BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00021648
         (605 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   316   3e-84
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa...   310   2e-82
emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]       310   2e-82
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]       310   2e-82
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   309   3e-82
gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tu...   309   5e-82
gb|ABI34311.1| RNA dependent RNA polymerase family protein [Sola...   309   5e-82
ref|XP_006849794.1| hypothetical protein AMTR_s00176p00039530 [A...   308   6e-82
gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]       308   1e-81
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper...   305   5e-81
ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   305   7e-81
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   305   7e-81
ref|NP_001267682.1| RNA-dependent RNA polymerase 1-like [Cucumis...   304   1e-80
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu...   304   1e-80
gb|AAT38699.2| RNA dependent RNA polymerase family protein [Sola...   304   1e-80
gb|ABO92978.1| putative RNA-dependent RNA-polymerase [Solanum tu...   302   6e-80
gb|AAT39936.2| RNA-directed RNA polymerase-like, putative [Solan...   302   6e-80
ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis...   301   7e-80
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th...   301   9e-80
dbj|BAL63010.1| RNA-dependent RNA polymerase 1 [Cucumis sativus]      301   9e-80

>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score =  316 bits (810), Expect = 3e-84
 Identities = 155/201 (77%), Positives = 168/201 (83%)
 Frame = -3

Query: 603  MMLQTFRASKLLELRNKTRIFEPNGRSMMGCLDETRTLEYGQVFVQVSCVGHRQFHVNPF 424
            MMLQTFRASKLLELR KTRIF PNGRSMMGCLDETRTL YGQVFVQ+S  G+RQ H    
Sbjct: 693  MMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESS 752

Query: 423  FIRNENELDQRSLIIMGKVIVAKNPCLHPGDVRVLQAVNVPALQHMVDCVVFPQKGKRPH 244
               +     ++  I+ G V+VAKNPCLHPGDVRVL+AVNVPAL HMVDCVVFPQKG RPH
Sbjct: 753  LFSSSRS--RQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPH 810

Query: 243  PNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVTIEEVQEYFTNYIVN 64
            PNECSGSDLDGDIYFV WD ELIP +Q  PMDYTPAQS+ LDHDV IE+V+EYFTNYIVN
Sbjct: 811  PNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQIEDVEEYFTNYIVN 870

Query: 63   DSLGIIANAHTAFADKEPLKA 1
            DSLGIIANAHT FAD+EP KA
Sbjct: 871  DSLGIIANAHTVFADREPHKA 891


>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
            gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
            [Nicotiana glutinosa]
          Length = 1117

 Score =  310 bits (795), Expect = 2e-82
 Identities = 150/200 (75%), Positives = 170/200 (85%), Gaps = 2/200 (1%)
 Frame = -3

Query: 603  MMLQTFRASKLLELRNKTRIFEPNGRSMMGCLDETRTLEYGQVFVQVSCVGHRQFHV--N 430
            MMLQTFRASKLL+LR ++RIF PNGR+MMGCLDE+RTLEYGQVFVQ +  G RQF+   +
Sbjct: 678  MMLQTFRASKLLDLRTRSRIFIPNGRTMMGCLDESRTLEYGQVFVQFTGTGRRQFYEESH 737

Query: 429  PFFIRNENELDQRSLIIMGKVIVAKNPCLHPGDVRVLQAVNVPALQHMVDCVVFPQKGKR 250
            PF   N++       I+ G V+VAKNPCLHPGD+RVL+AV+VPAL HMVDCVVFPQKGKR
Sbjct: 738  PF---NDSGSTNCDFILEGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKR 794

Query: 249  PHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVTIEEVQEYFTNYI 70
            PHPNECSGSDLDGDIYFV WDP+L+P RQ +PMDYTPA S  LDHDVTIEEV+EYFTNYI
Sbjct: 795  PHPNECSGSDLDGDIYFVCWDPDLVPPRQFQPMDYTPAPSTQLDHDVTIEEVEEYFTNYI 854

Query: 69   VNDSLGIIANAHTAFADKEP 10
            VNDSLGIIANAH  FAD+EP
Sbjct: 855  VNDSLGIIANAHVVFADREP 874


>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
          Length = 775

 Score =  310 bits (795), Expect = 2e-82
 Identities = 148/198 (74%), Positives = 168/198 (84%)
 Frame = -3

