BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00020438
         (555 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chlor...   326   3e-87
ref|XP_007026021.1| Pseudouridine synthase family protein [Theob...   324   8e-87
ref|XP_006597578.1| PREDICTED: RNA pseudouridine synthase 6, chl...   321   7e-86
ref|XP_003547248.2| PREDICTED: RNA pseudouridine synthase 6, chl...   321   7e-86
ref|XP_006594433.1| PREDICTED: RNA pseudouridine synthase 6, chl...   321   9e-86
ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chl...   321   9e-86
ref|XP_007213527.1| hypothetical protein PRUPE_ppa020640mg [Prun...   316   2e-84
ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [...   315   6e-84
ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citr...   313   2e-83
ref|XP_006449065.1| hypothetical protein CICLE_v10015055mg [Citr...   313   2e-83
ref|XP_006449064.1| hypothetical protein CICLE_v10015055mg [Citr...   313   2e-83
ref|XP_006449063.1| hypothetical protein CICLE_v10015055mg [Citr...   313   2e-83
ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   312   3e-83
ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chlor...   312   3e-83
ref|XP_002867828.1| pseudouridine synthase family protein [Arabi...   312   3e-83
ref|XP_006348096.1| PREDICTED: RNA pseudouridine synthase 6, chl...   311   5e-83
ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chl...   311   5e-83
ref|NP_193908.1| RNA pseudourine synthase 6 [Arabidopsis thalian...   311   5e-83
ref|XP_002304926.2| pseudouridine synthase family protein [Popul...   311   7e-83
ref|XP_006284907.1| hypothetical protein CARUB_v10006203mg [Caps...   311   9e-83

>ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic [Vitis
           vinifera] gi|302144082|emb|CBI23187.3| unnamed protein
           product [Vitis vinifera]
          Length = 472

 Score =  326 bits (835), Expect = 3e-87
 Identities = 153/183 (83%), Positives = 166/183 (90%)
 Frame = -1

Query: 555 IKGKTVREAQKTFRITHVNEFVEAGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLD 376
           IKGKT+REAQKTFRIT VNEFVEAGTYLRVHVHPKR PRCYEIDWKSRIIAV +SYVVLD
Sbjct: 166 IKGKTIREAQKTFRITDVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLD 225

Query: 375 KPAGTSVGGTTDNIEESCATFATRALGLATPLKTTHQIDNCTEGCVVLARTKDYCSIFHG 196
           KPAGTSVGGTTDNIEESCATFATRALGL TPL+TTHQIDNCTEGCVVLARTK+YCS+FHG
Sbjct: 226 KPAGTSVGGTTDNIEESCATFATRALGLTTPLRTTHQIDNCTEGCVVLARTKEYCSVFHG 285

Query: 195 KIRXXXXXXXXXXXXXAPVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVP 16
           KIR             AP+PIGI+THYMRPVN+APRL+S+DF+KGW+LCQLEVLECKEVP
Sbjct: 286 KIREKKVKKLYRALAAAPMPIGIVTHYMRPVNIAPRLISEDFIKGWYLCQLEVLECKEVP 345

Query: 15  WPN 7
           WP+
Sbjct: 346 WPS 348


>ref|XP_007026021.1| Pseudouridine synthase family protein [Theobroma cacao]
           gi|508781387|gb|EOY28643.1| Pseudouridine synthase
           family protein [Theobroma cacao]
          Length = 491

 Score =  324 bits (831), Expect = 8e-87
 Identities = 151/183 (82%), Positives = 166/183 (90%)
 Frame = -1

Query: 555 IKGKTVREAQKTFRITHVNEFVEAGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLD 376
           I+GKTVREAQKTFRITHV++FVEAGTYLRVHVHPKR PRCYEIDWKSRIIAV DSYVVLD
Sbjct: 182 IRGKTVREAQKTFRITHVDQFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTDSYVVLD 241

Query: 375 KPAGTSVGGTTDNIEESCATFATRALGLATPLKTTHQIDNCTEGCVVLARTKDYCSIFHG 196
           KPAGTSVGGTTDNIEESCATFA RALG +TPLKTTHQIDNCTEGCVVLARTK+YCS+FHG
Sbjct: 242 KPAGTSVGGTTDNIEESCATFANRALGFSTPLKTTHQIDNCTEGCVVLARTKEYCSVFHG 301

