BLASTX nr result

ID: Akebia22_contig00025602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00025602
         (1008 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    69   2e-22
gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]      66   1e-21
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]               59   2e-19
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal...    59   2e-19
gb|AAD12028.1| putative non-LTR retroelement reverse transcripta...    55   6e-18
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    60   6e-18
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...    51   2e-17
gb|AAP54617.2| retrotransposon protein, putative, unclassified [...    51   2e-17
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas...    63   5e-17
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621...    58   2e-16
ref|XP_006482658.1| PREDICTED: cytochrome P450 89A2-like [Citrus...    61   2e-16
gb|ABB46931.2| retrotransposon protein, putative, unclassified [...    65   3e-16
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...    62   5e-16
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677...    62   5e-16
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]              53   6e-16
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]               53   6e-16
ref|NP_001175161.1| Os07g0417700 [Oryza sativa Japonica Group] g...    60   8e-16
gb|ABA94593.2| retrotransposon protein, putative, unclassified [...    59   2e-15
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    50   2e-15
gb|EEE52364.1| hypothetical protein OsJ_34428 [Oryza sativa Japo...    59   2e-15

>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 68.9 bits (167), Expect(4) = 2e-22
 Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
 Frame = +2

Query: 707  YFRHGKMLKDVNATLLCIIPKEENAKRLEEFKPIALCNFVYKI----XXXXXXXXXXXXV 874
            +FR G++L   N+T + ++PK+ NA R+ EF+PI+ CN +YK+                +
Sbjct: 492  FFRSGRLLGQWNSTAVTMVPKKPNADRITEFRPISCCNAIYKVISKLLARRLENILPLWI 551

Query: 875  FPHQSTFVKGRKI*DEVILAYEMVHNFHLSKSPKSICA*IDLRK 1006
             P QS FVKGR + + V+LA E+V  F  +         +DLRK
Sbjct: 552  SPSQSAFVKGRLLTENVLLATELVQGFGQANISSRGVLKVDLRK 595



 Score = 43.9 bits (102), Expect(4) = 2e-22
 Identities = 21/46 (45%), Positives = 26/46 (56%)
 Frame = +3

Query: 588 KSLIFESPRNKAPGPDGFGMEFFTFFWDIVGKNVCDVVIDISDMGR 725
           KS  F  P NK+PGPDG+  EFF   W IVG ++   V +    GR
Sbjct: 452 KSEFFALPSNKSPGPDGYTSEFFKKTWSIVGPSLIAAVQEFFRSGR 497



 Score = 35.0 bits (79), Expect(4) = 2e-22
 Identities = 22/68 (32%), Positives = 34/68 (50%)
 Frame = +1

Query: 325 RKSRV*GLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDGRRARATRFYSRMF 504
           +KSRV  L+ GD N+ FF+  + +  A N I  L    G  I + D  +     F+  +F
Sbjct: 352 QKSRVLWLKCGDSNTTFFHRMMTARRAINEIHYLLDQTGRRIENTDELQTHCVDFFKELF 411

Query: 505 QNSSPNVS 528
            +SS  +S
Sbjct: 412 GSSSHLIS 419



 Score = 25.0 bits (53), Expect(4) = 2e-22
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +2

Query: 92  GNPMLWSTHKLHAVKLALRAWNREYFDFVQYRNIQAKGN 208
           G+ M   + K   +K  +R +NRE++  ++ R +QA  N
Sbjct: 274 GSAMFTLSKKSKFLKGTIRTFNREHYSGLEKRVVQAAQN 312


>gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]
          Length = 381

 Score = 65.9 bits (159), Expect(4) = 1e-21
 Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
 Frame = +2

Query: 707 YFRHGKMLKDVNATLLCIIPKEENAKRLEEFKPIALCNFVY----KIXXXXXXXXXXXXV 874
           +F  G+   D+N T LC+IPK  N   +++F+PIALCN +Y    KI            +
Sbjct: 276 FFNTGEFYSDLNHTNLCLIPKITNPITMKDFRPIALCNVMYKIISKILSLCMKSILHFVI 335

Query: 875 FPHQSTFVKGRKI*DEVILAYEMVHNFHLSK 967
             +QS F+ GR I D V LA+E+VH+  + K
Sbjct: 336 SENQSGFIPGRHITDNVFLAHEVVHSLKVRK 366



 Score = 47.0 bits (110), Expect(4) = 1e-21
 Identities = 23/64 (35%), Positives = 37/64 (57%)
 Frame = +1

Query: 322 KRKSRV*GLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDGRRARATRFYSRM 501
           + KSR+  L  GDRN RFF++S  +  A+N I+ ++ N GE +         A R++S +
Sbjct: 139 RNKSRIQWLTYGDRNIRFFHASTKNRRAKNKILSIQNNLGEEVFGNKEISKEALRYFSEI 198

