BLASTX nr result

ID: Akebia22_contig00033268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00033268
         (611 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64116.1| hypothetical protein VITISV_041858 [Vitis vinifera]   129   5e-28
emb|CAN63189.1| hypothetical protein VITISV_005008 [Vitis vinifera]   118   2e-24
emb|CAN68155.1| hypothetical protein VITISV_040299 [Vitis vinifera]   105   8e-21
emb|CAN69142.1| hypothetical protein VITISV_039520 [Vitis vinifera]   101   1e-19
gb|ADJ18449.1| gag/pol protein [Bryonia dioica]                        96   6e-18
gb|ABA94768.1| transposon protein, putative, unclassified [Oryza...    96   8e-18
ref|XP_006494292.1| PREDICTED: G-type lectin S-receptor-like ser...    94   2e-17
gb|ABA94411.1| transposon protein, putative, unclassified [Oryza...    94   2e-17
emb|CAN63402.1| hypothetical protein VITISV_030427 [Vitis vinifera]    94   2e-17
gb|ABA97777.1| transposon protein, putative, unclassified [Oryza...    94   3e-17
emb|CAE02960.2| OSJNBb0050N09.11 [Oryza sativa Japonica Group]         94   3e-17
emb|CAE04259.3| OSJNBa0089N06.20 [Oryza sativa Japonica Group]         94   3e-17
emb|CAN61557.1| hypothetical protein VITISV_035097 [Vitis vinifera]    94   3e-17
emb|CAN62509.1| hypothetical protein VITISV_039839 [Vitis vinifera]    94   3e-17
gb|ABF96044.1| transposon protein, putative, unclassified [Oryza...    94   3e-17
gb|ABF94883.1| transposon protein, putative, unclassified [Oryza...    94   3e-17
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...    94   3e-17
gb|AAT69633.1| putative polyprotein [Oryza sativa Japonica Group]      94   3e-17
gb|AAM18738.1|AC092548_16 putative gag-pol polyprotein [Oryza sa...    94   4e-17
gb|AAP53325.2| retrotransposon protein, putative, Ty1-copia subc...    94   4e-17

>emb|CAN64116.1| hypothetical protein VITISV_041858 [Vitis vinifera]
          Length = 1471

 Score =  129 bits (325), Expect = 5e-28
 Identities = 68/143 (47%), Positives = 93/143 (65%), Gaps = 1/143 (0%)
 Frame = +2

Query: 2    RNKTLLDMVRSMMTQANL-ISF*GDVLLTVAYILNKVPSKSVTSTPYELWTSIKSVLGHL 178
            RN+ LL MVRSM+ Q+N  IS+ GD LLT +++LN+VPSK V+STPYELW   K   G+L
Sbjct: 1323 RNRILLHMVRSMVVQSNPPISYWGDALLTTSHVLNQVPSKFVSSTPYELWNXRKPNPGNL 1382

Query: 179  RPWGSSGFVHIPSHQIGKLDMRTKKCMFIKYYEHSKDFVFIYE*DNDSMVEIKS*DIHFI 358
            RPW S  +VH P H+  KL    +KC+ I+Y EHSK +V I E ++  + E+KS D+ F+
Sbjct: 1383 RPWRSVAYVHNPLHKYEKLGHXGRKCIXIRYSEHSKGYVLIGEHEDGIVTELKSRDVMFL 1442

Query: 359  ENDFPSRKKTQTSHEFYEIIKSN 427
            E +FP   +       YEI+  N
Sbjct: 1443 EGNFPRIGEIDRDLHLYEIMNPN 1465


>emb|CAN63189.1| hypothetical protein VITISV_005008 [Vitis vinifera]
          Length = 320

 Score =  118 bits (295), Expect = 2e-24
 Identities = 54/104 (51%), Positives = 76/104 (73%)
 Frame = +2