Query: 195 KIRXXXXXXXXXXXXXAPVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVP 16
           KIR             AP+PIG+ITHYMRP+NMAPRLVS+DF+KGW+LCQLEV+ECK+VP
Sbjct: 302 KIREKKVKKLYLALTAAPLPIGVITHYMRPINMAPRLVSEDFIKGWYLCQLEVMECKKVP 361

Query: 15  WPN 7
           WP+
Sbjct: 362 WPD 364


>ref|XP_006597578.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X2 [Glycine max]
          Length = 390

 Score =  321 bits (823), Expect = 7e-86
 Identities = 148/185 (80%), Positives = 164/185 (88%)
 Frame = -1

Query: 555 IKGKTVREAQKTFRITHVNEFVEAGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLD 376
           IKGKTVREAQKTFR+THV++FVE GTYLRVHVHPKRSPRCYEIDW+SRII VA+SYVVLD
Sbjct: 171 IKGKTVREAQKTFRVTHVDQFVEPGTYLRVHVHPKRSPRCYEIDWRSRIITVAESYVVLD 230

Query: 375 KPAGTSVGGTTDNIEESCATFATRALGLATPLKTTHQIDNCTEGCVVLARTKDYCSIFHG 196
           KPAGTSVGGTTDNIEESCATFATRALG+ TPL TTHQIDNCTEGCVVLARTK+YCS+FHG
Sbjct: 231 KPAGTSVGGTTDNIEESCATFATRALGMTTPLMTTHQIDNCTEGCVVLARTKEYCSVFHG 290

Query: 195 KIRXXXXXXXXXXXXXAPVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVP 16
           KIR              P+P GIITHYMRP++MAPRL+S+DF+KGWHLCQLEVLEC++VP
Sbjct: 291 KIREKKVKKFYLALAAFPLPTGIITHYMRPIDMAPRLISEDFIKGWHLCQLEVLECRKVP 350

Query: 15  WPNAA 1
           WP  A
Sbjct: 351 WPATA 355


>ref|XP_003547248.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X1 [Glycine max]
          Length = 478

 Score =  321 bits (823), Expect = 7e-86
 Identities = 148/185 (80%), Positives = 164/185 (88%)
 Frame = -1

Query: 555 IKGKTVREAQKTFRITHVNEFVEAGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLD 376
           IKGKTVREAQKTFR+THV++FVE GTYLRVHVHPKRSPRCYEIDW+SRII VA+SYVVLD
Sbjct: 171 IKGKTVREAQKTFRVTHVDQFVEPGTYLRVHVHPKRSPRCYEIDWRSRIITVAESYVVLD 230

Query: 375 KPAGTSVGGTTDNIEESCATFATRALGLATPLKTTHQIDNCTEGCVVLARTKDYCSIFHG 196
           KPAGTSVGGTTDNIEESCATFATRALG+ TPL TTHQIDNCTEGCVVLARTK+YCS+FHG
Sbjct: 231 KPAGTSVGGTTDNIEESCATFATRALGMTTPLMTTHQIDNCTEGCVVLARTKEYCSVFHG 290

Query: 195 KIRXXXXXXXXXXXXXAPVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVP 16
           KIR              P+P GIITHYMRP++MAPRL+S+DF+KGWHLCQLEVLEC++VP
Sbjct: 291 KIREKKVKKFYLALAAFPLPTGIITHYMRPIDMAPRLISEDFIKGWHLCQLEVLECRKVP 350

Query: 15  WPNAA 1
           WP  A
Sbjct: 351 WPATA 355


>ref|XP_006594433.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X2 [Glycine max]
          Length = 390

 Score =  321 bits (822), Expect = 9e-86
 Identities = 149/185 (80%), Positives = 164/185 (88%)
 Frame = -1