Query: 502 FQNS 513
           F +S
Sbjct: 199 FTSS 202



 Score = 36.6 bits (83), Expect(4) = 1e-21
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +3

Query: 597 IFESPRNKAPGPDGFGMEFFTFFWDIVGKNVCDVV 701
           +F     +APGPDG    F+  +WDIVG  V + V
Sbjct: 239 VFSIGATRAPGPDGLTASFYQTYWDIVGPAVVEEV 273



 Score = 21.2 bits (43), Expect(4) = 1e-21
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 297 DEESFYRKKKKIKSL 341
           DEE+F+R K +I+ L
Sbjct: 133 DEEAFWRNKSRIQWL 147


>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score = 58.9 bits (141), Expect(3) = 2e-19
 Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
 Frame = +2

Query: 707  YFRHGKMLKDVNATLLCIIPKEENAKRLEEFKPIALCNFVYK----IXXXXXXXXXXXXV 874
            +F  G + +  NAT + +IPK   A RL +F+P+A C  +YK    I            V
Sbjct: 536  FFISGNLPRGFNATAITLIPKVTGADRLTQFRPVACCTTIYKVITRIISRRLKLFIDQAV 595

Query: 875  FPHQSTFVKGRKI*DEVILAYEMVHNFHLSKSPKSICA*IDLRK 1006
              +Q  F+KGR + + V+LA E+V NF         C  +D+ K
Sbjct: 596  QANQVGFIKGRLLCENVLLASELVDNFEADGETTRGCLQVDISK 639



 Score = 44.3 bits (103), Expect(3) = 2e-19
 Identities = 19/32 (59%), Positives = 23/32 (71%)
 Frame = +3

Query: 594 LIFESPRNKAPGPDGFGMEFFTFFWDIVGKNV 689
           ++F  PRNKAPGPDGF +EFF   W IV  +V
Sbjct: 498 VLFSMPRNKAPGPDGFPVEFFIEAWAIVKSSV 529



 Score = 40.4 bits (93), Expect(3) = 2e-19
 Identities = 25/80 (31%), Positives = 44/80 (55%)
 Frame = +1

Query: 322 KRKSRV*GLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDGRRARATRFYSRM 501
           ++KSR+  L EGD N+RFF+ ++ ++ A N I  L  + G  + + D  +     +YS +
Sbjct: 395 RQKSRIRWLHEGDANTRFFHRAVIAHQATNLIKFLRGDDGFRVENVDQIKGMLIAYYSHL 454

Query: 502 FQNSSPNVSFQIPFNSKFIE 561
               S NV+   PF+ + I+
Sbjct: 455 LGIPSENVT---PFSVEKIK 471


>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 910

 Score = 58.9 bits (141), Expect(3) = 2e-19
 Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
 Frame = +2

Query: 707  YFRHGKMLKDVNATLLCIIPKEENAKRLEEFKPIALCNFVYK----IXXXXXXXXXXXXV 874
            +F  G + +  NAT + +IPK   A RL +F+P+A C  +YK    I            V
Sbjct: 493  FFISGNLPRGFNATAITLIPKVTGADRLTQFRPVACCTTIYKVITRIISRRLKLFIDQAV 552

Query: 875  FPHQSTFVKGRKI*DEVILAYEMVHNFHLSKSPKSICA*IDLRK 1006
              +Q  F+KGR + + V+LA E+V NF         C  +D+ K
Sbjct: 553  QANQVGFIKGRLLCENVLLASELVDNFEADGETTRGCLQVDISK 596



 Score = 44.3 bits (103), Expect(3) = 2e-19
 Identities = 19/32 (59%), Positives = 23/32 (71%)
 Frame = +3

Query: 594 LIFESPRNKAPGPDGFGMEFFTFFWDIVGKNV 689
           ++F  PRNKAPGPDGF +EFF   W IV  +V
Sbjct: 455 VLFSMPRNKAPGPDGFPVEFFIEAWAIVKSSV 486



 Score = 40.4 bits (93), Expect(3) = 2e-19
 Identities = 25/80 (31%), Positives = 44/80 (55%)
 Frame = +1

Query: 322 KRKSRV*GLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDGRRARATRFYSRM 501
           ++KSR+  L EGD N+RFF+ ++ ++ A N I  L  + G  + + D  +     +YS +
Sbjct: 352 RQKSRIRWLHEGDANTRFFHRAVIAHQATNLIKFLRGDDGFRVENVDQIKGMLIAYYSHL 411

Query: 502 FQNSSPNVSFQIPFNSKFIE 561
               S NV+   PF+ + I+
Sbjct: 412 LGIPSENVT---PFSVEKIK 428


>gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1447

 Score = 55.5 bits (132), Expect(3) = 6e-18
 Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
 Frame = +2

