BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00025614
         (1445 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containi...   675   0.0  
ref|XP_006432168.1| hypothetical protein CICLE_v10000448mg [Citr...   672   0.0  
ref|XP_007204096.1| hypothetical protein PRUPE_ppa002338mg [Prun...   669   0.0  
ref|XP_002517667.1| pentatricopeptide repeat-containing protein,...   664   0.0  
ref|XP_004502949.1| PREDICTED: pentatricopeptide repeat-containi...   657   0.0  
ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containi...   647   0.0  
ref|XP_003602631.1| Pentatricopeptide repeat-containing protein ...   644   0.0  
ref|XP_007137795.1| hypothetical protein PHAVU_009G156000g [Phas...   642   0.0  
ref|XP_007044258.1| Pentatricopeptide repeat (PPR) superfamily p...   641   0.0  
emb|CBI38165.3| unnamed protein product [Vitis vinifera]              635   e-179
ref|XP_002310520.1| pentatricopeptide repeat-containing family p...   622   e-175
ref|XP_002883803.1| pentatricopeptide repeat-containing protein ...   619   e-175
ref|NP_178983.1| pentatricopeptide repeat-containing protein [Ar...   614   e-173
ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containi...   612   e-172
ref|XP_006297108.1| hypothetical protein CARUB_v10013108mg [Caps...   612   e-172
ref|XP_006297107.1| hypothetical protein CARUB_v10013108mg [Caps...   612   e-172
ref|XP_006409682.1| hypothetical protein EUTSA_v10022582mg [Eutr...   604   e-170
gb|EXC23679.1| hypothetical protein L484_015589 [Morus notabilis]     586   e-164
ref|XP_006359274.1| PREDICTED: pentatricopeptide repeat-containi...   573   e-161
ref|XP_004237174.1| PREDICTED: pentatricopeptide repeat-containi...   572   e-160

>ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
            [Vitis vinifera]
          Length = 684

 Score =  675 bits (1742), Expect = 0.0
 Identities = 330/454 (72%), Positives = 382/454 (84%)
 Frame = +2

Query: 83   VSDLHLPDSTLFANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQNRLIDVYAKCGCL 262
            V DL+LP+S+ FA LL  CL+S+S R    VHAR++ TQF+ EIFIQNRLIDVY KC CL
Sbjct: 7    VRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCL 66

Query: 263  NDAHNLFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHD 442
            +DA  LFDRMPQ+NTFTWNS+IS  TKSGFLDEA RLF  MPEPD+CSWNSMVSGFAQHD
Sbjct: 67   DDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHD 126

Query: 443  RLEEALGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSPHSSDVYMGS 622
            R EE+L  FV+MH EDF+LNEYS+ SALSACAGLMDL MGTQ+H  +SKS +S+DVYMGS
Sbjct: 127  RFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGS 186

Query: 623  ALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIEP 802
            ALIDMYSKCGSV  A +VF  MIE+N+V+WNSLITCYEQNGPA+EA+  FVRMM+ G+EP
Sbjct: 187  ALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEP 246

Query: 803  DEVTLASVVSACATLSAIEEGSQIHAHVIRSDKFRDDLVLSNALVDMYAKCSKIKEARLV 982
            DEVTLASVVSACA+L A++EG QIHA V++++KFRDDLVL NALVDMYAKCSK+ EAR V
Sbjct: 247  DEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRV 306

Query: 983  FDRMPMRNVVSETSMVSGYAKSMSVKVARLMFTKMTEKNVISWNALIAGYSQNGENEAAL 1162
            FDRM +RNVVSETSMVSGYA++ SVK AR MF+KMT++NV+SWNALIAGY+QNGENE AL
Sbjct: 307  FDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEAL 366

Query: 1163 DLFCLLKKESVCPTHYTFGNIXXXXXXXXXXQLGKQAHTHVVKHGFRFVSGPKSDIFVGN 1342
             LF LLK+ES+ PTHYTFGN+           LG+QAHTHV+K GF F SG +SDIFVGN
Sbjct: 367  RLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGN 426

Query: 1343 SLVDMYTKCGSIEDGYRVFETMVERDRVSWNAMI 1444
            SL+DMY KCGSIEDG RVFE M ERD VSWNA+I
Sbjct: 427  SLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAII 460



 Score =  193 bits (491), Expect = 1e-46
 Identities = 109/353 (30%), Positives = 195/353 (55%), Gaps = 14/353 (3%)
 Frame = +2

Query: 101  PDSTLFANLLQLCLKSKSPRDVHRVHARLIKT-QFASEIFIQNRLIDVYAKCGCLNDAHN 277
            PD    A+++  C    + ++  ++HAR++KT +F  ++ + N L+D+YAKC  +N+A  
Sbjct: 246  PDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARR 305

Query: 278  LFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEA 457
            +FDRM  +N  +  S++S + ++  +  A  +F  M + +  SWN++++G+ Q+   EEA
Sbjct: 306  VFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEA 365

Query: 458  LGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISK------SPHSSDVYMG 619
            L  F  +  E      Y++ + LSACA L DL +G Q H  + K      S   SD+++G
Sbjct: 366  LRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVG 425

Query: 620  SALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIE 799
            ++LIDMY KCGS+ D  +VF+ M E++ VSWN++I  Y QNG   EA++ F +M+  G +
Sbjct: 426  NSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEK 485

Query: 800  PDEVTLASVVSACATLSAIEEG------SQIHAHVIRSDKFRDDLVLSNALVDMYAKCSK 961
            PD VT+  V+ AC+    +EEG       + H  +   D +         +VD+  +   
Sbjct: 486  PDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHY-------TCMVDLLGRAGC 538

Query: 962  IKEARLVFDRMPMR-NVVSETSMVSGYAKSMSVKVARLMFTKMTEKNVISWNA 1117
            + EA+ + + MP+  + V   S+++      ++++ +    K+ E  +  WN+
Sbjct: 539  LNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLE--IDPWNS 589



 Score =  190 bits (482), Expect = 2e-45
 Identities = 136/484 (28%), Positives = 216/484 (44%), Gaps = 41/484 (8%)
 Frame = +2

Query: 116  FANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQNRLIDVYAKCGCLNDAHNLFDRMP 295
            F + L  C          +VHA + K+++++++++ + LID+Y+KCG +  A  +F  M 
Sbjct: 150  FGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMI 209

Query: 296  QKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEALGTFVE 475
            ++N  T                               WNS+++ + Q+    EAL  FV 
Sbjct: 210  ERNLVT-------------------------------WNSLITCYEQNGPASEALEVFVR 238

Query: 476  MHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKS-PHSSDVYMGSALIDMYSKCG 652
            M       +E + AS +SACA L  LK G QIH  + K+     D+ +G+AL+DMY+KC 
Sbjct: 239  MMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCS 298

Query: 653  SVLDARKVFD-------------------------------SMIEKNIVSWNSLITCYEQ 739
             V +AR+VFD                                M ++N+VSWN+LI  Y Q
Sbjct: 299  KVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQ 358

Query: 740  NGPANEAIRFFVRMMEFGIEPDEVTLASVVSACATLSAIEEGSQIHAHVIRSD-KFRD-- 910
            NG   EA+R F  +    I P   T  +++SACA L+ +  G Q H HV++   +F+   
Sbjct: 359  NGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGA 418

Query: 911  --DLVLSNALVDMYAKCSKIKEARLVFDRMPMRNVVSETSMVSGYAKSMSVKVARLMFTK 1084
              D+ + N+L+DMY KC  I++   VF+                               K
Sbjct: 419  ESDIFVGNSLIDMYMKCGSIEDGSRVFE-------------------------------K 447

Query: 1085 MTEKNVISWNALIAGYSQNGENEAALDLFCLLKKESVC---PTHYTFGNIXXXXXXXXXX 1255
            M E++ +SWNA+I GY+QNG    AL +F   +K  VC   P H T   +          
Sbjct: 448  MKERDCVSWNAIIVGYAQNGYGAEALQIF---RKMLVCGEKPDHVTMIGVLCACSHAGLV 504

Query: 1256 QLGKQAHTHVVKHGFRFVSGPKSDIFVGNSLVDMYTKCGSIEDGYRVFETM-VERDRVSW 1432
            + G+     + +HG      P  D +    +VD+  + G + +   + E M V  D V W
Sbjct: 505  EEGRHYFFSMEEHGLI----PLKDHY--TCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVW 558

Query: 1433 NAMI 1444
             +++
Sbjct: 559  GSLL 562


>ref|XP_006432168.1| hypothetical protein CICLE_v10000448mg [Citrus clementina]
            gi|568821173|ref|XP_006465064.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At2g13600-like [Citrus sinensis]
            gi|557534290|gb|ESR45408.1| hypothetical protein
            CICLE_v10000448mg [Citrus clementina]
          Length = 705

 Score =  672 bits (1735), Expect = 0.0
 Identities = 334/459 (72%), Positives = 379/459 (82%)
 Frame = +2

Query: 68   SVWRQVSDLHLPDSTLFANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQNRLIDVYA 247
            SV + V DL   DS+ FA LL  CL+SKS  D  RVHAR+IK+QFASEIFIQNRLIDVYA
Sbjct: 6    SVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA 65

Query: 248  KCGCLNDAHNLFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSG 427
            KCGCL  A  +FD+M  KN FTWNSII+   K GF+D+A RLF  MPE D+CSWNSMVSG
Sbjct: 66   KCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSG 125

Query: 428  FAQHDRLEEALGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSPHSSD 607
            FAQHDR  EALG FV+MH E+F LNEYS+ SALSACAG +D KMGTQ+H  +SKS +SSD
Sbjct: 126  FAQHDRFSEALGYFVKMHSENFALNEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD 185

Query: 608  VYMGSALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMME 787
            VYMGSALIDMY KCG V  AR+VFD M E+NIVSWNSLITCYEQNGPA++A+  FVRMM 
Sbjct: 186  VYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA 245

Query: 788  FGIEPDEVTLASVVSACATLSAIEEGSQIHAHVIRSDKFRDDLVLSNALVDMYAKCSKIK 967
             GIEPDEVTLASVVSACA+L+A +EG QIHA ++R +K R+DLVL NALVDMYAKC K+ 
Sbjct: 246  SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305

Query: 968  EARLVFDRMPMRNVVSETSMVSGYAKSMSVKVARLMFTKMTEKNVISWNALIAGYSQNGE 1147
            EAR VFDRMP+RNVVSETSMVSGYAK+ SVK ARLMFTKM E+NV+SWNALIAGY+QNGE
Sbjct: 306  EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE 365

Query: 1148 NEAALDLFCLLKKESVCPTHYTFGNIXXXXXXXXXXQLGKQAHTHVVKHGFRFVSGPKSD 1327
            NE AL LF LLK+ESVCPTHYTFGN+          QLG+QAHTHVVKHG RF+SG +SD
Sbjct: 366  NEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425

Query: 1328 IFVGNSLVDMYTKCGSIEDGYRVFETMVERDRVSWNAMI 1444
            IFVGNSL+DMY KCGS+E+G R+FETMVERD VSWNAMI
Sbjct: 426  IFVGNSLIDMYMKCGSVEEGCRIFETMVERDWVSWNAMI 464



 Score =  201 bits (510), Expect = 9e-49
 Identities = 103/308 (33%), Positives = 180/308 (58%), Gaps = 7/308 (2%)
 Frame = +2

Query: 101  PDSTLFANLLQLCLKSKSPRDVHRVHARLIKTQ-FASEIFIQNRLIDVYAKCGCLNDAHN 277
            PD    A+++  C    + ++  ++HARL++ +   +++ + N L+D+YAKCG LN+A  
Sbjct: 250  PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309

Query: 278  LFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEA 457
            +FDRMP +N  +  S++S + K+  +  A  +F  M E +  SWN++++G+ Q+   EEA
Sbjct: 310  VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369

Query: 458  LGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISK------SPHSSDVYMG 619
            LG F  +  E      Y++ + L+ACA L DL++G Q H  + K      S   SD+++G
Sbjct: 370  LGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429

Query: 620  SALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIE 799
            ++LIDMY KCGSV +  ++F++M+E++ VSWN++I    QNG   EA+  F +M+  G +
Sbjct: 430  NSLIDMYMKCGSVEEGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489

Query: 800  PDEVTLASVVSACATLSAIEEGSQIHAHVIRSDKFRDDLVLSNALVDMYAKCSKIKEARL 979
            PD VT+  V+ AC+    +EEG +  + + +             +VD+  +   + EA+ 
Sbjct: 490  PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKT 549

Query: 980  VFDRMPMR 1003
            + + MPM+
Sbjct: 550  LIEAMPMQ 557



 Score =  181 bits (458), Expect = 9e-43
 Identities = 133/485 (27%), Positives = 219/485 (45%), Gaps = 42/485 (8%)
 Frame = +2

Query: 116  FANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQNRLIDVYAKCGCLNDAHNLFDRMP 295
            F + L  C  S   +   +VHA L K++++S++++ + LID+Y KCG ++ A        
Sbjct: 154  FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCAR------- 206

Query: 296  QKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEALGTFVE 475
                                    R+F  M E +  SWNS+++ + Q+    +AL  FV 
Sbjct: 207  ------------------------RVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242

Query: 476  MHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSPH-SSDVYMGSALIDMYSKCG 652
            M       +E + AS +SACA L   K G QIH  + +     +D+ +G+AL+DMY+KCG
Sbjct: 243  MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302

Query: 653  SVLDARKVFD-------------------------------SMIEKNIVSWNSLITCYEQ 739
             + +AR VFD                                M+E+N+VSWN+LI  Y Q
Sbjct: 303  KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362

Query: 740  NGPANEAIRFFVRMMEFGIEPDEVTLASVVSACATLSAIEEGSQIHAHVIRSD-KF---- 904
            NG   EA+  F  +    + P   T  ++++ACA L+ ++ G Q H HV++   +F    
Sbjct: 363  NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422

Query: 905  RDDLVLSNALVDMYAKCSKIKEARLVFDRMPMRNVVSETSMVSGYAKSMSVKVARLMFTK 1084
              D+ + N+L+DMY KC  ++E   +F+                                
Sbjct: 423  ESDIFVGNSLIDMYMKCGSVEEGCRIFET------------------------------- 451

Query: 1085 MTEKNVISWNALIAGYSQNGENEAALDLFCLLKKESVC---PTHYTFGNIXXXXXXXXXX 1255
            M E++ +SWNA+I G +QNG    AL LF   KK  +C   P H T   +          
Sbjct: 452  MVERDWVSWNAMIVGCAQNGYGTEALGLF---KKMLLCGEKPDHVTMIGVLCACSHAGLV 508

Query: 1256 QLGKQAHTHVVK-HGFRFVSGPKSDIFVGNSLVDMYTKCGSIEDGYRVFETM-VERDRVS 1429
            + G++  + + K HG      P  D +    +VD+  + G +++   + E M ++ D V 
Sbjct: 509  EEGRKYFSSMSKEHGL----APLKDHY--TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562

Query: 1430 WNAMI 1444
            W +++
Sbjct: 563  WGSLL 567


>ref|XP_007204096.1| hypothetical protein PRUPE_ppa002338mg [Prunus persica]
            gi|462399627|gb|EMJ05295.1| hypothetical protein
            PRUPE_ppa002338mg [Prunus persica]
          Length = 685

 Score =  669 bits (1725), Expect = 0.0
 Identities = 319/440 (72%), Positives = 378/440 (85%)
 Frame = +2

Query: 125  LLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQNRLIDVYAKCGCLNDAHNLFDRMPQKN 304
            LL  C+++KS RD HR+HAR+IKTQF+SEIFIQNRLID Y KCGCL+DA  LFD+MPQ+N
Sbjct: 5    LLDSCIRTKSARDAHRIHARVIKTQFSSEIFIQNRLIDAYGKCGCLDDARKLFDKMPQRN 64

Query: 305  TFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEALGTFVEMHW 484
            TFTWNSIIS  TK GF+D+A+++F+LMPEPD+CSWNSMVSGFAQHDR EEAL  FV++H 
Sbjct: 65   TFTWNSIISTLTKLGFIDDAVQIFRLMPEPDQCSWNSMVSGFAQHDRFEEALEYFVKLHV 124

Query: 485  EDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSPHSSDVYMGSALIDMYSKCGSVLD 664
            EDFVLNEYS+ SALSACAGL  LKMG QIH  I+KS +SSDVYMGSALIDMYSKCGSV  
Sbjct: 125  EDFVLNEYSFGSALSACAGLRKLKMGVQIHAFIAKSCYSSDVYMGSALIDMYSKCGSVAS 184

Query: 665  ARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIEPDEVTLASVVSACAT 844
            A++VFD M ++N VSWNSLITCYEQNGPA+EA+  FVRMM+ G +PDE+TLASVVSACA+
Sbjct: 185  AQRVFDWMSDRNTVSWNSLITCYEQNGPASEALEVFVRMMDGGFKPDELTLASVVSACAS 244

Query: 845  LSAIEEGSQIHAHVIRSDKFRDDLVLSNALVDMYAKCSKIKEARLVFDRMPMRNVVSETS 1024
            LSAI+EG QI+AHVI+ DK+RDDLVL NALVDMYAKC+++K+AR +FD MP+RNVVSETS
Sbjct: 245  LSAIKEGQQIYAHVIKCDKYRDDLVLGNALVDMYAKCNRLKQARWIFDGMPVRNVVSETS 304

Query: 1025 MVSGYAKSMSVKVARLMFTKMTEKNVISWNALIAGYSQNGENEAALDLFCLLKKESVCPT 1204
            MVSGYAK+ SVK ARLMF KM E+N++SWNALI+GY+QNGENE A+ LF LLK+ESV PT
Sbjct: 305  MVSGYAKAASVKAARLMFAKMMERNIVSWNALISGYTQNGENEEAVGLFLLLKRESVLPT 364

Query: 1205 HYTFGNIXXXXXXXXXXQLGKQAHTHVVKHGFRFVSGPKSDIFVGNSLVDMYTKCGSIED 1384
            HYTFGN+          QLG+QAH H++KHGF+F  G + DIFVGNSL+DMY KCGSIED
Sbjct: 365  HYTFGNLLNACASLVDLQLGRQAHVHLLKHGFKFQVGEEPDIFVGNSLIDMYMKCGSIED 424

Query: 1385 GYRVFETMVERDRVSWNAMI 1444
            G RVF++M+ERD VSWNAMI
Sbjct: 425  GCRVFKSMLERDYVSWNAMI 444



 Score =  194 bits (493), Expect = 8e-47
 Identities = 103/315 (32%), Positives = 178/315 (56%), Gaps = 14/315 (4%)
 Frame = +2

Query: 101  PDSTLFANLLQLCLKSKSPRDVHRVHARLIKT-QFASEIFIQNRLIDVYAKCGCLNDAHN 277
            PD    A+++  C    + ++  +++A +IK  ++  ++ + N L+D+YAKC  L  A  
Sbjct: 230  PDELTLASVVSACASLSAIKEGQQIYAHVIKCDKYRDDLVLGNALVDMYAKCNRLKQARW 289