Query: 68  GDVLLTVAYILNKVPSKSVTSTPYELWTSIKSVLGHLRPWGSSGFVHIPSHQIGKLDMRT 247
           GD LLT  Y+LN+VP K++ STPYELW + K  L +LRPWGS+ ++HI SH+ GKL  R 
Sbjct: 109 GDALLTATYVLNQVPLKTIASTPYELWNNRKCDLSNLRPWGSAAYIHILSHKYGKLGPRG 168

Query: 248 KKCMFIKYYEHSKDFVFIYE*DNDSMVEIKS*DIHFIENDFPSR 379
           +KC+FI+Y EHSK +VFI E ++  + E++S D  F+E++F  R
Sbjct: 169 RKCIFIRYSEHSKGYVFIGEHEDGIVTELESRDATFLEDNFHVR 212


>emb|CAN68155.1| hypothetical protein VITISV_040299 [Vitis vinifera]
          Length = 323

 Score =  105 bits (263), Expect = 8e-21
 Identities = 54/122 (44%), Positives = 78/122 (63%)
 Frame = +2

Query: 68  GDVLLTVAYILNKVPSKSVTSTPYELWTSIKSVLGHLRPWGSSGFVHIPSHQIGKLDMRT 247
           GD LLT +++ N+VPSK V+ST YELW + K    +L+PW    +VH  SH+ GKL  R 
Sbjct: 198 GDALLTTSHVPNQVPSKFVSSTSYELWNNRKLDPSNLQPWKLVAYVHNSSHKYGKLAHRG 257

Query: 248 KKCMFIKYYEHSKDFVFIYE*DNDSMVEIKS*DIHFIENDFPSRKKTQTSHEFYEIIKSN 427
           +KC+FI+Y E+SK FVFI E ++ ++ E++S D+ F+E DF    +       YEI   N
Sbjct: 258 RKCIFIRYSEYSKGFVFIGEREDGTVTELESQDVTFLEGDFQRMGEIDRDLHLYEIF--N 315

Query: 428 PE 433
           P+
Sbjct: 316 PD 317


>emb|CAN69142.1| hypothetical protein VITISV_039520 [Vitis vinifera]
          Length = 687

 Score =  101 bits (252), Expect = 1e-19
 Identities = 62/138 (44%), Positives = 80/138 (57%), Gaps = 4/138 (2%)
 Frame = +2

Query: 2   RNKTLLDMVRSMMTQANLISF*-GDVLLTVAYILNKVPSKSVTSTPYELWTSIKSVLGHL 178
           RN+TL+DMVRSMM+ + L  F  G+ L T  YILN+VPSK++  TPYELW   KS L +L
Sbjct: 160 RNRTLIDMVRSMMSNSTLPEFLWGEALKTAVYILNRVPSKAIPKTPYELWVGRKSTLNYL 219

Query: 179 RPWGSSGFVHIPSHQIGKLDMRTKKCMFIKYYEHSKDFVFIYE*DNDSMVEIKS*DIHFI 358
             WG      I + QI KLD +T  C FI Y E SK F F        +VE +     F+
Sbjct: 220 HVWGCLAEAKIFNPQIKKLDSKTISCNFIGYPERSKGFRFYCHGQGPKIVETR--HAVFL 277

Query: 359 ENDFPSRK---KTQTSHE 403
           EN++ S +   K  TS+E
Sbjct: 278 ENEYFSGRTELKKLTSNE 295


>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
          Length = 1292

 Score = 96.3 bits (238), Expect = 6e-18
 Identities = 61/164 (37%), Positives = 90/164 (54%), Gaps = 1/164 (0%)
 Frame = +2

Query: 2    RNKTLLDMVRSMMTQANLI-SF*GDVLLTVAYILNKVPSKSVTSTPYELWTSIKSVLGHL 178
            RN+TLLDMVRSMM+ A L  SF G  L T  +ILN VPSKSV  TPYELW   KS L + 
Sbjct: 608  RNRTLLDMVRSMMSYAQLPDSFWGYALETAIHILNNVPSKSVLETPYELWKGRKSSLRYF 667