Query: 677  GEECL*CSYRYFRHGKMLKDVNATLLCIIPKEENAKRLEEFKPIALCNFVY----KIXXX 844
            G E +     +F  G + K +N T+L +IPK++ AK +++++PI+ CN +Y    KI   
Sbjct: 897  GNEFILAIQSFFAKGFLPKGINTTILALIPKKKEAKEMKDYRPISCCNVIYKVISKIIAN 956

Query: 845  XXXXXXXXXVFPHQSTFVKGRKI*DEVILA 934
                     +  +QS FVK R + + V+LA
Sbjct: 957  RLKLVPPKFIAGNQSAFVKDRLLIENVLLA 986



 Score = 42.4 bits (98), Expect(3) = 6e-18
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = +3

Query: 588 KSLIFESPRNKAPGPDGFGMEFFTFFWDIVG 680
           K ++F  P +K+PGPDGF  EFF   W+I+G
Sbjct: 867 KKVLFSMPNDKSPGPDGFTSEFFKATWEILG 897



 Score = 40.4 bits (93), Expect(3) = 6e-18
 Identities = 19/62 (30%), Positives = 35/62 (56%)
 Frame = +1

Query: 322 KRKSRV*GLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDGRRARATRFYSRM 501
           K+KS++  L  GD+N++ F+ ++ +  A+N I E++   G +    D  +A A RF+   
Sbjct: 766 KKKSKLHWLDGGDKNNKAFHRAVVTREAQNSISEIQCQDGSVTAKGDEIKAYAERFFREF 825

Query: 502 FQ 507
            Q
Sbjct: 826 LQ 827


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 60.1 bits (144), Expect(3) = 6e-18
 Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
 Frame = +2

Query: 677  GEECL*CSYRYFRHGKMLKDVNATLLCIIPKEENAKRLEEFKPIALCNFVY----KIXXX 844
            G+E       +F  G + K +N+T+L +IPK+  A+ +++++PI+ CN +Y    KI   
Sbjct: 489  GDEFTLAVQSFFTKGFLPKGINSTILALIPKKTEAREMKDYRPISCCNVLYKVISKIIAN 548

Query: 845  XXXXXXXXXVFPHQSTFVKGRKI*DEVILAYEMVHNFHLSKSPKSICA*IDLRK 1006
                     +  +QS FVK R + + ++LA E+V ++H           ID+ K
Sbjct: 549  RLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISTRCAIKIDISK 602



 Score = 40.4 bits (93), Expect(3) = 6e-18
 Identities = 14/31 (45%), Positives = 22/31 (70%)
 Frame = +3

Query: 588 KSLIFESPRNKAPGPDGFGMEFFTFFWDIVG 680
           + ++F  P +K+PGPDG+  EFF   W+I+G
Sbjct: 459 RKVLFRMPSDKSPGPDGYTSEFFKATWEIIG 489



 Score = 37.7 bits (86), Expect(3) = 6e-18
 Identities = 20/62 (32%), Positives = 35/62 (56%)
 Frame = +1

Query: 322 KRKSRV*GLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDGRRARATRFYSRM 501
           K+KS++   + GD+N++ F+ + A+  A N I E+ +N G +    D  +A A RF+   
Sbjct: 358 KQKSKLHWCQVGDQNTKAFHRAAAAREAHNTIREILSNDGIVKTKGDEIKAEAERFFREF 417

Query: 502 FQ 507
            Q
Sbjct: 418 LQ 419


>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
           Japonica Group]
          Length = 1382

 Score = 51.2 bits (121), Expect(3) = 2e-17
 Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
 Frame = +2

Query: 746 TLLCIIPKEENAKRLEEFKPIALCNFVYKI----XXXXXXXXXXXXVFPHQSTFVKGRKI 913
           +++ +IPK  NA  L +F+PI+LCN +YKI                V   QS FV GR I
Sbjct: 503 SVVVLIPKVNNASHLSKFRPISLCNVLYKIASKVLANRLKPFLPDIVSEFQSAFVPGRLI 562

Query: 914 *DEVILAYEMVH 949
            D  ++AYE +H
Sbjct: 563 TDSALVAYECLH 574



 Score = 46.6 bits (109), Expect(3) = 2e-17
 Identities = 23/63 (36%), Positives = 37/63 (58%)
 Frame = +1

Query: 322 KRKSRV*GLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDGRRARATRFYSRM 501
           +++SRV  LREGDRN+ FF++  ++    N I EL  + G   I ++G +  A  FY  +
Sbjct: 353 RQRSRVDWLREGDRNTAFFHARASARRRTNRIKELVRDDGSRCISQEGIKRMAEVFYENL 412

Query: 502 FQN 510
           F +
Sbjct: 413 FSS 415



 Score = 38.9 bits (89), Expect(3) = 2e-17
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = +3