Query: 603 MMLQTFRASKLLELRNKTRIFEPNGRSMMGCLDETRTLEYGQVFVQVSCVGHRQFHVNPF 424
           MMLQTFRASKLL+LR +TRIF P GRSMMGCLDE+RTLEYGQVFVQ +  G RQF+    
Sbjct: 368 MMLQTFRASKLLDLRTRTRIFIPKGRSMMGCLDESRTLEYGQVFVQFTGAGGRQFYEESH 427

Query: 423 FIRNENELDQRSLIIMGKVIVAKNPCLHPGDVRVLQAVNVPALQHMVDCVVFPQKGKRPH 244
              N++     + I+ G V+VAKNPCLHPGD+RVL+AV+VPAL HMVDCVVFPQKGKRPH
Sbjct: 428 HF-NDSGSANYNFILKGNVVVAKNPCLHPGDIRVLKAVDVPALHHMVDCVVFPQKGKRPH 486

Query: 243 PNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVTIEEVQEYFTNYIVN 64
           PNECSGSDLDGDIYFV WDP+LIP RQV+PMDYTPA S+ LDHDVTIEEV+EYFTNY+VN
Sbjct: 487 PNECSGSDLDGDIYFVCWDPDLIPPRQVQPMDYTPAPSIQLDHDVTIEEVEEYFTNYMVN 546

Query: 63  DSLGIIANAHTAFADKEP 10
           D LG+IANAH  FAD+EP
Sbjct: 547 DGLGVIANAHVVFADREP 564


>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
          Length = 1116

 Score =  310 bits (794), Expect = 2e-82
 Identities = 151/200 (75%), Positives = 169/200 (84%), Gaps = 2/200 (1%)
 Frame = -3

Query: 603  MMLQTFRASKLLELRNKTRIFEPNGRSMMGCLDETRTLEYGQVFVQVSCVGHRQF--HVN 430
            MMLQTFRASKLL+LR +TRIF PNGR+MMGCLDE+RTLEYGQVFVQ S  G RQF    +
Sbjct: 677  MMLQTFRASKLLDLRTRTRIFIPNGRTMMGCLDESRTLEYGQVFVQFSGAGRRQFFEESH 736

Query: 429  PFFIRNENELDQRSLIIMGKVIVAKNPCLHPGDVRVLQAVNVPALQHMVDCVVFPQKGKR 250
            PF   N++       I+ G V+VAKNPCLHPGD+RVL+AV+VPAL HMVDCVVFPQKGKR
Sbjct: 737  PF---NDSGSANCDFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKR 793

Query: 249  PHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVTIEEVQEYFTNYI 70
            PHPNECSGSDLDGDIYFV WDP+LIP RQV+ MDYTPA +  LDHDVTIEEV+EYFTNYI
Sbjct: 794  PHPNECSGSDLDGDIYFVCWDPDLIPPRQVQSMDYTPAPTTQLDHDVTIEEVEEYFTNYI 853

Query: 69   VNDSLGIIANAHTAFADKEP 10
            +NDSLGIIANAH  FAD+EP
Sbjct: 854  INDSLGIIANAHVVFADREP 873


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  309 bits (792), Expect = 3e-82
 Identities = 152/201 (75%), Positives = 166/201 (82%)
 Frame = -3

Query: 603  MMLQTFRASKLLELRNKTRIFEPNGRSMMGCLDETRTLEYGQVFVQVSCVGHRQFHVNPF 424
            MMLQTFRA+KLLELR KTRIF PNGRSMMGCLDETRTLEYG+VFVQ+S  G RQ   +  
Sbjct: 678  MMLQTFRAAKLLELRTKTRIFVPNGRSMMGCLDETRTLEYGEVFVQISGTGGRQSFGDSL 737

Query: 423  FIRNENELDQRSLIIMGKVIVAKNPCLHPGDVRVLQAVNVPALQHMVDCVVFPQKGKRPH 244
              R        + I+ GK++VAKNPCLHPGDVRVL AVNVP L HMVDCVVFPQKGKRPH
Sbjct: 738  MFRGSGS-HHDNFILEGKIVVAKNPCLHPGDVRVLWAVNVPTLHHMVDCVVFPQKGKRPH 796

