BLASTX nr result

ID: Akebia22_contig00025623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00025623
         (323 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]       110   2e-22
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th...   108   8e-22
ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis...   101   1e-19
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      100   3e-19
ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-li...    99   6e-19
emb|CBI26820.3| unnamed protein product [Vitis vinifera]               96   4e-18
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...    96   4e-18
ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Caps...    96   5e-18
gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thali...    96   5e-18
ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis tha...    96   5e-18
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]       96   7e-18
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...    95   9e-18
gb|EMS66194.1| RNA-dependent RNA polymerase 1 [Triticum urartu]        94   3e-17
ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutr...    92   6e-17
gb|ACH53361.1| RNA-directed RNA polymerase 1b [Hordeum vulgare]        92   6e-17
gb|AAR91036.1| RNA-directed RNA polymerase 1 [Hordeum vulgare su...    92   6e-17
gb|EMT27792.1| Putative RNA-dependent RNA polymerase 1 [Aegilops...    92   8e-17
emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis hall...    92   1e-16
ref|XP_002454320.1| hypothetical protein SORBIDRAFT_04g028630 [S...    92   1e-16
ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis ...    91   2e-16

>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
          Length = 1133

 Score =  110 bits (275), Expect = 2e-22
 Identities = 56/107 (52%), Positives = 76/107 (71%)
 Frame = +1

Query: 1   IQVSGFPSDVSKETVKDFLEKHIGKGSIIALKIRQTKKIRSNSSAYAIVQFESIKNAKDM 180
           IQ+SGFPS VS E+VK+FLE H G+G++ A+KIR TK     S +YAIVQF +++ A+ +
Sbjct: 5   IQLSGFPSHVSAESVKEFLEGHTGRGTVYAIKIRPTKN--GGSRSYAIVQFMTVETAELI 62

Query: 181 SSLIYRRLYFGTSYLKVRQMKDDVVPKPRVLMLSVEATALHFGCQIS 321
             L   RL++G SYL  R M+ D+VPKPR  + S++   LHFGCQIS
Sbjct: 63  IRLANPRLWYGRSYLLARVMERDIVPKPRATLYSLQNVTLHFGCQIS 109


>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
           gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
           polymerase 1 isoform 1 [Theobroma cacao]
           gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
           polymerase 1 isoform 1 [Theobroma cacao]
           gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
           gi|508709488|gb|EOY01385.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
           gi|508709489|gb|EOY01386.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
          Length = 1109

 Score =  108 bits (270), Expect = 8e-22
 Identities = 56/107 (52%), Positives = 75/107 (70%)
 Frame = +1

Query: 1   IQVSGFPSDVSKETVKDFLEKHIGKGSIIALKIRQTKKIRSNSSAYAIVQFESIKNAKDM 180
           IQVS FPS+V  E VK FLE + GK ++ ALKIRQ K   +   AYAIVQF    +A+ +
Sbjct: 5   IQVSRFPSNVHAEEVKTFLELYTGKETVYALKIRQQK---NGGRAYAIVQFTKSTDAELI 61

Query: 181 SSLIYRRLYFGTSYLKVRQMKDDVVPKPRVLMLSVEATALHFGCQIS 321
             L  +RLY+G+SYLK R+M++D+VPKPR  + ++E   LHFGCQ+S
Sbjct: 62  IRLTNQRLYYGSSYLKAREMENDIVPKPRTFLHTMEGVTLHFGCQVS 108


>ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
           gi|316989899|gb|ADU77015.1| RNA-dependent RNA polymerase
           1a [Cucumis sativus]
          Length = 1130

 Score =  101 bits (252), Expect = 1e-19
 Identities = 52/107 (48%), Positives = 71/107 (66%)
 Frame = +1

Query: 1   IQVSGFPSDVSKETVKDFLEKHIGKGSIIALKIRQTKKIRSNSSAYAIVQFESIKNAKDM 180
           I +SGFPS V+ + VK+FLE H G G++ A+K+R  K  R     YAIVQF S   A+ +
Sbjct: 5   IHISGFPSHVTADAVKNFLEGHTGPGTVYAIKVRPPK--RGGGRLYAIVQFTSATQAELI 62