Query: 588 KSLIFESPRNKAPGPDGFGMEFFTFFWDIVGKNVCDVV 701
           K+ +F+    KAPGPDGF   F+   W I+ +++C+ V
Sbjct: 450 KTALFQMGSTKAPGPDGFPALFYQTHWGILEEHICNAV 487


>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
           protein OsJ_32156 [Oryza sativa Japonica Group]
          Length = 1339

 Score = 51.2 bits (121), Expect(3) = 2e-17
 Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
 Frame = +2

Query: 746 TLLCIIPKEENAKRLEEFKPIALCNFVYKI----XXXXXXXXXXXXVFPHQSTFVKGRKI 913
           +++ +IPK  NA  L +F+PI+LCN +YKI                V   QS FV GR I
Sbjct: 460 SVVVLIPKVNNASHLSKFRPISLCNVLYKIASKVLANRLKPFLPDIVSEFQSAFVPGRLI 519

Query: 914 *DEVILAYEMVH 949
            D  ++AYE +H
Sbjct: 520 TDSALVAYECLH 531



 Score = 46.6 bits (109), Expect(3) = 2e-17
 Identities = 23/63 (36%), Positives = 37/63 (58%)
 Frame = +1

Query: 322 KRKSRV*GLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDGRRARATRFYSRM 501
           +++SRV  LREGDRN+ FF++  ++    N I EL  + G   I ++G +  A  FY  +
Sbjct: 310 RQRSRVDWLREGDRNTAFFHARASARRRTNRIKELVRDDGSRCISQEGIKRMAEVFYENL 369

Query: 502 FQN 510
           F +
Sbjct: 370 FSS 372



 Score = 38.9 bits (89), Expect(3) = 2e-17
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = +3

Query: 588 KSLIFESPRNKAPGPDGFGMEFFTFFWDIVGKNVCDVV 701
           K+ +F+    KAPGPDGF   F+   W I+ +++C+ V
Sbjct: 407 KTALFQMGSTKAPGPDGFPALFYQTHWGILEEHICNAV 444


>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
            truncatula]
          Length = 402

 Score = 62.8 bits (151), Expect(3) = 5e-17
 Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
 Frame = +2

Query: 707  YFRHGKMLKDVNATLLCIIPKEENAKRLEEFKPIALCNFVY----KIXXXXXXXXXXXXV 874
            +F+ G M K +N T + ++PKE N   ++ F+PIA C+ +Y    KI            V
Sbjct: 167  FFKTGFMPKIINCTYMTLLPKEVNVTSVKNFRPIACCSVIYKIISKILTSRMQGVLNSVV 226

Query: 875  FPHQSTFVKGRKI*DEVILAYEMVHNFHLSKSPKSICA*IDLRK 1006
              +QS FVKGR I D +IL++E+V ++            IDL+K
Sbjct: 227  SENQSAFVKGRVIFDNIILSHELVKSYSRKGISPRCMVKIDLQK 270



 Score = 43.9 bits (102), Expect(3) = 5e-17
 Identities = 17/45 (37%), Positives = 28/45 (62%)
 Frame = +3

Query: 588 KSLIFESPRNKAPGPDGFGMEFFTFFWDIVGKNVCDVVIDISDMG 722
           K+++F    +KAPG DG+ + FF   W+I+G +V D ++D    G
Sbjct: 127 KNVLFSMDSSKAPGIDGYNVHFFKCSWNIIGDSVIDAILDFFKTG 171



 Score = 28.5 bits (62), Expect(3) = 5e-17
 Identities = 17/63 (26%), Positives = 30/63 (47%)
 Frame = +1

Query: 325 RKSRV*GLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDGRRARATRFYSRMF 504
           +KSR   ++ GD N++FF++       +N I  L T  G  I   +  +     FY ++ 
Sbjct: 29  QKSRANWIQLGDSNTKFFHAYAKERRCQNNIKFLITEDGTRIDKHNLIKEEIRGFYLKLM 88

Query: 505 QNS 513
            +S
Sbjct: 89  GSS 91


>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
          Length = 2303

 Score = 57.8 bits (138), Expect(3) = 2e-16
 Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
 Frame = +2

Query: 719 GKMLKDVNATLLCIIPKEENAKRLEEFKPIALCNFVYKI----XXXXXXXXXXXXVFPHQ 886
           G  L  +N T + +IPK    K++ EF+PI+LCN +Y+I                + P Q
Sbjct: 456 GGNLSALNHTFIALIPKTTKPKKVTEFRPISLCNVIYRIVAKTIANRLKPILSQIISPTQ 515

Query: 887 STFVKGRKI*DEVILAYEMVHNFHLSKSPK 976
           S F+  R I D VI+ YE +H    S+  K
Sbjct: 516 SAFIPNRLISDNVIIGYECLHKIRHSQGKK 545



