BLASTX nr result
ID: Akebia22_contig00023566
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia22_contig00023566
(291 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006604225.1| PREDICTED: TATA-box-binding protein-like iso... 146 2e-38
ref|XP_006604227.1| PREDICTED: TATA-box-binding protein-like iso... 146 2e-38
ref|XP_004294942.1| PREDICTED: TATA-box-binding protein-like [Fr... 141 6e-37
ref|XP_006392632.1| hypothetical protein EUTSA_v10011790mg [Eutr... 141 6e-37
ref|XP_006305637.1| hypothetical protein CARUB_v10010337mg [Caps... 141 6e-37
ref|NP_175948.1| TATA-box-binding protein 2 [Arabidopsis thalian... 141 4e-36
ref|XP_002894507.1| hypothetical protein ARALYDRAFT_474610 [Arab... 141 4e-36
ref|NP_187953.1| TATA-box-binding protein 1 [Arabidopsis thalian... 140 8e-36
ref|XP_006407218.1| hypothetical protein EUTSA_v10021552mg [Eutr... 140 8e-36
ref|NP_001030688.1| TATA-box-binding protein 1 [Arabidopsis thal... 140 8e-36
pdb|1VTO|A Chain A, 1.9 A Resolution Refined Structure Of Tbp Re... 140 8e-36
pdb|1VTL|E Chain E, Co-Crystal Structure Of Tbp Recognizing The ... 140 8e-36
ref|XP_006407217.1| hypothetical protein EUTSA_v10021552mg [Eutr... 140 8e-36
ref|XP_006298592.1| hypothetical protein CARUB_v10014676mg [Caps... 139 1e-35
ref|XP_002882826.1| transcription factor IID-1 [Arabidopsis lyra... 136 9e-35
gb|EXB94814.1| TATA-box-binding protein [Morus notabilis] 148 7e-34
ref|NP_001105319.1| TATA-box-binding protein 2 [Zea mays] gi|172... 148 7e-34
ref|NP_001238202.1| TATA-box-binding protein [Glycine max] gi|31... 148 7e-34
sp|P48511.1|TBP_MESCR RecName: Full=TATA-box-binding protein; Al... 148 7e-34
ref|XP_006651580.1| PREDICTED: TATA-binding protein 2-like [Oryz... 148 7e-34
>ref|XP_006604225.1| PREDICTED: TATA-box-binding protein-like isoform X1 [Glycine max]
gi|571556188|ref|XP_006604226.1| PREDICTED:
TATA-box-binding protein-like isoform X2 [Glycine max]
Length = 273
Score = 146 bits (368), Expect(2) = 2e-38
Identities = 73/74 (98%), Positives = 73/74 (98%)
Frame = +3
Query: 3 TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 69 TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 128
Query: 183 RLEGLAYSHGAFSS 224
RLEGLAYSH AFSS
Sbjct: 129 RLEGLAYSHSAFSS 142
Score = 38.9 bits (89), Expect(2) = 2e-38
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 244 YEPELFPGLIYRMKQP 291
YEPELFPGLIYRMKQP
Sbjct: 143 YEPELFPGLIYRMKQP 158
>ref|XP_006604227.1| PREDICTED: TATA-box-binding protein-like isoform X3 [Glycine max]
Length = 200
Score = 146 bits (368), Expect(2) = 2e-38
Identities = 73/74 (98%), Positives = 73/74 (98%)
Frame = +3
Query: 3 TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 69 TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 128
Query: 183 RLEGLAYSHGAFSS 224
RLEGLAYSH AFSS
Sbjct: 129 RLEGLAYSHSAFSS 142
Score = 38.9 bits (89), Expect(2) = 2e-38
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 244 YEPELFPGLIYRMKQP 291
YEPELFPGLIYRMKQP
Sbjct: 143 YEPELFPGLIYRMKQP 158
>ref|XP_004294942.1| PREDICTED: TATA-box-binding protein-like [Fragaria vesca subsp.
