BLASTX nr result

ID: Akebia22_contig00033382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00033382
         (332 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF81986.1| polyubiquitin [Glehnia littoralis]                     60   4e-07
gb|AAB95252.1| ubiquitin [Arabidopsis thaliana]                        59   5e-07
ref|XP_006306291.1| hypothetical protein CARUB_v10012156mg [Caps...    59   9e-07
ref|WP_010134170.1| ubiquitin [Flavobacteriaceae bacterium S85]        57   2e-06
ref|XP_005845753.1| ubiquitin, partial [Chlorella variabilis] gi...    57   3e-06
gb|AAT01911.1| 40S ribosomal protein S27A [Pseudopleuronectes am...    57   3e-06
ref|XP_002323462.2| polyubiquitin family protein, partial [Popul...    56   5e-06
ref|XP_006900560.1| PREDICTED: polyubiquitin-C-like [Elephantulu...    56   6e-06
gb|AHA46058.1| polyubiquitin [Insectomime virus] gi|566082468|gb...    56   6e-06
ref|XP_003935728.1| PREDICTED: polyubiquitin-B-like [Saimiri bol...    56   6e-06
ref|XP_003929446.1| PREDICTED: polyubiquitin-C-like, partial [Sa...    56   6e-06
ref|XP_003788227.1| PREDICTED: ubiquitin-40S ribosomal protein S...    56   6e-06
ref|XP_002267017.1| PREDICTED: polyubiquitin-C-like [Vitis vinif...    56   6e-06
ref|XP_006101651.1| PREDICTED: ubiquitin-40S ribosomal protein S...    55   8e-06

>dbj|BAF81986.1| polyubiquitin [Glehnia littoralis]
          Length = 141

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 26/37 (70%), Positives = 30/37 (81%)
 Frame = -1

Query: 332 QDMEGIHPDQQWLVFAGKSLESGHTLAYYNVQNNSTI 222
           QD EGI PDQQWL+FAGK LE+G TLA YN+Q  ST+
Sbjct: 55  QDKEGIPPDQQWLIFAGKQLEAGRTLADYNIQKESTL 91


>gb|AAB95252.1| ubiquitin [Arabidopsis thaliana]
          Length = 380

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = -1

Query: 332 QDMEGIHPDQQWLVFAGKSLESGHTLAYYNVQNNSTI 222
           QD EGI PDQQWL+FAGK LE G TLA YN+Q  ST+
Sbjct: 107 QDKEGIPPDQQWLIFAGKQLEDGRTLADYNIQKESTL 143


>ref|XP_006306291.1| hypothetical protein CARUB_v10012156mg [Capsella rubella]
           gi|482575002|gb|EOA39189.1| hypothetical protein
           CARUB_v10012156mg [Capsella rubella]
          Length = 460

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/37 (72%), Positives = 29/37 (78%)
 Frame = -1

Query: 332 QDMEGIHPDQQWLVFAGKSLESGHTLAYYNVQNNSTI 222
           QD EGIHPDQQ L FAGK LE GHTLA YN+Q  ST+
Sbjct: 413 QDKEGIHPDQQRLNFAGKQLEDGHTLADYNIQKESTL 449


>ref|WP_010134170.1| ubiquitin [Flavobacteriaceae bacterium S85]
          Length = 176

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = -1

Query: 332 QDMEGIHPDQQWLVFAGKSLESGHTLAYYNVQNNSTI 222
           QD EGIHPDQQ L+FAG+ LE+G TL+YYN+Q  S +
Sbjct: 50  QDKEGIHPDQQTLIFAGRELETGKTLSYYNIQKESIL 86


>ref|XP_005845753.1| ubiquitin, partial [Chlorella variabilis]
           gi|307105402|gb|EFN53651.1| ubiquitin, partial
           [Chlorella variabilis]
          Length = 76

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = -1

Query: 332 QDMEGIHPDQQWLVFAGKSLESGHTLAYYNVQNNSTI 222
           QD EGI PDQQ L+FAGK LE GHTLA YN+Q  ST+
Sbjct: 31  QDKEGIPPDQQRLIFAGKQLEDGHTLADYNIQKESTL 67


>gb|AAT01911.1| 40S ribosomal protein S27A [Pseudopleuronectes americanus]
          Length = 116

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/37 (67%), Positives = 29/37 (78%)
 Frame = -1