 Score = 45.8 bits (107), Expect(3) = 2e-16
 Identities = 21/69 (30%), Positives = 39/69 (56%)
 Frame = +1

Query: 322 KRKSRV*GLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDGRRARATRFYSRM 501
           +++SR   L+EGDRN+++F+S  ++   +N I  +E + G+   D+         ++  +
Sbjct: 313 RQRSRAEWLKEGDRNTKYFHSKASARRRKNKIWGIENSHGQWTEDQREVEKEFCEYFQNL 372

Query: 502 FQNSSPNVS 528
           F  SSPN S
Sbjct: 373 FTTSSPNQS 381



 Score = 29.6 bits (65), Expect(3) = 2e-16
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +3

Query: 618 KAPGPDGFGMEFFTFFWDIVGKNVCDVVIDISDMG 722
           KAPGPDG    FF   W  V  +V    + I + G
Sbjct: 422 KAPGPDGLPAAFFQKHWQTVRSSVIGTCMHILNEG 456


>ref|XP_006482658.1| PREDICTED: cytochrome P450 89A2-like [Citrus sinensis]
          Length = 809

 Score = 61.2 bits (147), Expect(3) = 2e-16
 Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
 Frame = +2

Query: 710 FRHGKMLKDVNATLLCIIPKEENAKRLEEFKPIALCNFVY----KIXXXXXXXXXXXXVF 877
           F    +LKD+N TLL +IPK ++   L+ ++PI+LC   Y    KI            + 
Sbjct: 717 FSSASILKDINTTLLVLIPKVDHPVNLKMYRPISLCTVAYKTISKIVANRLQALMPILIG 776

Query: 878 PHQSTFVKGRKI*DEVILAYEMVHNFHLSKSPK 976
           P Q++FV GR I D +++A E++H+       K
Sbjct: 777 PQQTSFVPGRHITDNIVIAQEVIHSMRKKAGKK 809



 Score = 41.6 bits (96), Expect(3) = 2e-16
 Identities = 20/64 (31%), Positives = 36/64 (56%)
 Frame = +1

Query: 325 RKSRV*GLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDGRRARATRFYSRMF 504
           +KSR   L +GDRN+ +F+    +   RN I  ++   GE I+D +  +  AT F+S ++
Sbjct: 580 QKSRKEWLIQGDRNTAYFHQKTLARRRRNRITTIQNANGEWIVDNEIIKQHATAFFSTLY 639

Query: 505 QNSS 516
            + +
Sbjct: 640 TSET 643



 Score = 30.0 bits (66), Expect(3) = 2e-16
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +3

Query: 588 KSLIFESPRNKAPGPDGFGMEFFTFFWDIVGKNVCDVV 701
           +  IF     KAPG DG    F+   W IVG + C  +
Sbjct: 676 RQTIFSMKPLKAPGVDGLHAIFYQSQWHIVGHSFCKFI 713


>gb|ABB46931.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1853

 Score = 65.1 bits (157), Expect(3) = 3e-16
 Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
 Frame = +2

Query: 707  YFRHGKMLKDVNATLLCIIPKEENAKRLEEFKPIALCNFVYKI----XXXXXXXXXXXXV 874
            +F  G M   VN T + +IPK E  + L++F+PI+LCN VYKI                V
Sbjct: 1010 FFSLGTMPSGVNETAIVLIPKTEQPQELKDFRPISLCNVVYKIVSKCLVNRLRPILDDLV 1069

Query: 875  FPHQSTFVKGRKI*DEVILAYEMVHNFHLSKSPKS 979
              +QS FV GR I D  ++A+E  H+   +K+P++
Sbjct: 1070 SQNQSAFVPGRLITDNALIAFEYFHHIQRNKNPEN 1104



 Score = 37.4 bits (85), Expect(3) = 3e-16
 Identities = 18/60 (30%), Positives = 32/60 (53%)
 Frame = +1

Query: 325  RKSRV*GLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDGRRARATRFYSRMF 504
            ++SR+  L+EGDRN+RFF++       +N I +L  +   +          AT ++ R+F
Sbjct: 874  QRSRIAWLKEGDRNTRFFHNKAVWRAKKNKITKLRDSDDTVHSTTKELERMATEYFQRLF 933



 Score = 30.0 bits (66), Expect(3) = 3e-16
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +3

Query: 597  IFESPRNKAPGPDGFGMEFFTFFWDIVGKNVCDVVIDISDMG 722
            +F+    KAPGPDGF   F+   W I+  ++   V +   +G
Sbjct: 973  LFQIGPLKAPGPDGFPGRFYQRNWAILKDDIVRAVQEFFSLG 1014


>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
            42.57) [Arabidopsis thaliana]
          Length = 1662

 Score = 62.0 bits (149), Expect(3) = 5e-16
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
 Frame = +2