vesca]
Length = 207
Score = 141 bits (355), Expect(2) = 6e-37
Identities = 71/74 (95%), Positives = 71/74 (95%)
Frame = +3
Query: 3 TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
TTALIFASGKMVCTGAKSE QSKLAARKYARIIQKLGF AKFKDFKIQNIVGSCDVKFPI
Sbjct: 76 TTALIFASGKMVCTGAKSESQSKLAARKYARIIQKLGFDAKFKDFKIQNIVGSCDVKFPI 135
Query: 183 RLEGLAYSHGAFSS 224
RLEGLAYSH AFSS
Sbjct: 136 RLEGLAYSHNAFSS 149
Score = 38.9 bits (89), Expect(2) = 6e-37
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 244 YEPELFPGLIYRMKQP 291
YEPELFPGLIYRMKQP
Sbjct: 150 YEPELFPGLIYRMKQP 165
>ref|XP_006392632.1| hypothetical protein EUTSA_v10011790mg [Eutrema salsugineum]
gi|567131214|ref|XP_006392633.1| hypothetical protein
EUTSA_v10011790mg [Eutrema salsugineum]
gi|557089210|gb|ESQ29918.1| hypothetical protein
EUTSA_v10011790mg [Eutrema salsugineum]
gi|557089211|gb|ESQ29919.1| hypothetical protein
EUTSA_v10011790mg [Eutrema salsugineum]
Length = 200
Score = 141 bits (355), Expect(2) = 6e-37
Identities = 70/74 (94%), Positives = 71/74 (95%)
Frame = +3
Query: 3 TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
TTALIFASGKMVCTGAKSE SKLAARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 69 TTALIFASGKMVCTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPI 128
Query: 183 RLEGLAYSHGAFSS 224
RLEGLAYSH AFSS
Sbjct: 129 RLEGLAYSHSAFSS 142
Score = 38.9 bits (89), Expect(2) = 6e-37
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 244 YEPELFPGLIYRMKQP 291
YEPELFPGLIYRMKQP
Sbjct: 143 YEPELFPGLIYRMKQP 158
>ref|XP_006305637.1| hypothetical protein CARUB_v10010337mg [Capsella rubella]
gi|482574348|gb|EOA38535.1| hypothetical protein
CARUB_v10010337mg [Capsella rubella]
Length = 200
Score = 141 bits (355), Expect(2) = 6e-37
Identities = 70/74 (94%), Positives = 71/74 (95%)
Frame = +3
Query: 3 TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
TTALIFASGKMVCTGAKSE SKLAARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 69 TTALIFASGKMVCTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPI 128
Query: 183 RLEGLAYSHGAFSS 224
RLEGLAYSH AFSS
Sbjct: 129 RLEGLAYSHSAFSS 142
Score = 38.9 bits (89), Expect(2) = 6e-37
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 244 YEPELFPGLIYRMKQP 291
YEPELFPGLIYRMKQP
Sbjct: 143 YEPELFPGLIYRMKQP 158
>ref|NP_175948.1| TATA-box-binding protein 2 [Arabidopsis thaliana]
gi|30695955|ref|NP_849812.1| TATA-box-binding protein 2
[Arabidopsis thaliana] gi|135627|sp|P28148.1|TBP2_ARATH
RecName: Full=TATA-box-binding protein 2; AltName:
Full=TATA sequence-binding protein 2; Short=TBP-2;
AltName: Full=TATA-binding factor 2; AltName:
Full=TATA-box factor 2; AltName: Full=Transcription
initiation factor TFIID TBP-2 subunit
gi|16546|emb|CAA38742.1| transcription initiation factor
II [Arabidopsis thaliana] gi|4204264|gb|AAD10645.1|
transcription initiation factor II [Arabidopsis
thaliana] gi|30102756|gb|AAP21296.1| At1g55520
[Arabidopsis thaliana] gi|39545930|gb|AAR28028.1| TBP2
[Arabidopsis thaliana] gi|110743161|dbj|BAE99472.1|
transcription initiation factor TFIID-2 [Arabidopsis
thaliana] gi|225898024|dbj|BAH30344.1| hypothetical
protein [Arabidopsis thaliana]
gi|332195136|gb|AEE33257.1| TATA-box-binding protein 2
[Arabidopsis thaliana] gi|332195137|gb|AEE33258.1|
TATA-box-binding protein 2 [Arabidopsis thaliana]
gi|227073|prf||1613452A transcription initiation factor
TFIID-1
Length = 200
Score = 141 bits (355), Expect(2) = 4e-36
Identities = 70/74 (94%), Positives = 71/74 (95%)
Frame = +3
Query: 3 TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
TTALIFASGKMVCTGAKSE SKLAARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 69 TTALIFASGKMVCTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPI 128
Query: 183 RLEGLAYSHGAFSS 224
RLEGLAYSH AFSS
Sbjct: 129 RLEGLAYSHSAFSS 142
Score = 36.2 bits (82), Expect(2) = 4e-36
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 244 YEPELFPGLIYRMKQP 291
YEPELFPGLIYRMK P
Sbjct: 143 YEPELFPGLIYRMKLP 158
>ref|XP_002894507.1| hypothetical protein ARALYDRAFT_474610 [Arabidopsis lyrata subsp.