Query: 243  PNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVTIEEVQEYFTNYIVN 64
            PNECSGSDLDGDIYFV WD +LIP +Q+ PMDYTPA + +LDHDV IEEV+EYFTNYIVN
Sbjct: 797  PNECSGSDLDGDIYFVCWDRDLIPPQQINPMDYTPAPTKVLDHDVMIEEVEEYFTNYIVN 856

Query: 63   DSLGIIANAHTAFADKEPLKA 1
            DSLGIIANAHT FADKE  KA
Sbjct: 857  DSLGIIANAHTVFADKEYDKA 877


>gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1065

 Score =  309 bits (791), Expect = 5e-82
 Identities = 148/200 (74%), Positives = 171/200 (85%), Gaps = 2/200 (1%)
 Frame = -3

Query: 603  MMLQTFRASKLLELRNKTRIFEPNGRSMMGCLDETRTLEYGQVFVQVSCVGHRQFH--VN 430
            MMLQTFRASKLL+LR K+RIF PNGR+MMGCLDE+RTLEYGQVFVQ +  GHR+F   ++
Sbjct: 674  MMLQTFRASKLLDLRTKSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGAGHREFSEDLH 733

Query: 429  PFFIRNENELDQRSLIIMGKVIVAKNPCLHPGDVRVLQAVNVPALQHMVDCVVFPQKGKR 250
            PF   N +     + I+ G V+VAKNPCLHPGD+RVL+AV+VPAL HMVDCVVFPQKGKR
Sbjct: 734  PF---NNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKR 790

Query: 249  PHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVTIEEVQEYFTNYI 70
            PHPNECSGSDLDGDIYFV WD ++IP RQV+PM+Y PA S+ LDHDVTIEEV+EYFTNYI
Sbjct: 791  PHPNECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLDHDVTIEEVEEYFTNYI 850

Query: 69   VNDSLGIIANAHTAFADKEP 10
            VNDSLGII+NAH  FAD+EP
Sbjct: 851  VNDSLGIISNAHVVFADREP 870


>gb|ABI34311.1| RNA dependent RNA polymerase family protein [Solanum demissum]
          Length = 963

 Score =  309 bits (791), Expect = 5e-82
 Identities = 148/200 (74%), Positives = 171/200 (85%), Gaps = 2/200 (1%)
 Frame = -3

Query: 603  MMLQTFRASKLLELRNKTRIFEPNGRSMMGCLDETRTLEYGQVFVQVSCVGHRQFH--VN 430
            MMLQTFRASKLL+LR K+RIF PNGR+MMGCLDE+RTLEYGQVFVQ +  GHR+F   ++
Sbjct: 523  MMLQTFRASKLLDLRTKSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGAGHREFSEDLH 582

Query: 429  PFFIRNENELDQRSLIIMGKVIVAKNPCLHPGDVRVLQAVNVPALQHMVDCVVFPQKGKR 250
            PF   N +     + I+ G V+VAKNPCLHPGD+RVL+AV+VPAL HMVDCVVFPQKGKR
Sbjct: 583  PF---NNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKR 639

Query: 249  PHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVTIEEVQEYFTNYI 70
            PHPNECSGSDLDGDIYFV WD ++IP RQV+PM+Y PA S+ LDHDVTIEEV+EYFTNYI
Sbjct: 640  PHPNECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLDHDVTIEEVEEYFTNYI 699

Query: 69   VNDSLGIIANAHTAFADKEP 10
            VNDSLGII+NAH  FAD+EP
Sbjct: 700  VNDSLGIISNAHVVFADREP 719


>ref|XP_006849794.1| hypothetical protein AMTR_s00176p00039530 [Amborella trichopoda]
            gi|548853371|gb|ERN11375.1| hypothetical protein
            AMTR_s00176p00039530 [Amborella trichopoda]
          Length = 1210

 Score =  308 bits (790), Expect = 6e-82
 Identities = 148/201 (73%), Positives = 168/201 (83%)
 Frame = -3