Query: 555 IKGKTVREAQKTFRITHVNEFVEAGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLD 376
           IKGKTVREAQKTFR+THV++FVE GTYLRVHVHPKR PR YEIDW+SRIIAVA+SYVVLD
Sbjct: 171 IKGKTVREAQKTFRVTHVDQFVEPGTYLRVHVHPKRFPRSYEIDWRSRIIAVAESYVVLD 230

Query: 375 KPAGTSVGGTTDNIEESCATFATRALGLATPLKTTHQIDNCTEGCVVLARTKDYCSIFHG 196
           KPAGTSVGGTTDNIEESCATFATRALG+ TPL TTHQIDNCTEGCVVLARTKDYCSIFHG
Sbjct: 231 KPAGTSVGGTTDNIEESCATFATRALGMTTPLMTTHQIDNCTEGCVVLARTKDYCSIFHG 290

Query: 195 KIRXXXXXXXXXXXXXAPVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVP 16
           KIR             +P+P GIITHYMRP+NMAPRL+S+DF+KGWHLCQLEVLEC+++P
Sbjct: 291 KIREKKVKKLYLALAASPLPTGIITHYMRPINMAPRLISEDFIKGWHLCQLEVLECRKIP 350

Query: 15  WPNAA 1
           WP  A
Sbjct: 351 WPTTA 355


>ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X1 [Glycine max]
          Length = 478

 Score =  321 bits (822), Expect = 9e-86
 Identities = 149/185 (80%), Positives = 164/185 (88%)
 Frame = -1

Query: 555 IKGKTVREAQKTFRITHVNEFVEAGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLD 376
           IKGKTVREAQKTFR+THV++FVE GTYLRVHVHPKR PR YEIDW+SRIIAVA+SYVVLD
Sbjct: 171 IKGKTVREAQKTFRVTHVDQFVEPGTYLRVHVHPKRFPRSYEIDWRSRIIAVAESYVVLD 230

Query: 375 KPAGTSVGGTTDNIEESCATFATRALGLATPLKTTHQIDNCTEGCVVLARTKDYCSIFHG 196
           KPAGTSVGGTTDNIEESCATFATRALG+ TPL TTHQIDNCTEGCVVLARTKDYCSIFHG
Sbjct: 231 KPAGTSVGGTTDNIEESCATFATRALGMTTPLMTTHQIDNCTEGCVVLARTKDYCSIFHG 290

Query: 195 KIRXXXXXXXXXXXXXAPVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVP 16
           KIR             +P+P GIITHYMRP+NMAPRL+S+DF+KGWHLCQLEVLEC+++P
Sbjct: 291 KIREKKVKKLYLALAASPLPTGIITHYMRPINMAPRLISEDFIKGWHLCQLEVLECRKIP 350

Query: 15  WPNAA 1
           WP  A
Sbjct: 351 WPTTA 355


>ref|XP_007213527.1| hypothetical protein PRUPE_ppa020640mg [Prunus persica]
           gi|462409392|gb|EMJ14726.1| hypothetical protein
           PRUPE_ppa020640mg [Prunus persica]
          Length = 477

 Score =  316 bits (810), Expect = 2e-84
 Identities = 147/184 (79%), Positives = 163/184 (88%)
 Frame = -1

Query: 555 IKGKTVREAQKTFRITHVNEFVEAGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLD 376
           IKGKTVREAQKTFRITH +EFVEAGTYLRVHVHPKR PRCY+IDWKSRIIAV++ +VVLD
Sbjct: 169 IKGKTVREAQKTFRITHADEFVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVSEEFVVLD 228

Query: 375 KPAGTSVGGTTDNIEESCATFATRALGLATPLKTTHQIDNCTEGCVVLARTKDYCSIFHG 196
           KPAGT+VGGTTDNIEESCATFATRALGL TPL TTHQIDNCTEGCVVLARTK+YCS+FHG
Sbjct: 229 KPAGTTVGGTTDNIEESCATFATRALGLTTPLNTTHQIDNCTEGCVVLARTKEYCSVFHG 288

Query: 195 KIRXXXXXXXXXXXXXAPVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVP 16
           KIR             APVP GIITHYMRP+N+APRL+S+DF++ W LCQLEV+ECKE+P
Sbjct: 289 KIREKKVKKLYLALAAAPVPTGIITHYMRPINVAPRLISEDFIERWSLCQLEVMECKEIP 348