Query: 179  RPWGSSGFVHIPSHQIGKLDMRTKKCMFIKYYEHSKDFVFIYE*DNDSMVEIKS*DIHFI 358
            R WG    V + + +  KL+ R+K C+F+ Y + S+  +F +  +N   V   S +  F+
Sbjct: 668  RIWGCPAHVLVQNPK--KLEPRSKLCLFVGYPKESRGGLFYHPQENKVFV---STNATFL 722

Query: 359  ENDFPSRKKTQTSHEFYEIIKSNPESGEGPPLILDKGGVTKPSN 490
            E D     + ++     E+ K+  +       ++DK  ++  S+
Sbjct: 723  EEDHXRNHQPRSKIVLKEMFKNATDKPSSSTKVVDKANISDQSH 766


>gb|ABA94768.1| transposon protein, putative, unclassified [Oryza sativa Japonica
           Group]
          Length = 1144

 Score = 95.9 bits (237), Expect = 8e-18
 Identities = 53/113 (46%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
 Frame = +2

Query: 2   RNKTLLDMVRSMMTQANL-ISF*GDVLLTVAYILNKVPSKSVTSTPYELWTSIKSVLGHL 178
           RN+TL+DMVRSMM+ + L +    + L T  +ILN++PSKSV  TPYELWT     L HL
Sbjct: 507 RNRTLMDMVRSMMSYSTLPLGLWMEALKTTIHILNRIPSKSVPKTPYELWTGRVPSLAHL 566

Query: 179 RPWGSSGFVHIPSHQIGKLDMRTKKCMFIKYYEHSKDFVFIYE*DNDSMVEIK 337
           R WGSS    + +  IGKLD +T  C FI Y E SK + F         VE++
Sbjct: 567 RVWGSSAEAKVFNPNIGKLDPKTVGCHFIGYPERSKGYRFYCPNSYTKFVEMR 619


>ref|XP_006494292.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
           kinase RLK1-like, partial [Citrus sinensis]
          Length = 1304

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 56/139 (40%), Positives = 80/139 (57%), Gaps = 5/139 (3%)
 Frame = +2

Query: 2   RNKTLLDMVRSMMTQANL-ISF*GDVLLTVAYILNKVPSKSVTSTPYELWTSIKSVLGHL 178
           +N+TL++MV +M+    L   F G+ +LT  +ILN+VP+K    TPYELW   K  L +L
Sbjct: 82  KNRTLIEMVNAMLFNTGLGKGFWGEAILTACHILNRVPNKKTKVTPYELWKKKKPNLSYL 141

Query: 179 RPWGSSGFVHIPSHQIGKLDMRTKKCMFIKYYEHSKDFVFIYE*DNDSMVEI----KS*D 346
           R WG    V +P  +I KL  R  +C+F+ Y EHSK + F+   + +S VEI    +S D
Sbjct: 142 RVWGCRAIVRLPEPKIKKLGERGIECIFLGYAEHSKAYRFLVT-EPNSFVEINTIVESRD 200

Query: 347 IHFIENDFPSRKKTQTSHE 403
             F EN F +  K+  S E
Sbjct: 201 AIFYENRFSTIPKSIDSQE 219


>gb|ABA94411.1| transposon protein, putative, unclassified [Oryza sativa Japonica
           Group]
          Length = 1171

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 50/100 (50%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
 Frame = +2

Query: 2   RNKTLLDMVRSMMTQANL-ISF*GDVLLTVAYILNKVPSKSVTSTPYELWTSIKSVLGHL 178
           RN+TL+DMVRSMM+ + L +    + L T  +ILN+VPSKSV  TPYELWT     + HL
Sbjct: 428 RNRTLMDMVRSMMSYSTLPLGLWMEALKTAIHILNRVPSKSVPKTPYELWTGSVPSIAHL 487