lyrata] gi|297340349|gb|EFH70766.1| hypothetical protein
ARALYDRAFT_474610 [Arabidopsis lyrata subsp. lyrata]
Length = 200
Score = 141 bits (355), Expect(2) = 4e-36
Identities = 70/74 (94%), Positives = 71/74 (95%)
Frame = +3
Query: 3 TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
TTALIFASGKMVCTGAKSE SKLAARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 69 TTALIFASGKMVCTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPI 128
Query: 183 RLEGLAYSHGAFSS 224
RLEGLAYSH AFSS
Sbjct: 129 RLEGLAYSHSAFSS 142
Score = 36.2 bits (82), Expect(2) = 4e-36
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 244 YEPELFPGLIYRMKQP 291
YEPELFPGLIYRMK P
Sbjct: 143 YEPELFPGLIYRMKLP 158
>ref|NP_187953.1| TATA-box-binding protein 1 [Arabidopsis thaliana]
gi|135626|sp|P28147.1|TBP1_ARATH RecName:
Full=TATA-box-binding protein 1; AltName: Full=TATA
sequence-binding protein 1; Short=TBP-1; AltName:
Full=TATA-binding factor 1; AltName: Full=TATA-box
factor 1; AltName: Full=Transcription initiation factor
TFIID TBP-1 subunit gi|1943466|pdb|1VOK|A Chain A,
Arabidopsis Thaliana Tbp (Dimer) gi|1943467|pdb|1VOK|B
Chain B, Arabidopsis Thaliana Tbp (Dimer)
gi|1943469|pdb|1VOL|B Chain B, Tfiib (Human Core
Domain)TBP (A.THALIANA)TATA ELEMENT Ternary Complex
gi|7245860|pdb|1QN5|A Chain A, Crystal Structure Of The
G(-26) Adenovirus Major Late Promoter Tata Box Variant
Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
2). Tata Element Recognition By The Tata Box-Binding
Protein Has Been Conserved Throughout Evolution.
gi|7245861|pdb|1QN5|B Chain B, Crystal Structure Of The
G(-26) Adenovirus Major Late Promoter Tata Box Variant
Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
2). Tata Element Recognition By The Tata Box-Binding
Protein Has Been Conserved Throughout Evolution.
gi|7245866|pdb|1QN6|A Chain A, Crystal Structure Of The
T(-26) Adenovirus Major Late Promoter Tata Box Variant
Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
2). Tata Element Recognition By The Tata Box-Binding
Protein Has Been Conserved Throughout Evolution.
gi|7245867|pdb|1QN6|B Chain B, Crystal Structure Of The
T(-26) Adenovirus Major Late Promoter Tata Box Variant
Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
2). Tata Element Recognition By The Tata Box-Binding
Protein Has Been Conserved Throughout Evolution.
gi|7245872|pdb|1QN7|A Chain A, Crystal Structure Of The
T(-27) Adenovirus Major Late Promoter Tata Box Variant
Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
2). Tata Element Recognition By The Tata Box-Binding
Protein Has Been Conserved Throughout Evolution.
