BLASTX nr result

ID: Akebia22_contig00022860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00022860
         (905 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                                46   3e-07
gb|EXB94379.1| E3 ubiquitin-protein ligase UPL6 [Morus notabilis]      41   7e-07
gb|AEJ72569.1| putative reverse transcriptase family member [Mal...    46   1e-06
gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                46   4e-06
gb|AAT40500.1| Putative reverse transcriptase, identical [Solanu...    46   4e-06
ref|WP_009187176.1| hypothetical protein [Cecembia lonarensis] g...    41   9e-06

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 46.2 bits (108), Expect(2) = 3e-07
 Identities = 22/44 (50%), Positives = 31/44 (70%)
 Frame = +2

Query: 398 CYPVK*LHVYRMRVAKMSML*WMSGKQKKEKLRNKYI*GT*GIA 529
           C+ VK  HV++M VA+M ML WM G  +K+K+RN+ I G  G+A
Sbjct: 860 CWAVKHQHVHKMGVAEMRMLRWMCGHTRKDKIRNEDIRGKVGVA 903



 Score = 35.8 bits (81), Expect(2) = 3e-07
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = +1

Query: 538 KTRESCLRWFGYVQRTPITAPMR 606
           K RE+ LRWFG+VQR P  AP+R
Sbjct: 908 KMRENQLRWFGHVQRRPTDAPIR 930


>gb|EXB94379.1| E3 ubiquitin-protein ligase UPL6 [Morus notabilis]
          Length = 1413

 Score = 41.2 bits (95), Expect(2) = 7e-07
 Identities = 18/49 (36%), Positives = 33/49 (67%)
 Frame = +2

Query: 383  VHWS*CYPVK*LHVYRMRVAKMSML*WMSGKQKKEKLRNKYI*GT*GIA 529
            ++ S C+ +K  H+ +M VA+M ML WMSG+ + ++++N+ I    G+A
Sbjct: 968  LYGSKCWAIKRQHISKMSVAEMRMLRWMSGQTRMDRIKNEVIRSKVGVA 1016



 Score = 39.3 bits (90), Expect(2) = 7e-07
 Identities = 16/25 (64%), Positives = 20/25 (80%)
 Frame = +1

Query: 535  EKTRESCLRWFGYVQRTPITAPMRA 609
            +K RE  LRWFG+VQR P+ AP+RA
Sbjct: 1020 DKVREGRLRWFGHVQRRPLEAPVRA 1044


>gb|AEJ72569.1| putative reverse transcriptase family member [Malus domestica]
          Length = 212

 Score = 46.2 bits (108), Expect(2) = 1e-06
 Identities = 22/44 (50%), Positives = 31/44 (70%)
 Frame = +2

Query: 398 CYPVK*LHVYRMRVAKMSML*WMSGKQKKEKLRNKYI*GT*GIA 529
           C+ VK  HV++M VA+M ML WM G  +K+K+RN+ I G  G+A
Sbjct: 86  CWAVKYQHVHKMGVAEMRMLRWMCGHTRKDKIRNEDIRGKVGVA 129



 Score = 33.9 bits (76), Expect(2) = 1e-06
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = +1

Query: 544 RESCLRWFGYVQRTPITAPMR 606
           RE+ LRWFG+VQR P  AP+R
Sbjct: 136 RENRLRWFGHVQRRPTYAPIR 156


>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 46.2 bits (108), Expect(2) = 4e-06
 Identities = 21/44 (47%), Positives = 30/44 (68%)
 Frame = +2

Query: 398 CYPVK*LHVYRMRVAKMSML*WMSGKQKKEKLRNKYI*GT*GIA 529
           C+PVK  HV++M VA+M ML WM G  + +K+RN+ I    G+A
Sbjct: 568 CWPVKNAHVHKMHVAEMRMLRWMCGHTRSDKIRNEVIREKVGVA 611



 Score = 32.0 bits (71), Expect(2) = 4e-06
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +1

Query: 535 EKTRESCLRWFGYVQRTPITAPMR 606
           +K RE+ LRWFG+V+R    AP+R
Sbjct: 615 DKLREARLRWFGHVKRRSADAPVR 638


>gb|AAT40500.1| Putative reverse transcriptase, identical [Solanum demissum]
          Length = 213

 Score = 46.2 bits (108), Expect(2) = 4e-06
 Identities = 21/44 (47%), Positives = 30/44 (68%)
 Frame = +2

Query: 398 CYPVK*LHVYRMRVAKMSML*WMSGKQKKEKLRNKYI*GT*GIA 529
           C+PVK  HV++M VA+M ML WM G  + +K+RN+ I    G+A
Sbjct: 100 CWPVKNAHVHKMHVAEMRMLRWMCGHTRSDKIRNEVIREKVGVA 143



 Score = 32.0 bits (71), Expect(2) = 4e-06
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +1

Query: 535 EKTRESCLRWFGYVQRTPITAPMR 606
           +K RE+ LRWFG+V+R    AP+R
Sbjct: 147 DKLREARLRWFGHVKRRSADAPVR 170


>ref|WP_009187176.1| hypothetical protein [Cecembia lonarensis]
           gi|405551390|gb|EKB47241.1| hypothetical protein
           B879_04163 [Cecembia lonarensis LW9]
          Length = 133

 Score = 41.2 bits (95), Expect(2) = 9e-06
 Identities = 21/44 (47%), Positives = 30/44 (68%)
 Frame = +2

Query: 398 CYPVK*LHVYRMRVAKMSML*WMSGKQKKEKLRNKYI*GT*GIA 529
           C+ VK  HV++M VA+M ML  M G  +K+K+RN+ I G  G+A
Sbjct: 7   CWAVKHQHVHKMGVAEMRMLRGMCGHTRKDKIRNEDIQGKVGVA 50



 Score = 35.8 bits (81), Expect(2) = 9e-06
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = +1

Query: 538 KTRESCLRWFGYVQRTPITAPMR 606
           K RE+ LRWFG+VQR P  AP+R
Sbjct: 55  KMRENRLRWFGHVQRRPTDAPVR 77


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