BLASTX nr result
ID: Akebia22_contig00030580
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia22_contig00030580 (359 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEP33762.1| organelle transcript processing 82, partial [Hesp... 117 2e-24 ref|XP_006827330.1| hypothetical protein AMTR_s00010p00267800 [A... 115 5e-24 gb|AEP33773.1| organelle transcript processing 82, partial [Lobu... 115 8e-24 gb|AEP33761.1| organelle transcript processing 82, partial [Cruc... 115 8e-24 ref|XP_002892433.1| pentatricopeptide repeat-containing protein ... 113 2e-23 ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containi... 112 5e-23 gb|AEP33760.1| organelle transcript processing 82, partial [Caps... 112 7e-23 ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Caps... 111 9e-23 gb|EXC27881.1| hypothetical protein L484_009204 [Morus notabilis] 111 1e-22 ref|XP_007019372.1| Pentatricopeptide repeat superfamily protein... 110 2e-22 gb|AEP33764.1| organelle transcript processing 82, partial [Iber... 110 2e-22 gb|AEP33758.1| organelle transcript processing 82, partial [Barb... 110 2e-22 gb|EMT31807.1| hypothetical protein F775_12997 [Aegilops tauschii] 110 2e-22 gb|AEP33771.1| organelle transcript processing 82, partial [Thla... 110 2e-22 ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis tha... 109 3e-22 gb|AEP33772.1| organelle transcript processing 82, partial [Drab... 109 3e-22 gb|AEP33763.1| organelle transcript processing 82, partial [Isat... 109 3e-22 ref|XP_007014360.1| Pentatricopeptide repeat superfamily protein... 108 6e-22 ref|XP_007014358.1| Pentatricopeptide repeat superfamily protein... 108 6e-22 ref|XP_007014357.1| Pentatricopeptide repeat superfamily protein... 108 6e-22 >gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis] Length = 672 Score = 117 bits (292), Expect = 2e-24 Identities = 57/118 (48%), Positives = 81/118 (68%) Frame = +3 Query: 6 RDIISHTKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQM 185 RD++S+T +I GY G + SAQ +F+++ DVV W AMISGYA+ G KALELF +M Sbjct: 139 RDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEM 198 Query: 186 QETGVKPNPITMASVVSACSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 +T VKP+ TMA+VVSAC+Q G E+GRQ H ++ + G N ++ +L+D+Y K G Sbjct: 199 MKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCG 256 Score = 70.5 bits (171), Expect = 2e-10 Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 4/110 (3%) Frame = +3 Query: 42 YFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITM 221 Y G++ +A + E + DV+ W +I GY +AL LF +M +G PN +TM Sbjct: 252 YSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTM 311 Query: 222 ASVVSACSQLGDFEMGRQAHEFM---IESGMVMNTIVL-TSLLDMYIKGG 359 S++ AC+ LG ++GR H ++ ++ +V N L TSL+DMY K G Sbjct: 312 LSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCG 361 Score = 60.1 bits (144), Expect = 3e-07 Identities = 31/97 (31%), Positives = 54/97 (55%) Frame = +3 Query: 69 AQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQ 248 A SVFE + + ++W M G+A + P AL+L+ M G+ PN T ++ +C++ Sbjct: 28 AISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAK 87 Query: 249 LGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 F+ G+Q H +++ G ++ V TSL+ MY + G Sbjct: 88 SKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNG 124 Score = 55.5 bits (132), Expect = 8e-06 Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 1/90 (1%) Frame = +3 Query: 24 TKIILGYFGIGDLVSAQSVFEKVE-GVDVVLWTAMISGYAQNGAPDKALELFHQMQETGV 200 T +I Y GD+ +A V + + W AMI G+A +G + A ++F +M++ G+ Sbjct: 351 TSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGI 410 Query: 201 KPNPITMASVVSACSQLGDFEMGRQAHEFM 290 +P+ IT ++SACS G ++GR M Sbjct: 411 EPDDITFVGLLSACSHSGMLDLGRNIFRSM 440 >ref|XP_006827330.1| hypothetical protein AMTR_s00010p00267800 [Amborella trichopoda] gi|548831759|gb|ERM94567.1| hypothetical protein AMTR_s00010p00267800 [Amborella trichopoda] Length = 659 Score = 115 bits (289), Expect = 5e-24 Identities = 56/118 (47%), Positives = 80/118 (67%) Frame = +3 Query: 6 RDIISHTKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQM 185 RD++S + +++GY DL SA+ +F ++ DVV WTA+I+GYAQN P +ALELF QM Sbjct: 177 RDVVSWSSLVVGYVRNRDLDSAKELFLEMPERDVVSWTALIAGYAQNKQPKEALELFQQM 236 Query: 186 QETGVKPNPITMASVVSACSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 Q GVKP+ +T+ SV+SAC+QLGD E+G H ++ E G + +L+DMY K G Sbjct: 237 QVAGVKPDEVTLISVISACAQLGDLELGSSIHSYINEKGFWWMISLCNALIDMYAKCG 294 Score = 69.7 bits (169), Expect = 4e-10 Identities = 34/100 (34%), Positives = 59/100 (59%) Frame = +3 Query: 3 ERDIISHTKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQ 182 ER+++S ++ Y G L A +F+++ +VV WT MI+G +Q G +AL LF Q Sbjct: 515 ERNVVSWNAMLAAYARSGGLDEAWRLFDEMPERNVVSWTTMIAGCSQTGHSRQALALFRQ 574 Query: 183 MQETGVKPNPITMASVVSACSQLGDFEMGRQAHEFMIESG 302 MQ ++ + + M SV+SAC++LG ++G+ ++ G Sbjct: 575 MQHAHIEADQVVMVSVLSACAELGALDLGKWIDAYISGKG 614 Score = 55.5 bits (132), Expect = 8e-06 Identities = 29/103 (28%), Positives = 57/103 (55%), Gaps = 1/103 (0%) Frame = +3 Query: 54 GDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVV 233 G+L A F + + +W +I G+A G +L LF +M+E +P+ T + ++ Sbjct: 399 