BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00032099
         (404 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_068549.1| replicase [Botrytis virus F] gi|81968259|sp|Q9D...    61   1e-07
gb|AHB87051.1| putative RNA replicase, partial [Escobaria virus]       59   5e-07
ref|NP_112029.1| RNA-dependant RNA polymerase [Banana mild mosai...    59   7e-07
ref|YP_002308447.1| RNA-dependent RNA polymerase [Hippeastrum la...    57   2e-06
ref|YP_008855206.1| replicase [Garlic virus D] gi|558868945|gb|A...    56   6e-06
ref|NP_047278.1| RNA-dependent RNA polymerase [Cherry green ring...    55   8e-06
ref|YP_004659200.1| replication-associated polyprotein [Blackber...    55   8e-06
emb|CAP46903.1| replicase domain [Phlomis mottle virus]                55   8e-06
gb|AFU54613.1| RNA-dependent RNA polymerase [Cherry green ring m...    55   1e-05
gb|AAX18617.1| RNA-dependent RNA polymerase [Banana mild mosaic ...    55   1e-05

>ref|NP_068549.1| replicase [Botrytis virus F] gi|81968259|sp|Q9DRA1.1|RDRP_BOTVF
            RecName: Full=RNA replication protein; Includes: RecName:
            Full=RNA-directed RNA polymerase; Includes: RecName:
            Full=Helicase; Includes: RecName: Full=Methyltransferase
            gi|10801178|gb|AAG23416.1|AF238884_2 replicase [Botrytis
            virus F]
          Length = 1896

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 32/127 (25%), Positives = 56/127 (44%)
 Frame = -1

Query: 401  GQLIHEYDITQTLGDAPYTLFLENELFDAFPDNFLFYRRMNPQQFIDAYKRRWRVGNGVH 222
            GQ I  +     L   PY  +++  +    P +   + R   + F       W       
Sbjct: 1612 GQSIASFRAEVLLAWGPYARYIDRRIRALLPPHVYIHSRRTNEDFEKFVAAHWDHTREST 1671

Query: 221  TSDVTRWDVGCDAGVLNFDVHVMHRCGFPAEYVRTYIERRLNSRSQHGPMATMQNSGDRY 42
              D T +D   DA  +NF+  +M R  FP + +  Y+E + +  S  GP+A M+ SG+ +
Sbjct: 1672 DGDYTAYDASQDATFVNFETLLMRRLDFPLDIIEAYVEMKASITSHFGPLAIMRFSGEVW 1731

Query: 41   TWALNSI 21
            T+  N++
Sbjct: 1732 TYLFNTL 1738


>gb|AHB87051.1| putative RNA replicase, partial [Escobaria virus]
          Length = 851

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 37/126 (29%), Positives = 56/126 (44%)
 Frame = -1

Query: 401 GQLIHEYDITQTLGDAPYTLFLENELFDAFPDNFLFYRRMNPQQFIDAYKRRWRVGNGVH 222
           GQ I  +     L      L+L  +     PDN        P+QF +    RW      +
Sbjct: 531 GQTISAFKQQTVLLTTTLALYLRKKREQHQPDNVFIMCEKTPEQFNEFVINRWNFDRPAY 590

Query: 221 TSDVTRWDVGCDAGVLNFDVHVMHRCGFPAEYVRTYIERRLNSRSQHGPMATMQNSGDRY 42
           TSD T++D   DA  LNF++      G P E V  Y   + N+++  G +A M+ SG+  
Sbjct: 591 TSDYTQYDQSQDACFLNFELRKARHLGVPEEVVNFYRFIKTNAKTFVGNLAVMRLSGEGP 650

Query: 41  TWALNS 24
           T+  N+
Sbjct: 651 TFDANT 656


>ref|NP_112029.1| RNA-dependant RNA polymerase [Banana mild mosaic virus]
            gi|13507175|gb|AAK28489.1|AF314662_1 RNA-dependant RNA
            polymerase [Banana mild mosaic virus]
          Length = 1771

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 34/116 (29%), Positives = 57/116 (49%)
 Frame = -1