Query: 15  WPNA 4
           WPNA
Sbjct: 349 WPNA 352


>ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223542360|gb|EEF43902.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 476

 Score =  315 bits (806), Expect = 6e-84
 Identities = 145/185 (78%), Positives = 165/185 (89%)
 Frame = -1

Query: 555 IKGKTVREAQKTFRITHVNEFVEAGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLD 376
           IKGKTVREAQKTFRITHV++++EAGTYLRVHVHPKR PRCY+IDWKSRIIAV D YVVLD
Sbjct: 166 IKGKTVREAQKTFRITHVDQYLEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTDCYVVLD 225

Query: 375 KPAGTSVGGTTDNIEESCATFATRALGLATPLKTTHQIDNCTEGCVVLARTKDYCSIFHG 196
           KPAGTSVGGT DNIEESCATFATRALGL TPLKTTHQIDNCTEGCVVLAR+K+YCS+FHG
Sbjct: 226 KPAGTSVGGTADNIEESCATFATRALGLTTPLKTTHQIDNCTEGCVVLARSKEYCSVFHG 285

Query: 195 KIRXXXXXXXXXXXXXAPVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVP 16
           KIR             +PVP+G+I +YMRPVN+APRL+S++F+ GWHLCQLEVLEC++VP
Sbjct: 286 KIREKKVKKLYLALAASPVPVGVIKNYMRPVNIAPRLLSEEFVNGWHLCQLEVLECRKVP 345

Query: 15  WPNAA 1
           WP+AA
Sbjct: 346 WPDAA 350


>ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
           gi|557551677|gb|ESR62306.1| hypothetical protein
           CICLE_v10015055mg [Citrus clementina]
          Length = 487

 Score =  313 bits (802), Expect = 2e-83
 Identities = 145/184 (78%), Positives = 166/184 (90%)
 Frame = -1

Query: 555 IKGKTVREAQKTFRITHVNEFVEAGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLD 376
           IKGKTVREAQKTFRITHV++ VEAGTYLRVHVHPKR PRCY+IDWKSRIIAV +S+VVLD
Sbjct: 172 IKGKTVREAQKTFRITHVDQIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESHVVLD 231

Query: 375 KPAGTSVGGTTDNIEESCATFATRALGLATPLKTTHQIDNCTEGCVVLARTKDYCSIFHG 196
           KPAGTSVGGTTDNIEESCATFA+RALGL TPL+TTHQIDNCTEGCVVLART++YCSIFH 
Sbjct: 232 KPAGTSVGGTTDNIEESCATFASRALGLTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHR 291

Query: 195 KIRXXXXXXXXXXXXXAPVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVP 16
           KIR             AP+P+GI+THYMRP+N+APRL+S+DF+KGW+LCQLEV+ECK+VP
Sbjct: 292 KIREKKVKKLYLALTAAPLPVGIMTHYMRPINIAPRLISEDFIKGWYLCQLEVMECKKVP 351

Query: 15  WPNA 4
           WP+A
Sbjct: 352 WPDA 355


>ref|XP_006449065.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
           gi|557551676|gb|ESR62305.1| hypothetical protein
           CICLE_v10015055mg [Citrus clementina]
          Length = 334

 Score =  313 bits (802), Expect = 2e-83
 Identities = 145/184 (78%), Positives = 166/184 (90%)
 Frame = -1

Query: 555 IKGKTVREAQKTFRITHVNEFVEAGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLD 376
           IKGKTVREAQKTFRITHV++ VEAGTYLRVHVHPKR PRCY+IDWKSRIIAV +S+VVLD
Sbjct: 19  IKGKTVREAQKTFRITHVDQIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESHVVLD 78

Query: 375 KPAGTSVGGTTDNIEESCATFATRALGLATPLKTTHQIDNCTEGCVVLARTKDYCSIFHG 196
           KPAGTSVGGTTDNIEESCATFA+RALGL TPL+TTHQIDNCTEGCVVLART++YCSIFH 
Sbjct: 79  KPAGTSVGGTTDNIEESCATFASRALGLTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHR 138