Query: 278  LFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEA 457
            +FD MP +N  +  S++S + K+  +  A  +F  M E +  SWN+++SG+ Q+   EEA
Sbjct: 290  IFDGMPVRNVVSETSMVSGYAKAASVKAARLMFAKMMERNIVSWNALISGYTQNGENEEA 349

Query: 458  LGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSP------HSSDVYMG 619
            +G F+ +  E  +   Y++ + L+ACA L+DL++G Q H  + K           D+++G
Sbjct: 350  VGLFLLLKRESVLPTHYTFGNLLNACASLVDLQLGRQAHVHLLKHGFKFQVGEEPDIFVG 409

Query: 620  SALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIE 799
            ++LIDMY KCGS+ D  +VF SM+E++ VSWN++I  Y QNG   EA+  F +M+  G +
Sbjct: 410  NSLIDMYMKCGSIEDGCRVFKSMLERDYVSWNAMIVGYAQNGYGTEALEIFRKMLASGEQ 469

Query: 800  PDEVTLASVVSACATLSAIEEG-------SQIHAHVIRSDKFRDDLVLSNALVDMYAKCS 958
            PD VT+  V+ AC+    ++EG       S+ H  V   D +         +VD+  +  
Sbjct: 470  PDHVTMIGVLCACSHAGLVDEGKEYFYSMSEEHGLVPLKDHY-------TCMVDLLGRAG 522

Query: 959  KIKEARLVFDRMPMR 1003
             + EA+ + + MPM+
Sbjct: 523  CLDEAKHLIEVMPMQ 537



 Score =  181 bits (460), Expect = 6e-43
 Identities = 135/505 (26%), Positives = 226/505 (44%), Gaps = 43/505 (8%)
 Frame = +2

Query: 59   RFGSVWRQVSDLHLPDSTL----FANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQN 226
            RF         LH+ D  L    F + L  C   +  +   ++HA + K+ ++S++++ +
Sbjct: 111  RFEEALEYFVKLHVEDFVLNEYSFGSALSACAGLRKLKMGVQIHAFIAKSCYSSDVYMGS 170

Query: 227  RLIDVYAKCGCLNDAHNLFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCS 406
             LID+Y+KCG +  A  +FD M  +NT +WNS+I+ + ++G   EA+ +F  M       
Sbjct: 171  ALIDMYSKCGSVASAQRVFDWMSDRNTVSWNSLITCYEQNGPASEALEVFVRM------- 223

Query: 407  WNSMVSGFAQHDRLEEALGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSIS 586
               M  GF                       +E + AS +SACA L  +K G QI+  + 
Sbjct: 224  ---MDGGFKP---------------------DELTLASVVSACASLSAIKEGQQIYAHVI 259

Query: 587  K-SPHSSDVYMGSALIDMYSKCGSVLDARKVFD--------------------------- 682
            K   +  D+ +G+AL+DMY+KC  +  AR +FD                           
Sbjct: 260  KCDKYRDDLVLGNALVDMYAKCNRLKQARWIFDGMPVRNVVSETSMVSGYAKAASVKAAR 319

Query: 683  ----SMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIEPDEVTLASVVSACATLS 850
                 M+E+NIVSWN+LI+ Y QNG   EA+  F+ +    + P   T  ++++ACA+L 
Sbjct: 320  LMFAKMMERNIVSWNALISGYTQNGENEEAVGLFLLLKRESVLPTHYTFGNLLNACASLV 379

Query: 851  AIEEGSQIHAHVIRSD-KFR----DDLVLSNALVDMYAKCSKIKEARLVFDRMPMRNVVS 1015
             ++ G Q H H+++   KF+     D+ + N+L+DMY KC  I++   VF  M  R+ VS
Sbjct: 380  DLQLGRQAHVHLLKHGFKFQVGEEPDIFVGNSLIDMYMKCGSIEDGCRVFKSMLERDYVS 439

Query: 1016 ETSMVSGYAKSMSVKVARLMFTKMTEKNVISWNALIAGYSQNGENEAALDLFCLLKKESV 1195
              +M+ GYA                               QNG    AL++F  +     
Sbjct: 440  WNAMIVGYA-------------------------------QNGYGTEALEIFRKMLASGE 468

Query: 1196 CPTHYTFGNIXXXXXXXXXXQLGKQ-AHTHVVKHGFRFVSGPKSDIFVGNSLVDMYTKCG 1372
             P H T   +            GK+  ++   +HG      P  D +    +VD+  + G
Sbjct: 469  QPDHVTMIGVLCACSHAGLVDEGKEYFYSMSEEHGL----VPLKDHY--TCMVDLLGRAG 522

Query: 1373 SIEDGYRVFETM-VERDRVSWNAMI 1444
             +++   + E M ++ D V W +++
Sbjct: 523  CLDEAKHLIEVMPMQPDAVIWGSLL 547


>ref|XP_002517667.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223543299|gb|EEF44831.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 628

 Score =  664 bits (1712), Expect = 0.0
 Identities = 318/464 (68%), Positives = 379/464 (81%)
 Frame = +2

Query: 53   MGRFGSVWRQVSDLHLPDSTLFANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQNRL 232
            M + G V + V DL   DS+ FA LL  CLKSKS RD  R+HAR+IKTQFA E+FIQNRL
Sbjct: 1    MSKHGFVKKIVGDLSFLDSSPFAKLLDSCLKSKSLRDTRRIHARIIKTQFAYEVFIQNRL 60

Query: 233  IDVYAKCGCLNDAHNLFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWN 412
            ID Y KCGC +DA  +FD+MP+KN F+WN+I+S   KSGFLDE  RLF  MPEPD+CSWN
Sbjct: 61   IDAYGKCGCFDDARKIFDQMPEKNVFSWNAIVSTLVKSGFLDEGARLFVSMPEPDQCSWN 120

Query: 413  SMVSGFAQHDRLEEALGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKS 592
            S+++GFAQHDR EEAL  FV+MH + FVLNEY++ S LSACAGL DLK+GTQIHG + KS
Sbjct: 121  SLIAGFAQHDRFEEALNYFVKMHRKGFVLNEYTFGSGLSACAGLKDLKIGTQIHGLMLKS 180

Query: 593  PHSSDVYMGSALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFF 772
                DVYMGSALID+YSKCG V  A++VFD M+E+N+VSWNSLITCYEQNGP+ EA+  F
Sbjct: 181  QFLLDVYMGSALIDIYSKCGFVDCAQRVFDGMMERNVVSWNSLITCYEQNGPSREALEIF 240

Query: 773  VRMMEFGIEPDEVTLASVVSACATLSAIEEGSQIHAHVIRSDKFRDDLVLSNALVDMYAK 952
            +RMME G EPDEVTLASVVSACA+L+A ++G +IHA V++ DK RDDL+LSNALVDMYAK
Sbjct: 241  MRMMESGFEPDEVTLASVVSACASLAAAKQGLEIHACVVKRDKLRDDLILSNALVDMYAK 300

Query: 953  CSKIKEARLVFDRMPMRNVVSETSMVSGYAKSMSVKVARLMFTKMTEKNVISWNALIAGY 1132
            C +I EAR VFDRMP+RNVVSETSMVSGYAK+ SVK ARL+FTKM E+NV+SWNALIAGY
Sbjct: 301  CGRINEARCVFDRMPIRNVVSETSMVSGYAKTASVKAARLLFTKMIERNVVSWNALIAGY 360

Query: 1133 SQNGENEAALDLFCLLKKESVCPTHYTFGNIXXXXXXXXXXQLGKQAHTHVVKHGFRFVS 1312
            +QNGENE AL LF +LK+E++CPTHYTFGN+          QLG+QAH HV+KHGFRF  
Sbjct: 361  TQNGENEEALRLFRMLKREAICPTHYTFGNLLNACANLADLQLGRQAHAHVLKHGFRFQY 420

Query: 1313 GPKSDIFVGNSLVDMYTKCGSIEDGYRVFETMVERDRVSWNAMI 1444
            G +SD+FVGN+L+DMY KCGS+E+G R+FE MVERD VSWNAMI
Sbjct: 421  GEESDVFVGNALIDMYMKCGSVEEGCRIFENMVERDYVSWNAMI 464



 Score =  188 bits (477), Expect = 6e-45
 Identities = 94/262 (35%), Positives = 155/262 (59%), Gaps = 7/262 (2%)
 Frame = +2

Query: 101  PDSTLFANLLQLCLKSKSPRDVHRVHARLIKT-QFASEIFIQNRLIDVYAKCGCLNDAHN 277
            PD    A+++  C    + +    +HA ++K  +   ++ + N L+D+YAKCG +N+A  
Sbjct: 250  PDEVTLASVVSACASLAAAKQGLEIHACVVKRDKLRDDLILSNALVDMYAKCGRINEARC 309

Query: 278  LFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEA 457
            +FDRMP +N  +  S++S + K+  +  A  LF  M E +  SWN++++G+ Q+   EEA
Sbjct: 310  VFDRMPIRNVVSETSMVSGYAKTASVKAARLLFTKMIERNVVSWNALIAGYTQNGENEEA 369

Query: 458  LGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSP------HSSDVYMG 619
            L  F  +  E      Y++ + L+ACA L DL++G Q H  + K          SDV++G
Sbjct: 370  LRLFRMLKREAICPTHYTFGNLLNACANLADLQLGRQAHAHVLKHGFRFQYGEESDVFVG 429

Query: 620  SALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIE 799
            +ALIDMY KCGSV +  ++F++M+E++ VSWN++I  Y QNG   EA+  F +M+  G +
Sbjct: 430  NALIDMYMKCGSVEEGCRIFENMVERDYVSWNAMIVGYAQNGYGMEALGLFRKMLASGEK 489

Query: 800  PDEVTLASVVSACATLSAIEEG 865
            PD VT+   + AC+    ++EG
Sbjct: 490  PDHVTMIGALCACSHAGLVQEG 511



 Score =  184 bits (468), Expect = 7e-44
 Identities = 123/404 (30%), Positives = 185/404 (45%), Gaps = 38/404 (9%)
 Frame = +2

Query: 116  FANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQNRLIDVYAKCGCLNDAHNLFDRMP 295
            F + L  C   K  +   ++H  ++K+QF  ++++ + LID+Y+KCG             
Sbjct: 154  FGSGLSACAGLKDLKIGTQIHGLMLKSQFLLDVYMGSALIDIYSKCG------------- 200

Query: 296  QKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEALGTFVE 475
                              F+D A R+F  M E +  SWNS+++ + Q+    EAL  F+ 
Sbjct: 201  ------------------FVDCAQRVFDGMMERNVVSWNSLITCYEQNGPSREALEIFMR 242

Query: 476  MHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSPH-SSDVYMGSALIDMYSKCG 652
            M    F  +E + AS +SACA L   K G +IH  + K      D+ + +AL+DMY+KCG
Sbjct: 243  MMESGFEPDEVTLASVVSACASLAAAKQGLEIHACVVKRDKLRDDLILSNALVDMYAKCG 302

Query: 653  SVLDARKVFD-------------------------------SMIEKNIVSWNSLITCYEQ 739
             + +AR VFD                                MIE+N+VSWN+LI  Y Q
Sbjct: 303  RINEARCVFDRMPIRNVVSETSMVSGYAKTASVKAARLLFTKMIERNVVSWNALIAGYTQ 362

Query: 740  NGPANEAIRFFVRMMEFGIEPDEVTLASVVSACATLSAIEEGSQIHAHVIRSDKFR---- 907
            NG   EA+R F  +    I P   T  ++++ACA L+ ++ G Q HAHV++   FR    
Sbjct: 363  NGENEEALRLFRMLKREAICPTHYTFGNLLNACANLADLQLGRQAHAHVLKHG-FRFQYG 421

Query: 908  --DDLVLSNALVDMYAKCSKIKEARLVFDRMPMRNVVSETSMVSGYAKSMSVKVARLMFT 1081
               D+ + NAL+DMY KC  ++E   +F+                               
Sbjct: 422  EESDVFVGNALIDMYMKCGSVEEGCRIFEN------------------------------ 451

Query: 1082 KMTEKNVISWNALIAGYSQNGENEAALDLFCLLKKESVCPTHYT 1213
             M E++ +SWNA+I GY+QNG    AL LF  +      P H T
Sbjct: 452  -MVERDYVSWNAMIVGYAQNGYGMEALGLFRKMLASGEKPDHVT 494


>ref|XP_004502949.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like
            [Cicer arietinum]
          Length = 706

 Score =  657 bits (1696), Expect = 0.0
 Identities = 321/464 (69%), Positives = 377/464 (81%)
 Frame = +2

Query: 53   MGRFGSVWRQVSDLHLPDSTLFANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQNRL 232
            MG+ G V + V DL   DS+ FA LL  C++SKS  +  RVHAR+IKTQF+SEIFIQNRL
Sbjct: 1    MGKHGLVRKVVGDLSFLDSSPFAKLLDCCVRSKSVFEARRVHARIIKTQFSSEIFIQNRL 60

Query: 233  IDVYAKCGCLNDAHNLFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWN 412
            +DVY KCGCL DA  +FD MP++N F+WN+++SA TK G LDEA+ +FK MPEPD+CSWN
Sbjct: 61   VDVYGKCGCLEDARKVFDHMPERNIFSWNAVLSALTKCGALDEALNVFKCMPEPDQCSWN 120

Query: 413  SMVSGFAQHDRLEEALGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKS 592
            +MVSGFAQ DR EEAL  F +MH EDFVLNEYS+ SALSACAGL+DL +G QIHG I+KS
Sbjct: 121  AMVSGFAQRDRFEEALRFFFDMHGEDFVLNEYSFGSALSACAGLIDLNIGFQIHGLIAKS 180

Query: 593  PHSSDVYMGSALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFF 772
             +S DVY+GSAL+DMYSKCG V  A++ FD M  +NIVSWNSLITCYEQNGPA +A+  F
Sbjct: 181  RYSFDVYIGSALVDMYSKCGVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVF 240

Query: 773  VRMMEFGIEPDEVTLASVVSACATLSAIEEGSQIHAHVIRSDKFRDDLVLSNALVDMYAK 952
            VRMM FGIEPDE+TLASVVSACA+LSAI EG QIHA V++ DKFR+DLVL NALVDMYAK
Sbjct: 241  VRMMNFGIEPDEITLASVVSACASLSAIREGLQIHARVMKCDKFRNDLVLGNALVDMYAK 300

Query: 953  CSKIKEARLVFDRMPMRNVVSETSMVSGYAKSMSVKVARLMFTKMTEKNVISWNALIAGY 1132
            C ++ EARLVFDRMP+R+VVSETSMVSGYAK  SVK ARLMF+ MTE+NV+SWNALIAGY
Sbjct: 301  CKRVNEARLVFDRMPLRDVVSETSMVSGYAKVASVKAARLMFSNMTERNVVSWNALIAGY 360

Query: 1133 SQNGENEAALDLFCLLKKESVCPTHYTFGNIXXXXXXXXXXQLGKQAHTHVVKHGFRFVS 1312
            +QNGENE A+ LF LLK+ES+ PTHYTFGN+          +LG+QAHT ++KHGF F  
Sbjct: 361  TQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQF 420

Query: 1313 GPKSDIFVGNSLVDMYTKCGSIEDGYRVFETMVERDRVSWNAMI 1444
            G  SDIFVGNSL+DMY KCG +EDG  VFE MVERD VSWNAMI
Sbjct: 421  GEDSDIFVGNSLIDMYMKCGLVEDGRVVFEHMVERDIVSWNAMI 464



 Score =  200 bits (509), Expect = 1e-48
 Identities = 107/307 (34%), Positives = 173/307 (56%), Gaps = 7/307 (2%)
 Frame = +2

Query: 101  PDSTLFANLLQLCLKSKSPRDVHRVHARLIKT-QFASEIFIQNRLIDVYAKCGCLNDAHN 277
            PD    A+++  C    + R+  ++HAR++K  +F +++ + N L+D+YAKC  +N+A  
Sbjct: 250  PDEITLASVVSACASLSAIREGLQIHARVMKCDKFRNDLVLGNALVDMYAKCKRVNEARL 309

Query: 278  LFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEA 457
            +FDRMP ++  +  S++S + K   +  A  +F  M E +  SWN++++G+ Q+   EEA
Sbjct: 310  VFDRMPLRDVVSETSMVSGYAKVASVKAARLMFSNMTERNVVSWNALIAGYTQNGENEEA 369

Query: 458  LGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSP------HSSDVYMG 619
            +  F+ +  E      Y++ + L+ACA L DLK+G Q H  I K          SD+++G
Sbjct: 370  VRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQFGEDSDIFVG 429

Query: 620  SALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIE 799
            ++LIDMY KCG V D R VF+ M+E++IVSWN++I  Y QNG   EA+  F +M   G +
Sbjct: 430  NSLIDMYMKCGLVEDGRVVFEHMVERDIVSWNAMIVGYAQNGYGTEALEIFRKMQVSGEK 489

Query: 800  PDEVTLASVVSACATLSAIEEGSQIHAHVIRSDKFRDDLVLSNALVDMYAKCSKIKEARL 979
            PD VT+  V+SAC+    +EEG +    +               LVD+  +   + EA  
Sbjct: 490  PDHVTMIGVLSACSHAGLVEEGRRYFRSMTTEHGLAPIKDHYTCLVDLLGRAGCLDEANN 549

Query: 980  VFDRMPM 1000
            +   MPM
Sbjct: 550  LIQTMPM 556



 Score =  183 bits (465), Expect = 1e-43
 Identities = 132/505 (26%), Positives = 223/505 (44%), Gaps = 43/505 (8%)
 Frame = +2

Query: 59   RFGSVWRQVSDLHLPDSTL----FANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQN 226
            RF    R   D+H  D  L    F + L  C          ++H  + K++++ +++I +
Sbjct: 131  RFEEALRFFFDMHGEDFVLNEYSFGSALSACAGLIDLNIGFQIHGLIAKSRYSFDVYIGS 190

Query: 227  RLIDVYAKCGCLNDAHNLFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCS 406
             L+D+Y+KCG +  A                                R F  M   +  S
Sbjct: 191  ALVDMYSKCGVVASAQ-------------------------------RAFDDMDVRNIVS 219

Query: 407  WNSMVSGFAQHDRLEEALGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSIS 586
            WNS+++ + Q+    +AL  FV M       +E + AS +SACA L  ++ G QIH  + 
Sbjct: 220  WNSLITCYEQNGPAGKALEVFVRMMNFGIEPDEITLASVVSACASLSAIREGLQIHARVM 279

Query: 587  K-SPHSSDVYMGSALIDMYSKCGSVLDARKVFD--------------------------- 682
            K     +D+ +G+AL+DMY+KC  V +AR VFD                           
Sbjct: 280  KCDKFRNDLVLGNALVDMYAKCKRVNEARLVFDRMPLRDVVSETSMVSGYAKVASVKAAR 339