Query: 356  APYTLFLENELFDAFPDNFLFYRRMNPQQFIDAYKRRWRVGNGVHTSDVTRWDVGCDAGV 177
            APY  ++E  + +  P NF  +   N     D  K+    G  +  SD   +D   D+ +
Sbjct: 1503 APYVRYMEKIVNENLPKNFYIHNGKNFDDLNDYVKKNNFSGRCIE-SDYEAFDASQDSQI 1561

Query: 176  LNFDVHVMHRCGFPAEYVRTYIERRLNSRSQHGPMATMQNSGDRYTWALNSIRRAV 9
            L F+V +M R   P E++  Y+  + N RS+ G MA M+ +G+  T+  N++   V
Sbjct: 1562 LAFEVAIMRRMNMPQEFIDDYVWLKCNLRSKLGNMAIMRFTGEAATFLFNTMANIV 1617


>ref|YP_002308447.1| RNA-dependent RNA polymerase [Hippeastrum latent virus]
            gi|70906991|gb|AAZ15106.1| RNA-dependent RNA polymerase
            [Hippeastrum latent virus]
          Length = 1971

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/112 (28%), Positives = 58/112 (51%)
 Frame = -1

Query: 356  APYTLFLENELFDAFPDNFLFYRRMNPQQFIDAYKRRWRVGNGVHTSDVTRWDVGCDAGV 177
            APY  ++E +L  A PD F  +     ++ +D + +++R       SD   +D   D  +
Sbjct: 1712 APYMRYIEKKLHQALPDKFYIHSGKGLEE-LDCWVKKYRFDGVCTESDYEAFDASQDQYI 1770

Query: 176  LNFDVHVMHRCGFPAEYVRTYIERRLNSRSQHGPMATMQNSGDRYTWALNSI 21
            + F+V VM+  G P + VR Y+  + +  S+ G  A M+ SG+  T+  N++
Sbjct: 1771 VAFEVAVMNYLGLPRDLVRDYLYIKTHLGSKLGNFAIMRFSGEASTFLFNTM 1822


>ref|YP_008855206.1| replicase [Garlic virus D] gi|558868945|gb|AHA93785.1| replicase
            [Garlic virus D]
          Length = 1562

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/126 (28%), Positives = 56/126 (44%)
 Frame = -1

Query: 401  GQLIHEYDITQTLGDAPYTLFLENELFDAFPDNFLFYRRMNPQQFIDAYKRRWRVGNGVH 222
            GQ I  +  +  L      L+L  +     PDN        P+QF      RW      +
Sbjct: 1209 GQTISAFKQSTVLLTTTMALYLRKKREGHQPDNVFVMCEKTPEQFNSFVLTRWNFKRPNY 1268

Query: 221  TSDVTRWDVGCDAGVLNFDVHVMHRCGFPAEYVRTYIERRLNSRSQHGPMATMQNSGDRY 42
            TSD T++D   DA  LNF++      G P E V  Y   + ++++  G +A M+ SG+  
Sbjct: 1269 TSDYTQYDQSQDAAFLNFELRKARHFGIPPEIVDFYAFIKTHAKTFLGNLAIMRLSGEGP 1328

Query: 41   TWALNS 24
            T+  N+
Sbjct: 1329 TFDANT 1334


>ref|NP_047278.1| RNA-dependent RNA polymerase [Cherry green ring mottle virus]
            gi|3599946|gb|AAC35433.1| RNA-dependent RNA polymerase
            [cherry green ring mottle virus]
          Length = 2023

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
 Frame = -1

Query: 356  APYTLFLENELFDAFPDNFLFYRRMNPQQFIDAYKRRWRVGN---GVHT-SDVTRWDVGC 189
            APY  ++E ++F   PDN+  +   N  +      R W + N   G+ T SD   +D   
Sbjct: 1756 APYIRYIEKKVFSHLPDNYYIHSGKNFDEL-----RSWVLRNSFTGMCTESDYEAFDSSQ 1810

Query: 188  DAGVLNFDVHVMHRCGFPAEYVRTYIERRLNSRSQHGPMATMQNSGDRYTWALNSIRRAV 9
            DA +L F+V +M     P + +  Y   + N+RS+ G  A M+ +G+  T+  N++   V
Sbjct: 1811 DANILAFEVSLMRYLRLPRDLIEDYKYLKFNTRSKLGQFAVMRFTGEAGTFLFNTLANMV 1870