Query: 181 SSLIYRRLYFGTSYLKVRQMKDDVVPKPRVLMLSVEATALHFGCQIS 321
            SL  +RL++G+SYLK R  + D+VPKPR  M ++E   L FGCQ+S
Sbjct: 63  ISLANQRLWYGSSYLKARATEVDIVPKPRTYMYTLEELLLCFGCQVS 109


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  100 bits (248), Expect = 3e-19
 Identities = 54/107 (50%), Positives = 73/107 (68%)
 Frame = +1

Query: 1   IQVSGFPSDVSKETVKDFLEKHIGKGSIIALKIRQTKKIRSNSSAYAIVQFESIKNAKDM 180
           IQV GF SDVS   VK FLE + G+ ++ ALKIRQ KK   +  A+AIVQF    +A  +
Sbjct: 5   IQVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHKK---SGRAFAIVQFTRSSDAGLI 61

Query: 181 SSLIYRRLYFGTSYLKVRQMKDDVVPKPRVLMLSVEATALHFGCQIS 321
             L  +RLY+G SYLK R+M+ D+VPKPRV + ++E   ++FGCQ+S
Sbjct: 62  IRLANQRLYYGRSYLKAREMETDIVPKPRVFLHTMERVTVNFGCQVS 108


>ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Fragaria vesca
           subsp. vesca]
          Length = 1119

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 51/107 (47%), Positives = 69/107 (64%)
 Frame = +1

Query: 1   IQVSGFPSDVSKETVKDFLEKHIGKGSIIALKIRQTKKIRSNSSAYAIVQFESIKNAKDM 180
           IQ+ GFPS  + E +K+FLEKH G+GS+ ALK+R  K   S    YAI+QF+SI  A+ +
Sbjct: 5   IQLHGFPSGQTAENIKEFLEKHTGEGSVFALKLRPAK---SGGRFYAIIQFQSISQAEKI 61

Query: 181 SSLIYRRLYFGTSYLKVRQMKDDVVPKPRVLMLSVEATALHFGCQIS 321
            SL   RL++G SYL  R    D+VPKPR  + S+    LH GCQ++
Sbjct: 62  ISLANARLWYGRSYLNARP-AHDIVPKPRTFLHSLRDLVLHVGCQVA 107


>emb|CBI26820.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 48/107 (44%), Positives = 75/107 (70%)
 Frame = +1

Query: 1   IQVSGFPSDVSKETVKDFLEKHIGKGSIIALKIRQTKKIRSNSSAYAIVQFESIKNAKDM 180
           IQV GFPS VS + +K+FLEK+ G+G+I AL+I+Q +     S  +A VQF S + A+ +
Sbjct: 5   IQVYGFPSIVSADEIKEFLEKYTGEGTIEALEIKQPRS--GASMTHAKVQFTSFELAEFI 62

Query: 181 SSLIYRRLYFGTSYLKVRQMKDDVVPKPRVLMLSVEATALHFGCQIS 321
            +L  +++++G +YLK R+M  D++PKPR  + S++   LHFGCQ+S
Sbjct: 63  ITLCKKKVWYGRNYLKAREMDLDIIPKPRAFLHSMDRITLHFGCQMS 109


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 48/107 (44%), Positives = 75/107 (70%)
 Frame = +1

Query: 1   IQVSGFPSDVSKETVKDFLEKHIGKGSIIALKIRQTKKIRSNSSAYAIVQFESIKNAKDM 180
           IQV GFPS VS + +K+FLEK+ G+G+I AL+I+Q +     S  +A VQF S + A+ +
Sbjct: 5   IQVYGFPSIVSADEIKEFLEKYTGEGTIEALEIKQPRS--GASMTHAKVQFTSFELAEFI 62

Query: 181 SSLIYRRLYFGTSYLKVRQMKDDVVPKPRVLMLSVEATALHFGCQIS 321
            +L  +++++G +YLK R+M  D++PKPR  + S++   LHFGCQ+S
Sbjct: 63  ITLCKKKVWYGRNYLKAREMDLDIIPKPRAFLHSMDRITLHFGCQMS 109


>ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Capsella rubella]
           gi|482575337|gb|EOA39524.1| hypothetical protein
           CARUB_v10008144mg [Capsella rubella]
          Length = 1107

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 48/107 (44%), Positives = 71/107 (66%)
 Frame = +1

