BLASTX nr result

ID: Akebia22_contig00023566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00023566
         (291 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006604225.1| PREDICTED: TATA-box-binding protein-like iso...   146   2e-38
ref|XP_006604227.1| PREDICTED: TATA-box-binding protein-like iso...   146   2e-38
ref|XP_004294942.1| PREDICTED: TATA-box-binding protein-like [Fr...   141   6e-37
ref|XP_006392632.1| hypothetical protein EUTSA_v10011790mg [Eutr...   141   6e-37
ref|XP_006305637.1| hypothetical protein CARUB_v10010337mg [Caps...   141   6e-37
ref|NP_175948.1| TATA-box-binding protein 2 [Arabidopsis thalian...   141   4e-36
ref|XP_002894507.1| hypothetical protein ARALYDRAFT_474610 [Arab...   141   4e-36
ref|NP_187953.1| TATA-box-binding protein 1 [Arabidopsis thalian...   140   8e-36
ref|XP_006407218.1| hypothetical protein EUTSA_v10021552mg [Eutr...   140   8e-36
ref|NP_001030688.1| TATA-box-binding protein 1 [Arabidopsis thal...   140   8e-36
pdb|1VTO|A Chain A, 1.9 A Resolution Refined Structure Of Tbp Re...   140   8e-36
pdb|1VTL|E Chain E, Co-Crystal Structure Of Tbp Recognizing The ...   140   8e-36
ref|XP_006407217.1| hypothetical protein EUTSA_v10021552mg [Eutr...   140   8e-36
ref|XP_006298592.1| hypothetical protein CARUB_v10014676mg [Caps...   139   1e-35
ref|XP_002882826.1| transcription factor IID-1 [Arabidopsis lyra...   136   9e-35
gb|EXB94814.1| TATA-box-binding protein [Morus notabilis]             148   7e-34
ref|NP_001105319.1| TATA-box-binding protein 2 [Zea mays] gi|172...   148   7e-34
ref|NP_001238202.1| TATA-box-binding protein [Glycine max] gi|31...   148   7e-34
sp|P48511.1|TBP_MESCR RecName: Full=TATA-box-binding protein; Al...   148   7e-34
ref|XP_006651580.1| PREDICTED: TATA-binding protein 2-like [Oryz...   148   7e-34

>ref|XP_006604225.1| PREDICTED: TATA-box-binding protein-like isoform X1 [Glycine max]
           gi|571556188|ref|XP_006604226.1| PREDICTED:
           TATA-box-binding protein-like isoform X2 [Glycine max]
          Length = 273

 Score =  146 bits (368), Expect(2) = 2e-38
 Identities = 73/74 (98%), Positives = 73/74 (98%)
 Frame = +3

Query: 3   TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
           TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 69  TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 128

Query: 183 RLEGLAYSHGAFSS 224
           RLEGLAYSH AFSS
Sbjct: 129 RLEGLAYSHSAFSS 142



 Score = 38.9 bits (89), Expect(2) = 2e-38
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +1

Query: 244 YEPELFPGLIYRMKQP 291
           YEPELFPGLIYRMKQP
Sbjct: 143 YEPELFPGLIYRMKQP 158


>ref|XP_006604227.1| PREDICTED: TATA-box-binding protein-like isoform X3 [Glycine max]
          Length = 200

 Score =  146 bits (368), Expect(2) = 2e-38
 Identities = 73/74 (98%), Positives = 73/74 (98%)
 Frame = +3

Query: 3   TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
           TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 69  TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 128

Query: 183 RLEGLAYSHGAFSS 224
           RLEGLAYSH AFSS
Sbjct: 129 RLEGLAYSHSAFSS 142



 Score = 38.9 bits (89), Expect(2) = 2e-38
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +1

Query: 244 YEPELFPGLIYRMKQP 291
           YEPELFPGLIYRMKQP
Sbjct: 143 YEPELFPGLIYRMKQP 158


>ref|XP_004294942.1| PREDICTED: TATA-box-binding protein-like [Fragaria vesca subsp.
           vesca]
          Length = 207

 Score =  141 bits (355), Expect(2) = 6e-37
 Identities = 71/74 (95%), Positives = 71/74 (95%)
 Frame = +3