Query: 683  ----SMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIEPDEVTLASVVSACATLS 850
                +M E+N+VSWN+LI  Y QNG   EA+R F+ +    I P   T  ++++ACA L+
Sbjct: 340  LMFSNMTERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLA 399

Query: 851  AIEEGSQIHAHVIRSDKF-----RDDLVLSNALVDMYAKCSKIKEARLVFDRMPMRNVVS 1015
             ++ G Q H  +++   +       D+ + N+L+DMY KC  +++ R+V           
Sbjct: 400  DLKLGRQAHTQILKHGFWFQFGEDSDIFVGNSLIDMYMKCGLVEDGRVV----------- 448

Query: 1016 ETSMVSGYAKSMSVKVARLMFTKMTEKNVISWNALIAGYSQNGENEAALDLFCLLKKESV 1195
                                F  M E++++SWNA+I GY+QNG    AL++F  ++    
Sbjct: 449  --------------------FEHMVERDIVSWNAMIVGYAQNGYGTEALEIFRKMQVSGE 488

Query: 1196 CPTHYTFGNIXXXXXXXXXXQLGKQ-AHTHVVKHGFRFVSGPKSDIFVGNSLVDMYTKCG 1372
             P H T   +          + G++   +   +HG      P  D +    LVD+  + G
Sbjct: 489  KPDHVTMIGVLSACSHAGLVEEGRRYFRSMTTEHGL----APIKDHY--TCLVDLLGRAG 542

Query: 1373 SIEDGYRVFETM-VERDRVSWNAMI 1444
             +++   + +TM +E D V W +++
Sbjct: 543  CLDEANNLIQTMPMEPDAVVWGSLL 567


>ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like
            [Glycine max]
          Length = 705

 Score =  647 bits (1668), Expect = 0.0
 Identities = 317/464 (68%), Positives = 372/464 (80%)
 Frame = +2

Query: 53   MGRFGSVWRQVSDLHLPDSTLFANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQNRL 232
            MGR G V + V +L   DS+ FA LL  C++SKS  D  R+HAR+IKTQF+SEIFIQNRL
Sbjct: 1    MGRHGFVQKLVGELCFLDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRL 60

Query: 233  IDVYAKCGCLNDAHNLFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWN 412
            +D Y KCG   DA  +FDRMPQ+NTF++N+++S  TK G LDEA  +FK MPEPD+CSWN
Sbjct: 61   VDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWN 120

Query: 413  SMVSGFAQHDRLEEALGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKS 592
            +MVSGFAQHDR EEAL  FV+MH EDFVLNEYS+ SALSACAGL DL MG QIH  ISKS
Sbjct: 121  AMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKS 180

Query: 593  PHSSDVYMGSALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFF 772
             +  DVYMGSAL+DMYSKCG V  A++ FD M  +NIVSWNSLITCYEQNGPA +A+  F
Sbjct: 181  RYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVF 240

Query: 773  VRMMEFGIEPDEVTLASVVSACATLSAIEEGSQIHAHVIRSDKFRDDLVLSNALVDMYAK 952
            V MM+ G+EPDE+TLASVVSACA+ SAI EG QIHA V++ DK+R+DLVL NALVDMYAK
Sbjct: 241  VMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAK 300

Query: 953  CSKIKEARLVFDRMPMRNVVSETSMVSGYAKSMSVKVARLMFTKMTEKNVISWNALIAGY 1132
            C ++ EARLVFDRMP+RNVVSETSMV GYA++ SVK ARLMF+ M EKNV+SWNALIAGY
Sbjct: 301  CRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGY 360

Query: 1133 SQNGENEAALDLFCLLKKESVCPTHYTFGNIXXXXXXXXXXQLGKQAHTHVVKHGFRFVS 1312
            +QNGENE A+ LF LLK+ES+ PTHYTFGN+          +LG+QAHT ++KHGF F S
Sbjct: 361  TQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQS 420

Query: 1313 GPKSDIFVGNSLVDMYTKCGSIEDGYRVFETMVERDRVSWNAMI 1444
            G +SDIFVGNSL+DMY KCG +EDG  VFE MVERD VSWNAMI
Sbjct: 421  GEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMI 464



 Score =  198 bits (503), Expect = 6e-48
 Identities = 108/317 (34%), Positives = 184/317 (58%), Gaps = 13/317 (4%)
 Frame = +2

Query: 101  PDSTLFANLLQLCLKSKSPRDVHRVHARLIKT-QFASEIFIQNRLIDVYAKCGCLNDAHN 277
            PD    A+++  C    + R+  ++HAR++K  ++ +++ + N L+D+YAKC  +N+A  
Sbjct: 250  PDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARL 309

Query: 278  LFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEA 457
            +FDRMP +N  +  S++  + ++  +  A  +F  M E +  SWN++++G+ Q+   EEA
Sbjct: 310  VFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEA 369

Query: 458  LGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISK------SPHSSDVYMG 619
            +  F+ +  E      Y++ + L+ACA L DLK+G Q H  I K      S   SD+++G
Sbjct: 370  VRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVG 429

Query: 620  SALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIE 799
            ++LIDMY KCG V D   VF+ M+E+++VSWN++I  Y QNG    A+  F +M+  G +
Sbjct: 430  NSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQK 489

Query: 800  PDEVTLASVVSACATLSAIEEGSQIHAHVIRSD----KFRDDLVLSNALVDMYAKCSKIK 967
            PD VT+  V+SAC+    +EEG + + H +R++      +D       +VD+  +   + 
Sbjct: 490  PDHVTMIGVLSACSHAGLVEEGRR-YFHSMRTELGLAPMKDHF---TCMVDLLGRAGCLD 545

Query: 968  EARLVFDRMPMR--NVV 1012
            EA  +   MPM+  NVV
Sbjct: 546  EANDLIQTMPMQPDNVV 562



 Score =  189 bits (479), Expect = 3e-45
 Identities = 132/510 (25%), Positives = 228/510 (44%), Gaps = 48/510 (9%)
 Frame = +2

Query: 59   RFGSVWRQVSDLHLPDSTL----FANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQN 226
            RF    R   D+H  D  L    F + L  C          ++HA + K+++  ++++ +
Sbjct: 131  RFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGS 190

Query: 227  RLIDVYAKCGCLNDAHNLFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCS 406
             L+D+Y+KCG +  A   FD M  +N                                 S
Sbjct: 191  ALVDMYSKCGVVACAQRAFDGMAVRNIV-------------------------------S 219

Query: 407  WNSMVSGFAQHDRLEEALGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSIS 586
            WNS+++ + Q+    +AL  FV M       +E + AS +SACA    ++ G QIH  + 
Sbjct: 220  WNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVV 279

Query: 587  K-SPHSSDVYMGSALIDMYSKCGSVLDARKVFD--------------------------- 682
            K   + +D+ +G+AL+DMY+KC  V +AR VFD                           
Sbjct: 280  KRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAAR 339

Query: 683  ----SMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIEPDEVTLASVVSACATLS 850
                +M+EKN+VSWN+LI  Y QNG   EA+R F+ +    I P   T  ++++ACA L+
Sbjct: 340  LMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLA 399

Query: 851  AIEEGSQIHAHVIRSDKF-----RDDLVLSNALVDMYAKCSKIKEARLVFDRMPMRNVVS 1015
             ++ G Q H  +++   +       D+ + N+L+DMY KC  +++  LVF+         
Sbjct: 400  DLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFE--------- 450

Query: 1016 ETSMVSGYAKSMSVKVARLMFTKMTEKNVISWNALIAGYSQNGENEAALDLFCLLKKESV 1195
                                  +M E++V+SWNA+I GY+QNG    AL++F  +     
Sbjct: 451  ----------------------RMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQ 488

Query: 1196 CPTHYTFGNIXXXXXXXXXXQLGKQAHTHVVKHGFRFVSGPKSDIFVG------NSLVDM 1357
             P H T   +           L   +H  +V+ G R+    ++++ +         +VD+
Sbjct: 489  KPDHVTMIGV-----------LSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDL 537

Query: 1358 YTKCGSIEDGYRVFETM-VERDRVSWNAMI 1444
              + G +++   + +TM ++ D V W +++
Sbjct: 538  LGRAGCLDEANDLIQTMPMQPDNVVWGSLL 567


>ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355491679|gb|AES72882.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 705

 Score =  644 bits (1661), Expect = 0.0
 Identities = 317/464 (68%), Positives = 371/464 (79%)
 Frame = +2

Query: 53   MGRFGSVWRQVSDLHLPDSTLFANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQNRL 232
            M + G V + V DL   DS+ FA LL  C+KSKS  +   VHAR+IKTQF+SEIFIQNRL
Sbjct: 1    MAKHGLVRKVVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRL 60

Query: 233  IDVYAKCGCLNDAHNLFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWN 412
            +DVY KCG L DA  +FD M Q+NTF+WN+++ A TK G LDEA+ LFK MPE D+CSWN
Sbjct: 61   VDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWN 120

Query: 413  SMVSGFAQHDRLEEALGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKS 592
            +MVSGFAQ DR EEAL   V+MH EDFVLNEYS+ SALSACAGLMDL +G QIHG I+KS
Sbjct: 121  AMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKS 180

Query: 593  PHSSDVYMGSALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFF 772
             +S DVYMGSAL+DMYSKC  V  A++ FD M  +NIVSWNSLITCYEQNGPA +A+  F
Sbjct: 181  RYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVF 240

Query: 773  VRMMEFGIEPDEVTLASVVSACATLSAIEEGSQIHAHVIRSDKFRDDLVLSNALVDMYAK 952
            VRMM  GIEPDE+TLASV SACA+LSAI EG QIHA V++ DK+R+DLVL NALVDMYAK
Sbjct: 241  VRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAK 300

Query: 953  CSKIKEARLVFDRMPMRNVVSETSMVSGYAKSMSVKVARLMFTKMTEKNVISWNALIAGY 1132
            C ++ EARLVFDRMP+R+VVSETSMVSGYAK+ SVK ARLMF+ M E+NV+SWNALIAGY
Sbjct: 301  CRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGY 360

Query: 1133 SQNGENEAALDLFCLLKKESVCPTHYTFGNIXXXXXXXXXXQLGKQAHTHVVKHGFRFVS 1312
            +QNGENE A+ LF LLK+ES+ PTHYTFGN+          +LG+QAHTH++KHGF F S
Sbjct: 361  TQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKS 420

Query: 1313 GPKSDIFVGNSLVDMYTKCGSIEDGYRVFETMVERDRVSWNAMI 1444
            G  SDIFVGNSL+DMY KCG +EDG  VFE M+ERD VSWNAMI
Sbjct: 421  GEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMI 464



 Score =  194 bits (492), Expect = 1e-46
 Identities = 108/314 (34%), Positives = 175/314 (55%), Gaps = 14/314 (4%)
 Frame = +2

Query: 101  PDSTLFANLLQLCLKSKSPRDVHRVHARLIK-TQFASEIFIQNRLIDVYAKCGCLNDAHN 277
            PD    A++   C    + R+  ++HAR++K  ++ +++ + N L+D+YAKC  +N+A  
Sbjct: 250  PDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARL 309

Query: 278  LFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEA 457
            +FDRMP ++  +  S++S + K+  +  A  +F  M E +  SWN++++G+ Q+   EEA
Sbjct: 310  VFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEA 369

Query: 458  LGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISK------SPHSSDVYMG 619
            +  F+ +  E      Y++ + L+ACA L DLK+G Q H  I K      S   SD+++G
Sbjct: 370  VRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVG 429

Query: 620  SALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIE 799
            ++LIDMY KCG V D R VF+ M+E++ VSWN++I  Y QNG   EA+  F  M+  G  
Sbjct: 430  NSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGER 489

Query: 800  PDEVTLASVVSACATLSAIEEG-------SQIHAHVIRSDKFRDDLVLSNALVDMYAKCS 958
            PD VT+  V+SAC+    +EEG       +  H  V   D +         +VD+  +  
Sbjct: 490  PDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHY-------TCMVDLLGRAG 542

Query: 959  KIKEARLVFDRMPM 1000
             + EA  +   MPM
Sbjct: 543  CLDEANNLIQTMPM 556



 Score =  187 bits (474), Expect = 1e-44
 Identities = 132/505 (26%), Positives = 225/505 (44%), Gaps = 43/505 (8%)
 Frame = +2

Query: 59   RFGSVWRQVSDLHLPDSTL----FANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQN 226
            RF    R V D+H  D  L    F + L  C          ++H  + K++++ ++++ +
Sbjct: 131  RFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGS 190

Query: 227  RLIDVYAKCGCLNDAHNLFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCS 406
             L+D+Y+KC  +  A   FD M  +N                                 S
Sbjct: 191  ALVDMYSKCRVVASAQRAFDDMDVRNIV-------------------------------S 219

Query: 407  WNSMVSGFAQHDRLEEALGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSIS 586
            WNS+++ + Q+    +AL  FV M       +E + AS  SACA L  ++ G QIH  + 
Sbjct: 220  WNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVM 279

Query: 587  K-SPHSSDVYMGSALIDMYSKCGSVLDARKVFD--------------------------- 682
            K   + +D+ +G+AL+DMY+KC  V +AR VFD                           
Sbjct: 280  KHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAAR 339

Query: 683  ----SMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIEPDEVTLASVVSACATLS 850
                +M+E+N+VSWN+LI  Y QNG   EA+R F+ +    I P   T  ++++ACA L+
Sbjct: 340  LMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLA 399

Query: 851  AIEEGSQIHAHVIRSDKF-----RDDLVLSNALVDMYAKCSKIKEARLVFDRMPMRNVVS 1015
             ++ G Q H H+++   +       D+ + N+L+DMY KC  +++ RL            
Sbjct: 400  DLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRL------------ 447

Query: 1016 ETSMVSGYAKSMSVKVARLMFTKMTEKNVISWNALIAGYSQNGENEAALDLFCLLKKESV 1195
                               +F +M E++ +SWNA+I GY+QNG    AL++F  +     
Sbjct: 448  -------------------VFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGE 488

Query: 1196 CPTHYTFGNIXXXXXXXXXXQLGK-QAHTHVVKHGFRFVSGPKSDIFVGNSLVDMYTKCG 1372
             P H T   +          + G+    +  ++HG      P  D +    +VD+  + G
Sbjct: 489  RPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGL----VPVKDHY--TCMVDLLGRAG 542

Query: 1373 SIEDGYRVFETM-VERDRVSWNAMI 1444
             +++   + +TM +E D V W +++
Sbjct: 543  CLDEANNLIQTMPMEPDAVVWGSLL 567


>ref|XP_007137795.1| hypothetical protein PHAVU_009G156000g [Phaseolus vulgaris]
            gi|561010882|gb|ESW09789.1| hypothetical protein
            PHAVU_009G156000g [Phaseolus vulgaris]
          Length = 705

 Score =  642 bits (1655), Expect = 0.0
 Identities = 311/464 (67%), Positives = 374/464 (80%)
 Frame = +2

Query: 53   MGRFGSVWRQVSDLHLPDSTLFANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQNRL 232
            MGR G V + V DL   DS+ FA LL  C++SKS  D  R+H R+IK QF+SEIFIQNRL
Sbjct: 1    MGRHGVVQKVVGDLCFLDSSPFAKLLDSCIRSKSGIDARRIHCRIIKAQFSSEIFIQNRL 60

Query: 233  IDVYAKCGCLNDAHNLFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWN 412
            +D Y KCGC  +A  +F  MP +NTF++N+I+S FTK G LDEA+ +FK MPEPD+CSWN
Sbjct: 61   VDAYGKCGCFEEARKVFVHMPLRNTFSYNAILSVFTKFGKLDEALSVFKSMPEPDQCSWN 120

Query: 413  SMVSGFAQHDRLEEALGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKS 592
            +MVSGFAQHDR EEAL  F++MH EDFV+NEYS+ SALSACAGL DL +G QIH  ISK 
Sbjct: 121  AMVSGFAQHDRFEEALKFFLDMHSEDFVVNEYSFGSALSACAGLTDLNVGVQIHALISKC 180

Query: 593  PHSSDVYMGSALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFF 772
             +  DVYMGSAL+DMYSKCG V  A++ FD M+ +NIVSWNSLITCYEQNGPA +A+  F
Sbjct: 181  RYLLDVYMGSALVDMYSKCGVVTCAQRAFDEMVVRNIVSWNSLITCYEQNGPAQKALEIF 240

Query: 773  VRMMEFGIEPDEVTLASVVSACATLSAIEEGSQIHAHVIRSDKFRDDLVLSNALVDMYAK 952
            VRMM+  +EPDE+T+ASVVSACA+LSA  EG QIHA VI+ DKFR+DLVL NALVDMYAK
Sbjct: 241  VRMMDNRVEPDEITMASVVSACASLSATREGLQIHARVIKRDKFRNDLVLGNALVDMYAK 300

Query: 953  CSKIKEARLVFDRMPMRNVVSETSMVSGYAKSMSVKVARLMFTKMTEKNVISWNALIAGY 1132
            C +++EARLVFDRMP+R+VVSETSMVSGYA++ SVK ARLMF+KM E+NV+SWNALIAGY
Sbjct: 301  CKRVREARLVFDRMPVRDVVSETSMVSGYARAASVKAARLMFSKMMERNVVSWNALIAGY 360

Query: 1133 SQNGENEAALDLFCLLKKESVCPTHYTFGNIXXXXXXXXXXQLGKQAHTHVVKHGFRFVS 1312
            +QNGENE A+ LF LLK++S+ PTHYTFGN+          +LG+QAHTH++KHGF F S
Sbjct: 361  TQNGENEEAVRLFLLLKRDSLWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFQS 420

Query: 1313 GPKSDIFVGNSLVDMYTKCGSIEDGYRVFETMVERDRVSWNAMI 1444
            G +SDIFVGNSL+DMY KCG +EDG  +FE MVERD VSWNAMI
Sbjct: 421  GEESDIFVGNSLIDMYMKCGMVEDGCLIFEHMVERDIVSWNAMI 464



 Score =  198 bits (504), Expect = 4e-48
 Identities = 109/343 (31%), Positives = 197/343 (57%), Gaps = 12/343 (3%)
 Frame = +2

Query: 101  PDSTLFANLLQLCLKSKSPRDVHRVHARLIKT-QFASEIFIQNRLIDVYAKCGCLNDAHN 277
            PD    A+++  C    + R+  ++HAR+IK  +F +++ + N L+D+YAKC  + +A  
Sbjct: 250  PDEITMASVVSACASLSATREGLQIHARVIKRDKFRNDLVLGNALVDMYAKCKRVREARL 309

Query: 278  LFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEA 457
            +FDRMP ++  +  S++S + ++  +  A  +F  M E +  SWN++++G+ Q+   EEA
Sbjct: 310  VFDRMPVRDVVSETSMVSGYARAASVKAARLMFSKMMERNVVSWNALIAGYTQNGENEEA 369