Query: 603  MMLQTFRASKLLELRNKTRIFEPNGRSMMGCLDETRTLEYGQVFVQVSCVGHRQFHVNPF 424
            MMLQTFR  KL EL+ KTRIF PNGRSMMGCLDET  LEYGQVFVQ S +G+R+ H    
Sbjct: 759  MMLQTFRGLKLSELKTKTRIFIPNGRSMMGCLDETGILEYGQVFVQFSAIGNRRLHEFGL 818

Query: 423  FIRNENELDQRSLIIMGKVIVAKNPCLHPGDVRVLQAVNVPALQHMVDCVVFPQKGKRPH 244
               NE+  DQR  +++GKVIVAKNPCLHPGDVR+L A++VPAL HMV+CVVFPQKGKRPH
Sbjct: 819  SKINESGSDQRVRVVVGKVIVAKNPCLHPGDVRILTAIDVPALHHMVNCVVFPQKGKRPH 878

Query: 243  PNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVTIEEVQEYFTNYIVN 64
            PNECSGSDLDGDIYFVSWDP LIP  Q  PM+Y PA +  LDH+VTIEE++EYFTNY++N
Sbjct: 879  PNECSGSDLDGDIYFVSWDPMLIPCHQGTPMEYEPAPNNDLDHEVTIEEIEEYFTNYMIN 938

Query: 63   DSLGIIANAHTAFADKEPLKA 1
            DSLGIIANAHT FADKEP+KA
Sbjct: 939  DSLGIIANAHTVFADKEPMKA 959


>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
          Length = 1133

 Score =  308 bits (788), Expect = 1e-81
 Identities = 150/201 (74%), Positives = 168/201 (83%)
 Frame = -3

Query: 603  MMLQTFRASKLLELRNKTRIFEPNGRSMMGCLDETRTLEYGQVFVQVSCVGHRQFHVNPF 424
            MMLQ FRASKL ELR KTRI  P+GR+MMGCLDE RTLEYG+VFVQ S + HR F  + F
Sbjct: 690  MMLQAFRASKLQELRTKTRISIPDGRAMMGCLDEMRTLEYGEVFVQFSGITHRPFFEDSF 749

Query: 423  FIRNENELDQRSLIIMGKVIVAKNPCLHPGDVRVLQAVNVPALQHMVDCVVFPQKGKRPH 244
             +        ++ I++G+V+VAKNPCLHPGDVRVL+AVNVPAL HMVDCVVFPQKG RPH
Sbjct: 750  MLGGTGS--GQNYIVVGRVVVAKNPCLHPGDVRVLRAVNVPALHHMVDCVVFPQKGSRPH 807

Query: 243  PNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVTIEEVQEYFTNYIVN 64
            PNECSGSDLDGDIYFV WD ELIP++Q +PMDY+PA +  LDHDV IEEVQEYFTNYIVN
Sbjct: 808  PNECSGSDLDGDIYFVCWDDELIPQKQFEPMDYSPAPTTRLDHDVRIEEVQEYFTNYIVN 867

Query: 63   DSLGIIANAHTAFADKEPLKA 1
            DSLGIIANAHTAFADKEP KA
Sbjct: 868  DSLGIIANAHTAFADKEPSKA 888


>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
            gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
            [Solanum lycopersicum]
          Length = 1114

 Score =  305 bits (782), Expect = 5e-81
 Identities = 147/200 (73%), Positives = 169/200 (84%), Gaps = 2/200 (1%)
 Frame = -3

Query: 603  MMLQTFRASKLLELRNKTRIFEPNGRSMMGCLDETRTLEYGQVFVQVSCVGHRQFH--VN 430
            MMLQTFRASKLL+LR ++RIF PNGR+MMGCLDE+RTLEYGQVFVQ +  GH +F   ++
Sbjct: 675  MMLQTFRASKLLDLRTRSRIFIPNGRTMMGCLDESRTLEYGQVFVQFTGAGHGEFSDDLH 734

Query: 429  PFFIRNENELDQRSLIIMGKVIVAKNPCLHPGDVRVLQAVNVPALQHMVDCVVFPQKGKR 250
            PF   N +     + I+ G V+VAKNPCLHPGD+RVL+AVNV AL HMVDCVVFPQKGKR
Sbjct: 735  PF---NNSRSTNSNFILKGNVVVAKNPCLHPGDIRVLKAVNVRALHHMVDCVVFPQKGKR 791