Query: 3   TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
           TTALIFASGKMVCTGAKSE QSKLAARKYARIIQKLGF AKFKDFKIQNIVGSCDVKFPI
Sbjct: 76  TTALIFASGKMVCTGAKSESQSKLAARKYARIIQKLGFDAKFKDFKIQNIVGSCDVKFPI 135

Query: 183 RLEGLAYSHGAFSS 224
           RLEGLAYSH AFSS
Sbjct: 136 RLEGLAYSHNAFSS 149



 Score = 38.9 bits (89), Expect(2) = 6e-37
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +1

Query: 244 YEPELFPGLIYRMKQP 291
           YEPELFPGLIYRMKQP
Sbjct: 150 YEPELFPGLIYRMKQP 165


>ref|XP_006392632.1| hypothetical protein EUTSA_v10011790mg [Eutrema salsugineum]
           gi|567131214|ref|XP_006392633.1| hypothetical protein
           EUTSA_v10011790mg [Eutrema salsugineum]
           gi|557089210|gb|ESQ29918.1| hypothetical protein
           EUTSA_v10011790mg [Eutrema salsugineum]
           gi|557089211|gb|ESQ29919.1| hypothetical protein
           EUTSA_v10011790mg [Eutrema salsugineum]
          Length = 200

 Score =  141 bits (355), Expect(2) = 6e-37
 Identities = 70/74 (94%), Positives = 71/74 (95%)
 Frame = +3

Query: 3   TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
           TTALIFASGKMVCTGAKSE  SKLAARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 69  TTALIFASGKMVCTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPI 128

Query: 183 RLEGLAYSHGAFSS 224
           RLEGLAYSH AFSS
Sbjct: 129 RLEGLAYSHSAFSS 142



 Score = 38.9 bits (89), Expect(2) = 6e-37
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +1

Query: 244 YEPELFPGLIYRMKQP 291
           YEPELFPGLIYRMKQP
Sbjct: 143 YEPELFPGLIYRMKQP 158


>ref|XP_006305637.1| hypothetical protein CARUB_v10010337mg [Capsella rubella]
           gi|482574348|gb|EOA38535.1| hypothetical protein
           CARUB_v10010337mg [Capsella rubella]
          Length = 200

 Score =  141 bits (355), Expect(2) = 6e-37
 Identities = 70/74 (94%), Positives = 71/74 (95%)
 Frame = +3

Query: 3   TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
           TTALIFASGKMVCTGAKSE  SKLAARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 69  TTALIFASGKMVCTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPI 128

Query: 183 RLEGLAYSHGAFSS 224
           RLEGLAYSH AFSS
Sbjct: 129 RLEGLAYSHSAFSS 142



 Score = 38.9 bits (89), Expect(2) = 6e-37
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +1

Query: 244 YEPELFPGLIYRMKQP 291
           YEPELFPGLIYRMKQP
Sbjct: 143 YEPELFPGLIYRMKQP 158


>ref|NP_175948.1| TATA-box-binding protein 2 [Arabidopsis thaliana]
           gi|30695955|ref|NP_849812.1| TATA-box-binding protein 2
           [Arabidopsis thaliana] gi|135627|sp|P28148.1|TBP2_ARATH
           RecName: Full=TATA-box-binding protein 2; AltName:
           Full=TATA sequence-binding protein 2; Short=TBP-2;
           AltName: Full=TATA-binding factor 2; AltName:
           Full=TATA-box factor 2; AltName: Full=Transcription
           initiation factor TFIID TBP-2 subunit
           gi|16546|emb|CAA38742.1| transcription initiation factor
           II [Arabidopsis thaliana] gi|4204264|gb|AAD10645.1|
           transcription initiation factor II [Arabidopsis
           thaliana] gi|30102756|gb|AAP21296.1| At1g55520
           [Arabidopsis thaliana] gi|39545930|gb|AAR28028.1| TBP2
           [Arabidopsis thaliana] gi|110743161|dbj|BAE99472.1|
           transcription initiation factor TFIID-2 [Arabidopsis
           thaliana] gi|225898024|dbj|BAH30344.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332195136|gb|AEE33257.1| TATA-box-binding protein 2
           [Arabidopsis thaliana] gi|332195137|gb|AEE33258.1|
           TATA-box-binding protein 2 [Arabidopsis thaliana]
           gi|227073|prf||1613452A transcription initiation factor
           TFIID-1
          Length = 200