Query: 707  YFRHGKMLKDVNATLLCIIPKEENAKRLEEFKPIALCNFVYKI----XXXXXXXXXXXXV 874
            +FR   M + +N T +C+IPK  N + L +++PIALCN +YKI                V
Sbjct: 856  FFRTSYMKQSINHTNICMIPKITNPETLSDYRPIALCNVLYKIISKCLVERLKGHLDAIV 915

Query: 875  FPHQSTFVKGRKI*DEVILAYEMVHNFHLSK 967
               Q+ F+ GR + D V++A+EM+H+    K
Sbjct: 916  SDSQAAFIPGRLVNDNVMIAHEMMHSLKTRK 946



 Score = 36.6 bits (83), Expect(3) = 5e-16
 Identities = 16/69 (23%), Positives = 40/69 (57%)
 Frame = +1

Query: 322 KRKSRV*GLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDGRRARATRFYSRM 501
           ++KSR   ++EGDRN+ FF++   +  + N ++ ++  +G +   +      A  F++++
Sbjct: 719 QQKSRNQWMKEGDRNTEFFHACTKTRFSVNRLVTIKDEEGMIYRGDKEIGVHAQEFFTKV 778

Query: 502 FQNSSPNVS 528
           ++++   VS
Sbjct: 779 YESNGRPVS 787



 Score = 33.1 bits (74), Expect(3) = 5e-16
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +3

Query: 615 NKAPGPDGFGMEFFTFFWDIVGKNV 689
           +KAPGPDG    F+   W+IVG +V
Sbjct: 825 DKAPGPDGLTARFYKSCWEIVGPDV 849


>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
            putative protein [Arabidopsis thaliana]
          Length = 1294

 Score = 62.0 bits (149), Expect(3) = 5e-16
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
 Frame = +2

Query: 707  YFRHGKMLKDVNATLLCIIPKEENAKRLEEFKPIALCNFVYKI----XXXXXXXXXXXXV 874
            +FR   M + +N T +C+IPK  N + L +++PIALCN +YKI                V
Sbjct: 836  FFRTSYMKQSINHTNICMIPKITNPETLSDYRPIALCNVLYKIISKCLVERLKGHLDAIV 895

Query: 875  FPHQSTFVKGRKI*DEVILAYEMVHNFHLSK 967
               Q+ F+ GR + D V++A+EM+H+    K
Sbjct: 896  SDSQAAFIPGRLVNDNVMIAHEMMHSLKTRK 926



 Score = 36.6 bits (83), Expect(3) = 5e-16
 Identities = 16/69 (23%), Positives = 40/69 (57%)
 Frame = +1

Query: 322 KRKSRV*GLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDGRRARATRFYSRM 501
           ++KSR   ++EGDRN+ FF++   +  + N ++ ++  +G +   +      A  F++++
Sbjct: 699 QQKSRNQWMKEGDRNTEFFHACTKTRFSVNRLVTIKDEEGMIYRGDKEIGVHAQEFFTKV 758

Query: 502 FQNSSPNVS 528
           ++++   VS
Sbjct: 759 YESNGRPVS 767



 Score = 33.1 bits (74), Expect(3) = 5e-16
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +3

Query: 615 NKAPGPDGFGMEFFTFFWDIVGKNV 689
           +KAPGPDG    F+   W+IVG +V
Sbjct: 805 DKAPGPDGLTARFYKSCWEIVGPDV 829


>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
          Length = 1270

 Score = 52.8 bits (125), Expect(3) = 6e-16
 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
 Frame = +2

Query: 704 RYFRHGKMLKDVNATLLCIIPKEENAKRLEEFKPIALCNFVY----KIXXXXXXXXXXXX 871
           ++F  G M  + N T LC+IPK ++   + + +PI+LC+ +Y    KI            
Sbjct: 436 KFFADGIMPAEWNYTHLCLIPKTQHPTEMVDLRPISLCSVLYKIISKIMAKRLQPWLPEI 495

Query: 872 VFPHQSTFVKGRKI*DEVILAYEMVHN 952
           V   QS FV  R I D +++A+E+VH+
Sbjct: 496 VSDTQSAFVSERLITDNILVAHELVHS 522



 Score = 44.7 bits (104), Expect(3) = 6e-16
 Identities = 21/67 (31%), Positives = 40/67 (59%)
 Frame = +1

Query: 322 KRKSRV*GLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDGRRARATRFYSRM 501
           K+KSR   LR G+RNS++F++++  N  R  I +L+   G +   E  +   A  ++  +
Sbjct: 300 KQKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQTSEAAKGEVAAAYFGNL 359

Query: 502 FQNSSPN 522
           F++S+P+
Sbjct: 360 FKSSNPS 366



 Score = 33.9 bits (76), Expect(3) = 6e-16
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = +3

