDARKVLKEFGESGYEPNAI 259



 Score =  112 bits (281), Expect = 8e-23
 Identities = 62/208 (29%), Positives = 103/208 (49%)
 Frame = +3

Query: 27  NICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHRIRE 206
           N+ ++  CK+  +  A +   N  R G++P V+TYN LI    +      A  +L    E
Sbjct: 192 NVMINGLCKNGYVSHALSLFRNLQRHGFVPQVLTYNALINGLCKAKRLKDARKVLKEFGE 251

Query: 207 AGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGRPDE 386
           +G  PN +TY ++M C  R     + L++  EM   G   D + Y T++    K+GR  E
Sbjct: 252 SGYEPNAITYTTVMKCCFRCGYFEQGLEILSEMRNLGFTFDGFAYCTVIAAMIKTGRMRE 311

Query: 387 ANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNILIN 566
           A  I   +V + + P   ++NT+IN   + G   +A++L   ++  G      T+ I+++
Sbjct: 312 AEEIIEVMVSSGIRPDLVSYNTLINLYCRQGRLEDALKLLDEIEEEGLECDQYTHTIIVD 371

Query: 567 GLCKAGRLGEARRILNELGESGHVPNAI 650
           GLCKAG    A+R LN +   G   N +
Sbjct: 372 GLCKAGDFDGAQRHLNYMNTLGFGYNLV 399



 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 53/197 (26%), Positives = 102/197 (51%)
 Frame = +3

Query: 18  LSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHR 197
           L+ N  ++  CK++++  A   +      GY PN +TY T++    R   F+    IL  
Sbjct: 224 LTYNALINGLCKAKRLKDARKVLKEFGESGYEPNAITYTTVMKCCFRCGYFEQGLEILSE 283

Query: 198 IREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGR 377
           +R  G T +   Y ++++  ++   + +  ++ + M+  GI PD+ +YNTL++ + + GR
Sbjct: 284 MRNLGFTFDGFAYCTVIAAMIKTGRMREAEEIIEVMVSSGIRPDLVSYNTLINLYCRQGR 343

Query: 378 PDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNI 557
            ++A ++  +I    L   + T   +++GL KAG    A R    +   GF   LV +N 
Sbjct: 344 LEDALKLLDEIEEEGLECDQYTHTIIVDGLCKAGDFDGAQRHLNYMNTLGFGYNLVAFNC 403

Query: 558 LINGLCKAGRLGEARRI 608
           +++GL KAG +  A ++
Sbjct: 404 MLDGLGKAGHIDHALKL 420


>ref|XP_006833205.1| hypothetical protein AMTR_s00072p00167120 [Amborella trichopoda]
           gi|548837856|gb|ERM98483.1| hypothetical protein
           AMTR_s00072p00167120 [Amborella trichopoda]
          Length = 452

 Score =  257 bits (657), Expect = 2e-66
 Identities = 120/214 (56%), Positives = 166/214 (77%)
 Frame = +3

Query: 9   LSTLSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSI 188
           LST  LNIC+S FCK++ ++KAEA I++ IRLGYLP++VTYNTLI  Y R +G DAAYS+
Sbjct: 5   LSTRLLNICISSFCKARNLEKAEALIMDGIRLGYLPDIVTYNTLIAAYCRFLGVDAAYSV 64

Query: 189 LHRIREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFK 368
           L +++EAG+ P+V+TYN+L++CA +  L+S+TLDLF EML+  I PD W+YN+++HC+FK
Sbjct: 65  LDKMKEAGIHPDVITYNTLITCATKKKLISRTLDLFHEMLESEIVPDAWSYNSMIHCYFK 124

Query: 369 SGRPDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVT 548
           +GR D+A +I  ++   N+ P   T+NT+INGL KAG  G+A+RLFR L      P+L+T
Sbjct: 125 AGRSDDAYQIIQEMFSRNIAPTLATYNTIINGLCKAGDIGDALRLFRKLDVLCCPPELIT 184

Query: 549 YNILINGLCKAGRLGEARRILNELGESGHVPNAI 650
           YNILI+GLCK G++ EARR+L ELG  G+ PNAI
Sbjct: 185 YNILIDGLCKCGKVPEARRVLKELGILGYTPNAI 218



 Score = 89.7 bits (221), Expect = 7e-16
 Identities = 55/201 (27%), Positives = 97/201 (48%)
 Frame = +3

Query: 18  LSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHR 197
           ++ NI +   CK  ++ +A   +     LGY PN +TY T+I    R    +    +   
Sbjct: 183 ITYNILIDGLCKCGKVPEARRVLKELGILGYTPNAITYTTVITGCFRSGQANLGVELFSE 242

Query: 198 IREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGR 377
           ++  G   +   Y +++S   +  +  +     D+ML  G   D+ +YNT+M+ + K+G 
Sbjct: 243 MKHKGYNIDAFAYCTMISAFSKLGMTEEAYAYTDQMLGCGAPIDIVSYNTMMNSYCKAGD 302

Query: 378 PDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFSPQLVTYNI 557
              A R+ ++I        E T   +I+GL K G    A R FR ++  G    +V  N 
Sbjct: 303 LVSAFRLLNEIEDGGQKSDEYTHTILIDGLCKIGDVDAARRHFRYMETRGLGSSIVARNC 362

Query: 558 LINGLCKAGRLGEARRILNEL 620
           LI+GL KAG++  A ++ +E+
Sbjct: 363 LIHGLFKAGQVDLAIKLFSEM 383



 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 35/240 (14%)
 Frame = +3

Query: 18  LSLNICVSLFCKSQQIDKAEAAIINAIRLGYLPNVVTYNTLIPTYSRVVGFDAAYSILHR 197
           ++ N  ++   K + I +        +    +P+  +YN++I  Y +    D AY I+  
Sbjct: 78  ITYNTLITCATKKKLISRTLDLFHEMLESEIVPDAWSYNSMIHCYFKAGRSDDAYQIIQE 137

Query: 198 IREAGLTPNVVTYNSLMSCAVRYSLLSKTLDLFDEMLQWGIEPDVWTYNTLMHCFFKSGR 377
           +    + P + TYN++++   +   +   L LF ++      P++ TYN L+    K G+
Sbjct: 138 MFSRNIAPTLATYNTIINGLCKAGDIGDALRLFRKLDVLCCPPELITYNILIDGLCKCGK 197

Query: 378 PDEANRIFHDIVLNNLTPCETTFNTMINGLFKAGCTGNAIRLFRNLQRHGFS-------- 533
             EA R+  ++ +   TP   T+ T+I G F++G     + LF  ++  G++        
Sbjct: 198 VPEARRVLKELGILGYTPNAITYTTVITGCFRSGQANLGVELFSEMKHKGYNIDAFAYCT 257

Query: 534 ---------------------------PQLVTYNILINGLCKAGRLGEARRILNELGESG 632
                                        +V+YN ++N  CKAG L  A R+LNE+ + G
Sbjct: 258 MISAFSKLGMTEEAYAYTDQMLGCGAPIDIVSYNTMMNSYCKAGDLVSAFRLLNEIEDGG 317