BLASTX nr result

ID: Akebia22_contig00033207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00033207
         (339 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006494311.1| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08
ref|XP_002514235.1| pentatricopeptide repeat-containing protein,...    62   1e-07
ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containi...    60   4e-07
ref|XP_006451265.1| hypothetical protein CICLE_v10008215mg [Citr...    59   9e-07

>ref|XP_006494311.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77170-like [Citrus sinensis]
          Length = 471

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 7/66 (10%)
 Frame = +1

Query: 160 RSTSTH-YPPHITLS------DSDQNPAQIIGTHLSKCTNLSDLNQIYAHIIKTCILELR 318
           R   TH +  H+T+S      D+ ++PA+I+ T LSKCTNL  LNQIYAHII+T +L   
Sbjct: 24  RLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSY 83

Query: 319 PSAFHW 336
            +AFHW
Sbjct: 84  SAAFHW 89


>ref|XP_002514235.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546691|gb|EEF48189.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 352

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 43/99 (43%), Positives = 53/99 (53%)
 Frame = +1

Query: 40  MISFHHLFVKVSVRTKRSNCLSLMVTQHLNHKLNLHFEAQRSTSTHYPPHITLSDSDQNP 219
           M S HHLF+ +  R K S   +L ++ HLNH L   F A     T  PP   L  S Q+ 
Sbjct: 1   MNSLHHLFL-LGFR-KSSTFKNLTISCHLNHSLAF-FSASSDAQT--PP---LPQSAQDI 52

Query: 220 AQIIGTHLSKCTNLSDLNQIYAHIIKTCILELRPSAFHW 336
           A+   T  S CT L DLNQIYAHII + +L    + FHW
Sbjct: 53  AKWAATQSSNCTTLRDLNQIYAHIICSDLLHFYSAPFHW 91


>ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
           [Vitis vinifera] gi|297738768|emb|CBI28013.3| unnamed
           protein product [Vitis vinifera]
          Length = 479

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
 Frame = +1

Query: 40  MISFHHLFVKVS-VRTKRSNCLSLMVTQHL---NHKLNLHFEAQRSTSTHYPPHITLSDS 207
           M SF    +++S V+  +   +S  +  +L    H ++  F  Q    T +PP     D 
Sbjct: 1   MTSFQPPLLRLSIVQIPKPQTISRHLCNYLATTTHSVDAQFNFQ---PTAHPPS---PDP 54

Query: 208 DQNPAQIIGTHLSKCTNLSDLNQIYAHIIKTCILELRPSAFHW 336
            Q+ AQ I +HLSKC NL +LNQ+ AHII+T  LEL P+ F W
Sbjct: 55  IQDTAQTIASHLSKCANLIELNQLLAHIIRTHFLELYPAPFQW 97


>ref|XP_006451265.1| hypothetical protein CICLE_v10008215mg [Citrus clementina]
           gi|557554491|gb|ESR64505.1| hypothetical protein
           CICLE_v10008215mg [Citrus clementina]
          Length = 461

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 26/41 (63%), Positives = 32/41 (78%)
 Frame = +1

Query: 214 NPAQIIGTHLSKCTNLSDLNQIYAHIIKTCILELRPSAFHW 336
           +PA+I+ T LSKCTNL  LNQIYAHII+T +L    +AFHW
Sbjct: 39  HPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHW 79


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