Query: 249  PHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVTIEEVQEYFTNYI 70
            PHPNECSGSDLDGDIYFV WD ++IP RQV+PM+Y PA S+ LDHDVTIEEV+EYFTNYI
Sbjct: 792  PHPNECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLDHDVTIEEVEEYFTNYI 851

Query: 69   VNDSLGIIANAHTAFADKEP 10
            VNDSLGIIANAH  FAD+EP
Sbjct: 852  VNDSLGIIANAHVVFADREP 871


>ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Solanum
            tuberosum] gi|565401229|ref|XP_006366110.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X2 [Solanum
            tuberosum]
          Length = 1115

 Score =  305 bits (781), Expect = 7e-81
 Identities = 148/200 (74%), Positives = 169/200 (84%), Gaps = 2/200 (1%)
 Frame = -3

Query: 603  MMLQTFRASKLLELRNKTRIFEPNGRSMMGCLDETRTLEYGQVFVQVSCVGHRQFH--VN 430
            MMLQTFRASKLL+LR K+RIF PNGR MMGCLDE+RTLEYGQVFVQ +  GHR+F   ++
Sbjct: 675  MMLQTFRASKLLDLRTKSRIFIPNGRLMMGCLDESRTLEYGQVFVQFTGSGHREFSEDLH 734

Query: 429  PFFIRNENELDQRSLIIMGKVIVAKNPCLHPGDVRVLQAVNVPALQHMVDCVVFPQKGKR 250
            PF   N +     + I+ G V+VAKNPCLHPGD+RVL+AV+VPAL HMVDCVVFPQKGKR
Sbjct: 735  PF---NNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKR 791

Query: 249  PHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVTIEEVQEYFTNYI 70
            PHPNECSGSDLDGDIYFV WD ++IP RQV+ M+Y PA S+ LDHDVTIEEV+EYFTNYI
Sbjct: 792  PHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSIQLDHDVTIEEVEEYFTNYI 851

Query: 69   VNDSLGIIANAHTAFADKEP 10
            VNDSLGIIANAH  FAD+EP
Sbjct: 852  VNDSLGIIANAHVVFADREP 871


>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
          Length = 1115

 Score =  305 bits (781), Expect = 7e-81
 Identities = 147/200 (73%), Positives = 170/200 (85%), Gaps = 2/200 (1%)
 Frame = -3

Query: 603  MMLQTFRASKLLELRNKTRIFEPNGRSMMGCLDETRTLEYGQVFVQVSCVGHRQFH--VN 430
            MMLQTFRASKLL+LR ++RIF PNGR+MMGCLDE+RTLEYGQVFVQ +  GHR+F   ++
Sbjct: 675  MMLQTFRASKLLDLRTRSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGSGHREFSEDLH 734

Query: 429  PFFIRNENELDQRSLIIMGKVIVAKNPCLHPGDVRVLQAVNVPALQHMVDCVVFPQKGKR 250
            PF   N +     + I+ G V+VAKNPCLHPGD+RVL+AV+VPAL HMVDCVVFPQKGKR
Sbjct: 735  PF---NNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKR 791

Query: 249  PHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVTIEEVQEYFTNYI 70
            PHPNECSGSDLDGDIYFV WD ++IP RQV+ M+Y PA S+ LDHDVTIEEV+EYFTNYI
Sbjct: 792  PHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSIQLDHDVTIEEVEEYFTNYI 851

Query: 69   VNDSLGIIANAHTAFADKEP 10
            VNDSLGIIANAH  FAD+EP
Sbjct: 852  VNDSLGIIANAHVVFADREP 871


>ref|NP_001267682.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
            gi|316989901|gb|ADU77016.1| RNA-dependent RNA polymerase
            1b [Cucumis sativus]
          Length = 1115

 Score =  304 bits (778), Expect = 1e-80
 Identities = 147/201 (73%), Positives = 165/201 (82%)
 Frame = -3