Query: 179 RPWGSSGFVHIPSHQIGKLDMRTKKCMFIKYYEHSKDFVF 298
           R WGS     + +  IGKLD +T  C FI Y E SK + F
Sbjct: 488 RVWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRF 527


>emb|CAN63402.1| hypothetical protein VITISV_030427 [Vitis vinifera]
          Length = 1403

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 63/162 (38%), Positives = 83/162 (51%), Gaps = 8/162 (4%)
 Frame = +2

Query: 2    RNKTLLDMVRSMMTQANLI-SF*GDVLLTVAYILNKVPSKSVTSTPYELWTSIKSVLGHL 178
            RN+TL DMVRSM++ + L+ S  G+ + T  YILN+VPSK+V  TPYELWTS K  + HL
Sbjct: 747  RNRTLKDMVRSMISHSTLLESLWGEAIKTAVYILNRVPSKAVAKTPYELWTSKKPSIRHL 806

Query: 179  RPWGSSGFVHIPSHQIGKLDMRTKKCMFIKYYEHSKDFVF-------IYE*DNDSMVEIK 337
              WG             KLD RT  C F+ Y E S+ F F        +E  N   +E  
Sbjct: 807  HVWGCPTEARPYKPNEKKLDSRTMSCYFVGYSERSRGFKFYDPSTRSFFETGNAKFIE-- 864

Query: 338  S*DIHFIENDFPSRKKTQTSHEFYEIIKSNPESGEGPPLILD 463
              D+   E + P RK  Q   E    I+  PE    PP +++
Sbjct: 865  --DVELSERE-PLRKSVQPIIE----IEDTPEI---PPTVME 896


>gb|ABA97777.1| transposon protein, putative, unclassified [Oryza sativa Japonica
           Group]
          Length = 1378

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 51/100 (51%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
 Frame = +2

Query: 2   RNKTLLDMVRSMMTQANL-ISF*GDVLLTVAYILNKVPSKSVTSTPYELWTSIKSVLGHL 178
           RN+TL+DMVRSMM+ + L +    + L T  +ILN+VPSKSV  TPYELWT     L HL
Sbjct: 616 RNRTLMDMVRSMMSYSTLPLGLWMEALKTAIHILNRVPSKSVPKTPYELWTGRVPSLTHL 675

Query: 179 RPWGSSGFVHIPSHQIGKLDMRTKKCMFIKYYEHSKDFVF 298
           R WGS     + +  IGKLD +T  C FI Y E SK + F
Sbjct: 676 RVWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRF 715


>emb|CAE02960.2| OSJNBb0050N09.11 [Oryza sativa Japonica Group]
          Length = 1405

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 51/100 (51%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
 Frame = +2

Query: 2   RNKTLLDMVRSMMTQANL-ISF*GDVLLTVAYILNKVPSKSVTSTPYELWTSIKSVLGHL 178
           RN+TL+DMVRSMM+ + L +    + L T  +ILN+VPSKSV  TPYELWT     L HL
Sbjct: 630 RNRTLMDMVRSMMSYSTLPLGLWMEALKTAIHILNRVPSKSVPKTPYELWTGRVPSLTHL 689

Query: 179 RPWGSSGFVHIPSHQIGKLDMRTKKCMFIKYYEHSKDFVF 298
           R WGS     + +  IGKLD +T  C FI Y E SK + F
Sbjct: 690 RVWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRF 729


>emb|CAE04259.3| OSJNBa0089N06.20 [Oryza sativa Japonica Group]
          Length = 1405

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 51/100 (51%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
 Frame = +2

Query: 2   RNKTLLDMVRSMMTQANL-ISF*GDVLLTVAYILNKVPSKSVTSTPYELWTSIKSVLGHL 178
           RN+TL+DMVRSMM+ + L +    + L T  +ILN+VPSKSV  TPYELWT     L HL
Sbjct: 630 RNRTLMDMVRSMMSYSTLPLGLWMEALKTAIHILNRVPSKSVPKTPYELWTGRVPSLTHL 689