GNLAYAYRAFNMIHQPTLPIWNHIIRGFALIGNIGMSLSLFDRMRELEAQPDSFTYSFLL 458 Query: 234 SACSQLGDFEMGRQAHEFMIESGMVMNTI-VLTSLLDMYIKGG 359 AC+ + +G++ H +I +G+ +++ V T+L++MY GG Sbjct: 459 KACAFSMEAGLGQEIHARVIHNGLASSSVFVQTNLINMYATGG 501 >gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima] Length = 695 Score = 115 bits (287), Expect = 8e-24 Identities = 55/118 (46%), Positives = 80/118 (67%) Frame = +3 Query: 6 RDIISHTKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQM 185 RD++S+T +I GY G + SAQ +F+++ DVV W AMISGYA+ G +ALELF +M Sbjct: 152 RDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEM 211 Query: 186 QETGVKPNPITMASVVSACSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 +T V+P+ TM SVVSAC+Q E+GRQ H ++ + G N ++ +L+D+YIK G Sbjct: 212 MKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCG 269 Score = 73.2 bits (178), Expect = 4e-11 Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 2/108 (1%) Frame = +3 Query: 42 YFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITM 221 Y G++ +A +FE + DV+ W +I GY +AL LF +M +G PN +TM Sbjct: 265 YIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTM 324 Query: 222 ASVVSACSQLGDFEMGRQAHEFMIE--SGMVMNTIVLTSLLDMYIKGG 359 S++ AC+ LG E+GR H ++ + G+ + TSL+DMY K G Sbjct: 325 LSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCG 372 Score = 64.3 bits (155), Expect = 2e-08 Identities = 31/91 (34%), Positives = 52/91 (57%) Frame = +3 Query: 24 TKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVK 203 T +I Y GD+ +AQ VF+ + + W AMI G+A +G + A ++F +M++ ++ Sbjct: 362 TSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIE 421 Query: 204 PNPITMASVVSACSQLGDFEMGRQAHEFMIE 296 P+ IT ++SACS G ++GR M E Sbjct: 422 PDDITFVGLLSACSHSGMLDLGRHIFRSMKE 452 Score = 61.6 bits (148), Expect = 1e-07 Identities = 31/97 (31%), Positives = 55/97 (56%) Frame = +3 Query: 69 AQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQ 248 A SVFE ++ ++++W M G+A + P AL L+ M G+ PN T ++ +C++ Sbjct: 41 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK 100 Query: 249 LGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 F G+Q H +++ G ++ V TSL+ MY++ G Sbjct: 101 SKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNG 137 >gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya wallichii] Length = 710 Score = 115 bits (287), Expect = 8e-24 Identities = 55/118 (46%), Positives = 80/118 (67%) Frame = +3 Query: 6 RDIISHTKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQM 185 RD++S+T +I GY G + SAQ +F+++ DVV W AMISGYA+ G +ALELF +M Sbjct: 167 RDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEM 226 Query: 186 QETGVKPNPITMASVVSACSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 +T V+P+ TM SVVSAC+Q E+GRQ H ++ + G N ++ +L+D+YIK G Sbjct: 227 MKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCG 284 Score = 73.2 bits (178), Expect = 4e-11 Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 2/108 (1%) Frame = +3 Query: 42 YFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITM 221 Y G++ +A +FE + DV+ W +I GY +AL LF +M +G PN +TM Sbjct: 280 YIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTM 339 Query: 222 ASVVSACSQLGDFEMGRQAHEFMIE--SGMVMNTIVLTSLLDMYIKGG 359 S++ AC+ LG E+GR H ++ + G+ + TSL+DMY K G Sbjct: 340 LSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCG 387 Score = 64.3 bits (155), Expect = 2e-08 Identities = 31/91 (34%), Positives = 52/91 (57%) Frame = +3 Query: 24 TKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVK 203 T +I Y GD+ +AQ VF+ + + W AMI G+A +G + A ++F +M++ ++ Sbjct: 377 TSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIE 436 Query: 204 PNPITMASVVSACSQLGDFEMGRQAHEFMIE 296 P+ IT ++SACS G ++GR M E Sbjct: 437 PDDITFVGLLSACSHSGMLDLGRHIFRSMKE 467 Score = 61.6 bits (148), Expect = 1e-07 Identities = 31/97 (31%), Positives = 55/97 (56%) Frame = +3 Query: 69 AQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQ 248 A SVFE ++ ++++W M G+A + P AL L+ M G+ PN T ++ +C++ Sbjct: 56 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK 115 Query: 249 LGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 F G+Q H +++ G ++ V TSL+ MY++ G Sbjct: 116 SKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNG 152 >ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 741 Score = 113 bits (283), Expect = 2e-23 Identities = 54/118 (45%), Positives = 80/118 (67%) Frame = +3 Query: 6 RDIISHTKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQM 185 RD++S+T +I GY G + SAQ +F+++ DVV W AMISGYA+ G +ALELF +M Sbjct: 198 RDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEM 257 Query: 186 QETGVKPNPITMASVVSACSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 +T ++P+ TM +VVSAC+Q G E+GRQ H ++ + G N ++ SL+D+Y K G Sbjct: 258 MKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCG 315 Score = 70.5 bits (171), Expect = 2e-10 Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 2/108 (1%) Frame = +3 Query: 42 YFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITM 221 Y G+L +A +FE + DV+ W +I GY +AL LF +M +G +PN +TM Sbjct: 311 YSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTM 370 Query: 222 ASVVSACSQLGDFEMGRQAHEFMIE--SGMVMNTIVLTSLLDMYIKGG 359 S++ AC+ LG ++GR H ++ + + + TSL+DMY K G Sbjct: 371 LSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCG 418 Score = 65.9 bits (159), Expect = 6e-09 Identities = 31/91 (34%), Positives = 52/91 (57%) Frame = +3 Query: 24 TKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVK 203 T +I Y GD+ +A VF + + W AMI G+A +G D A ++F +M++ G++ Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIE 467 Query: 204 PNPITMASVVSACSQLGDFEMGRQAHEFMIE 296 P+ IT ++SACS+ G ++GR M + Sbjct: 468 PDDITFVGLLSACSRSGMLDLGRHIFRTMTQ 498 Score = 62.8 bits (151), Expect = 5e-08 Identities = 30/97 (30%), Positives = 57/97 (58%) Frame = +3 Query: 69 AQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQ 248 A SVFE ++ ++++W M G+A + P AL+L+ M G+ PN T ++ +C++ Sbjct: 87 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 146 Query: 249 LGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 F+ G+Q H +++ G ++ V TSL+ +Y++ G Sbjct: 147 SKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNG 183 >ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein At5g06540-like [Vitis vinifera] Length = 623 Score = 112 bits (280), Expect = 5e-23 Identities = 51/117 (43%), Positives = 83/117 (70%) Frame = +3 Query: 9 DIISHTKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQ 188 D++S T +I G+ GD+ SA+ +F+++ ++V W+ MISGYAQN DKA+ELF +Q Sbjct: 184 DVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQ 243 Query: 189 ETGVKPNPITMASVVSACSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 GV+ N M SV+S+C+ LG E+G +AH++++++GM +N I+ T+L+DMY + G Sbjct: 244 SQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCG 300 Score = 61.6 bits (148), Expect = 1e-07 Identities = 30/97 (30%), Positives = 54/97 (55%) Frame = +3 Query: 69 AQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQ 248 A +F +++ ++ ++ AMI G++ + PD+A + Q Q G+ P+ +T +V +C++ Sbjct: 72 ASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTK 131 Query: 249 LGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 L MG QAH +I+ G + V SL+ MY G Sbjct: 132 LHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFG 168 Score = 61.6 bits (148), Expect = 1e-07 Identities = 35/94 (37%), Positives = 52/94 (55%) Frame = +3 Query: 9 DIISHTKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQ 188 ++I T ++ Y G + A VFE + D + WTA+I+G A +G +++L+ F M Sbjct: 285 NLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMV 344 Query: 189 ETGVKPNPITMASVVSACSQLGDFEMGRQAHEFM 290 E G+ P IT +V+SACS G E G Q E M Sbjct: 345 EAGLTPRDITFTAVLSACSHGGLVERGFQIFESM 378 >gb|AEP33760.1| organelle transcript processing 82, partial [Capsella bursa-pastoris] Length = 706 Score = 112 bits (279), Expect = 7e-23 Identities = 53/118 (44%), Positives = 80/118 (67%) Frame = +3 Query: 6 RDIISHTKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQM 185 RD++S+T +I GY G + SAQ +F+++ DVV W A+ISGYA+ G +ALELF +M Sbjct: 167 RDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEM 226 Query: 186 QETGVKPNPITMASVVSACSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 +T VKP+ TM +V+SAC+Q E+GRQ H ++ + G N ++ +L+D+YIK G Sbjct: 227 MKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCG 284 Score = 73.9 bits (180), Expect = 2e-11 Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 2/108 (1%) Frame = +3 Query: 42 YFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITM 221 Y G++ +A +FE + DV+ W +I GY +AL LF +M +G PN +TM Sbjct: 280 YIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTM 339 Query: 222 ASVVSACSQLGDFEMGRQAHEFMIE--SGMVMNTIVLTSLLDMYIKGG 359 S++ AC+ LG ++GR H ++ + G+ + + TSL+DMY K G Sbjct: 340 LSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCG 387 Score = 67.0 bits (162), Expect = 3e-09 Identities = 32/91 (35%), Positives = 53/91 (58%) Frame = +3 Query: 24 TKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVK 203 T +I Y GD+ +AQ VF+ + + W AMI G+A +G + A ++F +M++ G++ Sbjct: 377 TSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIE 436 Query: 204 PNPITMASVVSACSQLGDFEMGRQAHEFMIE 296 P+ IT ++SACS G ++GR M E Sbjct: 437 PDDITFVGLLSACSHSGMLDLGRHIFRSMTE 467 Score = 64.3 bits (155), Expect = 2e-08 Identities = 33/100 (33%), Positives = 56/100 (56%) Frame = +3 Query: 60 LVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSA 239 L A SVF+ ++ ++++W M G+A + P AL L+ M G+ PN T ++ A Sbjct: 53 LTYAISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKA 112 Query: 240 CSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 C++ F G+Q H +++ G ++ V TSL+ MY+K G Sbjct: 113 CAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNG 152 >ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Capsella rubella] gi|482575565|gb|EOA39752.1| hypothetical protein CARUB_v10008399mg [Capsella rubella] Length = 740 Score = 111 bits (278), Expect = 9e-23 Identities = 53/118 (44%), Positives = 79/118 (66%) Frame = +3 Query: 6 RDIISHTKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQM 185 RD++S+T +I GY G + SAQ +F+++ DVV W A+ISGYA+ G +ALELF +M Sbjct: 197 RDVVSYTALIKGYASNGYIESAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEM 256 Query: 186 QETGVKPNPITMASVVSACSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 +T VKP+ TM +V+SAC Q E+GRQ H ++ + G N ++ +L+D+YIK