 Score =  141 bits (355), Expect(2) = 4e-36
 Identities = 70/74 (94%), Positives = 71/74 (95%)
 Frame = +3

Query: 3   TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
           TTALIFASGKMVCTGAKSE  SKLAARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 69  TTALIFASGKMVCTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPI 128

Query: 183 RLEGLAYSHGAFSS 224
           RLEGLAYSH AFSS
Sbjct: 129 RLEGLAYSHSAFSS 142



 Score = 36.2 bits (82), Expect(2) = 4e-36
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +1

Query: 244 YEPELFPGLIYRMKQP 291
           YEPELFPGLIYRMK P
Sbjct: 143 YEPELFPGLIYRMKLP 158


>ref|XP_002894507.1| hypothetical protein ARALYDRAFT_474610 [Arabidopsis lyrata subsp.
           lyrata] gi|297340349|gb|EFH70766.1| hypothetical protein
           ARALYDRAFT_474610 [Arabidopsis lyrata subsp. lyrata]
          Length = 200

 Score =  141 bits (355), Expect(2) = 4e-36
 Identities = 70/74 (94%), Positives = 71/74 (95%)
 Frame = +3

Query: 3   TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
           TTALIFASGKMVCTGAKSE  SKLAARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 69  TTALIFASGKMVCTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPI 128

Query: 183 RLEGLAYSHGAFSS 224
           RLEGLAYSH AFSS
Sbjct: 129 RLEGLAYSHSAFSS 142



 Score = 36.2 bits (82), Expect(2) = 4e-36
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +1

