BLASTX nr result
ID: Akebia22_contig00032337
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia22_contig00032337
(630 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AHA12831.1| RNA polymerase beta subunit [Maranta leuconeura] 77 8e-17
gb|AFB18324.1| RNA polymerase beta subunit, partial [Belosynapsi... 75 3e-16
ref|YP_007475611.1| RNA polymerase beta subunit [Heliconia colli... 75 3e-16
gb|AFB18350.1| RNA polymerase beta subunit, partial [Potarophytu... 73 3e-16
ref|YP_008854586.1| RNA polymerase beta subunit [Curcuma roscoea... 75 3e-16
gb|AGE93448.1| RNA polymerase beta subunit [Xiphidium caeruleum] 75 3e-16
gb|AFB18352.1| RNA polymerase beta subunit, partial [Renealmia a... 75 3e-16
gb|AHA12747.1| RNA polymerase beta subunit [Canna indica] 75 3e-16
ref|YP_007475696.1| RNA polymerase beta subunit [Zingiber specta... 75 3e-16
ref|YP_008854417.1| RNA polymerase beta subunit [Musa textilis] ... 75 3e-16
emb|CCW72367.1| rpoB (chloroplast) [Musa acuminata subsp. malacc... 75 3e-16
gb|AGE93362.1| RNA polymerase beta subunit [Alpinia zerumbet] 75 3e-16
gb|AHA13174.1| RNA polymerase beta subunit [Thaumatococcus danie... 75 3e-16
gb|ABU85436.1| RNA polymerase beta subunit [Musa acuminata] 75 3e-16
gb|AEX94350.1| RNA polymerase beta subunit (chloroplast) [Ledebo... 73 3e-16
gb|AEX94348.1| RNA polymerase beta subunit (chloroplast) [Bowiea... 73 3e-16
gb|AFB18357.1| RNA polymerase beta subunit, partial [Tradescanti... 75 4e-16
gb|AFB18337.1| RNA polymerase beta subunit, partial [Hosta ventr... 74 5e-16
gb|AFB18336.1| RNA polymerase beta subunit, partial [Hesperaloe ... 74 5e-16
ref|YP_004769622.1| RNA polymerase beta subunit (chloroplast) [S... 74 5e-16
>gb|AHA12831.1| RNA polymerase beta subunit [Maranta leuconeura]
Length = 1070
Score = 77.0 bits (188), Expect(2) = 8e-17
Identities = 36/51 (70%), Positives = 41/51 (80%)
Frame = +3
Query: 477 KNKIFDGRTGNPFELPAIIGKLYIQK*IYQVVDIIHGRFRGHYTLVTQSPI 629
K++IFDGRTGNPFE P +IGK YI K I+QV D IHGR GHYTLVTQ P+
Sbjct: 924 KSRIFDGRTGNPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYTLVTQQPL 974
Score = 36.2 bits (82), Expect(2) = 8e-17
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 374 QDRNKRFREN*LYETNKQTKNPWVFESE 457
Q+ +++ + LYE +KQTKNPWVFE E
Sbjct: 893 QEASRKLVFSELYEASKQTKNPWVFEPE 920
>gb|AFB18324.1| RNA polymerase beta subunit, partial [Belosynapsis ciliata]
Length = 1085
Score = 75.1 bits (183), Expect(2) = 3e-16
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +3
Query: 477 KNKIFDGRTGNPFELPAIIGKLYIQK*IYQVVDIIHGRFRGHYTLVTQSPI 629
K++IFDGRTGNPFE P +IGK YI K I+QV D IHGR GHY LVTQ P+
Sbjct: 939 KSRIFDGRTGNPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPL 989
Score = 36.2 bits (82), Expect(2) = 3e-16
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 374 QDRNKRFREN*LYETNKQTKNPWVFESE 457
Q+ +++ + LYE +KQTKNPWVFE E
Sbjct: 908 QEASRKLVFSQLYEASKQTKNPWVFEPE 935
>ref|YP_007475611.1| RNA polymerase beta subunit [Heliconia collinsiana]
gi|449326090|gb|AGE92676.1| RNA polymerase beta subunit
[Heliconia collinsiana]
Length = 1083
Score = 75.1 bits (183), Expect(2) = 3e-16
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +3
Query: 477 KNKIFDGRTGNPFELPAIIGKLYIQK*IYQVVDIIHGRFRGHYTLVTQSPI 629
K++IFDGRTGNPFE P +IGK YI K I+QV D IHGR GHY LVTQ P+
Sbjct: 937 KSRIFDGRTGNPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPL 987
Score = 36.2 bits (82), Expect(2) = 3e-16
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 374 QDRNKRFREN*LYETNKQTKNPWVFESE 457