Query: 195 KIRXXXXXXXXXXXXXAPVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVP 16
           KIR             AP+P+GI+THYMRP+N+APRL+S+DF+KGW+LCQLEV+ECK+VP
Sbjct: 139 KIREKKVKKLYLALTAAPLPVGIMTHYMRPINIAPRLISEDFIKGWYLCQLEVMECKKVP 198

Query: 15  WPNA 4
           WP+A
Sbjct: 199 WPDA 202


>ref|XP_006449064.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
           gi|557551675|gb|ESR62304.1| hypothetical protein
           CICLE_v10015055mg [Citrus clementina]
          Length = 469

 Score =  313 bits (802), Expect = 2e-83
 Identities = 145/184 (78%), Positives = 166/184 (90%)
 Frame = -1

Query: 555 IKGKTVREAQKTFRITHVNEFVEAGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLD 376
           IKGKTVREAQKTFRITHV++ VEAGTYLRVHVHPKR PRCY+IDWKSRIIAV +S+VVLD
Sbjct: 154 IKGKTVREAQKTFRITHVDQIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESHVVLD 213

Query: 375 KPAGTSVGGTTDNIEESCATFATRALGLATPLKTTHQIDNCTEGCVVLARTKDYCSIFHG 196
           KPAGTSVGGTTDNIEESCATFA+RALGL TPL+TTHQIDNCTEGCVVLART++YCSIFH 
Sbjct: 214 KPAGTSVGGTTDNIEESCATFASRALGLTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHR 273

Query: 195 KIRXXXXXXXXXXXXXAPVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVP 16
           KIR             AP+P+GI+THYMRP+N+APRL+S+DF+KGW+LCQLEV+ECK+VP
Sbjct: 274 KIREKKVKKLYLALTAAPLPVGIMTHYMRPINIAPRLISEDFIKGWYLCQLEVMECKKVP 333

Query: 15  WPNA 4
           WP+A
Sbjct: 334 WPDA 337


>ref|XP_006449063.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
           gi|557551674|gb|ESR62303.1| hypothetical protein
           CICLE_v10015055mg [Citrus clementina]
          Length = 392

 Score =  313 bits (802), Expect = 2e-83
 Identities = 145/184 (78%), Positives = 166/184 (90%)
 Frame = -1

Query: 555 IKGKTVREAQKTFRITHVNEFVEAGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLD 376
           IKGKTVREAQKTFRITHV++ VEAGTYLRVHVHPKR PRCY+IDWKSRIIAV +S+VVLD
Sbjct: 77  IKGKTVREAQKTFRITHVDQIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESHVVLD 136

Query: 375 KPAGTSVGGTTDNIEESCATFATRALGLATPLKTTHQIDNCTEGCVVLARTKDYCSIFHG 196
           KPAGTSVGGTTDNIEESCATFA+RALGL TPL+TTHQIDNCTEGCVVLART++YCSIFH 
Sbjct: 137 KPAGTSVGGTTDNIEESCATFASRALGLTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHR 196

Query: 195 KIRXXXXXXXXXXXXXAPVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVP 16
           KIR             AP+P+GI+THYMRP+N+APRL+S+DF+KGW+LCQLEV+ECK+VP
Sbjct: 197 KIREKKVKKLYLALTAAPLPVGIMTHYMRPINIAPRLISEDFIKGWYLCQLEVMECKKVP 256

Query: 15  WPNA 4
           WP+A
Sbjct: 257 WPDA 260


>ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 6,
           chloroplastic-like [Cucumis sativus]
          Length = 475

 Score =  312 bits (800), Expect = 3e-83
 Identities = 149/184 (80%), Positives = 161/184 (87%)
 Frame = -1

Query: 555 IKGKTVREAQKTFRITHVNEFVEAGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLD 376
           IKGKTVREAQKTFRITHV+EFVE GTYLRVHVHPKR PRCYEIDWKSRIIAV +SYVVLD
Sbjct: 165 IKGKTVREAQKTFRITHVDEFVEVGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLD 224