G Sbjct: 257 MQTNVKPDESTMVTVLSACGQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCG 314 Score = 72.0 bits (175), Expect = 8e-11 Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 2/108 (1%) Frame = +3 Query: 42 YFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITM 221 Y G++ +A +FE + DV+ W +I GY +AL LF +M G PN +TM Sbjct: 310 YIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRLGEIPNEVTM 369 Query: 222 ASVVSACSQLGDFEMGRQAHEFMIE--SGMVMNTIVLTSLLDMYIKGG 359 S++ AC+ LG ++GR H ++ + G+ + + TSL+DMY K G Sbjct: 370 LSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCG 417 Score = 66.2 bits (160), Expect = 4e-09 Identities = 32/91 (35%), Positives = 52/91 (57%) Frame = +3 Query: 24 TKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVK 203 T +I Y GD+ +AQ VF+ + + W AMI G+A +G + A ++F +M + G++ Sbjct: 407 TSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMGKNGIE 466 Query: 204 PNPITMASVVSACSQLGDFEMGRQAHEFMIE 296 P+ IT ++SACS G ++GR M E Sbjct: 467 PDDITFVGLLSACSHSGMLDLGRHIFRSMTE 497 Score = 64.3 bits (155), Expect = 2e-08 Identities = 33/100 (33%), Positives = 56/100 (56%) Frame = +3 Query: 60 LVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSA 239 L A SVFE ++ ++++W M G+A + P AL L+ M G+ PN T ++ + Sbjct: 83 LTYAISVFESIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKS 142 Query: 240 CSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 C++ F G+Q H +++ G ++ V TSL+ MY+K G Sbjct: 143 CAKSRAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNG 182 >gb|EXC27881.1| hypothetical protein L484_009204 [Morus notabilis] Length = 619 Score = 111 bits (277), Expect = 1e-22 Identities = 54/110 (49%), Positives = 75/110 (68%), Gaps = 1/110 (0%) Frame = +3 Query: 33 ILGYFG-IGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPN 209 ++G +G GDL SA+ VF+ + D+V W AMISGYAQNG D+A+ LF M+E G+ PN Sbjct: 215 LIGMYGKCGDLCSARRVFDSMTKKDLVTWNAMISGYAQNGLSDEAIRLFGDMKEAGINPN 274 Query: 210 PITMASVVSACSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 IT+ V+SAC+Q+G +MG+ F +ESG+ + V T+LLDMY K G Sbjct: 275 KITLVGVLSACAQVGALDMGKWVDNFALESGLQHDVYVATALLDMYAKCG 324 Score = 82.8 bits (203), Expect = 5e-14 Identities = 40/110 (36%), Positives = 69/110 (62%) Frame = +3 Query: 30 IILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPN 209 +I Y G+L A+ VF+++ + W +MISGY++ G +A+ELF +M++ G+ P Sbjct: 114 LITMYARCGELGCAREVFDEITLRGLSSWNSMISGYSKMGYAREAVELFGEMRDDGIAPV 173 Query: 210 PITMASVVSACSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 +T+ SV+ AC LGD +GR EF++E + +N+ + ++L+ MY K G Sbjct: 174 EMTLVSVLGACGDLGDLSLGRWVEEFVVEKSLEVNSYLGSALIGMYGKCG 223 Score = 56.2 bits (134), Expect = 5e-06 Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 4/123 (3%) Frame = +3 Query: 3 ERDIISHTKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQ 182 + D+ T ++ Y G L A VFE++ + V W AMIS A +G +A+ LF++ Sbjct: 307 QHDVYVATALLDMYAKCGSLDDALRVFEEMPQKNEVSWNAMISALAFHGRAIEAISLFNR 366 Query: 183 MQETG---VKPNPITMASVVSACSQLGDFEMGRQAHEFMIES-GMVMNTIVLTSLLDMYI 350 M E G +PN IT V+SAC G + GR+ + S G+ + ++D+ Sbjct: 367 MIEEGGALARPNDITFVGVLSACVHAGLVDEGRRLFNSVSSSFGLAPKIEHYSCMVDLLA 426 Query: 351 KGG 359 + G Sbjct: 427 RAG 429 >ref|XP_007019372.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao] gi|508724700|gb|EOY16597.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao] Length = 578 Score = 110 bits (276), Expect = 2e-22 Identities = 50/119 (42%), Positives = 84/119 (70%) Frame = +3 Query: 3 ERDIISHTKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQ 182 E++ + +I GY GD+ A+++F+++ ++V W ++ISGYAQNG +KALE+F + Sbjct: 230 EKNFYVWSSMISGYCKRGDVKEARNIFDRIPVRNLVNWNSLISGYAQNGFCEKALEMFRK 289 Query: 183 MQETGVKPNPITMASVVSACSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 MQ G +P+ +T+ S++SAC+QLG+ ++G++ H + E G+V+N VL +LLDMY K G Sbjct: 290 MQSEGFEPDEVTITSILSACAQLGELDVGKEIHYLIKEKGIVVNQFVLNALLDMYAKCG 348 Score = 61.2 bits (147), Expect = 1e-07 Identities = 34/106 (32%), Positives = 56/106 (52%) Frame = +3 Query: 42 YFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITM 221 Y GDL A+ +FE + W +MISG+A +G +ALE F +M+++ P+ IT Sbjct: 344 YAKCGDLAHARLIFEGMSRRTSACWNSMISGFALHGQSSEALEYFRRMEQSNEMPDEITF 403 Query: 222 ASVVSACSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 S++SAC+ G + G M + G+V + L+D+ + G Sbjct: 404 LSLLSACAHGGFVDAGLDIFSKMEKYGLVPSVKHYGCLVDLLGRAG 449 >gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara] Length = 666 Score = 110 bits (276), Expect = 2e-22 Identities = 53/118 (44%), Positives = 79/118 (66%) Frame = +3 Query: 6 RDIISHTKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQM 185 RD++S+T +I GY G + +AQ +F+++ DVV W AMISGYA+ G +ALELF M Sbjct: 155 RDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM 214 Query: 186 QETGVKPNPITMASVVSACSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 +T V+P+ TM +VVSAC+Q G E+GRQ H ++ + G N ++ +L+D+Y K G Sbjct: 215 MKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCG 272 Score = 73.2 bits (178), Expect = 4e-11 Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 2/108 (1%) Frame = +3 Query: 42 YFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITM 221 Y G+L +A +FE + DV+ W +I GY +AL LF +M +G PN +TM Sbjct: 268 YSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTM 327 Query: 222 ASVVSACSQLGDFEMGRQAHEFMIE--SGMVMNTIVLTSLLDMYIKGG 359 S++ AC+ LG ++GR H ++ + G+ + + TSL+DMY K G Sbjct: 328 LSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCG 375 Score = 64.7 bits (156), Expect = 1e-08 Identities = 30/91 (32%), Positives = 51/91 (56%) Frame = +3 Query: 24 TKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVK 203 T +I Y GD+ +A VF + + W AMI G+A +G D + ++F +M++ G++ Sbjct: 365 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIE 424 Query: 204 PNPITMASVVSACSQLGDFEMGRQAHEFMIE 296 P+ IT ++SACS G ++GR M + Sbjct: 425 PDDITFVGLLSACSHSGMLDLGRHIFRSMTQ 455 Score = 63.9 bits (154), Expect = 2e-08 Identities = 31/97 (31%), Positives = 57/97 (58%) Frame = +3 Query: 69 AQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQ 248 A SVFE ++ ++++W M G+A + P AL+L+ M G+ PN T ++ +C++ Sbjct: 44 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 103 Query: 249 LGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 F+ G+Q H +++ G ++ V TSL+ MY++ G Sbjct: 104 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNG 140 >gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna] Length = 710 Score = 110 bits (276), Expect = 2e-22 Identities = 52/118 (44%), Positives = 80/118 (67%) Frame = +3 Query: 6 RDIISHTKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQM 185 RD++S+T +I GY G + SAQ +F+++ DVV W A+ISGYA G +AL+LF +M Sbjct: 167 RDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEM 226 Query: 186 QETGVKPNPITMASVVSACSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 +T VKP+ TM +VVSAC+Q G ++GRQ H ++ + G+ N ++ +L+D+Y K G Sbjct: 227 MKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCG 284 Score = 75.1 bits (183), Expect = 1e-11 Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 2/108 (1%) Frame = +3 Query: 42 YFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITM 221 Y G++ +A +F+ + DV+ W MI GY +AL LF +M +G PN +TM Sbjct: 280 YSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTM 339 Query: 222 ASVVSACSQLGDFEMGRQAHEFMIE--SGMVMNTIVLTSLLDMYIKGG 359 S++ AC+QLG + GR H ++ + G+ + + TSL+DMY K G Sbjct: 340 LSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCG 387 Score = 63.9 bits (154), Expect = 2e-08 Identities = 31/97 (31%), Positives = 57/97 (58%) Frame = +3 Query: 69 AQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQ 248 A SVFE ++ ++++W M G+A + P A++L+ M G+ PN T ++ +C++ Sbjct: 56 AISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAK 115 Query: 249 LGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 L + G+Q H +++ G ++ V TSL+ MY+K G Sbjct: 116 LKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNG 152 Score = 59.7 bits (143), Expect = 4e-07 Identities = 29/92 (31%), Positives = 52/92 (56%) Frame = +3 Query: 24 TKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVK 203 T +I Y GD+ +A VF + + AMI G+A +G + A ++F +M++ G++ Sbjct: 377 TSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIE 436 Query: 204 PNPITMASVVSACSQLGDFEMGRQAHEFMIES 299 P+ IT ++SACS G ++GR+ M ++ Sbjct: 437 PDDITFVGLLSACSHSGMLDLGRRIFRSMTQN 468 >gb|EMT31807.1| hypothetical protein F775_12997 [Aegilops tauschii] Length = 1042 Score = 110 bits (275), Expect = 2e-22 Identities = 52/119 (43%), Positives = 80/119 (67%) Frame = +3 Query: 3 ERDIISHTKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQ 182 +RD ++ +I Y GDLVSA+ +FE++ G D++ W++MISGY+Q ALELF + Sbjct: 728 DRDTVTMNAMITAYAKAGDLVSARRLFEEISGKDLISWSSMISGYSQASQFSDALELFRE 787 Query: 183 MQETGVKPNPITMASVVSACSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 MQ VKP+ + +ASV+SAC+ LG ++G+ H++M G+ +TI+ SL+DMY K G Sbjct: 788 MQRAKVKPDAVVLASVLSACAHLGALDLGKWIHDYMRRHGIEADTILHNSLIDMYAKCG 846 Score = 74.7 bits (182), Expect = 1e-11 Identities = 40/117 (34%), Positives = 69/117 (58%) Frame = +3 Query: 9 DIISHTKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQ 188 DI +I Y GDL A+SVF+++ DVV W ++I GY++ + L+LF M Sbjct: 598 DIFVSNSLIHLYAACGDLCCARSVFDEMLVKDVVSWNSLICGYSRRNRLKEVLKLFKLMH 657 Query: 189 ETGVKPNPITMASVVSACSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 + GV+ + +TMA VVSAC++LGD+ M +++ + + ++ + +L+D Y + G Sbjct: 658 DEGVRADKVTMAKVVSACTRLGDWSMADCLVKYIEDYCIEVDVYLGNTLIDYYGRRG 714 Score = 68.9 bits (167), Expect = 7e-10 Identities = 37/119 (31%), Positives = 69/119 (57%), Gaps = 1/119 (0%) Frame = +3 Query: 6 RDIISHTKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQM 185 ++ ++ +I G+ G++ A+ +FE++ ++V WT MI GY ++ +A+ LF +M Sbjct: 157 KNAVTWNVMITGFAARGEVEYARLLFERMPCRNIVSWTGMIDGYTRSCRSVEAVALFRRM 216 Query: 186 QETGVKPNPITMASVVSACSQLGDFEMGRQAHEFMIESG-MVMNTIVLTSLLDMYIKGG 359 G+ P+ IT+ +VV A S +G +G H + + G +V++ V SL+D+Y K G Sbjct: 217 MAEGIDPSEITVLAVVPAVSNIGRILLGETLHGYCEKKGLLVLDIRVGNSLIDLYAKIG 275 Score = 64.7 bits (156), Expect = 1e-08 Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 7/100 (7%) Frame = +3 Query: 3 ERDIISHTKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQ 182 E D I H +I Y G A VF +++ D + W ++I G A NGA ++AL FH Sbjct: 829 EADTILHNSLIDMYAKCGSTKEALQVFREMKEKDTLSWNSIIMGMANNGAEEEALSAFHA 888 Query: 183 