Query: 1   IQVSGFPSDVSKETVKDFLEKHIGKGSIIALKIRQTKKIRSNSSAYAIVQFESIKNAKDM 180
           IQV GFP  V+ + VK FLE+  G G++ A+K+RQ K  R     +AIVQF S ++A+ +
Sbjct: 5   IQVFGFPVGVNTDDVKIFLERLTGSGTVYAIKVRQPK--RGGPRVFAIVQFTSERHARLI 62

Query: 181 SSLIYRRLYFGTSYLKVRQMKDDVVPKPRVLMLSVEATALHFGCQIS 321
            ++   RLY+G SYLK  +M+ D+VPKPR  + S+    ++FGCQ+S
Sbjct: 63  ITMAAERLYYGRSYLKAFEMEQDIVPKPRASLHSISNLKMYFGCQVS 109


>gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
          Length = 1107

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 48/107 (44%), Positives = 69/107 (64%)
 Frame = +1

Query: 1   IQVSGFPSDVSKETVKDFLEKHIGKGSIIALKIRQTKKIRSNSSAYAIVQFESIKNAKDM 180
           IQV GFP+ VS E VK FLE+  G G++ A+K+RQ KK       YAIVQF S ++ + +
Sbjct: 5   IQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKK--GGPRVYAIVQFTSERHTRLI 62

Query: 181 SSLIYRRLYFGTSYLKVRQMKDDVVPKPRVLMLSVEATALHFGCQIS 321
            +    RLY+G SYLK  +++ D+VPKPR  + ++    + FGCQ+S
Sbjct: 63  ITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVS 109


>ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
           gi|75335341|sp|Q9LQV2.1|RDR1_ARATH RecName:
           Full=RNA-dependent RNA polymerase 1; Short=AtRDRP1;
           AltName: Full=RNA-directed RNA polymerase 1
           gi|8778232|gb|AAF79241.1|AC006917_26 F10B6.19
           [Arabidopsis thaliana] gi|110737376|dbj|BAF00633.1|
           putative RNA-directed RNA polymerase [Arabidopsis
           thaliana] gi|332191105|gb|AEE29226.1| RNA-dependent RNA
           polymerase 1 [Arabidopsis thaliana]
          Length = 1107

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 48/107 (44%), Positives = 69/107 (64%)
 Frame = +1

Query: 1   IQVSGFPSDVSKETVKDFLEKHIGKGSIIALKIRQTKKIRSNSSAYAIVQFESIKNAKDM 180
           IQV GFP+ VS E VK FLE+  G G++ A+K+RQ KK       YAIVQF S ++ + +
Sbjct: 5   IQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKK--GGPRVYAIVQFTSERHTRLI 62

Query: 181 SSLIYRRLYFGTSYLKVRQMKDDVVPKPRVLMLSVEATALHFGCQIS 321
            +    RLY+G SYLK  +++ D+VPKPR  + ++    + FGCQ+S
Sbjct: 63  ITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVS 109


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 52/107 (48%), Positives = 71/107 (66%)
 Frame = +1

Query: 1   IQVSGFPSDVSKETVKDFLEKHIGKGSIIALKIRQTKKIRSNSSAYAIVQFESIKNAKDM 180
           IQV GF SDVS   VK FLE + G+ ++ ALKIRQ KK   +  A+AIVQF    +A  +
Sbjct: 5   IQVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHKK---SGRAFAIVQFTRSSDAGLI 61

Query: 181 SSLIYRRLYFGTSYLKVRQMKDDVVPKPRVLMLSVEATALHFGCQIS 321
             L  +RLY+G SYLK R+M+ D+VPKPRV + ++E   ++F C +S
Sbjct: 62  IRLANQRLYYGRSYLKAREMETDIVPKPRVFLHTMERVTVNFDCHVS 108


>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 53/109 (48%), Positives = 70/109 (64%), Gaps = 2/109 (1%)
 Frame = +1

Query: 1   IQVSGFPSDVSKETVKDFLEKHIGKGSIIALKIRQTKKIRSNSSAYAIVQFESIKNAKDM 180
           IQV GFP+ V+ E VKDFLE   G G++ ALK+R  KK       YAIVQF + + A  +
Sbjct: 5   IQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKK--GVGRLYAIVQFTTKEAADTI 62

Query: 181 SSLIYR--RLYFGTSYLKVRQMKDDVVPKPRVLMLSVEATALHFGCQIS 321
            SL  R  +L++G SYL  R+M+ D VP+PR  M ++E   LHFGC+IS
Sbjct: 63  ISLACRTEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKIS 111