Query: 458  LGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISK------SPHSSDVYMG 619
            +  F+ +  +      Y++ + L+ACA L DLK+G Q H  I K      S   SD+++G
Sbjct: 370  VRLFLLLKRDSLWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFQSGEESDIFVG 429

Query: 620  SALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIE 799
            ++LIDMY KCG V D   +F+ M+E++IVSWN++I  Y QNG   +A+  F +M+  G +
Sbjct: 430  NSLIDMYMKCGMVEDGCLIFEHMVERDIVSWNAMIVGYAQNGYGTDALEIFRKMLLSGEK 489

Query: 800  PDEVTLASVVSACATLSAIEEGSQIHAHVIRSD----KFRDDLVLSNALVDMYAKCSKIK 967
            PD VT+  V+SAC+    +EEG + + H +R++      +D       ++D+  +   + 
Sbjct: 490  PDHVTMIGVLSACSHAGLVEEGRR-YFHSMRAEYGLAPLKDHF---TCMIDLLGRAGCLD 545

Query: 968  EARLVFDRMPMR-NVVSETSMVSGYAKSMSVKVARLMFTKMTE 1093
            EA  +   MPM+ + V   S+++      ++K+ + +  K+ E
Sbjct: 546  EANDLMQTMPMQPDAVVLGSLLAACKVHGNIKLGKYVAEKLME 588



 Score =  181 bits (460), Expect = 6e-43
 Identities = 125/492 (25%), Positives = 216/492 (43%), Gaps = 42/492 (8%)
 Frame = +2

Query: 59   RFGSVWRQVSDLHLPDSTL----FANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQN 226
            RF    +   D+H  D  +    F + L  C          ++HA + K ++  ++++ +
Sbjct: 131  RFEEALKFFLDMHSEDFVVNEYSFGSALSACAGLTDLNVGVQIHALISKCRYLLDVYMGS 190

Query: 227  RLIDVYAKCGCLNDAHNLFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCS 406
             L+D+Y+KCG +  A   FD M  +N                                 S
Sbjct: 191  ALVDMYSKCGVVTCAQRAFDEMVVRNIV-------------------------------S 219

Query: 407  WNSMVSGFAQHDRLEEALGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSIS 586
            WNS+++ + Q+   ++AL  FV M       +E + AS +SACA L   + G QIH  + 
Sbjct: 220  WNSLITCYEQNGPAQKALEIFVRMMDNRVEPDEITMASVVSACASLSATREGLQIHARVI 279

Query: 587  K-SPHSSDVYMGSALIDMYSKCGSVLDARKVFD--------------------------- 682
            K     +D+ +G+AL+DMY+KC  V +AR VFD                           
Sbjct: 280  KRDKFRNDLVLGNALVDMYAKCKRVREARLVFDRMPVRDVVSETSMVSGYARAASVKAAR 339

Query: 683  ----SMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIEPDEVTLASVVSACATLS 850
                 M+E+N+VSWN+LI  Y QNG   EA+R F+ +    + P   T  ++++ACA L+
Sbjct: 340  LMFSKMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRDSLWPTHYTFGNLLNACANLA 399

Query: 851  AIEEGSQIHAHVIRSDKF-----RDDLVLSNALVDMYAKCSKIKEARLVFDRMPMRNVVS 1015
             ++ G Q H H+++   +       D+ + N+L+DMY KC  +++  L+F+         
Sbjct: 400  DLKLGRQAHTHILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLIFEH-------- 451

Query: 1016 ETSMVSGYAKSMSVKVARLMFTKMTEKNVISWNALIAGYSQNGENEAALDLFCLLKKESV 1195
                                   M E++++SWNA+I GY+QNG    AL++F  +     
Sbjct: 452  -----------------------MVERDIVSWNAMIVGYAQNGYGTDALEIFRKMLLSGE 488

Query: 1196 CPTHYTFGNIXXXXXXXXXXQLGKQ-AHTHVVKHGFRFVSGPKSDIFVGNSLVDMYTKCG 1372
             P H T   +          + G++  H+   ++G      P  D F    ++D+  + G
Sbjct: 489  KPDHVTMIGVLSACSHAGLVEEGRRYFHSMRAEYGL----APLKDHF--TCMIDLLGRAG 542

Query: 1373 SIEDGYRVFETM 1408
             +++   + +TM
Sbjct: 543  CLDEANDLMQTM 554


>ref|XP_007044258.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao]
            gi|508708193|gb|EOY00090.1| Pentatricopeptide repeat
            (PPR) superfamily protein [Theobroma cacao]
          Length = 700

 Score =  641 bits (1654), Expect = 0.0
 Identities = 318/464 (68%), Positives = 372/464 (80%)
 Frame = +2

Query: 53   MGRFGSVWRQVSDLHLPDSTLFANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQNRL 232
            M + G + + V DL LPDS+ FA LL   ++SKS  DVHR+HAR+ K+ FASE FI NRL
Sbjct: 1    MAKRGLLKQIVGDLSLPDSSPFAKLLDSYIQSKSLLDVHRLHARITKSNFASETFILNRL 60

Query: 233  IDVYAKCGCLNDAHNLFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWN 412
            ID Y KCG L DA  +FDRMPQ+N F+WNS I+A TK GF+DEA R+F  M E D+CSWN
Sbjct: 61   IDAYGKCGSLEDARKVFDRMPQRNIFSWNSAITALTKFGFVDEAARIFGSMSEHDQCSWN 120

Query: 413  SMVSGFAQHDRLEEALGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKS 592
            S++SGFAQ D+ EEAL  FV MH EDF LNEYS+ SALSAC+GL D+KMGTQIH  ++K+
Sbjct: 121  SIISGFAQQDKFEEALYYFVRMHREDFALNEYSFGSALSACSGLKDMKMGTQIHALMTKT 180

Query: 593  PHSSDVYMGSALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFF 772
               SDVYMGSAL+DMY KCGSV  A++ FD M ++N VSWNSLITCYEQNGPA  A+  F
Sbjct: 181  LFLSDVYMGSALVDMYGKCGSVCCAQRAFDDMNQRNRVSWNSLITCYEQNGPAGVALEVF 240

Query: 773  VRMMEFGIEPDEVTLASVVSACATLSAIEEGSQIHAHVIRSDKFRDDLVLSNALVDMYAK 952
            +RMM+ GIEPDEVTLASVVSACA+LSAI+EG QIHA V++  K RDDLVL NALVDMYAK
Sbjct: 241  LRMMDCGIEPDEVTLASVVSACASLSAIKEGKQIHARVVKCIKLRDDLVLCNALVDMYAK 300

Query: 953  CSKIKEARLVFDRMPMRNVVSETSMVSGYAKSMSVKVARLMFTKMTEKNVISWNALIAGY 1132
            CS+I EAR VFDRMP+RNVVSETSMVSGYAK+ SVK ARLMF KM E+N++SWNALIAGY
Sbjct: 301  CSRINEARCVFDRMPVRNVVSETSMVSGYAKAASVKTARLMFMKMMERNIVSWNALIAGY 360

Query: 1133 SQNGENEAALDLFCLLKKESVCPTHYTFGNIXXXXXXXXXXQLGKQAHTHVVKHGFRFVS 1312
            +QNGE+E AL LF LLK+ESVCPTHYTFGN+          QLG+QAHTHV+KHGFRF  
Sbjct: 361  TQNGEDEEALRLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVLKHGFRFQF 420

Query: 1313 GPKSDIFVGNSLVDMYTKCGSIEDGYRVFETMVERDRVSWNAMI 1444
            G  SDIFVGNSL+DMY KCGS+EDG +VF+ M+ERD VSWNAMI
Sbjct: 421  GEDSDIFVGNSLIDMYMKCGSVEDGDQVFKNMMERDWVSWNAMI 464



 Score =  197 bits (501), Expect = 1e-47
 Identities = 106/315 (33%), Positives = 177/315 (56%), Gaps = 14/315 (4%)
 Frame = +2

Query: 101  PDSTLFANLLQLCLKSKSPRDVHRVHARLIKT-QFASEIFIQNRLIDVYAKCGCLNDAHN 277
            PD    A+++  C    + ++  ++HAR++K  +   ++ + N L+D+YAKC  +N+A  
Sbjct: 250  PDEVTLASVVSACASLSAIKEGKQIHARVVKCIKLRDDLVLCNALVDMYAKCSRINEARC 309

Query: 278  LFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEA 457
            +FDRMP +N  +  S++S + K+  +  A  +F  M E +  SWN++++G+ Q+   EEA
Sbjct: 310  VFDRMPVRNVVSETSMVSGYAKAASVKTARLMFMKMMERNIVSWNALIAGYTQNGEDEEA 369

Query: 458  LGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSP------HSSDVYMG 619
            L  F  +  E      Y++ + L+ACA L DL++G Q H  + K          SD+++G
Sbjct: 370  LRLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVLKHGFRFQFGEDSDIFVG 429

Query: 620  SALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIE 799
            ++LIDMY KCGSV D  +VF +M+E++ VSWN++I  Y QNG  N+A+  F  M+  G +
Sbjct: 430  NSLIDMYMKCGSVEDGDQVFKNMMERDWVSWNAMIVGYAQNGYGNKALELFKNMLVSGEK 489

Query: 800  PDEVTLASVVSACATLSAIEEG-------SQIHAHVIRSDKFRDDLVLSNALVDMYAKCS 958
            PD VT+  V+ AC+    +EEG       S  H  V   D +         +VD+  +  
Sbjct: 490  PDHVTMIGVLCACSHAGLVEEGRHHFSSMSSEHGLVPLKDHY-------TCMVDLLGRAG 542

Query: 959  KIKEARLVFDRMPMR 1003
             + EA+ + + MPM+
Sbjct: 543  CLNEAKNLIETMPMK 557



 Score =  172 bits (436), Expect = 3e-40
 Identities = 132/483 (27%), Positives = 209/483 (43%), Gaps = 40/483 (8%)
 Frame = +2

Query: 116  FANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQNRLIDVYAKCGCLNDAHNLFDRMP 295
            F + L  C   K  +   ++HA + KT F S++++ + L+D+Y KCG +  A   FD M 
Sbjct: 154  FGSALSACSGLKDMKMGTQIHALMTKTLFLSDVYMGSALVDMYGKCGSVCCAQRAFDDMN 213

Query: 296  QKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEALGTFVE 475
            Q+N                               R SWNS+++ + Q+     AL  F+ 
Sbjct: 214  QRN-------------------------------RVSWNSLITCYEQNGPAGVALEVFLR 242

Query: 476  MHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSPH-SSDVYMGSALIDMYSKCG 652
            M       +E + AS +SACA L  +K G QIH  + K      D+ + +AL+DMY+KC 
Sbjct: 243  MMDCGIEPDEVTLASVVSACASLSAIKEGKQIHARVVKCIKLRDDLVLCNALVDMYAKCS 302

Query: 653  SVLDARKVFD-------------------------------SMIEKNIVSWNSLITCYEQ 739
             + +AR VFD                                M+E+NIVSWN+LI  Y Q
Sbjct: 303  RINEARCVFDRMPVRNVVSETSMVSGYAKAASVKTARLMFMKMMERNIVSWNALIAGYTQ 362

Query: 740  NGPANEAIRFFVRMMEFGIEPDEVTLASVVSACATLSAIEEGSQIHAHVIRSDKFR---- 907
            NG   EA+R F  +    + P   T  ++++ACA L+ ++ G Q H HV++   FR    
Sbjct: 363  NGEDEEALRLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVLKHG-FRFQFG 421

Query: 908  --DDLVLSNALVDMYAKCSKIKEARLVFDRMPMRNVVSETSMVSGYAKSMSVKVARLMFT 1081
               D+ + N+L+DMY KC  +++   VF  M  R+ VS  +M                  
Sbjct: 422  EDSDIFVGNSLIDMYMKCGSVEDGDQVFKNMMERDWVSWNAM------------------ 463

Query: 1082 KMTEKNVISWNALIAGYSQNGENEAALDLFCLLKKESVCPTHYTFGNIXXXXXXXXXXQL 1261
                         I GY+QNG    AL+LF  +      P H T   +          + 
Sbjct: 464  -------------IVGYAQNGYGNKALELFKNMLVSGEKPDHVTMIGVLCACSHAGLVEE 510

Query: 1262 GKQAHTHV-VKHGFRFVSGPKSDIFVGNSLVDMYTKCGSIEDGYRVFETM-VERDRVSWN 1435
            G+   + +  +HG      P  D +    +VD+  + G + +   + ETM ++ D V W 
Sbjct: 511  GRHHFSSMSSEHGL----VPLKDHY--TCMVDLLGRAGCLNEAKNLIETMPMKPDAVVWG 564

Query: 1436 AMI 1444
            +++
Sbjct: 565  SLL 567


>emb|CBI38165.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  635 bits (1639), Expect = e-179
 Identities = 317/454 (69%), Positives = 366/454 (80%)
 Frame = +2

Query: 83   VSDLHLPDSTLFANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQNRLIDVYAKCGCL 262
            V DL+LP+S+ FA LL  CL+S+S R    VHAR++ TQF+ EIFIQNRLIDVY KC CL
Sbjct: 7    VRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCL 66

Query: 263  NDAHNLFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHD 442
            +DA  LFDRMPQ+NTFTWNS+IS  TKSGFLDEA RLF  MPEPD+CSWNSMVSGFAQHD
Sbjct: 67   DDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHD 126

Query: 443  RLEEALGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSPHSSDVYMGS 622
            R EE+L  FV+MH EDF+LNEYS+ SALSACAGLMDL MGTQ+H  +SKS +S+DVYMGS
Sbjct: 127  RFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGS 186

Query: 623  ALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIEP 802
            ALIDMYSKCGSV  A +VF  MIE+N+V+WNSLITCYEQNGPA+EA+  FVRMM+ G+EP
Sbjct: 187  ALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEP 246

Query: 803  DEVTLASVVSACATLSAIEEGSQIHAHVIRSDKFRDDLVLSNALVDMYAKCSKIKEARLV 982
            DEVTLASVVSACA+L A++EG QIHA V++++KFRDDLVL NALVDMYAKCSK+ EAR V
Sbjct: 247  DEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRV 306

Query: 983  FDRMPMRNVVSETSMVSGYAKSMSVKVARLMFTKMTEKNVISWNALIAGYSQNGENEAAL 1162
            FDRM +RNVVSETSMVSGYA++ SVK AR MF+KMT++NV+SWNALIAGY+QNGENE AL
Sbjct: 307  FDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEAL 366

Query: 1163 DLFCLLKKESVCPTHYTFGNIXXXXXXXXXXQLGKQAHTHVVKHGFRFVSGPKSDIFVGN 1342
             LF LLK+ES+ PTHYTFGN+                               KSDIFVGN
Sbjct: 367  RLFRLLKRESIWPTHYTFGNLL------------------------------KSDIFVGN 396

Query: 1343 SLVDMYTKCGSIEDGYRVFETMVERDRVSWNAMI 1444
            SL+DMY KCGSIEDG RVFE M ERD VSWNA+I
Sbjct: 397  SLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAII 430



 Score =  166 bits (419), Expect = 3e-38
 Identities = 97/347 (27%), Positives = 181/347 (52%), Gaps = 8/347 (2%)
 Frame = +2

Query: 101  PDSTLFANLLQLCLKSKSPRDVHRVHARLIKT-QFASEIFIQNRLIDVYAKCGCLNDAHN 277
            PD    A+++  C    + ++  ++HAR++KT +F  ++ + N L+D+YAKC  +N+A  
Sbjct: 246  PDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARR 305

Query: 278  LFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEA 457
            +FDRM  +N  +  S++S + ++  +  A  +F  M + +  SWN++++G+ Q+   EEA
Sbjct: 306  VFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEA 365

Query: 458  LGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSPHSSDVYMGSALIDM 637
            L  F  +  E      Y++ + L                         SD+++G++LIDM
Sbjct: 366  LRLFRLLKRESIWPTHYTFGNLLK------------------------SDIFVGNSLIDM 401

Query: 638  YSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIEPDEVTL 817
            Y KCGS+ D  +VF+ M E++ VSWN++I  Y QNG   EA++ F +M+  G +PD VT+
Sbjct: 402  YMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTM 461

Query: 818  ASVVSACATLSAIEEG------SQIHAHVIRSDKFRDDLVLSNALVDMYAKCSKIKEARL 979
              V+ AC+    +EEG       + H  +   D +         +VD+  +   + EA+ 
Sbjct: 462  IGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHY-------TCMVDLLGRAGCLNEAKN 514

Query: 980  VFDRMPMR-NVVSETSMVSGYAKSMSVKVARLMFTKMTEKNVISWNA 1117
            + + MP+  + V   S+++      ++++ +    K+ E  +  WN+
Sbjct: 515  LIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLE--IDPWNS 559


>ref|XP_002310520.1| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|222853423|gb|EEE90970.1|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 710

 Score =  622 bits (1604), Expect = e-175
 Identities = 302/447 (67%), Positives = 357/447 (79%)
 Frame = +2

Query: 104  DSTLFANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQNRLIDVYAKCGCLNDAHNLF 283
            DS+ FA LL LC+K +S RD   VH RLI+T F  E+FIQNRLIDVY KCG L+ A  +F
Sbjct: 23   DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82

Query: 284  DRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEALG 463
            DRM ++N F++NSIIS   + GF+DE+  LF LMPE D+CSWNSM++GFAQHDR EEAL 
Sbjct: 83   DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142

Query: 464  TFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSPHSSDVYMGSALIDMYS 643
             FV MH +DFVLN+YS+ S LSAC+ L DLK+G QIHG ISKS +S DV+MGS LID YS
Sbjct: 143  WFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYS 202

Query: 644  KCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIEPDEVTLAS 823
            KCG V  AR+VFD M EKN+VSWN LITCYEQNGPA EA+  F RM E G +PDEVTLAS
Sbjct: 203  KCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLAS 262

Query: 824  VVSACATLSAIEEGSQIHAHVIRSDKFRDDLVLSNALVDMYAKCSKIKEARLVFDRMPMR 1003
            VVSACATL+A +EG QIHA V++SDKFR+DL+L NALVDMYAKC ++ EAR VFDRMP+R
Sbjct: 263  VVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVR 322

Query: 1004 NVVSETSMVSGYAKSMSVKVARLMFTKMTEKNVISWNALIAGYSQNGENEAALDLFCLLK 1183
            N VSET+MVSGYAKS SVK AR MF  + +K+++SWNALIAGY+QNGENE AL LF +LK
Sbjct: 323  NAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLK 382

Query: 1184 KESVCPTHYTFGNIXXXXXXXXXXQLGKQAHTHVVKHGFRFVSGPKSDIFVGNSLVDMYT 1363
            +ESVCPTHYTFGN+          +LG+QAH+HVVKHGFRF SG + DIFVGNSL+DMY 
Sbjct: 383  RESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYM 442