MQETGVKPNPITMASVVSACSQ-------LGDFEMGRQAH 281 M G +PN +T V+ AC+ LG FE R H Sbjct: 889 MIAEGFRPNEVTFLGVLIACANAELVEEGLGHFESMRSVH 928 Score = 63.9 bits (154), Expect = 2e-08 Identities = 33/88 (37%), Positives = 56/88 (63%), Gaps = 1/88 (1%) Frame = +3 Query: 9 DIISHTKIILGYFGIGDLVSAQSVF-EKVEGVDVVLWTAMISGYAQNGAPDKALELFHQM 185 DI +I Y IG + ++ +F E ++G ++V WT++ISG+A +G +A+ELF +M Sbjct: 260 DIRVGNSLIDLYAKIGSIKNSLKIFHEMLDGRNLVSWTSIISGFAMHGLSTEAVELFAEM 319 Query: 186 QETGVKPNPITMASVVSACSQLGDFEMG 269 + G++P+ +T SV+SAC+ G E G Sbjct: 320 RRAGIRPDRVTFLSVLSACNHGGLVEQG 347 Score = 61.2 bits (147), Expect = 1e-07 Identities = 32/111 (28%), Positives = 62/111 (55%), Gaps = 2/111 (1%) Frame = +3 Query: 33 ILGYFGI--GDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKP 206 IL ++ I DLV A V+ ++E L ++ G AQ+ AP+ A+ + + + ++P Sbjct: 503 ILRFYAILQPDLVLAHKVYGQIEAPTTYLRNIILRGLAQSDAPEDAIAFYKKARGKCMEP 562 Query: 207 NPITMASVVSACSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 + +T VV AC+++G + G+Q H +++ G++ + V SL+ +Y G Sbjct: 563 DNLTFPFVVKACARIGALKEGKQMHNHVLKFGLLSDIFVSNSLIHLYAACG 613 >gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense] Length = 673 Score = 110 bits (275), Expect = 2e-22 Identities = 52/118 (44%), Positives = 81/118 (68%) Frame = +3 Query: 6 RDIISHTKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQM 185 RD++S+T +I GY G++ SAQ +F+++ DVV W AMISGYA+ G+ +ALELF +M Sbjct: 130 RDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEM 189 Query: 186 QETGVKPNPITMASVVSACSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 +T V+P+ TM +V+SAC+Q E+GRQ H ++ + G N ++ +L+D+Y K G Sbjct: 190 MKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCG 247 Score = 67.8 bits (164), Expect = 2e-09 Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 2/108 (1%) Frame = +3 Query: 42 YFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITM 221 Y G + +A +FE + DVV W +I GY +AL LF +M +G PN +T+ Sbjct: 243 YSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTI 302 Query: 222 ASVVSACSQLGDFEMGRQAHEFMIE--SGMVMNTIVLTSLLDMYIKGG 359 S++ AC+ LG ++GR H ++ + + + TSL+DMY K G Sbjct: 303 VSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCG 350 Score = 63.5 bits (153), Expect = 3e-08 Identities = 30/91 (32%), Positives = 51/91 (56%) Frame = +3 Query: 24 TKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVK 203 T +I Y GD+ +A VF + + W AMI G+A +G + +LF +M++ G++ Sbjct: 340 TSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIE 399 Query: 204 PNPITMASVVSACSQLGDFEMGRQAHEFMIE 296 P+ IT ++SACS G ++GR + M + Sbjct: 400 PDDITFVGLLSACSHSGKLDLGRHIFKSMTQ 430 Score = 62.4 bits (150), Expect = 6e-08 Identities = 32/97 (32%), Positives = 54/97 (55%) Frame = +3 Query: 69 AQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQ 248 A SVF ++ + ++W M+ GYA + P AL+L+ M G+ PN T ++ +C++ Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78 Query: 249 LGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 FE G+Q H +++ G + V TSL+ MY + G Sbjct: 79 SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNG 115 >ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis thaliana] gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana] gi|332190118|gb|AEE28239.1| chloroplast RNA editing factor [Arabidopsis thaliana] Length = 741 Score = 109 bits (273), Expect = 3e-22 Identities = 53/118 (44%), Positives = 79/118 (66%) Frame = +3 Query: 6 RDIISHTKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQM 185 RD++S+T +I GY G + +AQ +F+++ DVV W AMISGYA+ G +ALELF M Sbjct: 198 RDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM 257 Query: 186 QETGVKPNPITMASVVSACSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 +T V+P+ TM +VVSAC+Q G E+GRQ H ++ + G N ++ +L+D+Y K G Sbjct: 258 MKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 315 Score = 74.7 bits (182), Expect = 1e-11 Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 2/108 (1%) Frame = +3 Query: 42 YFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITM 221 Y G+L +A +FE++ DV+ W +I GY +AL LF +M +G PN +TM Sbjct: 311 YSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTM 370 Query: 222 ASVVSACSQLGDFEMGRQAHEFMIE--SGMVMNTIVLTSLLDMYIKGG 359 S++ AC+ LG ++GR H ++ + G+ + + TSL+DMY K G Sbjct: 371 LSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCG 418 Score = 65.1 bits (157), Expect = 1e-08 Identities = 31/91 (34%), Positives = 51/91 (56%) Frame = +3 Query: 24 TKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVK 203 T +I Y GD+ +A VF + + W AMI G+A +G D + +LF +M++ G++ Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ 467 Query: 204 PNPITMASVVSACSQLGDFEMGRQAHEFMIE 296 P+ IT ++SACS G ++GR M + Sbjct: 468 PDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498 Score = 63.5 bits (153), Expect = 3e-08 Identities = 31/97 (31%), Positives = 57/97 (58%) Frame = +3 Query: 69 AQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQ 248 A SVF+ ++ ++++W M G+A + P AL+L+ M G+ PN T V+ +C++ Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146 Query: 249 LGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 F+ G+Q H +++ G ++ V TSL+ MY++ G Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNG 183 >gb|AEP33772.1| organelle