Query: 179 RPWGSSGFVHIPSHQIGKLDMRTKKCMFIKYYEHSKDFVF 298
           R WGS     + +  IGKLD +T  C FI Y E SK + F
Sbjct: 690 RVWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRF 729


>emb|CAN61557.1| hypothetical protein VITISV_035097 [Vitis vinifera]
          Length = 423

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 48/100 (48%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
 Frame = +2

Query: 2   RNKTLLDMVRSMMTQANLI-SF*GDVLLTVAYILNKVPSKSVTSTPYELWTSIKSVLGHL 178
           RN+TL DMVRSM++ + ++ S  G+ + T  YILN+VPSK+V  TPYELWTS K  + HL
Sbjct: 14  RNRTLKDMVRSMISHSTJLESXWGEAIKTTVYILNRVPSKTVAKTPYELWTSKKPSIRHL 73

Query: 179 RPWGSSGFVHIPSHQIGKLDMRTKKCMFIKYYEHSKDFVF 298
             WG             KLD RT  C F+ YYE S+ F F
Sbjct: 74  HVWGCPAEARPYKPNEKKLDSRTVSCYFVGYYERSRGFKF 113


>emb|CAN62509.1| hypothetical protein VITISV_039839 [Vitis vinifera]
          Length = 1154

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 59/138 (42%), Positives = 77/138 (55%), Gaps = 4/138 (2%)
 Frame = +2

Query: 2   RNKTLLDMVRSMMTQANLISF*-GDVLLTVAYILNKVPSKSVTSTPYELWTSIKSVLGHL 178
           RN TL+DMVRSMM+ + L  F  G+ L T  +ILN+VPSK++  TPYELW   K  L +L
Sbjct: 160 RNCTLIDMVRSMMSNSTLPEFLWGEALKTAVHILNRVPSKAIPKTPYELWVGRKPTLNYL 219

Query: 179 RPWGSSGFVHIPSHQIGKLDMRTKKCMFIKYYEHSKDFVFIYE*DNDSMVEIKS*DIHFI 358
             WG      I + QI KLD +T  C FI Y E S  F F        +VE +     F+
Sbjct: 220 HVWGCPVEAKIFNPQIKKLDSKTISCNFISYPERSNGFRFYCHGQGPKIVETR--HAVFL 277

Query: 359 ENDFPSRK---KTQTSHE 403
           EN++ S +   K  TS+E
Sbjct: 278 ENEYFSGRIELKKLTSNE 295


>gb|ABF96044.1| transposon protein, putative, unclassified [Oryza sativa Japonica
           Group]
          Length = 1395

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 51/100 (51%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
 Frame = +2

Query: 2   RNKTLLDMVRSMMTQANL-ISF*GDVLLTVAYILNKVPSKSVTSTPYELWTSIKSVLGHL 178
           RN+TL+DMVRSMM+ + L +    + L T  +ILN+VPSKSV  TPYELWT     L HL
Sbjct: 620 RNRTLMDMVRSMMSYSTLPLGLWMEALKTAIHILNRVPSKSVPKTPYELWTGRVPSLTHL 679

Query: 179 RPWGSSGFVHIPSHQIGKLDMRTKKCMFIKYYEHSKDFVF 298
           R WGS     + +  IGKLD +T  C FI Y E SK + F
Sbjct: 680 RVWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRF 719


>gb|ABF94883.1| transposon protein, putative, unclassified [Oryza sativa Japonica
           Group]
          Length = 1390

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 51/100 (51%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
 Frame = +2

Query: 2   RNKTLLDMVRSMMTQANL-ISF*GDVLLTVAYILNKVPSKSVTSTPYELWTSIKSVLGHL 178
           RN+TL+DMVRSMM+ + L +    + L T  +ILN+VPSKSV  TPYELWT     L HL
Sbjct: 625 RNRTLMDMVRSMMSYSTLPLGLWMEALKTAIHILNRVPSKSVPKTPYELWTGRVPSLTHL 684