Q+ +++ + LYE +KQTKNPWVFE E
Sbjct: 906 QEASRKLVFSELYEASKQTKNPWVFEPE 933
>gb|AFB18350.1| RNA polymerase beta subunit, partial [Potarophytum riparium]
Length = 1083
Score = 73.2 bits (178), Expect(2) = 3e-16
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = +3
Query: 477 KNKIFDGRTGNPFELPAIIGKLYIQK*IYQVVDIIHGRFRGHYTLVTQSPI 629
K++IFDGRTG+PFE P +IGK YI K I+QV D IHGR GHY LVTQ P+
Sbjct: 937 KSRIFDGRTGDPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPL 987
Score = 38.1 bits (87), Expect(2) = 3e-16
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +2
Query: 374 QDRNKRFREN*LYETNKQTKNPWVFESE 457
Q+ +++ + LYE +KQTKNPWVFESE
Sbjct: 906 QEASRKLVFSELYEASKQTKNPWVFESE 933
>ref|YP_008854586.1| RNA polymerase beta subunit [Curcuma roscoeana]
gi|557637493|gb|AHA13088.1| RNA polymerase beta subunit
[Curcuma roscoeana]
Length = 1082
Score = 75.1 bits (183), Expect(2) = 3e-16
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +3
Query: 477 KNKIFDGRTGNPFELPAIIGKLYIQK*IYQVVDIIHGRFRGHYTLVTQSPI 629
K++IFDGRTGNPFE P +IGK YI K I+QV D IHGR GHY LVTQ P+
Sbjct: 936 KSRIFDGRTGNPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPL 986
Score = 36.2 bits (82), Expect(2) = 3e-16
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 374 QDRNKRFREN*LYETNKQTKNPWVFESE 457
Q+ +++ + LYE +KQTKNPWVFE E
Sbjct: 905 QEASRKLVFSELYEASKQTKNPWVFEPE 932
>gb|AGE93448.1| RNA polymerase beta subunit [Xiphidium caeruleum]
Length = 1080
Score = 75.1 bits (183), Expect(2) = 3e-16
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +3
Query: 477 KNKIFDGRTGNPFELPAIIGKLYIQK*IYQVVDIIHGRFRGHYTLVTQSPI 629
K++IFDGRTGNPFE P +IGK YI K I+QV D IHGR GHY LVTQ P+
Sbjct: 934 KSRIFDGRTGNPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPL 984
Score = 36.2 bits (82), Expect(2) = 3e-16
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 374 QDRNKRFREN*LYETNKQTKNPWVFESE 457
Q+ +++ + LYE +KQTKNPWVFE E
Sbjct: 903 QEASRKLVFSELYEASKQTKNPWVFEPE 930
>gb|AFB18352.1| RNA polymerase beta subunit, partial [Renealmia alpinia]
Length = 1078
Score = 75.1 bits (183), Expect(2) = 3e-16
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +3
Query: 477 KNKIFDGRTGNPFELPAIIGKLYIQK*IYQVVDIIHGRFRGHYTLVTQSPI 629
K++IFDGRTGNPFE P +IGK YI K I+QV D IHGR GHY LVTQ P+
Sbjct: 932 KSRIFDGRTGNPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPL 982
Score = 36.2 bits (82), Expect(2) = 3e-16
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 374 QDRNKRFREN*LYETNKQTKNPWVFESE 457
Q+ +++ + LYE +KQTKNPWVFE E
Sbjct: 901 QEASRKLVFSELYEASKQTKNPWVFEPE 928
>gb|AHA12747.1| RNA polymerase beta subunit [Canna indica]
Length = 1076
Score = 75.1 bits (183), Expect(2) = 3e-16
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +3
Query: 477 KNKIFDGRTGNPFELPAIIGKLYIQK*IYQVVDIIHGRFRGHYTLVTQSPI 629
K++IFDGRTGNPFE P +IGK YI K I+QV D IHGR GHY LVTQ P+
Sbjct: 930 KSRIFDGRTGNPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPL 980
Score = 36.2 bits (82), Expect(2) = 3e-16
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 374 QDRNKRFREN*LYETNKQTKNPWVFESE 457
Q+ +++ + LYE +KQTKNPWVFE E
Sbjct: 899 QEASRKLVFSELYEASKQTKNPWVFEPE 926
>ref|YP_007475696.1| RNA polymerase beta subunit [Zingiber spectabile]
gi|449326176|gb|AGE92761.1| RNA polymerase beta subunit
[Zingiber spectabile]
Length = 1075
Score = 75.1 bits (183), Expect(2) = 3e-16
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +3
Query: 477 KNKIFDGRTGNPFELPAIIGKLYIQK*IYQVVDIIHGRFRGHYTLVTQSPI 629
K++IFDGRTGNPFE P +IGK YI K I+QV D IHGR GHY LVTQ P+