transcript processing 82, partial [Draba nemorosa] Length = 526 Score = 109 bits (273), Expect = 3e-22 Identities = 53/118 (44%), Positives = 79/118 (66%) Frame = +3 Query: 6 RDIISHTKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQM 185 RD++S+T +I GY G + +AQ +F+++ DVV W AMISGYA+ G +ALELF M Sbjct: 152 RDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM 211 Query: 186 QETGVKPNPITMASVVSACSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 +T V+P+ TM +VVSAC+Q G E+GRQ H ++ + G N ++ +L+D+Y K G Sbjct: 212 MKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 269 Score = 75.1 bits (183), Expect = 1e-11 Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 2/108 (1%) Frame = +3 Query: 42 YFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITM 221 Y G++ +A +FE + DV+ W +I GY +AL LF +M +G PN +TM Sbjct: 265 YSKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTM 324 Query: 222 ASVVSACSQLGDFEMGRQAHEFMIE--SGMVMNTIVLTSLLDMYIKGG 359 S++ AC+ LG ++GR H ++ + G+ + +LTSL+DMY K G Sbjct: 325 LSILPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCG 372 Score = 63.5 bits (153), Expect = 3e-08 Identities = 31/89 (34%), Positives = 51/89 (57%) Frame = +3 Query: 24 TKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVK 203 T +I Y GD+ +A+ VF+ + + W AMI G+A +G + A +LF +M++ G+ Sbjct: 362 TSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGID 421 Query: 204 PNPITMASVVSACSQLGDFEMGRQAHEFM 290 P+ IT ++SACS G ++GR M Sbjct: 422 PDDITFVGLLSACSHSGMLDLGRHIFRSM 450 Score = 61.6 bits (148), Expect = 1e-07 Identities = 31/97 (31%), Positives = 55/97 (56%) Frame = +3 Query: 69 AQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQ 248 A SVFE ++ ++++W M G+A + P AL L+ M G+ PN T ++ +C++ Sbjct: 41 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK 100 Query: 249 LGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 F G+Q H +++ G ++ V TSL+ MY++ G Sbjct: 101 SKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNG 137 >gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria] Length = 671 Score = 109 bits (273), Expect = 3e-22 Identities = 51/118 (43%), Positives = 78/118 (66%) Frame = +3 Query: 6 RDIISHTKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQM 185 RD++S+T +I GY GD+ SAQ +F+++ DVV W AMISGYA+ G +ALELF +M Sbjct: 128 RDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEM 187 Query: 186 QETGVKPNPITMASVVSACSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 + V+P+ T +V+SAC+ G E+GRQ H ++ + G N ++ +L+D+Y K G Sbjct: 188 MKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCG 245 Score = 71.6 bits (174), Expect = 1e-10 Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 2/108 (1%) Frame = +3 Query: 42 YFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITM 221 Y G++ +A +F+ + DV+ W +I GY +AL LF +M +G PN +TM Sbjct: 241 YSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTM 300 Query: 222 ASVVSACSQLGDFEMGRQAHEFMIE--SGMVMNTIVLTSLLDMYIKGG 359 SV+ AC+ LG ++GR H ++ + G+ + + TSL+DMY K G Sbjct: 301 LSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCG 348 Score = 64.3 bits (155), Expect = 2e-08 Identities = 31/91 (34%), Positives = 51/91 (56%) Frame = +3 Query: 24 TKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVK 203 T +I Y GD+ +A VF + + W AMI G+A +G D + +LF +M++ G++ Sbjct: 338 TSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIE 397 Query: 204 PNPITMASVVSACSQLGDFEMGRQAHEFMIE 296 P+ IT ++SACS G ++GR M + Sbjct: 398 PDDITFVGLLSACSHSGMLDLGRHIFRSMTQ 428 Score = 60.5 bits (145), Expect = 2e-07 Identities = 30/95 (31%), Positives = 54/95 (56%) Frame = +3 Query: 69 AQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPNPITMASVVSACSQ 248 A SVFE ++ + ++W MI G+A + P +L L+ M G+ PN T ++ +C++ Sbjct: 17 ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76 Query: 249 LGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIK 353 F G+Q H +++ G ++ V TSL+ MY++ Sbjct: 77 SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQ 111 >ref|XP_007014360.1| Pentatricopeptide repeat superfamily protein isoform 4 [Theobroma cacao] gi|590581496|ref|XP_007014363.1| Pentatricopeptide repeat superfamily protein isoform 4 [Theobroma cacao] gi|508784723|gb|EOY31979.1| Pentatricopeptide repeat superfamily protein isoform 4 [Theobroma cacao] gi|508784726|gb|EOY31982.1| Pentatricopeptide repeat superfamily protein isoform 4 [Theobroma cacao] Length = 619 Score = 108 bits (271), Expect = 6e-22 Identities = 51/110 (46%), Positives = 77/110 (70%), Gaps = 1/110 (0%) Frame = +3 Query: 33 ILGYFG-IGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPN 209 ++G +G GD VSA+ VF+ +EG DVV W AMI+GYAQNG D+A++LFH M++ GV P+ Sbjct: 269 LIGMYGKCGDFVSARGVFDGMEGKDVVTWNAMITGYAQNGMSDEAIKLFHGMKDAGVIPD 328 Query: 210 PITMASVVSACSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 IT+ V+SAC+ +G ++G++ + + G+ N V T+L+DMY K G Sbjct: 329 KITLVGVLSACASIGALDLGKRIDTYASQRGLQRNIFVSTALVDMYAKCG 378 Score = 91.3 bits (225), Expect = 1e-16 Identities = 47/119 (39%), Positives = 75/119 (63%), Gaps = 2/119 (1%) Frame = +3 Query: 9 DIISHT--KIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQ 182 D+ SHT +I Y G+L SA+ VF+++ D+V W +MISGY++ G ++A+ LF + Sbjct: 159 DVDSHTTHSLITMYARCGELGSARRVFDEISERDLVSWNSMISGYSKMGYANEAVGLFGK 218 Query: 183 MQETGVKPNPITMASVVSACSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 M+E G P+ +T+ SV+ AC LGD +GR F IE + +N+ + ++L+ MY K G Sbjct: 219 MREEGFVPDEMTLVSVLGACGDLGDLSLGRWVEGFAIEHKIKLNSFIASALIGMYGKCG 277 Score = 64.3 bits (155), Expect = 2e-08 Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 3/122 (2%) Frame = +3 Query: 3 ERDIISHTKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQ 182 +R+I T ++ Y G L +AQ VFE + + V W AMIS A +G P +AL LF + Sbjct: 361 QRNIFVSTALVDMYAKCGSLDNAQRVFENMPVKNEVSWNAMISALAFHGRPQEALSLFER 420 Query: 183 MQETG--VKPNPITMASVVSACSQLGDFEMGRQAHEFMIES-GMVMNTIVLTSLLDMYIK 353 M + G PN +T V+SAC G + G Q E M S G+ + ++D+ + Sbjct: 421 MSKEGRDACPNDVTFVGVLSACVHAGLVDEGWQYFELMNSSYGLTPKIEHCSCMVDLLAR 480 Query: 354 GG 359 G Sbjct: 481 AG 482 >ref|XP_007014358.1| Pentatricopeptide repeat superfamily protein isoform 2 [Theobroma cacao] gi|590581482|ref|XP_007014359.1| Pentatricopeptide repeat superfamily protein isoform 2 [Theobroma cacao] gi|590581490|ref|XP_007014361.1| Pentatricopeptide repeat superfamily protein isoform 2 [Theobroma cacao] gi|590581493|ref|XP_007014362.1| Pentatricopeptide repeat superfamily protein isoform 2 [Theobroma cacao] gi|508784721|gb|EOY31977.1| Pentatricopeptide repeat superfamily protein isoform 2 [Theobroma cacao] gi|508784722|gb|EOY31978.1| Pentatricopeptide repeat superfamily protein isoform 2 [Theobroma cacao] gi|508784724|gb|EOY31980.1| Pentatricopeptide repeat superfamily protein isoform 2 [Theobroma cacao] gi|508784725|gb|EOY31981.1| Pentatricopeptide repeat superfamily protein isoform 2 [Theobroma cacao] Length = 565 Score = 108 bits (271), Expect = 6e-22 Identities = 51/110 (46%), Positives = 77/110 (70%), Gaps = 1/110 (0%) Frame = +3 Query: 33 ILGYFG-IGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPN 209 ++G +G GD VSA+ VF+ +EG DVV W AMI+GYAQNG D+A++LFH M++ GV P+ Sbjct: 215 LIGMYGKCGDFVSARGVFDGMEGKDVVTWNAMITGYAQNGMSDEAIKLFHGMKDAGVIPD 274 Query: 210 PITMASVVSACSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 IT+ V+SAC+ +G ++G++ + + G+ N V T+L+DMY K G Sbjct: 275 KITLVGVLSACASIGALDLGKRIDTYASQRGLQRNIFVSTALVDMYAKCG 324 Score = 91.3 bits (225), Expect = 1e-16 Identities = 47/119 (39%), Positives = 75/119 (63%), Gaps = 2/119 (1%) Frame = +3 Query: 9 DIISHT--KIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQ 182 D+ SHT +I Y G+L SA+ VF+++ D+V W +MISGY++ G ++A+ LF + Sbjct: 105 DVDSHTTHSLITMYARCGELGSARRVFDEISERDLVSWNSMISGYSKMGYANEAVGLFGK 164 Query: 183 MQETGVKPNPITMASVVSACSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 M+E G P+ +T+ SV+ AC LGD +GR F IE + +N+ + ++L+ MY K G Sbjct: 165 MREEGFVPDEMTLVSVLGACGDLGDLSLGRWVEGFAIEHKIKLNSFIASALIGMYGKCG 223 Score = 64.3 bits (155), Expect = 2e-08 Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 3/122 (2%) Frame = +3 Query: 3 ERDIISHTKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQ 182 +R+I T ++ Y G L +AQ VFE + + V W AMIS A +G P +AL LF + Sbjct: 307 QRNIFVSTALVDMYAKCGSLDNAQRVFENMPVKNEVSWNAMISALAFHGRPQEALSLFER 366 Query: 183 MQETG--VKPNPITMASVVSACSQLGDFEMGRQAHEFMIES-GMVMNTIVLTSLLDMYIK 353 M + G PN +T V+SAC G + G Q E M S G+ + ++D+ + Sbjct: 367 MSKEGRDACPNDVTFVGVLSACVHAGLVDEGWQYFELMNSSYGLTPKIEHCSCMVDLLAR 426 Query: 354 GG 359 G Sbjct: 427 AG 428 >ref|XP_007014357.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma cacao] gi|508784720|gb|EOY31976.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma cacao] Length = 656 Score = 108 bits (271), Expect = 6e-22 Identities = 51/110 (46%), Positives = 77/110 (70%), Gaps = 1/110 (0%) Frame = +3 Query: 33 ILGYFG-IGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQMQETGVKPN 209 ++G +G GD VSA+ VF+ +EG DVV W AMI+GYAQNG D+A++LFH M++ GV P+ Sbjct: 306 LIGMYGKCGDFVSARGVFDGMEGKDVVTWNAMITGYAQNGMSDEAIKLFHGMKDAGVIPD 365 Query: 210 PITMASVVSACSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 IT+ V+SAC+ +G ++G++ + + G+ N V T+L+DMY K G Sbjct: 366 KITLVGVLSACASIGALDLGKRIDTYASQRGLQRNIFVSTALVDMYAKCG 415 Score = 91.3 bits (225), Expect = 1e-16 Identities = 47/119 (39%), Positives = 75/119 (63%), Gaps = 2/119 (1%) Frame = +3 Query: 9 DIISHT--KIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQ 182 D+ SHT +I Y G+L SA+ VF+++ D+V W +MISGY++ G ++A+ LF + Sbjct: 196 DVDSHTTHSLITMYARCGELGSARRVFDEISERDLVSWNSMISGYSKMGYANEAVGLFGK 255 Query: 183 MQETGVKPNPITMASVVSACSQLGDFEMGRQAHEFMIESGMVMNTIVLTSLLDMYIKGG 359 M+E G P+ +T+ SV+ AC LGD +GR F IE + +N+ + ++L+ MY K G Sbjct: 256 MREEGFVPDEMTLVSVLGACGDLGDLSLGRWVEGFAIEHKIKLNSFIASALIGMYGKCG 314 Score = 64.3 bits (155), Expect = 2e-08 Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 3/122 (2%) Frame = +3 Query: 3 ERDIISHTKIILGYFGIGDLVSAQSVFEKVEGVDVVLWTAMISGYAQNGAPDKALELFHQ 182 +R+I T ++ Y G L +AQ VFE + + V W AMIS A +G P +AL LF + Sbjct: 398 QRNIFVSTALVDMYAKCGSLDNAQRVFENMPVKNEVSWNAMISALAFHGRPQEALSLFER 457 Query: 183 MQETG--VKPNPITMASVVSACSQLGDFEMGRQAHEFMIES-GMVMNTIVLTSLLDMYIK 353 M + G PN +T V+SAC G + G Q E M S G+ + ++D+ + Sbjct: 458 MSKEGRDACPNDVTFVGVLSACVHAGLVDEGWQYFELMNSSYGLTPKIEHCSCMVDLLAR 517 Query: 354 GG 359 G Sbjct: 518 AG 519