Query: 603  MMLQTFRASKLLELRNKTRIFEPNGRSMMGCLDETRTLEYGQVFVQVSCVGHRQFHVNPF 424
            MML TFR SKL+ELR K+RIF PNGR+MMGCLDETR LEYG+VFVQ  C  H+Q H +  
Sbjct: 688  MMLHTFRESKLMELRMKSRIFIPNGRAMMGCLDETRNLEYGEVFVQ--CSAHQQLHDDRV 745

Query: 423  FIRNENELDQRSLIIMGKVIVAKNPCLHPGDVRVLQAVNVPALQHMVDCVVFPQKGKRPH 244
              +       R  I+ G V+VAKNPCLHPGDVRVL AV+VP+L HM+DCVVFPQKG RPH
Sbjct: 746  IFKRIKS--NRHFIVTGTVVVAKNPCLHPGDVRVLTAVDVPSLHHMIDCVVFPQKGSRPH 803

Query: 243  PNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVTIEEVQEYFTNYIVN 64
            PNECSGSDLDGDIYFV WDP+LIP +QV+PMDYTP  S +LDHDVT+EEVQEYF NY+VN
Sbjct: 804  PNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVN 863

Query: 63   DSLGIIANAHTAFADKEPLKA 1
            DSLGIIANAHTAFADKEP KA
Sbjct: 864  DSLGIIANAHTAFADKEPKKA 884


>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1115

 Score =  304 bits (778), Expect = 1e-80
 Identities = 146/200 (73%), Positives = 170/200 (85%), Gaps = 2/200 (1%)
 Frame = -3

Query: 603  MMLQTFRASKLLELRNKTRIFEPNGRSMMGCLDETRTLEYGQVFVQVSCVGHRQFH--VN 430
            MMLQTFRASKLL+LR ++RIF PNGR+MMGCLDE+RTLEYGQVFVQ +  GHR+F   ++
Sbjct: 675  MMLQTFRASKLLDLRTRSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGAGHREFSEDLH 734

Query: 429  PFFIRNENELDQRSLIIMGKVIVAKNPCLHPGDVRVLQAVNVPALQHMVDCVVFPQKGKR 250
            PF   N +     + I+ G V+VAKNPCLHPGD+RVL+AV+VPAL HMVDCVVFPQKGKR
Sbjct: 735  PF---NNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKR 791

Query: 249  PHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVTIEEVQEYFTNYI 70
            PHPNECSGSDLDGDIYFV WD ++IP RQV+ M+Y PA S+ LDH+VTIEEV+EYFTNYI
Sbjct: 792  PHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSIQLDHNVTIEEVEEYFTNYI 851

Query: 69   VNDSLGIIANAHTAFADKEP 10
            VNDSLGIIANAH  FAD+EP
Sbjct: 852  VNDSLGIIANAHVVFADREP 871


>gb|AAT38699.2| RNA dependent RNA polymerase family protein [Solanum demissum]
          Length = 963

 Score =  304 bits (778), Expect = 1e-80
 Identities = 146/200 (73%), Positives = 170/200 (85%), Gaps = 2/200 (1%)
 Frame = -3

Query: 603  MMLQTFRASKLLELRNKTRIFEPNGRSMMGCLDETRTLEYGQVFVQVSCVGHRQFH--VN 430
            MMLQTFRASKLL+LR ++RIF PNGR+MMGCLDE+RTLEYGQVFVQ +  GHR+F   ++
Sbjct: 523  MMLQTFRASKLLDLRTRSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGAGHREFSEDLH 582

Query: 429  PFFIRNENELDQRSLIIMGKVIVAKNPCLHPGDVRVLQAVNVPALQHMVDCVVFPQKGKR 250
            PF   N +     + I+ G V+VAKNPCLHPGD+RVL+AV+VPAL HMVDCVVFPQKGKR
Sbjct: 583  PF---NNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKR 639

Query: 249  PHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVTIEEVQEYFTNYI 70
            PHPNECSGSDLDGDIYFV WD ++IP RQV+ M+Y PA S+ LDH+VTIEEV+EYFTNYI
Sbjct: 640  PHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSIQLDHNVTIEEVEEYFTNYI 699