Query: 588 KSLIFESPRNKAPGPDGFGMEFFTFFWDIVGKNVCDVV 701
           K  +F      APGPDG    FF  +W  VG  V   V
Sbjct: 397 KEAVFSIKPASAPGPDGMSALFFQHYWSTVGNQVTSEV 434


>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
          Length = 1254

 Score = 52.8 bits (125), Expect(3) = 6e-16
 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
 Frame = +2

Query: 704 RYFRHGKMLKDVNATLLCIIPKEENAKRLEEFKPIALCNFVY----KIXXXXXXXXXXXX 871
           ++F  G M  + N T LC+IPK ++   + + +PI+LC+ +Y    KI            
Sbjct: 439 KFFADGIMPAEWNYTHLCLIPKTQHPTEMVDLRPISLCSVLYKIISKIMAKRLQPWLPEI 498

Query: 872 VFPHQSTFVKGRKI*DEVILAYEMVHN 952
           V   QS FV  R I D +++A+E+VH+
Sbjct: 499 VSDTQSAFVSERLITDNILVAHELVHS 525



 Score = 44.7 bits (104), Expect(3) = 6e-16
 Identities = 21/67 (31%), Positives = 40/67 (59%)
 Frame = +1

Query: 322 KRKSRV*GLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDGRRARATRFYSRM 501
           K+KSR   LR G+RNS++F++++  N  R  I +L+   G +   E  +   A  ++  +
Sbjct: 303 KQKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQTSEAAKGEVAAAYFGNL 362

Query: 502 FQNSSPN 522
           F++S+P+
Sbjct: 363 FKSSNPS 369



 Score = 33.9 bits (76), Expect(3) = 6e-16
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = +3

Query: 588 KSLIFESPRNKAPGPDGFGMEFFTFFWDIVGKNVCDVV 701
           K  +F      APGPDG    FF  +W  VG  V   V
Sbjct: 400 KEAVFSIKPASAPGPDGMSALFFQHYWSTVGNQVTSEV 437


>ref|NP_001175161.1| Os07g0417700 [Oryza sativa Japonica Group]
           gi|255677700|dbj|BAH93889.1| Os07g0417700 [Oryza sativa
           Japonica Group]
          Length = 1011

 Score = 60.5 bits (145), Expect(3) = 8e-16
 Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
 Frame = +2

Query: 707 YFRHGKMLKDVNATLLCIIPKEENAKRLEEFKPIALCN----FVYKIXXXXXXXXXXXXV 874
           +F  G M   VN T + +IPK E    +++F+PI+LCN    FV K             V
Sbjct: 166 FFLTGVMPSGVNNTAIVLIPKIEQPMEVKDFRPISLCNVLYKFVSKCLVNRLRPILDELV 225

Query: 875 FPHQSTFVKGRKI*DEVILAYEMVHNFHLSKSPKS 979
              QS FV GR I D  ILA+E  H+   +K+P S
Sbjct: 226 SQSQSAFVPGRLITDNAILAFECFHSIQKNKNPNS 260



 Score = 38.9 bits (89), Expect(3) = 8e-16
 Identities = 20/64 (31%), Positives = 34/64 (53%)
 Frame = +1

Query: 325 RKSRV*GLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDGRRARATRFYSRMF 504
           ++SR+  L+EGDRN+RFF+S       +N I+ L  + G +          AT+++  M+
Sbjct: 30  QRSRINWLKEGDRNTRFFHSKAVWRAKKNIIVRLRDSGGTVQNSTTVMEDMATKYFQEMY 89

Query: 505 QNSS 516
              S
Sbjct: 90  TADS 93



 Score = 31.6 bits (70), Expect(3) = 8e-16
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 597 IFESPRNKAPGPDGFGMEFFTFFWDIVGKNVCDVV 701
           +F+    KAPGPDGF   F+   W ++ +++  VV
Sbjct: 129 VFQIGPLKAPGPDGFPARFYERNWGVLKEDIVRVV 163


>gb|ABA94593.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1469

 Score = 59.3 bits (142), Expect(3) = 2e-15
 Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
 Frame = +2

Query: 701  YRYFRHGKMLKDVNATLLCIIPKEENAKRLEEFKPIALCNFVYKI----XXXXXXXXXXX 868
            + +F  G M + +N T + +IPK +   +L++++PI+LCN +YK+               
Sbjct: 885  HNFFIIGVMPEGINDTAIVLIPKIKQPTQLKDYRPISLCNVIYKVVSKCLVNRLRPFLDE 944

Query: 869  XVFPHQSTFVKGRKI*DEVILAYEMVHNFHLSKSP-KSICA 988
             V P+QS FV  R I D  ++A+E  H    +K+P K+ CA
Sbjct: 945  LVSPNQSAFVPERLITDNALVAFECFHFIQKNKNPNKAACA 985



 Score = 39.7 bits (91), Expect(3) = 2e-15
 Identities = 23/82 (28%), Positives = 42/82 (51%)
 Frame = +1