Query: 1364 KCGSIEDGYRVFETMVERDRVSWNAMI 1444
            KCGS+E+G RVFE MVE+D VSWN MI
Sbjct: 443  KCGSVEEGLRVFENMVEKDHVSWNTMI 469



 Score =  206 bits (523), Expect = 3e-50
 Identities = 115/376 (30%), Positives = 211/376 (56%), Gaps = 11/376 (2%)
 Frame = +2

Query: 101  PDSTLFANLLQLCLKSKSPRDVHRVHARLIKT-QFASEIFIQNRLIDVYAKCGCLNDAHN 277
            PD    A+++  C    + ++  ++HAR++K+ +F +++ + N L+D+YAKCG +N+A  
Sbjct: 255  PDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARC 314

Query: 278  LFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEA 457
            +FDRMP +N  +  +++S + KS  +  A  +F  + + D  SWN++++G+ Q+   EEA
Sbjct: 315  VFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEA 374

Query: 458  LGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISK------SPHSSDVYMG 619
            LG F  +  E      Y++ + L+A A L DL++G Q H  + K      S    D+++G
Sbjct: 375  LGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVG 434

Query: 620  SALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIE 799
            ++LIDMY KCGSV +  +VF++M+EK+ VSWN++I  Y QNG   EA+  F +M+E G +
Sbjct: 435  NSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEK 494

Query: 800  PDEVTLASVVSACATLSAIEEGSQIHAHVIRSDKFRDDLVLSNALVDMYAKCSKIKEARL 979
            PD VT+   + AC+    +EEG +    + +             +VD+  +   ++EA+ 
Sbjct: 495  PDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKD 554

Query: 980  VFDRMPMR-NVVSETSMVSGYAKSMSVKVARLMFTKMTEKNVIS---WNALIAGYSQNGE 1147
            + + MP + + V  +S++S      ++ + + +  K+ E +  S   +  L   YS+ G 
Sbjct: 555  LIESMPKQPDAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGR 614

Query: 1148 NEAALDLFCLLKKESV 1195
               A+ +  L+++  V
Sbjct: 615  WGDAVSVRKLMRRRGV 630



 Score =  176 bits (447), Expect = 2e-41
 Identities = 133/482 (27%), Positives = 216/482 (44%), Gaps = 39/482 (8%)
 Frame = +2

Query: 116  FANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQNRLIDVYAKCGCLNDAHNLFDRMP 295
            F + L  C + K  +   ++H  + K++++ ++F+ + LID Y+KCG +  A        
Sbjct: 159  FGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCAR------- 211

Query: 296  QKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEALGTFVE 475
                                    R+F  M E +  SWN +++ + Q+    EAL  F  
Sbjct: 212  ------------------------RVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGR 247

Query: 476  MHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSPH-SSDVYMGSALIDMYSKCG 652
            M    F  +E + AS +SACA L   K G QIH  + KS    +D+ +G+AL+DMY+KCG
Sbjct: 248  MTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCG 307

Query: 653  SVLDARKVFDSMI-------------------------------EKNIVSWNSLITCYEQ 739
             V +AR VFD M                                +K+IVSWN+LI  Y Q
Sbjct: 308  RVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQ 367

Query: 740  NGPANEAIRFFVRMMEFGIEPDEVTLASVVSACATLSAIEEGSQIHAHVIRSD-KFRD-- 910
            NG   EA+  F  +    + P   T  ++++A A L+ +E G Q H+HV++   +F+   
Sbjct: 368  NGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGE 427

Query: 911  --DLVLSNALVDMYAKCSKIKEARLVFDRMPMRNVVSETSMVSGYAKSMSVKVARLMFTK 1084
              D+ + N+L+DMY KC  ++E   VF+                                
Sbjct: 428  EPDIFVGNSLIDMYMKCGSVEEGLRVFEN------------------------------- 456

Query: 1085 MTEKNVISWNALIAGYSQNGENEAALDLFCLLKKESVCPTHYTFGNIXXXXXXXXXXQLG 1264
            M EK+ +SWN +I GY+QNG    AL+LF  + +    P H T              + G
Sbjct: 457  MVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEG 516

Query: 1265 KQAHTHVVK-HGFRFVSGPKSDIFVGNSLVDMYTKCGSIEDGYRVFETMVER-DRVSWNA 1438
            ++    + K HG      P  D +    +VD+  + G +E+   + E+M ++ D V W++
Sbjct: 517  RRYFFSMTKEHGLL----PVKDHY--TCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSS 570

Query: 1439 MI 1444
            ++
Sbjct: 571  LL 572



 Score =  148 bits (374), Expect = 5e-33
 Identities = 102/349 (29%), Positives = 156/349 (44%), Gaps = 31/349 (8%)
 Frame = +2

Query: 491  FVLNEYSYASALSACAGLMDLKMGTQIHGSISKSPHSSDVYMGSALIDMYSKCGSVLDAR 670
            F  +   +A  L  C  L   +    +HG + ++P   +V++ + LID+Y KCG +  AR
Sbjct: 20   FFTDSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYAR 79

Query: 671  KVFDSMIEKNI-------------------------------VSWNSLITCYEQNGPANE 757
            KVFD M E+N+                                SWNS+I  + Q+    E
Sbjct: 80   KVFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEE 139

Query: 758  AIRFFVRMMEFGIEPDEVTLASVVSACATLSAIEEGSQIHAHVIRSDKFRDDLVLSNALV 937
            A+ +FVRM       ++ +  S +SAC+ L  ++ G+QIH  +I   K+  D+ + + L+
Sbjct: 140  ALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHG-LISKSKYSLDVFMGSGLI 198

Query: 938  DMYAKCSKIKEARLVFDRMPMRNVVSETSMVSGYAKSMSVKVARLMFTKMTEKNVISWNA 1117
            D Y+KC  +  AR VFD M  +NVV                               SWN 
Sbjct: 199  DFYSKCGLVGCARRVFDGMEEKNVV-------------------------------SWNC 227

Query: 1118 LIAGYSQNGENEAALDLFCLLKKESVCPTHYTFGNIXXXXXXXXXXQLGKQAHTHVVKHG 1297
            LI  Y QNG    AL+ F  + +    P   T  ++          + G Q H  VVK  
Sbjct: 228  LITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSD 287

Query: 1298 FRFVSGPKSDIFVGNSLVDMYTKCGSIEDGYRVFETMVERDRVSWNAMI 1444
             +F    ++D+ +GN+LVDMY KCG + +   VF+ M  R+ VS   M+
Sbjct: 288  -KF----RNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMV 331


>ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297329643|gb|EFH60062.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 697

 Score =  619 bits (1597), Expect = e-175
 Identities = 299/447 (66%), Positives = 358/447 (80%), Gaps = 1/447 (0%)
 Frame = +2

Query: 107  STLFANLLQLCLKSK-SPRDVHRVHARLIKTQFASEIFIQNRLIDVYAKCGCLNDAHNLF 283
            S+ FA LL  C+K K S  DV  VHA +IK+ F++E+FIQNRLID YAKCG L D   LF
Sbjct: 19   SSPFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLF 78

Query: 284  DRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEALG 463
            D+MPQ+N FTWNS+++  TK GFLDEA  LF+ MPE D+C+WNSMVSGFAQHDR EEAL 
Sbjct: 79   DKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALY 138

Query: 464  TFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSPHSSDVYMGSALIDMYS 643
             F  MH E FVLNEY++AS LSAC+GL D+  G QIH  I+KSP  SDVY+GSAL+DMYS
Sbjct: 139  YFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYS 198

Query: 644  KCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIEPDEVTLAS 823
            KCG+V DA++VFD M ++N+VSWNSLITCYEQNGPA EA++ F  M+E  +EPDEVTLAS
Sbjct: 199  KCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLAS 258

Query: 824  VVSACATLSAIEEGSQIHAHVIRSDKFRDDLVLSNALVDMYAKCSKIKEARLVFDRMPMR 1003
            V+SACA+LSAI+ G ++HA V++ DK R+D++LSNA VDMYAKCS+IKEAR +FD MP+R
Sbjct: 259  VISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318

Query: 1004 NVVSETSMVSGYAKSMSVKVARLMFTKMTEKNVISWNALIAGYSQNGENEAALDLFCLLK 1183
            NV++ETSMVSGYA + S K ARLMFTKM E+NV+SWNALIAGY+QNGENE AL LFCLLK
Sbjct: 319  NVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLK 378

Query: 1184 KESVCPTHYTFGNIXXXXXXXXXXQLGKQAHTHVVKHGFRFVSGPKSDIFVGNSLVDMYT 1363
            +ESVCPTHYTF NI           LG QAH HV+KHGF+F SG + DIFVGNSL+DMY 
Sbjct: 379  RESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYV 438

Query: 1364 KCGSIEDGYRVFETMVERDRVSWNAMI 1444
            KCG +E+GY VF  M+ERD VSWNAMI
Sbjct: 439  KCGCVEEGYLVFRKMMERDCVSWNAMI 465



 Score =  192 bits (489), Expect = 2e-46
 Identities = 112/376 (29%), Positives = 198/376 (52%), Gaps = 11/376 (2%)
 Frame = +2

Query: 101  PDSTLFANLLQLCLKSKSPRDVHRVHARLIKT-QFASEIFIQNRLIDVYAKCGCLNDAHN 277
            PD    A+++  C    + +    VHAR++K  +  ++I + N  +D+YAKC  + +A  
Sbjct: 251  PDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARF 310

Query: 278  LFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEA 457
            +FD MP +N     S++S +  +     A  +F  M E +  SWN++++G+ Q+   EEA
Sbjct: 311  IFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEA 370

Query: 458  LGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISK------SPHSSDVYMG 619
            L  F  +  E      Y++A+ L ACA L DL +G Q H  + K      S    D+++G
Sbjct: 371  LSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVG 430

Query: 620  SALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIE 799
            ++LIDMY KCG V +   VF  M+E++ VSWN++I  + QNG  NEA+  F  M++ G +
Sbjct: 431  NSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEK 490

Query: 800  PDEVTLASVVSACATLSAIEEGSQIHAHVIRSDKFRDDLVLSNALVDMYAKCSKIKEARL 979
            PD +T+  V+SAC     +EEG    + + R             +VD+  +   ++EA+ 
Sbjct: 491  PDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKS 550

Query: 980  VFDRMPMR-NVVSETSMVSGYAKSMSVKVARLMFTKMTE---KNVISWNALIAGYSQNGE 1147
            + + MP++ + V   S+++      ++ + + +  K+ E    N   +  L   Y++ G+
Sbjct: 551  IIEEMPVQPDSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMYAELGK 610

Query: 1148 NEAALDLFCLLKKESV 1195
               A+++  L++KE V
Sbjct: 611  WGDAMNVRKLMRKEGV 626



 Score =  181 bits (458), Expect = 9e-43
 Identities = 131/487 (26%), Positives = 215/487 (44%), Gaps = 44/487 (9%)
 Frame = +2

Query: 116  FANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQNRLIDVYAKCGCLNDAHNLFDRMP 295
            FA+ L  C          ++H+ + K+   S+++I + L+D+Y+KC              
Sbjct: 155  FASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKC-------------- 200

Query: 296  QKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEALGTFVE 475
                             G +++A ++F  M + +  SWNS+++ + Q+    EAL  F  
Sbjct: 201  -----------------GNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQV 243

Query: 476  MHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSPH-SSDVYMGSALIDMYSKCG 652
            M       +E + AS +SACA L  +K+G ++H  + K     +D+ + +A +DMY+KC 
Sbjct: 244  MLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCS 303

Query: 653  SVLDARKVFDSM-------------------------------IEKNIVSWNSLITCYEQ 739
             + +AR +FDSM                                E+N+VSWN+LI  Y Q
Sbjct: 304  RIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQ 363

Query: 740  NGPANEAIRFFVRMMEFGIEPDEVTLASVVSACATLSAIEEGSQIHAHVIRSD-KFR--- 907
            NG   EA+  F  +    + P   T A+++ ACA L+ +  G Q H HV++   KF+   
Sbjct: 364  NGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGE 423

Query: 908  -DDLVLSNALVDMYAKCSKIKEARLVFDRMPMRNVVSETSMVSGYAKSMSVKVARLMFTK 1084
             DD+ + N+L+DMY KC  ++E                     GY          L+F K
Sbjct: 424  EDDIFVGNSLIDMYVKCGCVEE---------------------GY----------LVFRK 452

Query: 1085 MTEKNVISWNALIAGYSQNGENEAALDLFCLLKKESVCPTHYTFGNIXXXXXXXXXXQLG 1264
            M E++ +SWNA+I G++QNG    AL+LF  +      P H T   +           L 
Sbjct: 453  MMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGV-----------LS 501

Query: 1265 KQAHTHVVKHGFRFVSGPKSDIFVG------NSLVDMYTKCGSIEDGYRVFETM-VERDR 1423
               H   V+ G  + S    D  V         +VD+  + G +E+   + E M V+ D 
Sbjct: 502  ACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDS 561

Query: 1424 VSWNAMI 1444
            V W +++
Sbjct: 562  VIWGSLL 568


>ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g13600 gi|4558664|gb|AAD22682.1| hypothetical protein
            [Arabidopsis thaliana] gi|330251150|gb|AEC06244.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 697

 Score =  614 bits (1584), Expect = e-173
 Identities = 294/448 (65%), Positives = 358/448 (79%), Gaps = 1/448 (0%)
 Frame = +2

Query: 104  DSTLFANLLQLCLKSK-SPRDVHRVHARLIKTQFASEIFIQNRLIDVYAKCGCLNDAHNL 280
            DS+ FA LL  C+KSK S   V  VHA +IK+ F++EIFIQNRLID Y+KCG L D   +
Sbjct: 18   DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77

Query: 281  FDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEAL 460
            FD+MPQ+N +TWNS+++  TK GFLDEA  LF+ MPE D+C+WNSMVSGFAQHDR EEAL
Sbjct: 78   FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137

Query: 461  GTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSPHSSDVYMGSALIDMY 640
              F  MH E FVLNEYS+AS LSAC+GL D+  G Q+H  I+KSP  SDVY+GSAL+DMY
Sbjct: 138  CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197

Query: 641  SKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIEPDEVTLA 820
            SKCG+V DA++VFD M ++N+VSWNSLITC+EQNGPA EA+  F  M+E  +EPDEVTLA
Sbjct: 198  SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257

Query: 821  SVVSACATLSAIEEGSQIHAHVIRSDKFRDDLVLSNALVDMYAKCSKIKEARLVFDRMPM 1000
            SV+SACA+LSAI+ G ++H  V+++DK R+D++LSNA VDMYAKCS+IKEAR +FD MP+
Sbjct: 258  SVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317

Query: 1001 RNVVSETSMVSGYAKSMSVKVARLMFTKMTEKNVISWNALIAGYSQNGENEAALDLFCLL 1180
            RNV++ETSM+SGYA + S K ARLMFTKM E+NV+SWNALIAGY+QNGENE AL LFCLL
Sbjct: 318  RNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL 377

Query: 1181 KKESVCPTHYTFGNIXXXXXXXXXXQLGKQAHTHVVKHGFRFVSGPKSDIFVGNSLVDMY 1360
            K+ESVCPTHY+F NI           LG QAH HV+KHGF+F SG + DIFVGNSL+DMY
Sbjct: 378  KRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMY 437

Query: 1361 TKCGSIEDGYRVFETMVERDRVSWNAMI 1444
             KCG +E+GY VF  M+ERD VSWNAMI
Sbjct: 438  VKCGCVEEGYLVFRKMMERDCVSWNAMI 465



 Score =  192 bits (489), Expect = 2e-46
 Identities = 113/376 (30%), Positives = 196/376 (52%), Gaps = 11/376 (2%)
 Frame = +2

Query: 101  PDSTLFANLLQLCLKSKSPRDVHRVHARLIKT-QFASEIFIQNRLIDVYAKCGCLNDAHN 277
            PD    A+++  C    + +    VH R++K  +  ++I + N  +D+YAKC  + +A  
Sbjct: 251  PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARF 310

Query: 278  LFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEA 457
            +FD MP +N     S+IS +  +     A  +F  M E +  SWN++++G+ Q+   EEA
Sbjct: 311  IFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEA 370

Query: 458  LGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISK------SPHSSDVYMG 619
            L  F  +  E      YS+A+ L ACA L +L +G Q H  + K      S    D+++G
Sbjct: 371  LSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVG 430

Query: 620  SALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIE 799
            ++LIDMY KCG V +   VF  M+E++ VSWN++I  + QNG  NEA+  F  M+E G +
Sbjct: 431  NSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEK 490

Query: 800  PDEVTLASVVSACATLSAIEEGSQIHAHVIRSDKFRDDLVLSNALVDMYAKCSKIKEARL 979
            PD +T+  V+SAC     +EEG    + + R             +VD+  +   ++EA+ 
Sbjct: 491  PDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKS 550

Query: 980  VFDRMPMR-NVVSETSMVSGYAKSMSVKVARLMFTKMTE---KNVISWNALIAGYSQNGE 1147
            + + MPM+ + V   S+++      ++ + + +  K+ E    N   +  L   Y++ G+
Sbjct: 551  MIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGK 610

Query: 1148 NEAALDLFCLLKKESV 1195
             E  +++   ++KE V
Sbjct: 611  WEDVMNVRKSMRKEGV 626



 Score =  191 bits (485), Expect = 7e-46
 Identities = 134/487 (27%), Positives = 220/487 (45%), Gaps = 44/487 (9%)
 Frame = +2

Query: 116  FANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQNRLIDVYAKCGCLNDAHNLFDRMP 295
            FA++L  C          +VH+ + K+ F S+++I + L+D+Y+KC              
Sbjct: 155  FASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKC-------------- 200

Query: 296  QKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEALGTFVE 475
                             G +++A R+F  M + +  SWNS+++ F Q+    EAL  F  
Sbjct: 201  -----------------GNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQM 243

Query: 476  MHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSPH-SSDVYMGSALIDMYSKCG 652
            M       +E + AS +SACA L  +K+G ++HG + K+    +D+ + +A +DMY+KC 
Sbjct: 244  MLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCS 303

Query: 653  SVLDARKVFDSM-------------------------------IEKNIVSWNSLITCYEQ 739
             + +AR +FDSM                                E+N+VSWN+LI  Y Q
Sbjct: 304  RIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQ 363

Query: 740  NGPANEAIRFFVRMMEFGIEPDEVTLASVVSACATLSAIEEGSQIHAHVIRSD-KFR--- 907
            NG   EA+  F  +    + P   + A+++ ACA L+ +  G Q H HV++   KF+   
Sbjct: 364  NGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGE 423

Query: 908  -DDLVLSNALVDMYAKCSKIKEARLVFDRMPMRNVVSETSMVSGYAKSMSVKVARLMFTK 1084
             DD+ + N+L+DMY KC  ++E                     GY          L+F K
Sbjct: 424  EDDIFVGNSLIDMYVKCGCVEE---------------------GY----------LVFRK 452