Query: 69   VNDSLGIIANAHTAFADKEP 10
            VNDSLGIIANAH  FAD+EP
Sbjct: 700  VNDSLGIIANAHVVFADREP 719


>gb|ABO92978.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 935

 Score =  302 bits (773), Expect = 6e-80
 Identities = 145/200 (72%), Positives = 168/200 (84%), Gaps = 2/200 (1%)
 Frame = -3

Query: 603  MMLQTFRASKLLELRNKTRIFEPNGRSMMGCLDETRTLEYGQVFVQVSCVGHRQFH--VN 430
            MMLQTFRASKLL+LR K+RIF PNGR+MMGCLDE+RTLEYGQVFVQ +  GHR+F   ++
Sbjct: 675  MMLQTFRASKLLDLRTKSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGAGHREFSEDLH 734

Query: 429  PFFIRNENELDQRSLIIMGKVIVAKNPCLHPGDVRVLQAVNVPALQHMVDCVVFPQKGKR 250
            PF   N +     + I+ G V+VAKNPCLHPGD+RVL+AV+VPAL HMVDCVVFPQKGKR
Sbjct: 735  PF---NNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKR 791

Query: 249  PHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVTIEEVQEYFTNYI 70
            PHPNECSGSDLDGDIYFV WD ++IP RQV+ M++ P  S+ LDHDVTIEEV+EYFTNYI
Sbjct: 792  PHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEFPPPPSIQLDHDVTIEEVEEYFTNYI 851

Query: 69   VNDSLGIIANAHTAFADKEP 10
            VND LGIIANAH  FAD+EP
Sbjct: 852  VNDGLGIIANAHVVFADREP 871


>gb|AAT39936.2| RNA-directed RNA polymerase-like, putative [Solanum demissum]
          Length = 1137

 Score =  302 bits (773), Expect = 6e-80
 Identities = 145/200 (72%), Positives = 168/200 (84%), Gaps = 2/200 (1%)
 Frame = -3

Query: 603  MMLQTFRASKLLELRNKTRIFEPNGRSMMGCLDETRTLEYGQVFVQVSCVGHRQFH--VN 430
            MMLQTFRASKLL+LR K+RIF PNGR+MMGCLDE+RTLEYGQVFVQ +  GHR+F   ++
Sbjct: 711  MMLQTFRASKLLDLRTKSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGAGHREFSEDLH 770

Query: 429  PFFIRNENELDQRSLIIMGKVIVAKNPCLHPGDVRVLQAVNVPALQHMVDCVVFPQKGKR 250
            PF   N +     + I+ G V+VAKNPCLHPGD+RVL+AV+VPAL HMVDCVVFPQKGKR
Sbjct: 771  PF---NNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKR 827

Query: 249  PHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVTIEEVQEYFTNYI 70
            PHPNECSGSDLDGDIYFV WD ++IP RQV+ M++ P  S+ LDHDVTIEEV+EYFTNYI
Sbjct: 828  PHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEFPPPPSIQLDHDVTIEEVEEYFTNYI 887

Query: 69   VNDSLGIIANAHTAFADKEP 10
            VND LGIIANAH  FAD+EP
Sbjct: 888  VNDGLGIIANAHVVFADREP 907


>ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
            gi|316989899|gb|ADU77015.1| RNA-dependent RNA polymerase
            1a [Cucumis sativus]
          Length = 1130

 Score =  301 bits (772), Expect = 7e-80
 Identities = 151/201 (75%), Positives = 162/201 (80%)
 Frame = -3

Query: 603  MMLQTFRASKLLELRNKTRIFEPNGRSMMGCLDETRTLEYGQVFVQVSCVGHRQFHVNPF 424
            MMLQTFRASKLLELR K+RIF PNGR+MMGCLDETRTLEYGQVFVQ+S   HR    +  
Sbjct: 687  MMLQTFRASKLLELRTKSRIFIPNGRAMMGCLDETRTLEYGQVFVQISSGRHRNLSESFA 746

Query: 423  FIRNENELDQRSLIIMGKVIVAKNPCLHPGDVRVLQAVNVPALQHMVDCVVFPQKGKRPH 244
            F R   E     L+I G V VAKNPCLHPGDVRVL+AVN+P L HMVDCVVFPQKG RPH
Sbjct: 747  FNRIGRE---HHLVIEGNVTVAKNPCLHPGDVRVLKAVNIPGLYHMVDCVVFPQKGSRPH 803