Query: 244 YEPELFPGLIYRMKQP 291
           YEPELFPGLIYRMK P
Sbjct: 143 YEPELFPGLIYRMKLP 158


>ref|NP_187953.1| TATA-box-binding protein 1 [Arabidopsis thaliana]
           gi|135626|sp|P28147.1|TBP1_ARATH RecName:
           Full=TATA-box-binding protein 1; AltName: Full=TATA
           sequence-binding protein 1; Short=TBP-1; AltName:
           Full=TATA-binding factor 1; AltName: Full=TATA-box
           factor 1; AltName: Full=Transcription initiation factor
           TFIID TBP-1 subunit gi|1943466|pdb|1VOK|A Chain A,
           Arabidopsis Thaliana Tbp (Dimer) gi|1943467|pdb|1VOK|B
           Chain B, Arabidopsis Thaliana Tbp (Dimer)
           gi|1943469|pdb|1VOL|B Chain B, Tfiib (Human Core
           Domain)TBP (A.THALIANA)TATA ELEMENT Ternary Complex
           gi|7245860|pdb|1QN5|A Chain A, Crystal Structure Of The
           G(-26) Adenovirus Major Late Promoter Tata Box Variant
           Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
           2). Tata Element Recognition By The Tata Box-Binding
           Protein Has Been Conserved Throughout Evolution.
           gi|7245861|pdb|1QN5|B Chain B, Crystal Structure Of The
           G(-26) Adenovirus Major Late Promoter Tata Box Variant
           Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
           2). Tata Element Recognition By The Tata Box-Binding
           Protein Has Been Conserved Throughout Evolution.
           gi|7245866|pdb|1QN6|A Chain A, Crystal Structure Of The
           T(-26) Adenovirus Major Late Promoter Tata Box Variant
           Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
           2). Tata Element Recognition By The Tata Box-Binding
           Protein Has Been Conserved Throughout Evolution.
           gi|7245867|pdb|1QN6|B Chain B, Crystal Structure Of The
           T(-26) Adenovirus Major Late Promoter Tata Box Variant
           Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
           2). Tata Element Recognition By The Tata Box-Binding
           Protein Has Been Conserved Throughout Evolution.
           gi|7245872|pdb|1QN7|A Chain A, Crystal Structure Of The
           T(-27) Adenovirus Major Late Promoter Tata Box Variant
           Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
           2). Tata Element Recognition By The Tata Box-Binding
           Protein Has Been Conserved Throughout Evolution.
           gi|7245873|pdb|1QN7|B Chain B, Crystal Structure Of The
           T(-27) Adenovirus Major Late Promoter Tata Box Variant
           Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
           2). Tata Element Recognition By The Tata Box-Binding
           Protein Has Been Conserved Throughout Evolution.
           gi|7245878|pdb|1QN8|A Chain A, Crystal Structure Of The
           T(-28) Adenovirus Major Late Promoter Tata Box Variant
           Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
           2). Tata Element Recognition By The Tata Box-Binding
           Protein Has Been Conserved Throughout Evolution.
           gi|7245879|pdb|1QN8|B Chain B, Crystal Structure Of The
           T(-28) Adenovirus Major Late Promoter Tata Box Variant
           Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
           2). Tata Element Recognition By The Tata Box-Binding
           Protein Has Been Conserved Throughout Evolution.
           gi|7245884|pdb|1QN9|A Chain A, Crystal Structure Of The
           C(-29) Adenovirus Major Late Promoter Tata Box Variant
           Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
           2). Tata Element Recognition By The Tata Box-Binding
           Protein Has Been Conserved Throughout Evolution.
           gi|7245885|pdb|1QN9|B Chain B, Crystal Structure Of The
           C(-29) Adenovirus Major Late Promoter Tata Box Variant
           Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
           2). Tata Element Recognition By The Tata Box-Binding
           Protein Has Been Conserved Throughout Evolution.
           gi|7245890|pdb|1QNA|A Chain A, Crystal Structure Of The
           T(-30) Adenovirus Major Late Promoter Tata Box Variant
           Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
           2). Tata Element Recognition By The Tata Box-Binding
           Protein Has Been Conserved Throughout Evolution.
           gi|7245891|pdb|1QNA|B Chain B, Crystal Structure Of The
           T(-30) Adenovirus Major Late Promoter Tata Box Variant
           Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
           2). Tata Element Recognition By The Tata Box-Binding
           Protein Has Been Conserved Throughout Evolution.
           gi|7245896|pdb|1QNB|A Chain A, Crystal Structure Of The
           T(-25) Adenovirus Major Late Promoter Tata Box Variant
           Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
           2). Tata Element Recognition By The Tata Box-Binding
           Protein Has Been Conserved Throughout Evolution.
           gi|7245897|pdb|1QNB|B Chain B, Crystal Structure Of The
           T(-25) Adenovirus Major Late Promoter Tata Box Variant
           Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
           2). Tata Element Recognition By The Tata Box-Binding
           Protein Has Been Conserved Throughout Evolution.
           gi|7245902|pdb|1QNC|A Chain A, Crystal Structure Of The
           A(-31) Adenovirus Major Late Promoter Tata Box Variant
           Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
           2). Tata Element Recognition By The Tata Box-Binding
           Protein Has Been Conserved Throughout Evolution.
           gi|7245903|pdb|1QNC|B Chain B, Crystal Structure Of The
           A(-31) Adenovirus Major Late Promoter Tata Box Variant
           Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
           2). Tata Element Recognition By The Tata Box-Binding
           Protein Has Been Conserved Throughout Evolution.
           gi|7245908|pdb|1QNE|A Chain A, Crystal Structure Of The
           Adenovirus Major Late Promoter Tata Box Bound To
           Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform 2).
           gi|7245909|pdb|1QNE|B Chain B, Crystal Structure Of The
           Adenovirus Major Late Promoter Tata Box Bound To
           Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform 2).
           gi|7245938|pdb|1QN3|A Chain A, Crystal Structure Of The
           C(-25) Adenovirus Major Late Promoter Tata Box Variant
           Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
           2). Tata Element Recognition By The Tata Box-Binding
           Protein Has Been Conserved Throughout Evolution.
           gi|7245939|pdb|1QN3|B Chain B, Crystal Structure Of The
           C(-25) Adenovirus Major Late Promoter Tata Box Variant
           Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
           2). Tata Element Recognition By The Tata Box-Binding
           Protein Has Been Conserved Throughout Evolution.
           gi|7246010|pdb|1QN4|A Chain A, Crystal Structure Of The
           T(-24) Adenovirus Major Late Promoter Tata Box Variant
           Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
           2). Tata Element Recognition By The Tata Box-Binding
           Protein Has Been Conserved Throughout Evolution.
           gi|7246011|pdb|1QN4|B Chain B, Crystal Structure Of The
           T(-24) Adenovirus Major Late Promoter Tata Box Variant
           Bound To Wild-Type Tbp (Arabidopsis Thaliana Tbp Isoform
           2). Tata Element Recognition By The Tata Box-Binding
           Protein Has Been Conserved Throughout Evolution.
           gi|11692888|gb|AAG40047.1|AF324696_1 AT3g13445
           [Arabidopsis thaliana]
           gi|11935207|gb|AAG42019.1|AF327429_1 putative
           transcription initiation factor TFIID-1 [Arabidopsis
           thaliana] gi|13194816|gb|AAK15570.1|AF349523_1 putative
           TATA sequence-binding transcription initiation factor
           protein [Arabidopsis thaliana] gi|16548|emb|CAA38743.1|
           transcription initiation factor II [Arabidopsis
           thaliana] gi|9280296|dbj|BAB01751.1| transcription
           initiation factor TFIID-1 (TATA-box factor 1) (TATA
           sequence-binding protein 1) (TBP-1) [Arabidopsis
           thaliana] gi|15451056|gb|AAK96799.1| transcription
           initiation factor TFIID-1 (TATA-box factor 1) (TATA
           sequence-binding protein 1) (TBP-1) [Arabidopsis
           thaliana] gi|18377408|gb|AAL66870.1| transcription
           initiation factor TFIID-1 [Arabidopsis thaliana]
           gi|21537103|gb|AAM61444.1| transcription initiation
           factor TFIID-1 (TATA sequence-binding protein 1)
           [Arabidopsis thaliana] gi|39545928|gb|AAR28027.1| TBP1
           [Arabidopsis thaliana] gi|225898637|dbj|BAH30449.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332641834|gb|AEE75355.1| TATA-box-binding protein 1
           [Arabidopsis thaliana] gi|227074|prf||1613452B
           transcription initiation factor TFIID-2
          Length = 200