>gb|EMS66194.1| RNA-dependent RNA polymerase 1 [Triticum urartu]
          Length = 1252

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 47/105 (44%), Positives = 71/105 (67%), Gaps = 1/105 (0%)
 Frame = +1

Query: 1   IQVSGFPSDVSKETVKDFLEKHIGKGSIIALKIRQTKKIRSNSSAYAIVQFESIKNAKDM 180
           IQVSGFPS V+ + VKD LEK +G G++ A+K+R  K I +NS ++AIVQF+S  +A  +
Sbjct: 6   IQVSGFPSTVNADHVKDLLEKIVGTGNVFAIKLRPPKNISANSKSFAIVQFQSEAHASLV 65

Query: 181 SSLIYRR-LYFGTSYLKVRQMKDDVVPKPRVLMLSVEATALHFGC 312
            +   R  L  G+++LK R  + D+VP+PR  + +++   LHFGC
Sbjct: 66  LNAARRNALRSGSNHLKARYAERDIVPRPRTTIFNLQDATLHFGC 110


>ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutrema salsugineum]
           gi|557094740|gb|ESQ35322.1| hypothetical protein
           EUTSA_v10006629mg [Eutrema salsugineum]
          Length = 1108

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 45/107 (42%), Positives = 69/107 (64%)
 Frame = +1

Query: 1   IQVSGFPSDVSKETVKDFLEKHIGKGSIIALKIRQTKKIRSNSSAYAIVQFESIKNAKDM 180
           I+V GFP  VS E VK+FLE+  G G++ A+K+RQ KK       YAIVQF + ++A+ +
Sbjct: 5   IRVFGFPGGVSGEEVKNFLERETGSGTVYAIKVRQPKK--GGPRVYAIVQFTNERHARWI 62

Query: 181 SSLIYRRLYFGTSYLKVRQMKDDVVPKPRVLMLSVEATALHFGCQIS 321
            +     LY+G SYLK  +++ D+VPKPR  +  +    ++FGCQ++
Sbjct: 63  ITRAEEGLYYGRSYLKASEVEQDIVPKPRASLHKISDLKIYFGCQVT 109


>gb|ACH53361.1| RNA-directed RNA polymerase 1b [Hordeum vulgare]
          Length = 1115

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 46/105 (43%), Positives = 70/105 (66%), Gaps = 1/105 (0%)
 Frame = +1

Query: 1   IQVSGFPSDVSKETVKDFLEKHIGKGSIIALKIRQTKKIRSNSSAYAIVQFESIKNAKDM 180
           +QVSGFPS V+ + VKD LE+ +G G++ A+K+R  K I +NS ++AIVQF+S  +A  +
Sbjct: 6   LQVSGFPSTVNADHVKDLLEQIVGTGNVFAVKLRPPKNISANSRSFAIVQFQSEAHASLV 65

Query: 181 SSLIYRR-LYFGTSYLKVRQMKDDVVPKPRVLMLSVEATALHFGC 312
            +   R  L  G+ YLK R  + D+VP+PR  + +++   LHFGC
Sbjct: 66  LNAAQRNALRSGSHYLKARYAERDIVPRPRTTIFNLQGAKLHFGC 110


>gb|AAR91036.1| RNA-directed RNA polymerase 1 [Hordeum vulgare subsp. vulgare]
          Length = 1115

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 46/105 (43%), Positives = 70/105 (66%), Gaps = 1/105 (0%)
 Frame = +1

Query: 1   IQVSGFPSDVSKETVKDFLEKHIGKGSIIALKIRQTKKIRSNSSAYAIVQFESIKNAKDM 180
           +QVSGFPS V+ + VKD LE+ +G G++ A+K+R  K I +NS ++AIVQF+S  +A  +
Sbjct: 6   LQVSGFPSTVNADHVKDLLEQIVGTGNVFAVKLRPPKNISANSRSFAIVQFQSEAHASLV 65

Query: 181 SSLIYRR-LYFGTSYLKVRQMKDDVVPKPRVLMLSVEATALHFGC 312
            +   R  L  G+ YLK R  + D+VP+PR  + +++   LHFGC
Sbjct: 66  LNAAQRNALRSGSHYLKARYAERDIVPRPRTTIFNLQGAKLHFGC 110