gi|7245873|pdb|1QN7|B Chain B, Crystal Structure Of The
T(-27) Adenovirus Major Late Promoter Tata Box Variant
Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
2). Tata Element Recognition By The Tata Box-Binding
Protein Has Been Conserved Throughout Evolution.
gi|7245878|pdb|1QN8|A Chain A, Crystal Structure Of The
T(-28) Adenovirus Major Late Promoter Tata Box Variant
Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
2). Tata Element Recognition By The Tata Box-Binding
Protein Has Been Conserved Throughout Evolution.
gi|7245879|pdb|1QN8|B Chain B, Crystal Structure Of The
T(-28) Adenovirus Major Late Promoter Tata Box Variant
Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
2). Tata Element Recognition By The Tata Box-Binding
Protein Has Been Conserved Throughout Evolution.
gi|7245884|pdb|1QN9|A Chain A, Crystal Structure Of The
C(-29) Adenovirus Major Late Promoter Tata Box Variant
Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
2). Tata Element Recognition By The Tata Box-Binding
Protein Has Been Conserved Throughout Evolution.
gi|7245885|pdb|1QN9|B Chain B, Crystal Structure Of The
C(-29) Adenovirus Major Late Promoter Tata Box Variant
Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
2). Tata Element Recognition By The Tata Box-Binding
Protein Has Been Conserved Throughout Evolution.
gi|7245890|pdb|1QNA|A Chain A, Crystal Structure Of The
T(-30) Adenovirus Major Late Promoter Tata Box Variant
Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
2). Tata Element Recognition By The Tata Box-Binding
Protein Has Been Conserved Throughout Evolution.
gi|7245891|pdb|1QNA|B Chain B, Crystal Structure Of The
T(-30) Adenovirus Major Late Promoter Tata Box Variant
Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
2). Tata Element Recognition By The Tata Box-Binding
Protein Has Been Conserved Throughout Evolution.
gi|7245896|pdb|1QNB|A Chain A, Crystal Structure Of The
T(-25) Adenovirus Major Late Promoter Tata Box Variant
Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
2). Tata Element Recognition By The Tata Box-Binding
Protein Has Been Conserved Throughout Evolution.
gi|7245897|pdb|1QNB|B Chain B, Crystal Structure Of The
T(-25) Adenovirus Major Late Promoter Tata Box Variant
Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
2). Tata Element Recognition By The Tata Box-Binding
Protein Has Been Conserved Throughout Evolution.
gi|7245902|pdb|1QNC|A Chain A, Crystal Structure Of The
A(-31) Adenovirus Major Late Promoter Tata Box Variant
Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
2). Tata Element Recognition By The Tata Box-Binding
Protein Has Been Conserved Throughout Evolution.
gi|7245903|pdb|1QNC|B Chain B, Crystal Structure Of The
A(-31) Adenovirus Major Late Promoter Tata Box Variant
Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
2). Tata Element Recognition By The Tata Box-Binding
Protein Has Been Conserved Throughout Evolution.
gi|7245908|pdb|1QNE|A Chain A, Crystal Structure Of The
Adenovirus Major Late Promoter Tata Box Bound To
Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform 2).
gi|7245909|pdb|1QNE|B Chain B, Crystal Structure Of The
Adenovirus Major Late Promoter Tata Box Bound To
Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform 2).
gi|7245938|pdb|1QN3|A Chain A, Crystal Structure Of The
C(-25) Adenovirus Major Late Promoter Tata Box Variant
Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
2). Tata Element Recognition By The Tata Box-Binding
Protein Has Been Conserved Throughout Evolution.
gi|7245939|pdb|1QN3|B Chain B, Crystal Structure Of The
C(-25) Adenovirus Major Late Promoter Tata Box Variant
Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
2). Tata Element Recognition By The Tata Box-Binding
Protein Has Been Conserved Throughout Evolution.
gi|7246010|pdb|1QN4|A Chain A, Crystal Structure Of The
T(-24) Adenovirus Major Late Promoter Tata Box Variant
Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
2). Tata Element Recognition By The Tata Box-Binding
Protein Has Been Conserved Throughout Evolution.