Query: 375 KPAGTSVGGTTDNIEESCATFATRALGLATPLKTTHQIDNCTEGCVVLARTKDYCSIFHG 196
           KPAGTSVGGTTDNIEESCATFATRALGL +PL TTHQIDNCTEGCV+ ARTK+YCSIFHG
Sbjct: 225 KPAGTSVGGTTDNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVIFARTKEYCSIFHG 284

Query: 195 KIRXXXXXXXXXXXXXAPVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVP 16
           KIR             APVP+GIITHYMRP+N+APRLVSKD + GW +CQLEVLEC+EV 
Sbjct: 285 KIREKKVMKLYLALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWIICQLEVLECREVS 344

Query: 15  WPNA 4
           WP+A
Sbjct: 345 WPDA 348


>ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis
           sativus]
          Length = 475

 Score =  312 bits (800), Expect = 3e-83
 Identities = 149/184 (80%), Positives = 161/184 (87%)
 Frame = -1

Query: 555 IKGKTVREAQKTFRITHVNEFVEAGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLD 376
           IKGKTVREAQKTFRITHV+EFVE GTYLRVHVHPKR PRCYEIDWKSRIIAV +SYVVLD
Sbjct: 165 IKGKTVREAQKTFRITHVDEFVEVGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLD 224

Query: 375 KPAGTSVGGTTDNIEESCATFATRALGLATPLKTTHQIDNCTEGCVVLARTKDYCSIFHG 196
           KPAGTSVGGTTDNIEESCATFATRALGL +PL TTHQIDNCTEGCV+ ARTK+YCSIFHG
Sbjct: 225 KPAGTSVGGTTDNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVIFARTKEYCSIFHG 284

Query: 195 KIRXXXXXXXXXXXXXAPVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVP 16
           KIR             APVP+GIITHYMRP+N+APRLVSKD + GW +CQLEVLEC+EV 
Sbjct: 285 KIREKKVMKLYLALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWIICQLEVLECREVS 344

Query: 15  WPNA 4
           WP+A
Sbjct: 345 WPDA 348


>ref|XP_002867828.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297313664|gb|EFH44087.1| pseudouridine
           synthase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 476

 Score =  312 bits (800), Expect = 3e-83
 Identities = 145/185 (78%), Positives = 161/185 (87%)
 Frame = -1

Query: 555 IKGKTVREAQKTFRITHVNEFVEAGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLD 376
           IKGKTVREAQKTFR+TH N++ EAGTYLRVHVHPKRSPRCYEIDWKSRI+AV DSYV+LD
Sbjct: 167 IKGKTVREAQKTFRVTHTNQYAEAGTYLRVHVHPKRSPRCYEIDWKSRIVAVTDSYVILD 226

Query: 375 KPAGTSVGGTTDNIEESCATFATRALGLATPLKTTHQIDNCTEGCVVLARTKDYCSIFHG 196
           KPAGT+VGGTTDNIEESCATFA+RAL L  PLKTTHQIDNCTEGCVV ARTK+YCS+FH 
Sbjct: 227 KPAGTTVGGTTDNIEESCATFASRALDLPEPLKTTHQIDNCTEGCVVFARTKEYCSVFHT 286

Query: 195 KIRXXXXXXXXXXXXXAPVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVP 16
           KIR             AP+P GII+HYMRP NMAPRLVS+D +KGWHLCQLEVLECK++P
Sbjct: 287 KIRNKEVKKLYRALAAAPLPTGIISHYMRPKNMAPRLVSEDSIKGWHLCQLEVLECKKIP 346

Query: 15  WPNAA 1
           WP+AA
Sbjct: 347 WPDAA 351


>ref|XP_006348096.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X3 [Solanum tuberosum]
          Length = 440

 Score =  311 bits (798), Expect = 5e-83
 Identities = 147/184 (79%), Positives = 161/184 (87%)
 Frame = -1

Query: 555 IKGKTVREAQKTFRITHVNEFVEAGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLD 376
           IKGKTVREAQKTF+IT  +E VEAGTYLRVHVHPKR PRCY+IDWKSRIIAV D YVVLD
Sbjct: 134 IKGKTVREAQKTFKITRADEIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTDDYVVLD 193