>ref|YP_004659200.1| replication-associated polyprotein [Blackberry virus E]
            gi|336139487|gb|AEI17897.1| replication-associated
            polyprotein [Blackberry virus E]
          Length = 1499

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 34/126 (26%), Positives = 57/126 (45%)
 Frame = -1

Query: 401  GQLIHEYDITQTLGDAPYTLFLENELFDAFPDNFLFYRRMNPQQFIDAYKRRWRVGNGVH 222
            GQ I  +  +  L      L+L  +  +  P N        P +F D    RW      +
Sbjct: 1182 GQTISAFKQSTVLLTTTMALYLRKKRLEHQPQNVFIMCEKTPAEFNDFVLNRWDFKTPSY 1241

Query: 221  TSDVTRWDVGCDAGVLNFDVHVMHRCGFPAEYVRTYIERRLNSRSQHGPMATMQNSGDRY 42
            TSD T++D   DA  LNF++      G P E +  Y   ++++++  G +A M+ SG+  
Sbjct: 1242 TSDYTQYDQSQDAAFLNFELRKARHLGVPEEVLDFYKFIKIHAKTFVGNLAIMRLSGEGP 1301

Query: 41   TWALNS 24
            T+  N+
Sbjct: 1302 TFDANT 1307


>emb|CAP46903.1| replicase domain [Phlomis mottle virus]
          Length = 273

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
 Frame = -1

Query: 356 APYTLFLENELFDAFPDNFLFYRRMNPQQFIDAYKRRWRVGNGVHT-SDVTRWDVGCDAG 180
           +PY  ++E ++ +  P NF  ++R N  Q ++++   +  G+ V   SD   +D   D  
Sbjct: 19  SPYCRYIEKKVSEVLPRNFYIHQRKNFDQ-LNSFCLEFMRGDQVCVESDYEAFDASQDCN 77

Query: 179 VLNFDVHVMHRCGFPAEYVRTYIERRLNSRSQHGPMATMQNSGDRYTWALNSIRRAV 9
           +L F+V++M     P   V  YI  + N RS+ G  ATM+ +G+  T+  N++   V
Sbjct: 78  MLAFEVNLMRYLSLPEHIVDKYIFLKTNLRSKLGDFATMRFTGEFCTFLFNTLSNMV 134


>gb|AFU54613.1| RNA-dependent RNA polymerase [Cherry green ring mottle virus]
          Length = 2025

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
 Frame = -1

Query: 356  APYTLFLENELFDAFPDNFLFYRRMNPQQFIDAYKRRWRVGN---GVHT-SDVTRWDVGC 189
            APY  ++E ++F   P N+  +   N  +      R W + N   G+ T SD   +D   
Sbjct: 1758 APYIRYIEKKIFAHLPKNYYIHSGKNFDEL-----RGWVLKNSFVGMCTESDYEAFDSSQ 1812

Query: 188  DAGVLNFDVHVMHRCGFPAEYVRTYIERRLNSRSQHGPMATMQNSGDRYTWALNSIRRAV 9
            DA +L F+V +MH    P + +  Y   + N+RS+ G  A M+ +G+  T+  N++   V
Sbjct: 1813 DANILAFEVSLMHYLRLPRDLIEDYKYLKFNTRSKLGQFAVMRFTGEAGTFLFNTLANMV 1872


>gb|AAX18617.1| RNA-dependent RNA polymerase [Banana mild mosaic virus]
          Length = 104

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 32/95 (33%), Positives = 47/95 (49%)
 Frame = -1

Query: 356 APYTLFLENELFDAFPDNFLFYRRMNPQQFIDAYKRRWRVGNGVHTSDVTRWDVGCDAGV 177
           APY  ++E  + D  P NF  +   N  +  D  KR    GN +  SD   +D   D+ +
Sbjct: 11  APYVRYMEKVINDNLPKNFYIHNGKNFDELNDYVKRNNFNGNRIE-SDYEAFDASQDSQI 69

Query: 176 LNFDVHVMHRCGFPAEYVRTYIERRLNSRSQHGPM 72
           L F+V +M R   P E++  YI  + N RS+ G M
Sbjct: 70  LAFEVAIMKRMNMPREFIDDYIWLKCNLRSKLGNM 104