Query: 179 RPWGSSGFVHIPSHQIGKLDMRTKKCMFIKYYEHSKDFVF 298
           R WGS     + +  IGKLD +T  C FI Y E SK + F
Sbjct: 685 RVWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRF 724


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
           gi|62701883|gb|AAX92956.1| retrotransposon protein,
           putative, Ty1-copia sub-class [Oryza sativa Japonica
           Group] gi|108864259|gb|ABA92827.2| retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1184

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 56/128 (43%), Positives = 75/128 (58%), Gaps = 1/128 (0%)
 Frame = +2

Query: 2   RNKTLLDMVRSMMTQANLI-SF*GDVLLTVAYILNKVPSKSVTSTPYELWTSIKSVLGHL 178
           RN+TLLDMVRSMM+Q NL+ SF G  L T A+ LN VPSKSV  TPYE+WT  +  L  L
Sbjct: 579 RNRTLLDMVRSMMSQTNLLLSFWGYALETTAFTLNSVPSKSVDKTPYEIWTGKRPSLSFL 638

Query: 179 RPWGSSGFVHIPSHQIGKLDMRTKKCMFIKYYEHSKDFVFIYE*DNDSMVEIKS*DIHFI 358
           + WG    V++   Q  KL  ++ KC F+ Y + +K + F  + +    V        F+
Sbjct: 639 KIWGCE--VYVKRLQSDKLTPKSDKCFFVGYPKETKGYYFYNQEEGKVFVARHG---VFL 693

Query: 359 ENDFPSRK 382
           E +F SRK
Sbjct: 694 EKEFISRK 701


>gb|AAT69633.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1358

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 51/100 (51%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
 Frame = +2

Query: 2   RNKTLLDMVRSMMTQANL-ISF*GDVLLTVAYILNKVPSKSVTSTPYELWTSIKSVLGHL 178
           RN+TL+DMVRSMM+ + L +    + L T  +ILN+VPSKSV  TPYELWT     L HL
Sbjct: 583 RNRTLMDMVRSMMSYSTLPLGLWMEALKTAIHILNRVPSKSVPKTPYELWTGRVPSLTHL 642

Query: 179 RPWGSSGFVHIPSHQIGKLDMRTKKCMFIKYYEHSKDFVF 298
           R WGS     + +  IGKLD +T  C FI Y E SK + F
Sbjct: 643 RVWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRF 682


>gb|AAM18738.1|AC092548_16 putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1787

 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 50/100 (50%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
 Frame = +2

Query: 2   RNKTLLDMVRSMMTQANL-ISF*GDVLLTVAYILNKVPSKSVTSTPYELWTSIKSVLGHL 178
           RN+TL+DMVRSMM+ + L +    + L T  +ILN+VPSKS+  TPYELWT     L HL
Sbjct: 505 RNRTLMDMVRSMMSYSTLPLGLWMEALKTAIHILNRVPSKSMPKTPYELWTGRVPSLAHL 564

Query: 179 RPWGSSGFVHIPSHQIGKLDMRTKKCMFIKYYEHSKDFVF 298
           R WGS     + +  IGKLD +T  C FI Y E SK + F
Sbjct: 565 RVWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRF 604


>gb|AAP53325.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1884

 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 50/100 (50%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
 Frame = +2

Query: 2   RNKTLLDMVRSMMTQANL-ISF*GDVLLTVAYILNKVPSKSVTSTPYELWTSIKSVLGHL 178
           RN+TL+DMVRSMM+ + L +    + L T  +ILN+VPSKS+  TPYELWT     L HL
Sbjct: 505 RNRTLMDMVRSMMSYSTLPLGLWMEALKTAIHILNRVPSKSMPKTPYELWTGRVPSLAHL 564

Query: 179 RPWGSSGFVHIPSHQIGKLDMRTKKCMFIKYYEHSKDFVF 298
           R WGS     + +  IGKLD +T  C FI Y E SK + F
Sbjct: 565 RVWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRF 604


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