 Score =  140 bits (352), Expect(2) = 8e-36
 Identities = 69/74 (93%), Positives = 71/74 (95%)
 Frame = +3

Query: 3   TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
           TTALIFASGKMVCTGAKSE  SK+AARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 69  TTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPI 128

Query: 183 RLEGLAYSHGAFSS 224
           RLEGLAYSH AFSS
Sbjct: 129 RLEGLAYSHAAFSS 142



 Score = 36.2 bits (82), Expect(2) = 8e-36
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +1

Query: 244 YEPELFPGLIYRMKQP 291
           YEPELFPGLIYRMK P
Sbjct: 143 YEPELFPGLIYRMKVP 158


>ref|XP_006407218.1| hypothetical protein EUTSA_v10021552mg [Eutrema salsugineum]
           gi|557108364|gb|ESQ48671.1| hypothetical protein
           EUTSA_v10021552mg [Eutrema salsugineum]
          Length = 200

 Score =  140 bits (352), Expect(2) = 8e-36
 Identities = 69/74 (93%), Positives = 71/74 (95%)
 Frame = +3

Query: 3   TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
           TTALIFASGKMVCTGAKSE  SK+AARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 69  TTALIFASGKMVCTGAKSEHFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPI 128

Query: 183 RLEGLAYSHGAFSS 224
           RLEGLAYSH AFSS
Sbjct: 129 RLEGLAYSHAAFSS 142



 Score = 36.2 bits (82), Expect(2) = 8e-36
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +1

Query: 244 YEPELFPGLIYRMKQP 291
           YEPELFPGLIYRMK P
Sbjct: 143 YEPELFPGLIYRMKVP 158


>ref|NP_001030688.1| TATA-box-binding protein 1 [Arabidopsis thaliana]
           gi|332641835|gb|AEE75356.1| TATA-box-binding protein 1
           [Arabidopsis thaliana]
          Length = 196

 Score =  140 bits (352), Expect(2) = 8e-36
 Identities = 69/74 (93%), Positives = 71/74 (95%)
 Frame = +3

Query: 3   TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
           TTALIFASGKMVCTGAKSE  SK+AARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 69  TTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPI 128

Query: 183 RLEGLAYSHGAFSS 224
           RLEGLAYSH AFSS
Sbjct: 129 RLEGLAYSHAAFSS 142



 Score = 36.2 bits (82), Expect(2) = 8e-36
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +1

Query: 244 YEPELFPGLIYRMKQP 291
           YEPELFPGLIYRMK P
Sbjct: 143 YEPELFPGLIYRMKVP 158


>pdb|1VTO|A Chain A, 1.9 A Resolution Refined Structure Of Tbp Recognizing The
           Minor Groove Of Tataaaag gi|339961163|pdb|1VTO|B Chain
           B, 1.9 A Resolution Refined Structure Of Tbp Recognizing
           The Minor Groove Of Tataaaag
          Length = 190