gi|7246011|pdb|1QN4|B Chain B, Crystal Structure Of The
T(-24) Adenovirus Major Late Promoter Tata Box Variant
Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
2). Tata Element Recognition By The Tata Box-Binding
Protein Has Been Conserved Throughout Evolution.
gi|11692888|gb|AAG40047.1|AF324696_1 AT3g13445
[Arabidopsis thaliana]
gi|11935207|gb|AAG42019.1|AF327429_1 putative
transcription initiation factor TFIID-1 [Arabidopsis
thaliana] gi|13194816|gb|AAK15570.1|AF349523_1 putative
TATA sequence-binding transcription initiation factor
protein [Arabidopsis thaliana] gi|16548|emb|CAA38743.1|
transcription initiation factor II [Arabidopsis
thaliana] gi|9280296|dbj|BAB01751.1| transcription
initiation factor TFIID-1 (TATA-box factor 1) (TATA
sequence-binding protein 1) (TBP-1) [Arabidopsis
thaliana] gi|15451056|gb|AAK96799.1| transcription
initiation factor TFIID-1 (TATA-box factor 1) (TATA
sequence-binding protein 1) (TBP-1) [Arabidopsis
thaliana] gi|18377408|gb|AAL66870.1| transcription
initiation factor TFIID-1 [Arabidopsis thaliana]
gi|21537103|gb|AAM61444.1| transcription initiation
factor TFIID-1 (TATA sequence-binding protein 1)
[Arabidopsis thaliana] gi|39545928|gb|AAR28027.1| TBP1
[Arabidopsis thaliana] gi|225898637|dbj|BAH30449.1|
hypothetical protein [Arabidopsis thaliana]
gi|332641834|gb|AEE75355.1| TATA-box-binding protein 1
[Arabidopsis thaliana] gi|227074|prf||1613452B
transcription initiation factor TFIID-2
Length = 200
Score = 140 bits (352), Expect(2) = 8e-36
Identities = 69/74 (93%), Positives = 71/74 (95%)
Frame = +3
Query: 3 TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
TTALIFASGKMVCTGAKSE SK+AARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 69 TTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPI 128
Query: 183 RLEGLAYSHGAFSS 224
RLEGLAYSH AFSS
Sbjct: 129 RLEGLAYSHAAFSS 142
Score = 36.2 bits (82), Expect(2) = 8e-36
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 244 YEPELFPGLIYRMKQP 291
YEPELFPGLIYRMK P
Sbjct: 143 YEPELFPGLIYRMKVP 158
>ref|XP_006407218.1| hypothetical protein EUTSA_v10021552mg [Eutrema salsugineum]
gi|557108364|gb|ESQ48671.1| hypothetical protein
EUTSA_v10021552mg [Eutrema salsugineum]
Length = 200
Score = 140 bits (352), Expect(2) = 8e-36
Identities = 69/74 (93%), Positives = 71/74 (95%)
Frame = +3
Query: 3 TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
TTALIFASGKMVCTGAKSE SK+AARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 69 TTALIFASGKMVCTGAKSEHFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPI 128
Query: 183 RLEGLAYSHGAFSS 224
RLEGLAYSH AFSS
Sbjct: 129 RLEGLAYSHAAFSS 142
Score = 36.2 bits (82), Expect(2) = 8e-36
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 244 YEPELFPGLIYRMKQP 291
YEPELFPGLIYRMK P
Sbjct: 143 YEPELFPGLIYRMKVP 158
>ref|NP_001030688.1| TATA-box-binding protein 1 [Arabidopsis thaliana]
gi|332641835|gb|AEE75356.1| TATA-box-binding protein 1
[Arabidopsis thaliana]
Length = 196
Score = 140 bits (352), Expect(2) = 8e-36
Identities = 69/74 (93%), Positives = 71/74 (95%)
Frame = +3
Query: 3 TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
TTALIFASGKMVCTGAKSE SK+AARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 69 TTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPI 128
Query: 183 RLEGLAYSHGAFSS 224
RLEGLAYSH AFSS
Sbjct: 129 RLEGLAYSHAAFSS 142