Sbjct: 929 KSRIFDGRTGNPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPL 979
Score = 36.2 bits (82), Expect(2) = 3e-16
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 374 QDRNKRFREN*LYETNKQTKNPWVFESE 457
Q+ +++ + LYE +KQTKNPWVFE E
Sbjct: 898 QEASRKLVFSELYEASKQTKNPWVFEPE 925
>ref|YP_008854417.1| RNA polymerase beta subunit [Musa textilis]
gi|557636904|gb|AHA12506.1| RNA polymerase beta subunit
[Musa textilis]
Length = 1074
Score = 75.1 bits (183), Expect(2) = 3e-16
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +3
Query: 477 KNKIFDGRTGNPFELPAIIGKLYIQK*IYQVVDIIHGRFRGHYTLVTQSPI 629
K++IFDGRTGNPFE P +IGK YI K I+QV D IHGR GHY LVTQ P+
Sbjct: 928 KSRIFDGRTGNPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPL 978
Score = 36.2 bits (82), Expect(2) = 3e-16
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 374 QDRNKRFREN*LYETNKQTKNPWVFESE 457
Q+ +++ + LYE +KQTKNPWVFE E
Sbjct: 897 QEASRKLVFSELYEASKQTKNPWVFEPE 924
>emb|CCW72367.1| rpoB (chloroplast) [Musa acuminata subsp. malaccensis]
Length = 1074
Score = 75.1 bits (183), Expect(2) = 3e-16
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +3
Query: 477 KNKIFDGRTGNPFELPAIIGKLYIQK*IYQVVDIIHGRFRGHYTLVTQSPI 629
K++IFDGRTGNPFE P +IGK YI K I+QV D IHGR GHY LVTQ P+
Sbjct: 928 KSRIFDGRTGNPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPL 978
Score = 36.2 bits (82), Expect(2) = 3e-16
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 374 QDRNKRFREN*LYETNKQTKNPWVFESE 457
Q+ +++ + LYE +KQTKNPWVFE E
Sbjct: 897 QEASRKLVFSELYEASKQTKNPWVFEPE 924
>gb|AGE93362.1| RNA polymerase beta subunit [Alpinia zerumbet]
Length = 1073
Score = 75.1 bits (183), Expect(2) = 3e-16
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +3
Query: 477 KNKIFDGRTGNPFELPAIIGKLYIQK*IYQVVDIIHGRFRGHYTLVTQSPI 629
K++IFDGRTGNPFE P +IGK YI K I+QV D IHGR GHY LVTQ P+
Sbjct: 927 KSRIFDGRTGNPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPL 977
Score = 36.2 bits (82), Expect(2) = 3e-16
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 374 QDRNKRFREN*LYETNKQTKNPWVFESE 457
Q+ +++ + LYE +KQTKNPWVFE E
Sbjct: 896 QEASRKLVFSELYEASKQTKNPWVFEPE 923
>gb|AHA13174.1| RNA polymerase beta subunit [Thaumatococcus daniellii]
Length = 1070
Score = 75.1 bits (183), Expect(2) = 3e-16
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +3
Query: 477 KNKIFDGRTGNPFELPAIIGKLYIQK*IYQVVDIIHGRFRGHYTLVTQSPI 629
K++IFDGRTGNPFE P +IGK YI K I+QV D IHGR GHY LVTQ P+
Sbjct: 924 KSRIFDGRTGNPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPL 974
Score = 36.2 bits (82), Expect(2) = 3e-16
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 374 QDRNKRFREN*LYETNKQTKNPWVFESE 457
Q+ +++ + LYE +KQTKNPWVFE E
Sbjct: 893 QEASRKLVFSELYEASKQTKNPWVFEPE 920
>gb|ABU85436.1| RNA polymerase beta subunit [Musa acuminata]
Length = 1070
Score = 75.1 bits (183), Expect(2) = 3e-16
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +3
Query: 477 KNKIFDGRTGNPFELPAIIGKLYIQK*IYQVVDIIHGRFRGHYTLVTQSPI 629
K++IFDGRTGNPFE P +IGK YI K I+QV D IHGR GHY LVTQ P+
Sbjct: 924 KSRIFDGRTGNPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPL 974
Score = 36.2 bits (82), Expect(2) = 3e-16
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 374 QDRNKRFREN*LYETNKQTKNPWVFESE 457
Q+ +++ + LYE +KQTKNPWVFE E
Sbjct: 893 QEASRKLVFSELYEASKQTKNPWVFEPE 920
>gb|AEX94350.1| RNA polymerase beta subunit (chloroplast) [Ledebouria cordifolia]
Length = 1070
Score = 73.2 bits (178), Expect(2) = 3e-16
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = +3