 Score =  140 bits (352), Expect(2) = 8e-36
 Identities = 69/74 (93%), Positives = 71/74 (95%)
 Frame = +3

Query: 3   TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
           TTALIFASGKMVCTGAKSE  SK+AARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 59  TTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPI 118

Query: 183 RLEGLAYSHGAFSS 224
           RLEGLAYSH AFSS
Sbjct: 119 RLEGLAYSHAAFSS 132



 Score = 36.2 bits (82), Expect(2) = 8e-36
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +1

Query: 244 YEPELFPGLIYRMKQP 291
           YEPELFPGLIYRMK P
Sbjct: 133 YEPELFPGLIYRMKVP 148


>pdb|1VTL|E Chain E, Co-Crystal Structure Of Tbp Recognizing The Minor Groove
           Of A Tata Element gi|339961158|pdb|1VTL|F Chain F,
           Co-Crystal Structure Of Tbp Recognizing The Minor Groove
           Of A Tata Element
          Length = 186

 Score =  140 bits (352), Expect(2) = 8e-36
 Identities = 69/74 (93%), Positives = 71/74 (95%)
 Frame = +3

Query: 3   TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
           TTALIFASGKMVCTGAKSE  SK+AARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 57  TTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPI 116

Query: 183 RLEGLAYSHGAFSS 224
           RLEGLAYSH AFSS
Sbjct: 117 RLEGLAYSHAAFSS 130



 Score = 36.2 bits (82), Expect(2) = 8e-36
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +1

Query: 244 YEPELFPGLIYRMKQP 291
           YEPELFPGLIYRMK P
Sbjct: 131 YEPELFPGLIYRMKVP 146


>ref|XP_006407217.1| hypothetical protein EUTSA_v10021552mg [Eutrema salsugineum]
           gi|557108363|gb|ESQ48670.1| hypothetical protein
           EUTSA_v10021552mg [Eutrema salsugineum]
          Length = 178

 Score =  140 bits (352), Expect(2) = 8e-36
 Identities = 69/74 (93%), Positives = 71/74 (95%)
 Frame = +3

Query: 3   TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
           TTALIFASGKMVCTGAKSE  SK+AARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 69  TTALIFASGKMVCTGAKSEHFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPI 128

Query: 183 RLEGLAYSHGAFSS 224
           RLEGLAYSH AFSS
Sbjct: 129 RLEGLAYSHAAFSS 142



 Score = 36.2 bits (82), Expect(2) = 8e-36
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +1

Query: 244 YEPELFPGLIYRMKQP 291
           YEPELFPGLIYRMK P
Sbjct: 143 YEPELFPGLIYRMKVP 158


>ref|XP_006298592.1| hypothetical protein CARUB_v10014676mg [Capsella rubella]
           gi|482567301|gb|EOA31490.1| hypothetical protein
           CARUB_v10014676mg [Capsella rubella]
          Length = 200

 Score =  139 bits (351), Expect(2) = 1e-35
 Identities = 69/74 (93%), Positives = 71/74 (95%)
 Frame = +3

Query: 3   TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
           TTALIFASGKMVCTGAKSE  SK+AARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 69  TTALIFASGKMVCTGAKSEYFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPI 128

Query: 183 RLEGLAYSHGAFSS 224
           RLEGLAYSH AFSS
Sbjct: 129 RLEGLAYSHAAFSS 142



 Score = 36.2 bits (82), Expect(2) = 1e-35
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +1

Query: 244 YEPELFPGLIYRMKQP 291
           YEPELFPGLIYRMK P
Sbjct: 143 YEPELFPGLIYRMKVP 158


>ref|XP_002882826.1| transcription factor IID-1 [Arabidopsis lyrata subsp. lyrata]
           gi|297328666|gb|EFH59085.1| transcription factor IID-1
           [Arabidopsis lyrata subsp. lyrata]
          Length = 200

 Score =  136 bits (343), Expect(2) = 9e-35
 Identities = 68/74 (91%), Positives = 70/74 (94%)
 Frame = +3

Query: 3   TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
           TTALIFASGKMVCTGAKSE  SK+AARKYARI+QKLGF AKFKDFKIQNIVGSCDVKFPI
Sbjct: 69  TTALIFASGKMVCTGAKSEYFSKMAARKYARIVQKLGFSAKFKDFKIQNIVGSCDVKFPI 128