Query: 332 QDMEGIHPDQQWLVFAGKSLESGHTLAYYNVQNNSTI 222
           QD EGI PDQQ L+FAGK LE G TL+YYN+Q  ST+
Sbjct: 43  QDKEGIPPDQQRLIFAGKQLEDGRTLSYYNIQKESTL 79


>ref|XP_002323462.2| polyubiquitin family protein, partial [Populus trichocarpa]
           gi|550321147|gb|EEF05223.2| polyubiquitin family
           protein, partial [Populus trichocarpa]
          Length = 120

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = -1

Query: 332 QDMEGIHPDQQWLVFAGKSLESGHTLAYYNVQNNSTI 222
           QDMEGI PDQQ L+FAGK LE G TLA YN+Q  ST+
Sbjct: 4   QDMEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 40


>ref|XP_006900560.1| PREDICTED: polyubiquitin-C-like [Elephantulus edwardii]
          Length = 153

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/37 (67%), Positives = 29/37 (78%)
 Frame = -1

Query: 332 QDMEGIHPDQQWLVFAGKSLESGHTLAYYNVQNNSTI 222
           QD EGI PDQQ L+FAGK LE GHTL+ YN+Q  ST+
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGHTLSDYNIQKESTL 143


>gb|AHA46058.1| polyubiquitin [Insectomime virus] gi|566082468|gb|AHC54878.1|
           polyubiquitin [Tunisvirus fontaine2]
          Length = 74

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/37 (72%), Positives = 29/37 (78%)
 Frame = -1

Query: 332 QDMEGIHPDQQWLVFAGKSLESGHTLAYYNVQNNSTI 222
           QD EGI PDQQ L+FAGKSLE G TLA YNVQ  ST+
Sbjct: 31  QDKEGIPPDQQRLIFAGKSLEDGRTLADYNVQKESTL 67


>ref|XP_003935728.1| PREDICTED: polyubiquitin-B-like [Saimiri boliviensis boliviensis]
          Length = 165

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/37 (67%), Positives = 29/37 (78%)
 Frame = -1

Query: 332 QDMEGIHPDQQWLVFAGKSLESGHTLAYYNVQNNSTI 222
           QD EGI PDQQ L+FAGK LE GHTL+ YN+Q  ST+
Sbjct: 43  QDKEGIPPDQQRLIFAGKQLEDGHTLSDYNIQKESTL 79


>ref|XP_003929446.1| PREDICTED: polyubiquitin-C-like, partial [Saimiri boliviensis
           boliviensis]
          Length = 113

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/37 (67%), Positives = 29/37 (78%)
 Frame = -1

Query: 332 QDMEGIHPDQQWLVFAGKSLESGHTLAYYNVQNNSTI 222
           QD EGI PDQQ L+FAGK LE GHTL+ YN+Q  ST+
Sbjct: 31  QDKEGIPPDQQRLIFAGKQLEDGHTLSDYNIQKESTL 67


>ref|XP_003788227.1| PREDICTED: ubiquitin-40S ribosomal protein S27a-like isoform 1
           [Otolemur garnettii] gi|395830212|ref|XP_003788228.1|
           PREDICTED: ubiquitin-40S ribosomal protein S27a-like
           isoform 2 [Otolemur garnettii]
          Length = 155

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/37 (67%), Positives = 29/37 (78%)
 Frame = -1

Query: 332 QDMEGIHPDQQWLVFAGKSLESGHTLAYYNVQNNSTI 222
           QD EGI PDQQ L+FAGK LE GHTL+ YN+Q  ST+
Sbjct: 31  QDKEGIPPDQQRLIFAGKQLEDGHTLSDYNIQKESTL 67


>ref|XP_002267017.1| PREDICTED: polyubiquitin-C-like [Vitis vinifera]
          Length = 538

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/37 (67%), Positives = 29/37 (78%)
 Frame = -1

Query: 332 QDMEGIHPDQQWLVFAGKSLESGHTLAYYNVQNNSTI 222
           QD EGI PDQQ L+FAGK LE G TLA+YN+Q  ST+
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLAHYNIQKESTL 143


>ref|XP_006101651.1| PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Myotis
           lucifugus]
          Length = 155

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/37 (67%), Positives = 29/37 (78%)
 Frame = -1

Query: 332 QDMEGIHPDQQWLVFAGKSLESGHTLAYYNVQNNSTI 222
           QD EGI PDQQ L+FAGK LE G TL+YYN+Q  ST+
Sbjct: 31  QDKEGIPPDQQRLIFAGKQLEDGCTLSYYNIQKESTL 67


Top