Score = 36.2 bits (82), Expect(2) = 8e-36
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 244 YEPELFPGLIYRMKQP 291
YEPELFPGLIYRMK P
Sbjct: 143 YEPELFPGLIYRMKVP 158
>pdb|1VTO|A Chain A, 1.9 A Resolution Refined Structure Of Tbp Recognizing The
Minor Groove Of Tataaaag gi|339961163|pdb|1VTO|B Chain
B, 1.9 A Resolution Refined Structure Of Tbp Recognizing
The Minor Groove Of Tataaaag
Length = 190
Score = 140 bits (352), Expect(2) = 8e-36
Identities = 69/74 (93%), Positives = 71/74 (95%)
Frame = +3
Query: 3 TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
TTALIFASGKMVCTGAKSE SK+AARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 59 TTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPI 118
Query: 183 RLEGLAYSHGAFSS 224
RLEGLAYSH AFSS
Sbjct: 119 RLEGLAYSHAAFSS 132
Score = 36.2 bits (82), Expect(2) = 8e-36
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 244 YEPELFPGLIYRMKQP 291
YEPELFPGLIYRMK P
Sbjct: 133 YEPELFPGLIYRMKVP 148
>pdb|1VTL|E Chain E, Co-Crystal Structure Of Tbp Recognizing The Minor Groove
Of A Tata Element gi|339961158|pdb|1VTL|F Chain F,
Co-Crystal Structure Of Tbp Recognizing The Minor Groove
Of A Tata Element
Length = 186
Score = 140 bits (352), Expect(2) = 8e-36
Identities = 69/74 (93%), Positives = 71/74 (95%)
Frame = +3
Query: 3 TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
TTALIFASGKMVCTGAKSE SK+AARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 57 TTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPI 116
Query: 183 RLEGLAYSHGAFSS 224
RLEGLAYSH AFSS
Sbjct: 117 RLEGLAYSHAAFSS 130
Score = 36.2 bits (82), Expect(2) = 8e-36
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 244 YEPELFPGLIYRMKQP 291
YEPELFPGLIYRMK P
Sbjct: 131 YEPELFPGLIYRMKVP 146
>ref|XP_006407217.1| hypothetical protein EUTSA_v10021552mg [Eutrema salsugineum]
gi|557108363|gb|ESQ48670.1| hypothetical protein
EUTSA_v10021552mg [Eutrema salsugineum]
Length = 178
Score = 140 bits (352), Expect(2) = 8e-36
Identities = 69/74 (93%), Positives = 71/74 (95%)
Frame = +3
Query: 3 TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
TTALIFASGKMVCTGAKSE SK+AARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 69 TTALIFASGKMVCTGAKSEHFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPI 128
Query: 183 RLEGLAYSHGAFSS 224
RLEGLAYSH AFSS
Sbjct: 129 RLEGLAYSHAAFSS 142
Score = 36.2 bits (82), Expect(2) = 8e-36
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 244 YEPELFPGLIYRMKQP 291
YEPELFPGLIYRMK P
Sbjct: 143 YEPELFPGLIYRMKVP 158
>ref|XP_006298592.1| hypothetical protein CARUB_v10014676mg [Capsella rubella]
gi|482567301|gb|EOA31490.1| hypothetical protein
CARUB_v10014676mg [Capsella rubella]
Length = 200
Score = 139 bits (351), Expect(2) = 1e-35
Identities = 69/74 (93%), Positives = 71/74 (95%)
Frame = +3
Query: 3 TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
TTALIFASGKMVCTGAKSE SK+AARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 69 TTALIFASGKMVCTGAKSEYFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPI 128
Query: 183 RLEGLAYSHGAFSS 224
RLEGLAYSH AFSS
Sbjct: 129 RLEGLAYSHAAFSS 142
Score = 36.2 bits (82), Expect(2) = 1e-35
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 244 YEPELFPGLIYRMKQP 291
YEPELFPGLIYRMK P
Sbjct: 143 YEPELFPGLIYRMKVP 158
>ref|XP_002882826.1| transcription factor IID-1 [Arabidopsis lyrata subsp. lyrata]