Query: 183 RLEGLAYSHGAFSS 224
           RLEGLAYSH AFSS
Sbjct: 129 RLEGLAYSHAAFSS 142



 Score = 36.2 bits (82), Expect(2) = 9e-35
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +1

Query: 244 YEPELFPGLIYRMKQP 291
           YEPELFPGLIYRMK P
Sbjct: 143 YEPELFPGLIYRMKVP 158


>gb|EXB94814.1| TATA-box-binding protein [Morus notabilis]
          Length = 198

 Score =  148 bits (374), Expect = 7e-34
 Identities = 74/74 (100%), Positives = 74/74 (100%)
 Frame = +3

Query: 3   TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
           TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 67  TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 126

Query: 183 RLEGLAYSHGAFSS 224
           RLEGLAYSHGAFSS
Sbjct: 127 RLEGLAYSHGAFSS 140


>ref|NP_001105319.1| TATA-box-binding protein 2 [Zea mays]
           gi|1729908|sp|P50159.1|TBP2_MAIZE RecName:
           Full=TATA-box-binding protein 2; AltName: Full=TATA
           sequence-binding protein 2; Short=TBP-2; AltName:
           Full=TATA-binding factor 2; AltName: Full=TATA-box
           factor 2; AltName: Full=Transcription initiation factor
           TFIID TBP-2 subunit gi|293906|gb|AAA65942.1|
           TATA-binding protein [Zea mays]
           gi|195604414|gb|ACG24037.1| TATA-binding protein 2 [Zea
           mays] gi|238014342|gb|ACR38206.1| unknown [Zea mays]
           gi|413933540|gb|AFW68091.1| TATA-binding protein2 [Zea
           mays]
          Length = 200

 Score =  148 bits (374), Expect = 7e-34
 Identities = 74/74 (100%), Positives = 74/74 (100%)
 Frame = +3

Query: 3   TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
           TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 69  TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 128

Query: 183 RLEGLAYSHGAFSS 224
           RLEGLAYSHGAFSS
Sbjct: 129 RLEGLAYSHGAFSS 142


>ref|NP_001238202.1| TATA-box-binding protein [Glycine max]
           gi|3122946|sp|Q42808.1|TBP_SOYBN RecName:
           Full=TATA-box-binding protein; AltName: Full=TATA
           sequence-binding protein; Short=TBP; AltName:
           Full=TATA-binding factor; AltName: Full=TATA-box factor;
           AltName: Full=Transcription initiation factor TFIID TBP
           subunit gi|1220522|gb|AAA91948.1| TATA-box binding
           protein [Glycine max]
          Length = 200

 Score =  148 bits (374), Expect = 7e-34
 Identities = 74/74 (100%), Positives = 74/74 (100%)
 Frame = +3

Query: 3   TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
           TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 69  TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 128

Query: 183 RLEGLAYSHGAFSS 224
           RLEGLAYSHGAFSS
Sbjct: 129 RLEGLAYSHGAFSS 142


>sp|P48511.1|TBP_MESCR RecName: Full=TATA-box-binding protein; AltName: Full=TATA
           sequence-binding protein; Short=TBP; AltName:
           Full=TATA-binding factor; AltName: Full=TATA-box factor;
           AltName: Full=Transcription initiation factor TFIID TBP
           subunit gi|841440|gb|AAA80641.1| TATA-binding protein
           [Mesembryanthemum crystallinum]
          Length = 200

 Score =  148 bits (374), Expect = 7e-34
 Identities = 74/74 (100%), Positives = 74/74 (100%)
 Frame = +3

Query: 3   TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
           TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 69  TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 128

Query: 183 RLEGLAYSHGAFSS 224
           RLEGLAYSHGAFSS
Sbjct: 129 RLEGLAYSHGAFSS 142


>ref|XP_006651580.1| PREDICTED: TATA-binding protein 2-like [Oryza brachyantha]
          Length = 216

 Score =  148 bits (374), Expect = 7e-34
 Identities = 74/74 (100%), Positives = 74/74 (100%)
 Frame = +3

Query: 3   TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 182
           TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI
Sbjct: 85  TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPI 144

Query: 183 RLEGLAYSHGAFSS 224
           RLEGLAYSHGAFSS
Sbjct: 145 RLEGLAYSHGAFSS 158


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