Query: 477 KNKIFDGRTGNPFELPAIIGKLYIQK*IYQVVDIIHGRFRGHYTLVTQSPI 629
K++IFDGRTG+PFE P +IGK YI K I+QV D IHGR GHY LVTQ P+
Sbjct: 924 KSRIFDGRTGDPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPL 974
Score = 38.1 bits (87), Expect(2) = 3e-16
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +2
Query: 374 QDRNKRFREN*LYETNKQTKNPWVFESE 457
Q+ +++ + LYE +KQTKNPWVFESE
Sbjct: 893 QEASRKLVFSQLYEASKQTKNPWVFESE 920
>gb|AEX94348.1| RNA polymerase beta subunit (chloroplast) [Bowiea volubilis]
Length = 1070
Score = 73.2 bits (178), Expect(2) = 3e-16
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = +3
Query: 477 KNKIFDGRTGNPFELPAIIGKLYIQK*IYQVVDIIHGRFRGHYTLVTQSPI 629
K++IFDGRTG+PFE P +IGK YI K I+QV D IHGR GHY LVTQ P+
Sbjct: 924 KSRIFDGRTGDPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPL 974
Score = 38.1 bits (87), Expect(2) = 3e-16
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +2
Query: 374 QDRNKRFREN*LYETNKQTKNPWVFESE 457
Q+ +++ + LYE +KQTKNPWVFESE
Sbjct: 893 QEASRKLVFSELYEASKQTKNPWVFESE 920
>gb|AFB18357.1| RNA polymerase beta subunit, partial [Tradescantia ohiensis]
Length = 1083
Score = 74.7 bits (182), Expect(2) = 4e-16
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = +3
Query: 477 KNKIFDGRTGNPFELPAIIGKLYIQK*IYQVVDIIHGRFRGHYTLVTQSPI 629
K++IFDGRTGNPFE P ++GK YI K I+QV D IHGR GHY LVTQ P+
Sbjct: 937 KSRIFDGRTGNPFEQPVLVGKSYILKLIHQVDDKIHGRSSGHYALVTQQPL 987
Score = 36.2 bits (82), Expect(2) = 4e-16
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 374 QDRNKRFREN*LYETNKQTKNPWVFESE 457
Q+ +++ + LYE +KQTKNPWVFE E
Sbjct: 906 QEASRKLVFSQLYEASKQTKNPWVFEPE 933
>gb|AFB18337.1| RNA polymerase beta subunit, partial [Hosta ventricosa]
Length = 1077
Score = 74.3 bits (181), Expect(2) = 5e-16
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +3
Query: 477 KNKIFDGRTGNPFELPAIIGKLYIQK*IYQVVDIIHGRFRGHYTLVTQSPI 629
K+KIFDGRTG+PFE P +IGK YI K I+QV D IHGR GHY LVTQ P+
Sbjct: 932 KSKIFDGRTGDPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPL 982
Score = 36.2 bits (82), Expect(2) = 5e-16
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 374 QDRNKRFREN*LYETNKQTKNPWVFESE 457
Q+ +++ + LYE +KQTKNPWVFE E
Sbjct: 901 QEASRKLVFSELYEASKQTKNPWVFEPE 928
>gb|AFB18336.1| RNA polymerase beta subunit, partial [Hesperaloe parviflora]
Length = 1077
Score = 74.3 bits (181), Expect(2) = 5e-16
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +3
Query: 477 KNKIFDGRTGNPFELPAIIGKLYIQK*IYQVVDIIHGRFRGHYTLVTQSPI 629
K+KIFDGRTG+PFE P +IGK YI K I+QV D IHGR GHY LVTQ P+
Sbjct: 932 KSKIFDGRTGDPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPL 982
Score = 36.2 bits (82), Expect(2) = 5e-16
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 374 QDRNKRFREN*LYETNKQTKNPWVFESE 457
Q+ +++ + LYE +KQTKNPWVFE E
Sbjct: 901 QEASRKLVFSELYEASKQTKNPWVFEPE 928
>ref|YP_004769622.1| RNA polymerase beta subunit (chloroplast) [Spirodela polyrhiza]
gi|341834063|gb|AEK94334.1| RNA polymerase beta subunit
[Spirodela polyrhiza]
Length = 1072
Score = 74.3 bits (181), Expect(2) = 5e-16
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +3
Query: 477 KNKIFDGRTGNPFELPAIIGKLYIQK*IYQVVDIIHGRFRGHYTLVTQSPI 629
K+KIFDGRTG+PFE P +IGK YI K I+QV D IHGR GHY LVTQ P+
Sbjct: 926 KSKIFDGRTGDPFEQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPL 976
Score = 36.2 bits (82), Expect(2) = 5e-16
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 374 QDRNKRFREN*LYETNKQTKNPWVFESE 457
Q+ +++ + LYE +KQTKNPWVFE E
Sbjct: 895 QEASRKLVFSELYEASKQTKNPWVFEPE 922