Query: 1085 MTEKNVISWNALIAGYSQNGENEAALDLFCLLKKESVCPTHYTFGNIXXXXXXXXXXQLG 1264
            M E++ +SWNA+I G++QNG    AL+LF  + +    P H T   +           L 
Sbjct: 453  MMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGV-----------LS 501

Query: 1265 KQAHTHVVKHGFRFVSGPKSDIFVG------NSLVDMYTKCGSIEDGYRVFETM-VERDR 1423
               H   V+ G  + S    D  V         +VD+  + G +E+   + E M ++ D 
Sbjct: 502  ACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDS 561

Query: 1424 VSWNAMI 1444
            V W +++
Sbjct: 562  VIWGSLL 568


>ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like
            [Cucumis sativus] gi|449523485|ref|XP_004168754.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At2g13600-like [Cucumis sativus]
          Length = 687

 Score =  612 bits (1579), Expect = e-172
 Identities = 298/460 (64%), Positives = 367/460 (79%)
 Frame = +2

Query: 65   GSVWRQVSDLHLPDSTLFANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQNRLIDVY 244
            G V     DL   DS+ F+ LL  C +S+S RD  RVHA +IK+ FASE FIQNRLIDVY
Sbjct: 5    GLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVY 64

Query: 245  AKCGCLNDAHNLFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVS 424
             KCGC++ A  LFDRM ++N F+WNSII AFTKSGFLD+A+ +F+ MP+ D+CSWNSM+S
Sbjct: 65   GKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMIS 124

Query: 425  GFAQHDRLEEALGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSPHSS 604
            GF QH R +EAL  F +MH   F++NEYS+ SALSACAGL DLK+G+QIH  + +S + S
Sbjct: 125  GFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLS 184

Query: 605  DVYMGSALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMM 784
            DVYMGSAL+DMYSKCG V  A+ VFD M  ++ VSWNSLITCYEQNGP +EA++ FV M+
Sbjct: 185  DVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMI 244

Query: 785  EFGIEPDEVTLASVVSACATLSAIEEGSQIHAHVIRSDKFRDDLVLSNALVDMYAKCSKI 964
            + G+EPDEVTLASVVSACAT+SAI+EG QIHA V++ D+FR+DL+L NAL+DMYAKC++I
Sbjct: 245  KCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRI 304

Query: 965  KEARLVFDRMPMRNVVSETSMVSGYAKSMSVKVARLMFTKMTEKNVISWNALIAGYSQNG 1144
             EAR++FD MP+R+VVSETSMVSGYAK+  VKVAR MF+ M  K+VI+WNALIAG +QNG
Sbjct: 305  NEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNG 364

Query: 1145 ENEAALDLFCLLKKESVCPTHYTFGNIXXXXXXXXXXQLGKQAHTHVVKHGFRFVSGPKS 1324
            ENE AL LF LLK+ESV PTHYTFGN+          QLG+QAH+HV+KHGFRF  G  S
Sbjct: 365  ENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDS 424

Query: 1325 DIFVGNSLVDMYTKCGSIEDGYRVFETMVERDRVSWNAMI 1444
            D+FVGNSL+DMY KCGS+E+G RVF+ M+E+D VSWNAMI
Sbjct: 425  DVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMI 464



 Score =  190 bits (482), Expect = 2e-45
 Identities = 103/339 (30%), Positives = 186/339 (54%), Gaps = 8/339 (2%)
 Frame = +2

Query: 101  PDSTLFANLLQLCLKSKSPRDVHRVHARLIKT-QFASEIFIQNRLIDVYAKCGCLNDAHN 277
            PD    A+++  C    + ++  ++HAR++K  +F +++ + N L+D+YAKC  +N+A  
Sbjct: 250  PDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARI 309

Query: 278  LFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEA 457
            +FD MP ++  +  S++S + K+  +  A  +F  M   D  +WN++++G  Q+   EEA
Sbjct: 310  IFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEA 369

Query: 458  LGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSP------HSSDVYMG 619
            L  F  +  E      Y++ + L+ACA L DL++G Q H  + K          SDV++G
Sbjct: 370  LILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVG 429

Query: 620  SALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIE 799
            ++LIDMY KCGSV +  +VF  M+EK+ VSWN++I  Y QNG  N+A+  F +M+E G  
Sbjct: 430  NSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEA 489

Query: 800  PDEVTLASVVSACATLSAIEEGSQIHAHVIRSDKFRDDLVLSNALVDMYAKCSKIKEARL 979
            PD VT+  V+ AC+    ++EG      +               +VD+  +   ++EA+ 
Sbjct: 490  PDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKN 549

Query: 980  VFDRMPMR-NVVSETSMVSGYAKSMSVKVARLMFTKMTE 1093
            + + M M+ + +   S+++      ++++   +  K+ E
Sbjct: 550  LIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLE 588



 Score =  180 bits (457), Expect = 1e-42
 Identities = 127/507 (25%), Positives = 226/507 (44%), Gaps = 44/507 (8%)
 Frame = +2

Query: 56   GRFGSVWRQVSDLH----LPDSTLFANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQ 223
            GRF       + +H    L +   F + L  C   +  +   ++H+ + ++ + S++++ 
Sbjct: 130  GRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMG 189

Query: 224  NRLIDVYAKCGCLNDAHNLFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRC 403
            + L+D+Y+KCG +  A ++FD M  ++                               R 
Sbjct: 190  SALVDMYSKCGRVEYAQSVFDEMTVRS-------------------------------RV 218

Query: 404  SWNSMVSGFAQHDRLEEALGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSI 583
            SWNS+++ + Q+  ++EAL  FVEM       +E + AS +SACA +  +K G QIH  +
Sbjct: 219  SWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARV 278

Query: 584  SKSPH-SSDVYMGSALIDMYSKCGSVLDARKVFD-------------------------- 682
             K     +D+ +G+AL+DMY+KC  + +AR +FD                          
Sbjct: 279  VKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVA 338

Query: 683  -----SMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIEPDEVTLASVVSACATL 847
                 +M+ K++++WN+LI    QNG   EA+  F  +    + P   T  ++++ACA L
Sbjct: 339  RYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANL 398

Query: 848  SAIEEGSQIHAHVIRSDKFR------DDLVLSNALVDMYAKCSKIKEARLVFDRMPMRNV 1009
            + ++ G Q H+HV++   FR       D+ + N+L+DMY KC  ++    VF        
Sbjct: 399  ADLQLGRQAHSHVLKHG-FRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQH------ 451

Query: 1010 VSETSMVSGYAKSMSVKVARLMFTKMTEKNVISWNALIAGYSQNGENEAALDLFCLLKKE 1189
                                     M EK+ +SWNA+I GY+QNG    AL++FC + + 
Sbjct: 452  -------------------------MLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLES 486

Query: 1190 SVCPTHYTFGNIXXXXXXXXXXQLGK-QAHTHVVKHGFRFVSGPKSDIFVGNSLVDMYTK 1366
               P H T   +            G+    +   +HG      P  D +    +VD+  +
Sbjct: 487  GEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLM----PLKDHY--TCMVDLLGR 540

Query: 1367 CGSIEDGYRVFETM-VERDRVSWNAMI 1444
             G +E+   + E M ++ D + W +++
Sbjct: 541  AGYLEEAKNLIEEMSMQPDAIVWGSLL 567


>ref|XP_006297108.1| hypothetical protein CARUB_v10013108mg [Capsella rubella]
            gi|482565817|gb|EOA30006.1| hypothetical protein
            CARUB_v10013108mg [Capsella rubella]
          Length = 691

 Score =  612 bits (1577), Expect = e-172
 Identities = 293/450 (65%), Positives = 358/450 (79%), Gaps = 1/450 (0%)
 Frame = +2

Query: 98   LPDSTLFANLLQLCLKSK-SPRDVHRVHARLIKTQFASEIFIQNRLIDVYAKCGCLNDAH 274
            L DS+ FA LL  C+++K S  DV  VHA ++K+ F +E FIQNRLID Y KCG L+D  
Sbjct: 16   LTDSSPFAKLLDSCIRTKLSATDVRCVHACILKSGFKNETFIQNRLIDAYGKCGSLDDGR 75

Query: 275  NLFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEE 454
             +FD MP++N +TWNS+++A TK GFLDEA  LF L+PE D+C+WNSMVSGFAQHDR EE
Sbjct: 76   QVFDEMPERNVYTWNSVLTALTKLGFLDEADSLFWLVPERDQCTWNSMVSGFAQHDRCEE 135

Query: 455  ALGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSPHSSDVYMGSALID 634
            AL  F  MH E FVLNEYS+AS LSAC+GL D+  G QIH  I+KSP  SDVY+GSAL+D
Sbjct: 136  ALCYFGMMHKEGFVLNEYSFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVD 195

Query: 635  MYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIEPDEVT 814
            MYSKCG V DA++VFD M ++N+VSWNSLITCYEQNGPA EA++ F  M+E  +EPDEVT
Sbjct: 196  MYSKCGDVDDAQRVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVT 255

Query: 815  LASVVSACATLSAIEEGSQIHAHVIRSDKFRDDLVLSNALVDMYAKCSKIKEARLVFDRM 994
            LASV+SACA+LSAI+ G ++H  V+++DK R+D++L+NA VDMYAKCSKI EAR +FD M
Sbjct: 256  LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILTNAFVDMYAKCSKISEARFIFDSM 315

Query: 995  PMRNVVSETSMVSGYAKSMSVKVARLMFTKMTEKNVISWNALIAGYSQNGENEAALDLFC 1174
            P+RNV++ETSM+SGYA + S K ARLMFTKM E+N++SWNALI+GY+QNGENE AL LFC
Sbjct: 316  PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNIVSWNALISGYTQNGENEEALSLFC 375

Query: 1175 LLKKESVCPTHYTFGNIXXXXXXXXXXQLGKQAHTHVVKHGFRFVSGPKSDIFVGNSLVD 1354
            LLK+ESVCPTHYTF NI           LG QAH HV+KHGF+F SG ++DIFVGNSL+D
Sbjct: 376  LLKRESVCPTHYTFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEADIFVGNSLID 435

Query: 1355 MYTKCGSIEDGYRVFETMVERDRVSWNAMI 1444
            MY KCG +EDGY VF  M+ERD VSWNAMI
Sbjct: 436  MYVKCGCVEDGYLVFRKMMERDCVSWNAMI 465



 Score =  198 bits (503), Expect = 6e-48
 Identities = 116/376 (30%), Positives = 199/376 (52%), Gaps = 11/376 (2%)
 Frame = +2

Query: 101  PDSTLFANLLQLCLKSKSPRDVHRVHARLIKT-QFASEIFIQNRLIDVYAKCGCLNDAHN 277
            PD    A+++  C    + +    VH R++K  +  ++I + N  +D+YAKC  +++A  
Sbjct: 251  PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILTNAFVDMYAKCSKISEARF 310

Query: 278  LFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEA 457
            +FD MP +N     S+IS +  +     A  +F  M E +  SWN+++SG+ Q+   EEA
Sbjct: 311  IFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNIVSWNALISGYTQNGENEEA 370

Query: 458  LGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISK------SPHSSDVYMG 619
            L  F  +  E      Y++A+ L ACA L +L +G Q H  + K      S   +D+++G
Sbjct: 371  LSLFCLLKRESVCPTHYTFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEADIFVG 430

Query: 620  SALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIE 799
            ++LIDMY KCG V D   VF  M+E++ VSWN++I  + QNG  NEA+  F  M++ G +
Sbjct: 431  NSLIDMYVKCGCVEDGYLVFRKMMERDCVSWNAMIVGFAQNGYGNEALELFREMLDSGEK 490

Query: 800  PDEVTLASVVSACATLSAIEEGSQIHAHVIRSDKFRDDLVLSNALVDMYAKCSKIKEARL 979
            PD VT+  V+SAC     +EEG    + + R             +VD+  +   ++EA+ 
Sbjct: 491  PDHVTMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKS 550

Query: 980  VFDRMPMR-NVVSETSMVSGYAKSMSVKVARLMFTKMTE---KNVISWNALIAGYSQNGE 1147
            + + MPM+ + V   S+++      ++ + + +  K+ E    N   +  L   Y++ G+
Sbjct: 551  MVEEMPMQPDSVIWGSLLAACKVHRNITIGKYVAEKLLEVEASNSGPYVLLSNMYAEVGK 610

Query: 1148 NEAALDLFCLLKKESV 1195
             E  +++  L+KKE V
Sbjct: 611  WEDVMNVRKLMKKEGV 626



 Score =  182 bits (463), Expect = 2e-43
 Identities = 132/487 (27%), Positives = 217/487 (44%), Gaps = 44/487 (9%)
 Frame = +2

Query: 116  FANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQNRLIDVYAKCGCLNDAHNLFDRMP 295
            FA+ L  C          ++H+ + K+   S+++I + L+D+Y+KC              
Sbjct: 155  FASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKC-------------- 200

Query: 296  QKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEALGTFVE 475
                             G +D+A R+F  M + +  SWNS+++ + Q+    EAL  F  
Sbjct: 201  -----------------GDVDDAQRVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQV 243

Query: 476  MHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSPH-SSDVYMGSALIDMYSKCG 652
            M       +E + AS +SACA L  +K+G ++HG + K+    +D+ + +A +DMY+KC 
Sbjct: 244  MLESWVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILTNAFVDMYAKCS 303

Query: 653  SVLDARKVFDSM-------------------------------IEKNIVSWNSLITCYEQ 739
             + +AR +FDSM                                E+NIVSWN+LI+ Y Q
Sbjct: 304  KISEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNIVSWNALISGYTQ 363

Query: 740  NGPANEAIRFFVRMMEFGIEPDEVTLASVVSACATLSAIEEGSQIHAHVIRSD-KFRD-- 910
            NG   EA+  F  +    + P   T A+++ ACA L+ +  G Q H HV++   KF+   
Sbjct: 364  NGENEEALSLFCLLKRESVCPTHYTFANILKACADLAELHLGMQAHVHVLKHGFKFQSGE 423

Query: 911  --DLVLSNALVDMYAKCSKIKEARLVFDRMPMRNVVSETSMVSGYAKSMSVKVARLMFTK 1084
              D+ + N+L+DMY KC  +++                     GY          L+F K
Sbjct: 424  EADIFVGNSLIDMYVKCGCVED---------------------GY----------LVFRK 452

Query: 1085 MTEKNVISWNALIAGYSQNGENEAALDLFCLLKKESVCPTHYTFGNIXXXXXXXXXXQLG 1264
            M E++ +SWNA+I G++QNG    AL+LF  +      P H T   +           L 
Sbjct: 453  MMERDCVSWNAMIVGFAQNGYGNEALELFREMLDSGEKPDHVTMIGV-----------LS 501

Query: 1265 KQAHTHVVKHGFRFVSGPKSDIFVG------NSLVDMYTKCGSIEDGYRVFETM-VERDR 1423
               H   V+ G  + S    D  V         +VD+  + G +E+   + E M ++ D 
Sbjct: 502  ACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMVEEMPMQPDS 561

Query: 1424 VSWNAMI 1444
            V W +++
Sbjct: 562  VIWGSLL 568


>ref|XP_006297107.1| hypothetical protein CARUB_v10013108mg [Capsella rubella]
            gi|482565816|gb|EOA30005.1| hypothetical protein
            CARUB_v10013108mg [Capsella rubella]
          Length = 690

 Score =  612 bits (1577), Expect = e-172
 Identities = 293/450 (65%), Positives = 358/450 (79%), Gaps = 1/450 (0%)
 Frame = +2

Query: 98   LPDSTLFANLLQLCLKSK-SPRDVHRVHARLIKTQFASEIFIQNRLIDVYAKCGCLNDAH 274
            L DS+ FA LL  C+++K S  DV  VHA ++K+ F +E FIQNRLID Y KCG L+D  
Sbjct: 16   LTDSSPFAKLLDSCIRTKLSATDVRCVHACILKSGFKNETFIQNRLIDAYGKCGSLDDGR 75

Query: 275  NLFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEE 454
             +FD MP++N +TWNS+++A TK GFLDEA  LF L+PE D+C+WNSMVSGFAQHDR EE
Sbjct: 76   QVFDEMPERNVYTWNSVLTALTKLGFLDEADSLFWLVPERDQCTWNSMVSGFAQHDRCEE 135

Query: 455  ALGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSPHSSDVYMGSALID 634
            AL  F  MH E FVLNEYS+AS LSAC+GL D+  G QIH  I+KSP  SDVY+GSAL+D
Sbjct: 136  ALCYFGMMHKEGFVLNEYSFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVD 195

Query: 635  MYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIEPDEVT 814
            MYSKCG V DA++VFD M ++N+VSWNSLITCYEQNGPA EA++ F  M+E  +EPDEVT
Sbjct: 196  MYSKCGDVDDAQRVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVT 255

Query: 815  LASVVSACATLSAIEEGSQIHAHVIRSDKFRDDLVLSNALVDMYAKCSKIKEARLVFDRM 994
            LASV+SACA+LSAI+ G ++H  V+++DK R+D++L+NA VDMYAKCSKI EAR +FD M
Sbjct: 256  LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILTNAFVDMYAKCSKISEARFIFDSM 315

Query: 995  PMRNVVSETSMVSGYAKSMSVKVARLMFTKMTEKNVISWNALIAGYSQNGENEAALDLFC 1174
            P+RNV++ETSM+SGYA + S K ARLMFTKM E+N++SWNALI+GY+QNGENE AL LFC
Sbjct: 316  PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNIVSWNALISGYTQNGENEEALSLFC 375

Query: 1175 LLKKESVCPTHYTFGNIXXXXXXXXXXQLGKQAHTHVVKHGFRFVSGPKSDIFVGNSLVD 1354
            LLK+ESVCPTHYTF NI           LG QAH HV+KHGF+F SG ++DIFVGNSL+D
Sbjct: 376  LLKRESVCPTHYTFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEADIFVGNSLID 435

Query: 1355 MYTKCGSIEDGYRVFETMVERDRVSWNAMI 1444
            MY KCG +EDGY VF  M+ERD VSWNAMI
Sbjct: 436  MYVKCGCVEDGYLVFRKMMERDCVSWNAMI 465



 Score =  198 bits (503), Expect = 6e-48
 Identities = 116/376 (30%), Positives = 199/376 (52%), Gaps = 11/376 (2%)
 Frame = +2

Query: 101  PDSTLFANLLQLCLKSKSPRDVHRVHARLIKT-QFASEIFIQNRLIDVYAKCGCLNDAHN 277
            PD    A+++  C    + +    VH R++K  +  ++I + N  +D+YAKC  +++A  
Sbjct: 251  PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILTNAFVDMYAKCSKISEARF 310

Query: 278  LFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEA 457
            +FD MP +N     S+IS +  +     A  +F  M E +  SWN+++SG+ Q+   EEA
Sbjct: 311  IFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNIVSWNALISGYTQNGENEEA 370

Query: 458  LGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISK------SPHSSDVYMG 619
            L  F  +  E      Y++A+ L ACA L +L +G Q H  + K      S   +D+++G
Sbjct: 371  LSLFCLLKRESVCPTHYTFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEADIFVG 430

Query: 620  SALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIE 799
            ++LIDMY KCG V D   VF  M+E++ VSWN++I  + QNG  NEA+  F  M++ G +
Sbjct: 431  NSLIDMYVKCGCVEDGYLVFRKMMERDCVSWNAMIVGFAQNGYGNEALELFREMLDSGEK 490

Query: 800  PDEVTLASVVSACATLSAIEEGSQIHAHVIRSDKFRDDLVLSNALVDMYAKCSKIKEARL 979
            PD VT+  V+SAC     +EEG    + + R             +VD+  +   ++EA+ 
Sbjct: 491  PDHVTMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKS 550

Query: 980  VFDRMPMR-NVVSETSMVSGYAKSMSVKVARLMFTKMTE---KNVISWNALIAGYSQNGE 1147
            + + MPM+ + V   S+++      ++ + + +  K+ E    N   +  L   Y++ G+
Sbjct: 551  MVEEMPMQPDSVIWGSLLAACKVHRNITIGKYVAEKLLEVEASNSGPYVLLSNMYAEVGK 610

Query: 1148 NEAALDLFCLLKKESV 1195
             E  +++  L+KKE V
Sbjct: 611  WEDVMNVRKLMKKEGV 626



 Score =  182 bits (463), Expect = 2e-43
 Identities = 132/487 (27%), Positives = 217/487 (44%), Gaps = 44/487 (9%)
 Frame = +2

Query: 116  FANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQNRLIDVYAKCGCLNDAHNLFDRMP 295
            FA+ L  C          ++H+ + K+   S+++I + L+D+Y+KC              
Sbjct: 155  FASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKC-------------- 200

Query: 296  QKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEALGTFVE 475
                             G +D+A R+F  M + +  SWNS+++ + Q+    EAL  F  
Sbjct: 201  -----------------GDVDDAQRVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQV 243

Query: 476  MHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSPH-SSDVYMGSALIDMYSKCG 652
            M       +E + AS +SACA L  +K+G ++HG + K+    +D+ + +A +DMY+KC 
Sbjct: 244  MLESWVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILTNAFVDMYAKCS 303

Query: 653  SVLDARKVFDSM-------------------------------IEKNIVSWNSLITCYEQ 739
             + +AR +FDSM                                E+NIVSWN+LI+ Y Q
Sbjct: 304  KISEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNIVSWNALISGYTQ 363

Query: 740  NGPANEAIRFFVRMMEFGIEPDEVTLASVVSACATLSAIEEGSQIHAHVIRSD-KFRD-- 910
            NG   EA+  F  +    + P   T A+++ ACA L+ +  G Q H HV++   KF+   
Sbjct: 364  NGENEEALSLFCLLKRESVCPTHYTFANILKACADLAELHLGMQAHVHVLKHGFKFQSGE 423

Query: 911  --DLVLSNALVDMYAKCSKIKEARLVFDRMPMRNVVSETSMVSGYAKSMSVKVARLMFTK 1084
              D+ + N+L+DMY KC  +++                     GY          L+F K
Sbjct: 424  EADIFVGNSLIDMYVKCGCVED---------------------GY----------LVFRK 452

Query: 1085 MTEKNVISWNALIAGYSQNGENEAALDLFCLLKKESVCPTHYTFGNIXXXXXXXXXXQLG 1264
            M E++ +SWNA+I G++QNG    AL+LF  +      P H T   +           L 
Sbjct: 453  MMERDCVSWNAMIVGFAQNGYGNEALELFREMLDSGEKPDHVTMIGV-----------LS 501

Query: 1265 KQAHTHVVKHGFRFVSGPKSDIFVG------NSLVDMYTKCGSIEDGYRVFETM-VERDR 1423
               H   V+ G  + S    D  V         +VD+  + G +E+   + E M ++ D 
Sbjct: 502  ACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMVEEMPMQPDS 561

Query: 1424 VSWNAMI 1444
            V W +++
Sbjct: 562  VIWGSLL 568


>ref|XP_006409682.1| hypothetical protein EUTSA_v10022582mg [Eutrema salsugineum]
            gi|557110844|gb|ESQ51135.1| hypothetical protein
            EUTSA_v10022582mg [Eutrema salsugineum]
          Length = 687

 Score =  604 bits (1558), Expect = e-170
 Identities = 287/454 (63%), Positives = 355/454 (78%), Gaps = 2/454 (0%)
 Frame = +2

Query: 89   DLHLPDSTL-FANLLQLCLKSK-SPRDVHRVHARLIKTQFASEIFIQNRLIDVYAKCGCL 262
            DL   DS+  F+ LL  C+KSK SP DV  VHA +IK+ F +E++IQNRLID YAKCG L
Sbjct: 12   DLSFTDSSSPFSKLLDSCIKSKLSPNDVRSVHASIIKSPFFNEVYIQNRLIDAYAKCGSL 71

Query: 263  NDAHNLFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHD 442
             D   +FD+MP +N +TWNS+++A  K G LDEA  LF  MPE D+C+WNSMVSGFAQHD
Sbjct: 72   EDGRKVFDKMPDRNVYTWNSLVTALAKLGLLDEADSLFMSMPERDQCTWNSMVSGFAQHD 131

Query: 443  RLEEALGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSPHSSDVYMGS 622
            R EEAL  F  MH E FVLNEY++AS LSAC+ L D+  G QIH  ++KSP  SDV++GS
Sbjct: 132  RCEEALNYFALMHKEGFVLNEYTFASGLSACSSLNDMNRGIQIHSLVAKSPRLSDVHIGS 191

Query: 623  ALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIEP 802
            AL+DMYSKCG+V DA++VFD M ++N+V+WNSLITCYEQNGPA EA++ F  M+   +EP
Sbjct: 192  ALVDMYSKCGNVNDAQQVFDEMGDRNVVTWNSLITCYEQNGPAAEALKVFHVMLRASVEP 251

Query: 803  DEVTLASVVSACATLSAIEEGSQIHAHVIRSDKFRDDLVLSNALVDMYAKCSKIKEARLV 982
            DE+TLASV+SACA+LS I+ G ++H  V ++DK R+D++LSNA VDMYAKC  IKEAR +
Sbjct: 252  DEITLASVISACASLSDIKAGQEVHGRVAKNDKLRNDIILSNAFVDMYAKCGMIKEARFI 311

Query: 983  FDRMPMRNVVSETSMVSGYAKSMSVKVARLMFTKMTEKNVISWNALIAGYSQNGENEAAL 1162
            FD MP+RNV++ETSM+SGYA + S K ARLMFTKMTE+N++SWNALI+GY+QNGENE AL
Sbjct: 312  FDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMTERNIVSWNALISGYTQNGENEEAL 371

Query: 1163 DLFCLLKKESVCPTHYTFGNIXXXXXXXXXXQLGKQAHTHVVKHGFRFVSGPKSDIFVGN 1342
             LFCLLK+ESVCPTHYTF NI           LG QAH HV+KHGF+F SG ++DIFVGN
Sbjct: 372  SLFCLLKRESVCPTHYTFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEADIFVGN 431

Query: 1343 SLVDMYTKCGSIEDGYRVFETMVERDRVSWNAMI 1444
            SL+DMY KCG +E+GY VF  M+ERD VSWNAMI
Sbjct: 432  SLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMI 465



 Score =  191 bits (486), Expect = 5e-46
 Identities = 114/379 (30%), Positives = 195/379 (51%), Gaps = 14/379 (3%)
 Frame = +2

Query: 101  PDSTLFANLLQLCLKSKSPRDVHRVHARLIKT-QFASEIFIQNRLIDVYAKCGCLNDAHN 277
            PD    A+++  C      +    VH R+ K  +  ++I + N  +D+YAKCG + +A  
Sbjct: 251  PDEITLASVISACASLSDIKAGQEVHGRVAKNDKLRNDIILSNAFVDMYAKCGMIKEARF 310

Query: 278  LFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEA 457
            +FD MP +N     S+IS +  +     A  +F  M E +  SWN+++SG+ Q+   EEA
Sbjct: 311  IFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMTERNIVSWNALISGYTQNGENEEA 370

Query: 458  LGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISK------SPHSSDVYMG 619
            L  F  +  E      Y++A+ L ACA L +L +G Q H  + K      S   +D+++G
Sbjct: 371  LSLFCLLKRESVCPTHYTFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEADIFVG 430

Query: 620  SALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIE 799
            ++LIDMY KCG V +   VF  M+E++ VSWN++I  + QNG  NEA+  F +M++ G +
Sbjct: 431  NSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFRKMLDSGEQ 490

Query: 800  PDEVTLASVVSACATLSAIEEGSQIHAHVIRS---DKFRDDLVLSNALVDMYAKCSKIKE 970
            PD +T+  V+SAC     ++EG    + + R       RD       +VD+  +   + E
Sbjct: 491  PDHITMIGVLSACGHAGLVDEGKHYFSSMTRDFGVTLLRDHY---TCMVDLLGRAGLLDE 547

Query: 971  ARLVFDRMPMR-NVVSETSMVSGYAKSMSVKVARLMFTKMTE---KNVISWNALIAGYSQ 1138
            A+ + + MPM+ + V   S+++      ++ +      K+ E    N   +  L   Y++
Sbjct: 548  AKSMIEEMPMQPDSVIWGSLLAACKVHKNITLGIYAAEKLLEVEASNSGPYVLLSNMYAE 607

Query: 1139 NGENEAALDLFCLLKKESV 1195
             G+    +++  L+ KE V
Sbjct: 608  RGQWSDVMNVRKLMTKEGV 626



 Score =  188 bits (477), Expect = 6e-45
 Identities = 133/487 (27%), Positives = 218/487 (44%), Gaps = 44/487 (9%)
 Frame = +2

Query: 116  FANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQNRLIDVYAKCGCLNDAHNLFDRMP 295
            FA+ L  C          ++H+ + K+   S++ I + L+D+Y+KCG +NDA        
Sbjct: 155  FASGLSACSSLNDMNRGIQIHSLVAKSPRLSDVHIGSALVDMYSKCGNVNDAQ------- 207

Query: 296  QKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEALGTFVE 475
                                    ++F  M + +  +WNS+++ + Q+    EAL  F  
Sbjct: 208  ------------------------QVFDEMGDRNVVTWNSLITCYEQNGPAAEALKVFHV 243

Query: 476  MHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSPH-SSDVYMGSALIDMYSKCG 652
            M       +E + AS +SACA L D+K G ++HG ++K+    +D+ + +A +DMY+KCG
Sbjct: 244  MLRASVEPDEITLASVISACASLSDIKAGQEVHGRVAKNDKLRNDIILSNAFVDMYAKCG 303

Query: 653  SVLDARKVFDSM-------------------------------IEKNIVSWNSLITCYEQ 739
             + +AR +FDSM                                E+NIVSWN+LI+ Y Q
Sbjct: 304  MIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMTERNIVSWNALISGYTQ 363

Query: 740  NGPANEAIRFFVRMMEFGIEPDEVTLASVVSACATLSAIEEGSQIHAHVIRSD-KFRD-- 910
            NG   EA+  F  +    + P   T A+++ ACA L+ +  G Q H HV++   KF+   
Sbjct: 364  NGENEEALSLFCLLKRESVCPTHYTFANILKACADLAELHLGMQAHVHVLKHGFKFQSGE 423

Query: 911  --DLVLSNALVDMYAKCSKIKEARLVFDRMPMRNVVSETSMVSGYAKSMSVKVARLMFTK 1084
              D+ + N+L+DMY KC  ++E                     GY          L+F K
Sbjct: 424  EADIFVGNSLIDMYVKCGCVEE---------------------GY----------LVFRK 452

Query: 1085 MTEKNVISWNALIAGYSQNGENEAALDLFCLLKKESVCPTHYTFGNIXXXXXXXXXXQLG 1264
            M E++ +SWNA+I G++QNG    AL+LF  +      P H T   +           L 
Sbjct: 453  MMERDCVSWNAMIIGFAQNGYGNEALELFRKMLDSGEQPDHITMIGV-----------LS 501

Query: 1265 KQAHTHVVKHGFRFVSGPKSDIFVG------NSLVDMYTKCGSIEDGYRVFETM-VERDR 1423
               H  +V  G  + S    D  V         +VD+  + G +++   + E M ++ D 
Sbjct: 502  ACGHAGLVDEGKHYFSSMTRDFGVTLLRDHYTCMVDLLGRAGLLDEAKSMIEEMPMQPDS 561

Query: 1424 VSWNAMI 1444
            V W +++
Sbjct: 562  VIWGSLL 568


>gb|EXC23679.1| hypothetical protein L484_015589 [Morus notabilis]
          Length = 652

 Score =  586 bits (1510), Expect = e-164
 Identities = 287/409 (70%), Positives = 339/409 (82%)
 Frame = +2

Query: 218  IQNRLIDVYAKCGCLNDAHNLFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPD 397
            +QNRLIDVY KCGCL DA  +FDRM ++NTF+ NSII    K+G LDEA+++F++MP+ D
Sbjct: 1    MQNRLIDVYGKCGCLEDARKVFDRMSERNTFSGNSIICVLMKAGLLDEAMQIFEMMPDHD 60

Query: 398  RCSWNSMVSGFAQHDRLEEALGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHG 577
            +C+WNS+V+GFAQH+   +AL   V+MH E+F+LN+YS+ SALSACAGL DL+MG QIH 
Sbjct: 61   QCTWNSLVAGFAQHNWHGDALECLVKMHGENFMLNDYSFGSALSACAGLKDLRMGIQIHA 120

Query: 578  SISKSPHSSDVYMGSALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANE 757
             ISKS +SS+VYMGSALIDMYSKCGSV  A++VFD M E+N VSWNSLI+CYEQNGPA+E
Sbjct: 121  VISKSRYSSNVYMGSALIDMYSKCGSVTCAQRVFDWMEERNRVSWNSLISCYEQNGPASE 180

Query: 758  AIRFFVRMMEFGIEPDEVTLASVVSACATLSAIEEGSQIHAHVIRSDKFRDDLVLSNALV 937
            AI  F RMM+ G+EPDEVTLASVVSACA+L A++EG QIH  V++ +KFRDDL+L NALV
Sbjct: 181  AIDVFRRMMDSGVEPDEVTLASVVSACASLLAVKEGLQIHGRVMKCEKFRDDLILGNALV 240

Query: 938  DMYAKCSKIKEARLVFDRMPMRNVVSETSMVSGYAKSMSVKVARLMFTKMTEKNVISWNA 1117
            DMYAKC +I EAR VFDRMP+RNVVSETSM+SGYAK+  VK ARLMFTKMTE+NV+SWNA
Sbjct: 241  DMYAKCGRIDEARWVFDRMPIRNVVSETSMISGYAKAAGVKAARLMFTKMTERNVVSWNA 300

Query: 1118 LIAGYSQNGENEAALDLFCLLKKESVCPTHYTFGNIXXXXXXXXXXQLGKQAHTHVVKHG 1297
            LI+GY+Q GENE AL LF LLK+ESV PTHYTFGN+          QLGKQAHTHVVKHG
Sbjct: 301  LISGYTQIGENEEALSLFLLLKRESVWPTHYTFGNLLNACANLADLQLGKQAHTHVVKHG 360

Query: 1298 FRFVSGPKSDIFVGNSLVDMYTKCGSIEDGYRVFETMVERDRVSWNAMI 1444
            FRF +G + DIFVGNSLVDMY KCGSI DG RVFE M ERD VSWNAMI
Sbjct: 361  FRFQAGEEPDIFVGNSLVDMYMKCGSIGDGCRVFENMAERDHVSWNAMI 409



 Score =  194 bits (494), Expect = 6e-47
 Identities = 108/323 (33%), Positives = 185/323 (57%), Gaps = 12/323 (3%)
 Frame = +2

Query: 71   VWRQVSDLHL-PDSTLFANLLQLCLKSKSPRDVHRVHARLIKTQ-FASEIFIQNRLIDVY 244
            V+R++ D  + PD    A+++  C    + ++  ++H R++K + F  ++ + N L+D+Y
Sbjct: 184  VFRRMMDSGVEPDEVTLASVVSACASLLAVKEGLQIHGRVMKCEKFRDDLILGNALVDMY 243

Query: 245  AKCGCLNDAHNLFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVS 424
            AKCG +++A  +FDRMP +N  +  S+IS + K+  +  A  +F  M E +  SWN+++S
Sbjct: 244  AKCGRIDEARWVFDRMPIRNVVSETSMISGYAKAAGVKAARLMFTKMTERNVVSWNALIS 303

Query: 425  GFAQHDRLEEALGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISK----- 589
            G+ Q    EEAL  F+ +  E      Y++ + L+ACA L DL++G Q H  + K     
Sbjct: 304  GYTQIGENEEALSLFLLLKRESVWPTHYTFGNLLNACANLADLQLGKQAHTHVVKHGFRF 363

Query: 590  -SPHSSDVYMGSALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIR 766
             +    D+++G++L+DMY KCGS+ D  +VF++M E++ VSWN++I  Y QNG   EA+ 
Sbjct: 364  QAGEEPDIFVGNSLVDMYMKCGSIGDGCRVFENMAERDHVSWNAMIVGYAQNGYGAEALG 423

Query: 767  FFVRMMEFGIEPDEVTLASVVSACATLSAIEEGSQIHAHVIRSDKFRDDLV----LSNAL 934
             F RM+  G +PD VT+  V+ AC+    + +G     H  RS     +LV        +
Sbjct: 424  IFSRMLASGEQPDHVTMIGVLCACSHAGLVVQG----RHYFRSMTEDHNLVPLKDHYTCM 479

Query: 935  VDMYAKCSKIKEARLVFDRMPMR 1003
            VD+  +   + EA+ + + MPM+
Sbjct: 480  VDLLGRAGHLDEAKNLVESMPMQ 502



 Score =  184 bits (466), Expect = 1e-43
 Identities = 136/487 (27%), Positives = 219/487 (44%), Gaps = 44/487 (9%)
 Frame = +2

Query: 116  FANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQNRLIDVYAKCGCLNDAHNLFDRMP 295
            F + L  C   K  R   ++HA + K++++S +++ + LID+Y+KCG +  A  +FD M 
Sbjct: 99   FGSALSACAGLKDLRMGIQIHAVISKSRYSSNVYMGSALIDMYSKCGSVTCAQRVFDWME 158

Query: 296  QKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEALGTFVE 475
            ++N  +WNS+IS + ++G   EAI +F+ M          M SG                
Sbjct: 159  ERNRVSWNSLISCYEQNGPASEAIDVFRRM----------MDSGVEP------------- 195