>gb|EMT27792.1| Putative RNA-dependent RNA polymerase 1 [Aegilops tauschii]
          Length = 1144

 Score = 92.0 bits (227), Expect = 8e-17
 Identities = 46/105 (43%), Positives = 71/105 (67%), Gaps = 1/105 (0%)
 Frame = +1

Query: 1   IQVSGFPSDVSKETVKDFLEKHIGKGSIIALKIRQTKKIRSNSSAYAIVQFESIKNAKDM 180
           IQVSGFPS V+ + VKD LE+ +G G++ A+K+R  K I +NS ++AIVQF+S  +A  +
Sbjct: 6   IQVSGFPSTVNADHVKDLLEQIVGTGNVFAIKLRPPKNISANSKSFAIVQFQSEAHASLV 65

Query: 181 SSLIYRR-LYFGTSYLKVRQMKDDVVPKPRVLMLSVEATALHFGC 312
            +   R  L  G+++LK R  + D+VP+PR  + +++   LHFGC
Sbjct: 66  LNAARRNALRSGSNHLKARYAERDIVPRPRTTIFNLQDATLHFGC 110


>emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis halleri subsp. halleri]
          Length = 1107

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 47/108 (43%), Positives = 69/108 (63%), Gaps = 1/108 (0%)
 Frame = +1

Query: 1   IQVSGFPSDVSKETVKDFLEKHIGKGSIIALKIRQTKKIRSNSSAYAIVQFESIKNAKDM 180
           IQV GFP+ VS E VK FLE+  G G++ A+K+RQ KK       +AIVQF + + A+ +
Sbjct: 5   IQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKK--GGPRVFAIVQFTNERYARQI 62

Query: 181 -SSLIYRRLYFGTSYLKVRQMKDDVVPKPRVLMLSVEATALHFGCQIS 321
            +    RRLY+G SYL   ++  D+VPKPR  + ++    ++FGCQ+S
Sbjct: 63  ITGAAERRLYYGRSYLNAFEVDQDIVPKPRASLHNISGLKMYFGCQVS 110


>ref|XP_002454320.1| hypothetical protein SORBIDRAFT_04g028630 [Sorghum bicolor]
           gi|241934151|gb|EES07296.1| hypothetical protein
           SORBIDRAFT_04g028630 [Sorghum bicolor]
          Length = 1114

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 49/107 (45%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
 Frame = +1

Query: 1   IQVSGFPSDVSKETVKDFLEKHIGKGSIIALKIRQTKKIRSNSSAYAIVQFESIKNAKDM 180
           IQV GF    S E+VK+FLE+  G G+I ALK+R  + I +NS A+AIVQF+S ++A  +
Sbjct: 6   IQVHGFALTDSAESVKEFLERISGAGTIYALKLRHPRNISANSRAFAIVQFQSQESASLV 65

Query: 181 SSLIYRRL-YFGTSYLKVRQMKDDVVPKPRVLMLSVEATALHFGCQI 318
             ++ R     G  YLK R    D+VP+PR+ M S+E T LH GC +
Sbjct: 66  EDVVQRNAPRIGRFYLKTRPADRDIVPRPRIPMFSLEDTVLHLGCLV 112


>ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297338672|gb|EFH69089.1| RNA-dependent RNA polymerase
           1 [Arabidopsis lyrata subsp. lyrata]
          Length = 1107

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 47/108 (43%), Positives = 69/108 (63%), Gaps = 1/108 (0%)
 Frame = +1

Query: 1   IQVSGFPSDVSKETVKDFLEKHIGKGSIIALKIRQTKKIRSNSSAYAIVQFESIKNAKDM 180
           IQV GFP+ VS E VK FLE+  G G++ A+K+RQ KK       +AIVQF +   A+ +
Sbjct: 5   IQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKK--GGPRVFAIVQFTNEIYARQI 62

Query: 181 -SSLIYRRLYFGTSYLKVRQMKDDVVPKPRVLMLSVEATALHFGCQIS 321
            +    RRLY+G SYL   +++ D+VPKPR  + ++    ++FGCQ+S
Sbjct: 63  ITGAAERRLYYGRSYLNAFEVEQDIVPKPRASLHNISGLKMYFGCQVS 110


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