Query: 243  PNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVTIEEVQEYFTNYIVN 64
            PNECSGSDLDGDIYFV WD ELIP RQ+ PMDYTPA    LD DVT E++QEYF NY+VN
Sbjct: 804  PNECSGSDLDGDIYFVCWDTELIPSRQIPPMDYTPAPPNELDRDVTTEDIQEYFVNYMVN 863

Query: 63   DSLGIIANAHTAFADKEPLKA 1
            DSLGIIANAHTAFADKE  KA
Sbjct: 864  DSLGIIANAHTAFADKELFKA 884


>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
            1 isoform 1 [Theobroma cacao] gi|508709488|gb|EOY01385.1|
            RNA-dependent RNA polymerase 1 isoform 1 [Theobroma
            cacao] gi|508709489|gb|EOY01386.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
          Length = 1109

 Score =  301 bits (771), Expect = 9e-80
 Identities = 150/201 (74%), Positives = 164/201 (81%)
 Frame = -3

Query: 603  MMLQTFRASKLLELRNKTRIFEPNGRSMMGCLDETRTLEYGQVFVQVSCVGHRQFHVNPF 424
            MMLQTFRASKLLELR K+RIF  NGRSMMGCLDETRTL+YGQVFVQVS  G R       
Sbjct: 682  MMLQTFRASKLLELRTKSRIFVANGRSMMGCLDETRTLDYGQVFVQVS--GSRS------ 733

Query: 423  FIRNENELDQRSLIIMGKVIVAKNPCLHPGDVRVLQAVNVPALQHMVDCVVFPQKGKRPH 244
                     ++  I+ GKV+VAKNPCLHPGDVRVL AVNVP L HMVDCVVFPQKG RPH
Sbjct: 734  ---------EQRFIVQGKVVVAKNPCLHPGDVRVLTAVNVPDLHHMVDCVVFPQKGSRPH 784

Query: 243  PNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVTIEEVQEYFTNYIVN 64
            PNECSGSDLDGDIYFV WDPELIP +Q+ PMDY+PA +  L+H+VTIEEV+EYFTNYIVN
Sbjct: 785  PNECSGSDLDGDIYFVCWDPELIPSKQIPPMDYSPAPTKPLEHEVTIEEVEEYFTNYIVN 844

Query: 63   DSLGIIANAHTAFADKEPLKA 1
            DSLGIIANAHT FAD+EP KA
Sbjct: 845  DSLGIIANAHTVFADREPRKA 865


>dbj|BAL63010.1| RNA-dependent RNA polymerase 1 [Cucumis sativus]
          Length = 1115

 Score =  301 bits (771), Expect = 9e-80
 Identities = 146/201 (72%), Positives = 164/201 (81%)
 Frame = -3

Query: 603  MMLQTFRASKLLELRNKTRIFEPNGRSMMGCLDETRTLEYGQVFVQVSCVGHRQFHVNPF 424
            MML TFR SKL+ELR K+RIF PNGR+MMGCLDETR LEYG+VF Q  C  H+Q H +  
Sbjct: 688  MMLHTFRESKLMELRMKSRIFIPNGRAMMGCLDETRNLEYGEVFWQ--CSAHQQLHDDRV 745

Query: 423  FIRNENELDQRSLIIMGKVIVAKNPCLHPGDVRVLQAVNVPALQHMVDCVVFPQKGKRPH 244
              +       R  I+ G V+VAKNPCLHPGDVRVL AV+VP+L HM+DCVVFPQKG RPH
Sbjct: 746  IFKRIKS--NRHFIVTGTVVVAKNPCLHPGDVRVLTAVDVPSLHHMIDCVVFPQKGSRPH 803

Query: 243  PNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVTIEEVQEYFTNYIVN 64
            PNECSGSDLDGDIYFV WDP+LIP +QV+PMDYTP  S +LDHDVT+EEVQEYF NY+VN
Sbjct: 804  PNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVN 863

Query: 63   DSLGIIANAHTAFADKEPLKA 1
            DSLGIIANAHTAFADKEP KA
Sbjct: 864  DSLGIIANAHTAFADKEPKKA 884