Query: 476  MHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISK-SPHSSDVYMGSALIDMYSKCG 652
                    +E + AS +SACA L+ +K G QIHG + K      D+ +G+AL+DMY+KCG
Sbjct: 196  --------DEVTLASVVSACASLLAVKEGLQIHGRVMKCEKFRDDLILGNALVDMYAKCG 247

Query: 653  SVLDARKVFD-------------------------------SMIEKNIVSWNSLITCYEQ 739
             + +AR VFD                                M E+N+VSWN+LI+ Y Q
Sbjct: 248  RIDEARWVFDRMPIRNVVSETSMISGYAKAAGVKAARLMFTKMTERNVVSWNALISGYTQ 307

Query: 740  NGPANEAIRFFVRMMEFGIEPDEVTLASVVSACATLSAIEEGSQIHAHVIRSDKFR---- 907
             G   EA+  F+ +    + P   T  ++++ACA L+ ++ G Q H HV++   FR    
Sbjct: 308  IGENEEALSLFLLLKRESVWPTHYTFGNLLNACANLADLQLGKQAHTHVVKHG-FRFQAG 366

Query: 908  --DDLVLSNALVDMYAKCSKIKEARLVFDRMPMRNVVSETSMVSGYAKSMSVKVARLMFT 1081
               D+ + N+LVDMY KC  I +   VF+ M  R+ VS  +M                  
Sbjct: 367  EEPDIFVGNSLVDMYMKCGSIGDGCRVFENMAERDHVSWNAM------------------ 408

Query: 1082 KMTEKNVISWNALIAGYSQNGENEAALDLFCLLKKESVCPTHYTFGNIXXXXXXXXXXQL 1261
                         I GY+QNG    AL +F  +      P H T   +            
Sbjct: 409  -------------IVGYAQNGYGAEALGIFSRMLASGEQPDHVTMIGVLCACSHAGLVVQ 455

Query: 1262 GKQAHTHVVKHGFRFVSG-----PKSDIFVGNSLVDMYTKCGSIEDGYRVFETM-VERDR 1423
            G        +H FR ++      P  D +    +VD+  + G +++   + E+M ++ D 
Sbjct: 456  G--------RHYFRSMTEDHNLVPLKDHY--TCMVDLLGRAGHLDEAKNLVESMPMQPDA 505

Query: 1424 VSWNAMI 1444
            V W +++
Sbjct: 506  VIWGSLL 512


>ref|XP_006359274.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like
            [Solanum tuberosum]
          Length = 709

 Score =  573 bits (1478), Expect = e-161
 Identities = 276/449 (61%), Positives = 346/449 (77%)
 Frame = +2

Query: 98   LPDSTLFANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQNRLIDVYAKCGCLNDAHN 277
            LP+ST FA +L   + SKS   +  VH R++KT F+SE+FI N+LID Y K G L  A  
Sbjct: 19   LPNSTPFAKILDSYINSKSQYVIQTVHCRILKTHFSSEVFINNKLIDTYGKSGMLKYAKK 78

Query: 278  LFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEA 457
            +FD+MP++NTFTWNS+I+A+T S  + EA  LF LMPEPD+CSWN MVS FAQ +  + +
Sbjct: 79   VFDKMPERNTFTWNSMINAYTASRLVFEAEELFYLMPEPDQCSWNLMVSSFAQCELFDSS 138

Query: 458  LGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSPHSSDVYMGSALIDM 637
            +   V MH EDFVLNEY Y S LSACAGL DL+MGTQ+H S++KS +S  VYMGSALIDM
Sbjct: 139  IEFLVRMHKEDFVLNEYGYGSGLSACAGLRDLRMGTQLHASVAKSRYSRSVYMGSALIDM 198

Query: 638  YSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIEPDEVTL 817
            YSK G+V  A KVF+ M E+N+VSWNSL++CYEQNGP  EA+  F RMMEFG +PDE TL
Sbjct: 199  YSKTGNVDCAAKVFNGMCERNVVSWNSLLSCYEQNGPVKEALVVFARMMEFGFKPDEKTL 258

Query: 818  ASVVSACATLSAIEEGSQIHAHVIRSDKFRDDLVLSNALVDMYAKCSKIKEARLVFDRMP 997
            ASVVSACA+L AI EG +IHA +++SDK RDDL++ NALVDMYAK  +I EAR +FDRMP
Sbjct: 259  ASVVSACASLCAIREGKEIHARILKSDKLRDDLIICNALVDMYAKFGRIAEARWIFDRMP 318

Query: 998  MRNVVSETSMVSGYAKSMSVKVARLMFTKMTEKNVISWNALIAGYSQNGENEAALDLFCL 1177
            +R+VVS+T +VSGYA+  SVK AR +F  M E+NV+SWNALIAGY+QNG NE AL+LF +
Sbjct: 319  VRSVVSDTCLVSGYARVASVKTARAVFLGMIERNVVSWNALIAGYTQNGNNEEALNLFLM 378

Query: 1178 LKKESVCPTHYTFGNIXXXXXXXXXXQLGKQAHTHVVKHGFRFVSGPKSDIFVGNSLVDM 1357
            LK+E V PTHYTFGN+          +LG+QAH H++KHGFRF +GP+ D+FVGN+L+DM
Sbjct: 379  LKREPVWPTHYTFGNLLNACANLADLKLGRQAHAHILKHGFRFQNGPEPDVFVGNALIDM 438

Query: 1358 YTKCGSIEDGYRVFETMVERDRVSWNAMI 1444
            Y KCGS+EDG  VF  M++RD VSWNA+I
Sbjct: 439  YMKCGSVEDGSCVFTKMLDRDWVSWNAII 467



 Score =  188 bits (477), Expect = 6e-45
 Identities = 112/342 (32%), Positives = 188/342 (54%), Gaps = 11/342 (3%)
 Frame = +2

Query: 101  PDSTLFANLLQLCLKSKSPRDVHRVHARLIKT-QFASEIFIQNRLIDVYAKCGCLNDAHN 277
            PD    A+++  C    + R+   +HAR++K+ +   ++ I N L+D+YAK G + +A  
Sbjct: 253  PDEKTLASVVSACASLCAIREGKEIHARILKSDKLRDDLIICNALVDMYAKFGRIAEARW 312

Query: 278  LFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEA 457
            +FDRMP ++  +   ++S + +   +  A  +F  M E +  SWN++++G+ Q+   EEA
Sbjct: 313  IFDRMPVRSVVSDTCLVSGYARVASVKTARAVFLGMIERNVVSWNALIAGYTQNGNNEEA 372

Query: 458  LGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISK------SPHSSDVYMG 619
            L  F+ +  E      Y++ + L+ACA L DLK+G Q H  I K      +    DV++G
Sbjct: 373  LNLFLMLKREPVWPTHYTFGNLLNACANLADLKLGRQAHAHILKHGFRFQNGPEPDVFVG 432

Query: 620  SALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIE 799
            +ALIDMY KCGSV D   VF  M++++ VSWN++I  Y QNG A EA+  F  M+  G +
Sbjct: 433  NALIDMYMKCGSVEDGSCVFTKMLDRDWVSWNAIIVGYAQNGHAMEALETFKVMLVSGEK 492

Query: 800  PDEVTLASVVSACATLSAIEEGSQIHAHVIRS---DKFRDDLVLSNALVDMYAKCSKIKE 970
            PD VT+  V+ AC+    +EEG Q    +        F+D       +VD+  K   ++E
Sbjct: 493  PDHVTMIGVLCACSHAGLVEEGRQYFYSMDTEYGLTPFKDHY---TCMVDLLGKAGCLEE 549

Query: 971  ARLVFDRMPM-RNVVSETSMVSGYAKSMSVKVARLMFTKMTE 1093
            A+ + + MPM  + V   S+++     M +++ + +  K+ E
Sbjct: 550  AKDLIESMPMPPDSVVWGSLLAACKIHMEIELGKYVAEKLLE 591



 Score =  177 bits (449), Expect = 1e-41
 Identities = 119/420 (28%), Positives = 203/420 (48%), Gaps = 38/420 (9%)
 Frame = +2

Query: 299  KNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEALGTFVEM 478
            ++ +  +++I  ++K+G +D A ++F  M E +  SWNS++S + Q+  ++EAL  F  M
Sbjct: 187  RSVYMGSALIDMYSKTGNVDCAAKVFNGMCERNVVSWNSLLSCYEQNGPVKEALVVFARM 246

Query: 479  HWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSPH-SSDVYMGSALIDMYSKCGS 655
                F  +E + AS +SACA L  ++ G +IH  I KS     D+ + +AL+DMY+K G 
Sbjct: 247  MEFGFKPDEKTLASVVSACASLCAIREGKEIHARILKSDKLRDDLIICNALVDMYAKFGR 306

Query: 656  VLDARKVFD-------------------------------SMIEKNIVSWNSLITCYEQN 742
            + +AR +FD                                MIE+N+VSWN+LI  Y QN
Sbjct: 307  IAEARWIFDRMPVRSVVSDTCLVSGYARVASVKTARAVFLGMIERNVVSWNALIAGYTQN 366

Query: 743  GPANEAIRFFVRMMEFGIEPDEVTLASVVSACATLSAIEEGSQIHAHVIRSD-KFRD--- 910
            G   EA+  F+ +    + P   T  ++++ACA L+ ++ G Q HAH+++   +F++   
Sbjct: 367  GNNEEALNLFLMLKREPVWPTHYTFGNLLNACANLADLKLGRQAHAHILKHGFRFQNGPE 426

Query: 911  -DLVLSNALVDMYAKCSKIKEARLVFDRMPMRNVVSETSMVSGYAKSMSVKVARLMFTKM 1087
             D+ + NAL+DMY KC  +++   V                               FTKM
Sbjct: 427  PDVFVGNALIDMYMKCGSVEDGSCV-------------------------------FTKM 455

Query: 1088 TEKNVISWNALIAGYSQNGENEAALDLFCLLKKESVCPTHYTFGNIXXXXXXXXXXQLGK 1267
             +++ +SWNA+I GY+QNG    AL+ F ++      P H T   +          + G+
Sbjct: 456  LDRDWVSWNAIIVGYAQNGHAMEALETFKVMLVSGEKPDHVTMIGVLCACSHAGLVEEGR 515

Query: 1268 QAHTHVVKHGFRFVSGPKSDIFVGNSLVDMYTKCGSIEDGYRVFETM-VERDRVSWNAMI 1444
            Q   +       +   P  D +    +VD+  K G +E+   + E+M +  D V W +++
Sbjct: 516  Q---YFYSMDTEYGLTPFKDHY--TCMVDLLGKAGCLEEAKDLIESMPMPPDSVVWGSLL 570


>ref|XP_004237174.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like
            [Solanum lycopersicum]
          Length = 709

 Score =  572 bits (1474), Expect = e-160
 Identities = 274/449 (61%), Positives = 347/449 (77%)
 Frame = +2

Query: 98   LPDSTLFANLLQLCLKSKSPRDVHRVHARLIKTQFASEIFIQNRLIDVYAKCGCLNDAHN 277
            L +ST FA +L   + +KS   +  VH R++KT F+SE+FI N+LID Y K G L  A N
Sbjct: 19   LSNSTPFAKILDSYINTKSQYVIQTVHCRVLKTHFSSEVFINNKLIDTYGKSGVLKYAKN 78

Query: 278  LFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEA 457
            +FD+MP++NTFTWNS+++A+T S  + EA  LF +MPEPD+CSWN MVS FAQ +  + +
Sbjct: 79   VFDKMPERNTFTWNSMMNAYTASRLVFEAEELFYMMPEPDQCSWNLMVSSFAQCELFDSS 138

Query: 458  LGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSPHSSDVYMGSALIDM 637
            +   V MH EDFVLNEY Y S LSACAGL D +MGTQ+H S++KS +S  VYMGSALIDM
Sbjct: 139  IEFLVRMHKEDFVLNEYGYGSGLSACAGLRDSRMGTQLHASVAKSRYSRSVYMGSALIDM 198

Query: 638  YSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIEPDEVTL 817
            YSK G V  A KVF+ M E+N+VSWNSL++CYEQNGP  EA+  F RMMEFG +PDE TL
Sbjct: 199  YSKTGDVDCAAKVFNGMCERNVVSWNSLLSCYEQNGPVKEALVVFARMMEFGFKPDEKTL 258

Query: 818  ASVVSACATLSAIEEGSQIHAHVIRSDKFRDDLVLSNALVDMYAKCSKIKEARLVFDRMP 997
            ASVVSACA+L AI EG +IHA +++SDK RDDL++ NALVDMYAK  +I EAR +FDRMP
Sbjct: 259  ASVVSACASLCAIREGKEIHAQIVKSDKLRDDLIICNALVDMYAKSGRIAEARWIFDRMP 318

Query: 998  MRNVVSETSMVSGYAKSMSVKVARLMFTKMTEKNVISWNALIAGYSQNGENEAALDLFCL 1177
            +R+VVS+T +VSGYA+  SVK AR +F+ M E+NV+SWNALIAGY+QNG NE AL+LF +
Sbjct: 319  VRSVVSDTCLVSGYARVASVKTARAVFSGMIERNVVSWNALIAGYTQNGNNEEALNLFLM 378

Query: 1178 LKKESVCPTHYTFGNIXXXXXXXXXXQLGKQAHTHVVKHGFRFVSGPKSDIFVGNSLVDM 1357
            LK+ESV PTHYTFGN+          +LG+QAHTH++KHGFRF +GP+ D+FVGN+L+DM
Sbjct: 379  LKRESVWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFRFQNGPEPDVFVGNALIDM 438

Query: 1358 YTKCGSIEDGYRVFETMVERDRVSWNAMI 1444
            Y KCGS+EDG  VF  M++RD VSWNA+I
Sbjct: 439  YMKCGSVEDGSCVFTKMLDRDWVSWNAVI 467



 Score =  189 bits (480), Expect = 3e-45
 Identities = 106/310 (34%), Positives = 175/310 (56%), Gaps = 10/310 (3%)
 Frame = +2

Query: 101  PDSTLFANLLQLCLKSKSPRDVHRVHARLIKT-QFASEIFIQNRLIDVYAKCGCLNDAHN 277
            PD    A+++  C    + R+   +HA+++K+ +   ++ I N L+D+YAK G + +A  
Sbjct: 253  PDEKTLASVVSACASLCAIREGKEIHAQIVKSDKLRDDLIICNALVDMYAKSGRIAEARW 312

Query: 278  LFDRMPQKNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEA 457
            +FDRMP ++  +   ++S + +   +  A  +F  M E +  SWN++++G+ Q+   EEA
Sbjct: 313  IFDRMPVRSVVSDTCLVSGYARVASVKTARAVFSGMIERNVVSWNALIAGYTQNGNNEEA 372

Query: 458  LGTFVEMHWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISK------SPHSSDVYMG 619
            L  F+ +  E      Y++ + L+ACA L DLK+G Q H  I K      +    DV++G
Sbjct: 373  LNLFLMLKRESVWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFRFQNGPEPDVFVG 432

Query: 620  SALIDMYSKCGSVLDARKVFDSMIEKNIVSWNSLITCYEQNGPANEAIRFFVRMMEFGIE 799
            +ALIDMY KCGSV D   VF  M++++ VSWN++I  Y QNG A EA+  F  M+ +G +
Sbjct: 433  NALIDMYMKCGSVEDGSCVFTKMLDRDWVSWNAVIVGYAQNGHAMEALETFNAMLVYGEK 492

Query: 800  PDEVTLASVVSACATLSAIEEGSQIHAHVIRS---DKFRDDLVLSNALVDMYAKCSKIKE 970
            PD VT+  V+ AC+    +EEG +    + R      F+D       +VD+  K   ++E
Sbjct: 493  PDHVTMIGVLCACSHAGLVEEGRRYFYSMDRDYGLTPFKDHY---TCMVDLLGKAGCLEE 549

Query: 971  ARLVFDRMPM 1000
            A+ + + MPM
Sbjct: 550  AKDLIESMPM 559



 Score =  175 bits (444), Expect = 4e-41
 Identities = 120/426 (28%), Positives = 203/426 (47%), Gaps = 44/426 (10%)
 Frame = +2

Query: 299  KNTFTWNSIISAFTKSGFLDEAIRLFKLMPEPDRCSWNSMVSGFAQHDRLEEALGTFVEM 478
            ++ +  +++I  ++K+G +D A ++F  M E +  SWNS++S + Q+  ++EAL  F  M
Sbjct: 187  RSVYMGSALIDMYSKTGDVDCAAKVFNGMCERNVVSWNSLLSCYEQNGPVKEALVVFARM 246

Query: 479  HWEDFVLNEYSYASALSACAGLMDLKMGTQIHGSISKSPH-SSDVYMGSALIDMYSKCGS 655
                F  +E + AS +SACA L  ++ G +IH  I KS     D+ + +AL+DMY+K G 
Sbjct: 247  MEFGFKPDEKTLASVVSACASLCAIREGKEIHAQIVKSDKLRDDLIICNALVDMYAKSGR 306

Query: 656  VLDARKVFD-------------------------------SMIEKNIVSWNSLITCYEQN 742
            + +AR +FD                                MIE+N+VSWN+LI  Y QN
Sbjct: 307  IAEARWIFDRMPVRSVVSDTCLVSGYARVASVKTARAVFSGMIERNVVSWNALIAGYTQN 366

Query: 743  GPANEAIRFFVRMMEFGIEPDEVTLASVVSACATLSAIEEGSQIHAHVIRSD-KFRD--- 910
            G   EA+  F+ +    + P   T  ++++ACA L+ ++ G Q H H+++   +F++   
Sbjct: 367  GNNEEALNLFLMLKRESVWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFRFQNGPE 426

Query: 911  -DLVLSNALVDMYAKCSKIKEARLVFDRMPMRNVVSETSMVSGYAKSMSVKVARLMFTKM 1087
             D+ + NAL+DMY KC  +++   V                               FTKM
Sbjct: 427  PDVFVGNALIDMYMKCGSVEDGSCV-------------------------------FTKM 455

Query: 1088 TEKNVISWNALIAGYSQNGENEAALDLFCLLKKESVCPTHYTFGNIXXXXXXXXXXQLGK 1267
             +++ +SWNA+I GY+QNG    AL+ F  +      P H T   +           L  
Sbjct: 456  LDRDWVSWNAVIVGYAQNGHAMEALETFNAMLVYGEKPDHVTMIGV-----------LCA 504

Query: 1268 QAHTHVVKHGFRFVSGPKSDIFVG------NSLVDMYTKCGSIEDGYRVFETM-VERDRV 1426
             +H  +V+ G R+      D  +         +VD+  K G +E+   + E+M +  D V
Sbjct: 505  CSHAGLVEEGRRYFYSMDRDYGLTPFKDHYTCMVDLLGKAGCLEEAKDLIESMPMPPDSV 564

Query: 1427 SWNAMI 1444
             W +++
Sbjct: 565  VWGSLL 570