Query: 325 RKSRV*GLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDGRRARATRFYSRMF 504
           ++SR+  L+EGDRN+RFF+S       +N I  L+ + G +          AT ++  ++
Sbjct: 751 QRSRINWLKEGDRNTRFFHSKAVWRAKKNRIQSLKDSAGTVHRSATAMEQLATEYFQEVY 810

Query: 505 QNSSPNVSFQIPFNSKFIEENV 570
            ++ P++   I   S F +  V
Sbjct: 811 -SADPSLDHSIV--SSFFQSKV 829



 Score = 30.8 bits (68), Expect(3) = 2e-15
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +3

Query: 597 IFESPRNKAPGPDGFGMEFFTFFWDIVGKNVCDVV 701
           IF+    KAPGPDGF  +F+   W  +   V   V
Sbjct: 850 IFQIGPLKAPGPDGFSAKFYQRNWGTIKSEVVKAV 884


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 50.1 bits (118), Expect(3) = 2e-15
 Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
 Frame = +2

Query: 740 NATLLCIIPKEENAKRLEEFKPIALCNFVYKI----XXXXXXXXXXXXVFPHQSTFVKGR 907
           N T + +IPK +  +  + F+PI LCN VYKI                + P Q +FV  R
Sbjct: 492 NDTFIVLIPKMDIPQLAKHFRPIGLCNIVYKIVTKVIINRLKPILPSLISPTQCSFVPNR 551

Query: 908 KI*DEVILAYEMVHNFHLSKSPKSICA 988
           +I D VI+  EM H+    +  K   A
Sbjct: 552 QITDNVIIVQEMFHSMRNKQGKKGFMA 578



 Score = 41.2 bits (95), Expect(3) = 2e-15
 Identities = 22/69 (31%), Positives = 37/69 (53%)
 Frame = +1

Query: 325 RKSRV*GLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDGRRARATRFYSRMF 504
           +KSR+  + +GDRN+R+F+ S     +RN I  L+ N GE I +    +A    ++  +F
Sbjct: 344 QKSRMEAICDGDRNTRYFHLSTVIRRSRNRIDMLQNNDGEWISNPMEVKAMVLGYWKHLF 403

Query: 505 QNSSPNVSF 531
              S   +F
Sbjct: 404 SEDSVQSNF 412



 Score = 38.5 bits (88), Expect(3) = 2e-15
 Identities = 17/31 (54%), Positives = 21/31 (67%)
 Frame = +3

Query: 618 KAPGPDGFGMEFFTFFWDIVGKNVCDVVIDI 710
           KAPGPDGF   F+  FWD+V  NV  +V +I
Sbjct: 451 KAPGPDGFQPLFYQRFWDLVKPNVMHLVSEI 481


>gb|EEE52364.1| hypothetical protein OsJ_34428 [Oryza sativa Japonica Group]
          Length = 1102

 Score = 59.3 bits (142), Expect(3) = 2e-15
 Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
 Frame = +2

Query: 701  YRYFRHGKMLKDVNATLLCIIPKEENAKRLEEFKPIALCNFVYKI----XXXXXXXXXXX 868
            + +F  G M + +N T + +IPK +   +L++++PI+LCN +YK+               
Sbjct: 892  HNFFIIGVMPEGINDTAIVLIPKIKQPTQLKDYRPISLCNVIYKVVSKCLVNRLRPFLDE 951

Query: 869  XVFPHQSTFVKGRKI*DEVILAYEMVHNFHLSKSP-KSICA 988
             V P+QS FV  R I D  ++A+E  H    +K+P K+ CA
Sbjct: 952  LVSPNQSAFVPERLITDNALVAFECFHFIQKNKNPNKAACA 992



 Score = 39.7 bits (91), Expect(3) = 2e-15
 Identities = 23/82 (28%), Positives = 42/82 (51%)
 Frame = +1

Query: 325 RKSRV*GLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDGRRARATRFYSRMF 504
           ++SR+  L+EGDRN+RFF+S       +N I  L+ + G +          AT ++  ++
Sbjct: 758 QRSRINWLKEGDRNTRFFHSKAVWRAKKNRIQSLKDSAGTVHRSATAMEQLATEYFQEVY 817

Query: 505 QNSSPNVSFQIPFNSKFIEENV 570
            ++ P++   I   S F +  V
Sbjct: 818 -SADPSLDHSIV--SSFFQSKV 836



 Score = 30.8 bits (68), Expect(3) = 2e-15
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +3

Query: 597 IFESPRNKAPGPDGFGMEFFTFFWDIVGKNVCDVV 701
           IF+    KAPGPDGF  +F+   W  +   V   V
Sbjct: 857 IFQIGPLKAPGPDGFSAKFYQRNWGTIKSEVVKAV 891


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