Query: 375 KPAGTSVGGTTDNIEESCATFATRALGLATPLKTTHQIDNCTEGCVVLARTKDYCSIFHG 196
           KPAGTSVGGTTDNIEESCATFATRALG + PL TTHQIDNCTEGCVVLAR+K+YCS+FHG
Sbjct: 194 KPAGTSVGGTTDNIEESCATFATRALGFSAPLLTTHQIDNCTEGCVVLARSKEYCSVFHG 253

Query: 195 KIRXXXXXXXXXXXXXAPVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVP 16
           KIR             APVPIGI+THYMRP+NMAPRLVS+DF+KGW LCQLEVLECK+VP
Sbjct: 254 KIREKKVKKLYLALAAAPVPIGILTHYMRPINMAPRLVSEDFVKGWLLCQLEVLECKKVP 313

Query: 15  WPNA 4
           WP++
Sbjct: 314 WPSS 317


>ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X1 [Solanum tuberosum] gi|565362724|ref|XP_006348095.1|
           PREDICTED: RNA pseudouridine synthase 6,
           chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 483

 Score =  311 bits (798), Expect = 5e-83
 Identities = 147/184 (79%), Positives = 161/184 (87%)
 Frame = -1

Query: 555 IKGKTVREAQKTFRITHVNEFVEAGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLD 376
           IKGKTVREAQKTF+IT  +E VEAGTYLRVHVHPKR PRCY+IDWKSRIIAV D YVVLD
Sbjct: 177 IKGKTVREAQKTFKITRADEIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTDDYVVLD 236

Query: 375 KPAGTSVGGTTDNIEESCATFATRALGLATPLKTTHQIDNCTEGCVVLARTKDYCSIFHG 196
           KPAGTSVGGTTDNIEESCATFATRALG + PL TTHQIDNCTEGCVVLAR+K+YCS+FHG
Sbjct: 237 KPAGTSVGGTTDNIEESCATFATRALGFSAPLLTTHQIDNCTEGCVVLARSKEYCSVFHG 296

Query: 195 KIRXXXXXXXXXXXXXAPVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVP 16
           KIR             APVPIGI+THYMRP+NMAPRLVS+DF+KGW LCQLEVLECK+VP
Sbjct: 297 KIREKKVKKLYLALAAAPVPIGILTHYMRPINMAPRLVSEDFVKGWLLCQLEVLECKKVP 356

Query: 15  WPNA 4
           WP++
Sbjct: 357 WPSS 360


>ref|NP_193908.1| RNA pseudourine synthase 6 [Arabidopsis thaliana]
           gi|75212600|sp|Q9SVS0.1|PUS6_ARATH RecName: Full=RNA
           pseudouridine synthase 6, chloroplastic; AltName:
           Full=RNA pseudouridylate synthase 6; AltName:
           Full=RNA-uridine isomerase 6; Flags: Precursor
           gi|4455285|emb|CAB36821.1| hypothetical protein
           [Arabidopsis thaliana] gi|7268974|emb|CAB81284.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|23296381|gb|AAN13057.1| unknown protein [Arabidopsis
           thaliana] gi|110741616|dbj|BAE98756.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332659101|gb|AEE84501.1| RNA pseudourine synthase 6
           [Arabidopsis thaliana]
          Length = 472

 Score =  311 bits (798), Expect = 5e-83
 Identities = 144/185 (77%), Positives = 162/185 (87%)
 Frame = -1

Query: 555 IKGKTVREAQKTFRITHVNEFVEAGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLD 376
           IKGKTVREAQKTFR+TH N++ EAGTYLRVHVHPKRSPRCYEIDWKSRI+AV DSYV+LD
Sbjct: 163 IKGKTVREAQKTFRVTHTNQYAEAGTYLRVHVHPKRSPRCYEIDWKSRIVAVTDSYVILD 222