gi|297328666|gb|EFH59085.1| transcription factor IID-1
[Arabidopsis lyrata subsp. lyrata]
Length = 200
Score = 136 bits (343), Expect(2) = 9e-35
Identities = 68/74 (91%), Positives = 70/74 (94%)
Frame = +3
Query: 3 TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
TTALIFASGKMVCTGAKSE SK+AARKYARI+QKLGF AKFKDFKIQNIVGSCDVKFPI
Sbjct: 69 TTALIFASGKMVCTGAKSEYFSKMAARKYARIVQKLGFSAKFKDFKIQNIVGSCDVKFPI 128
Query: 183 RLEGLAYSHGAFSS 224
RLEGLAYSH AFSS
Sbjct: 129 RLEGLAYSHAAFSS 142
Score = 36.2 bits (82), Expect(2) = 9e-35
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 244 YEPELFPGLIYRMKQP 291
YEPELFPGLIYRMK P
Sbjct: 143 YEPELFPGLIYRMKVP 158
>gb|EXB94814.1| TATA-box-binding protein [Morus notabilis]
Length = 198
Score = 148 bits (374), Expect = 7e-34
Identities = 74/74 (100%), Positives = 74/74 (100%)
Frame = +3
Query: 3 TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 67 TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 126
Query: 183 RLEGLAYSHGAFSS 224
RLEGLAYSHGAFSS
Sbjct: 127 RLEGLAYSHGAFSS 140
>ref|NP_001105319.1| TATA-box-binding protein 2 [Zea mays]
gi|1729908|sp|P50159.1|TBP2_MAIZE RecName:
Full=TATA-box-binding protein 2; AltName: Full=TATA
sequence-binding protein 2; Short=TBP-2; AltName:
Full=TATA-binding factor 2; AltName: Full=TATA-box
factor 2; AltName: Full=Transcription initiation factor
TFIID TBP-2 subunit gi|293906|gb|AAA65942.1|
TATA-binding protein [Zea mays]
gi|195604414|gb|ACG24037.1| TATA-binding protein 2 [Zea
mays] gi|238014342|gb|ACR38206.1| unknown [Zea mays]
gi|413933540|gb|AFW68091.1| TATA-binding protein2 [Zea
mays]
Length = 200
Score = 148 bits (374), Expect = 7e-34
Identities = 74/74 (100%), Positives = 74/74 (100%)
Frame = +3
Query: 3 TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 69 TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 128
Query: 183 RLEGLAYSHGAFSS 224
RLEGLAYSHGAFSS
Sbjct: 129 RLEGLAYSHGAFSS 142
>ref|NP_001238202.1| TATA-box-binding protein [Glycine max]
gi|3122946|sp|Q42808.1|TBP_SOYBN RecName:
Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit gi|1220522|gb|AAA91948.1| TATA-box binding
protein [Glycine max]
Length = 200
Score = 148 bits (374), Expect = 7e-34
Identities = 74/74 (100%), Positives = 74/74 (100%)
Frame = +3
Query: 3 TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 69 TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 128
Query: 183 RLEGLAYSHGAFSS 224
RLEGLAYSHGAFSS
Sbjct: 129 RLEGLAYSHGAFSS 142
>sp|P48511.1|TBP_MESCR RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit gi|841440|gb|AAA80641.1| TATA-binding protein
[Mesembryanthemum crystallinum]
Length = 200
Score = 148 bits (374), Expect = 7e-34
Identities = 74/74 (100%), Positives = 74/74 (100%)
Frame = +3
Query: 3 TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 69 TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 128
Query: 183 RLEGLAYSHGAFSS 224
RLEGLAYSHGAFSS
Sbjct: 129 RLEGLAYSHGAFSS 142
>ref|XP_006651580.1| PREDICTED: TATA-binding protein 2-like [Oryza brachyantha]
Length = 216
Score = 148 bits (374), Expect = 7e-34
Identities = 74/74 (100%), Positives = 74/74 (100%)
Frame = +3
Query: 3 TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 85 TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 144
Query: 183 RLEGLAYSHGAFSS 224
RLEGLAYSHGAFSS
Sbjct: 145 RLEGLAYSHGAFSS 158