Query: 375 KPAGTSVGGTTDNIEESCATFATRALGLATPLKTTHQIDNCTEGCVVLARTKDYCSIFHG 196
           KPAGT+VGGTTDNIEESCATFA+RAL L  PLKTTHQIDNCTEGCVV ARTK+YCS+FH 
Sbjct: 223 KPAGTTVGGTTDNIEESCATFASRALDLPEPLKTTHQIDNCTEGCVVFARTKEYCSVFHT 282

Query: 195 KIRXXXXXXXXXXXXXAPVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVP 16
           KIR             AP+PIGII+HYMRP NMAPRLV++D ++GWHLCQLEVLECK++P
Sbjct: 283 KIRNKEVKKLYRALAAAPLPIGIISHYMRPKNMAPRLVAEDSIQGWHLCQLEVLECKKIP 342

Query: 15  WPNAA 1
           WP+AA
Sbjct: 343 WPDAA 347


>ref|XP_002304926.2| pseudouridine synthase family protein [Populus trichocarpa]
           gi|550340110|gb|EEE85437.2| pseudouridine synthase
           family protein [Populus trichocarpa]
          Length = 470

 Score =  311 bits (797), Expect = 7e-83
 Identities = 143/184 (77%), Positives = 162/184 (88%)
 Frame = -1

Query: 555 IKGKTVREAQKTFRITHVNEFVEAGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLD 376
           IKGKTVREAQKTFRITHV++F+EAG YLRVHVHPKR PRCY+IDWKSRII V +S+VVLD
Sbjct: 160 IKGKTVREAQKTFRITHVDQFLEAGMYLRVHVHPKRFPRCYDIDWKSRIIHVTESFVVLD 219

Query: 375 KPAGTSVGGTTDNIEESCATFATRALGLATPLKTTHQIDNCTEGCVVLARTKDYCSIFHG 196
           KPAGTSVGGTTDNIEESCATFATRALGL  PL+TTHQIDNCTEGCVVLART++ CS+FHG
Sbjct: 220 KPAGTSVGGTTDNIEESCATFATRALGLTAPLRTTHQIDNCTEGCVVLARTREDCSVFHG 279

Query: 195 KIRXXXXXXXXXXXXXAPVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVP 16
           KIR             +PVPIG++ HYMRP+NMAPRLVS++F+KGWHLCQLEV+ECK VP
Sbjct: 280 KIREKTVKKLYIALAASPVPIGVVNHYMRPINMAPRLVSEEFIKGWHLCQLEVMECKRVP 339

Query: 15  WPNA 4
           WP+A
Sbjct: 340 WPDA 343


>ref|XP_006284907.1| hypothetical protein CARUB_v10006203mg [Capsella rubella]
           gi|482553612|gb|EOA17805.1| hypothetical protein
           CARUB_v10006203mg [Capsella rubella]
          Length = 479

 Score =  311 bits (796), Expect = 9e-83
 Identities = 145/184 (78%), Positives = 160/184 (86%)
 Frame = -1

Query: 555 IKGKTVREAQKTFRITHVNEFVEAGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLD 376
           IKGKTVREAQKTFR+TH +++ EAGTYLRVHVHPKRSPRCYEIDWKSRIIAV DSYV+LD
Sbjct: 170 IKGKTVREAQKTFRVTHTDQYAEAGTYLRVHVHPKRSPRCYEIDWKSRIIAVTDSYVILD 229

Query: 375 KPAGTSVGGTTDNIEESCATFATRALGLATPLKTTHQIDNCTEGCVVLARTKDYCSIFHG 196
           KPAGT+VGGTTDNIEESCATFA+RAL L  PLKTTHQIDNCTEGCVV ARTK+YCS+FH 
Sbjct: 230 KPAGTTVGGTTDNIEESCATFASRALDLPEPLKTTHQIDNCTEGCVVFARTKEYCSVFHM 289

Query: 195 KIRXXXXXXXXXXXXXAPVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVP 16
           KIR             AP+P GII+HYMRP NMAPRLVS+D +KGWHLCQLEVLECK++P
Sbjct: 290 KIRDKEVKKLYRALAAAPLPTGIISHYMRPKNMAPRLVSEDSIKGWHLCQLEVLECKKIP 349

Query: 15  WPNA 4
           WPNA
Sbjct: 350 WPNA 353