BLASTX nr result
ID: Akebia22_contig00018509
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia22_contig00018509
(1343 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007015120.1| Cyclin-like family protein [Theobroma cacao]... 551 e-154
ref|XP_006660890.1| PREDICTED: transcription initiation factor I... 549 e-154
ref|NP_001063775.1| Os09g0534800 [Oryza sativa Japonica Group] g... 549 e-154
ref|XP_002513521.1| transcription initiation factor iib, putativ... 549 e-153
ref|XP_004957467.1| PREDICTED: transcription initiation factor I... 548 e-153
dbj|BAK05040.1| predicted protein [Hordeum vulgare subsp. vulgare] 548 e-153
ref|XP_003578512.1| PREDICTED: transcription initiation factor I... 547 e-153
ref|XP_002460572.1| hypothetical protein SORBIDRAFT_02g031020 [S... 547 e-153
ref|NP_001149721.1| transcription initiation factor IIB [Zea may... 546 e-153
gb|ACF81664.1| unknown [Zea mays] gi|414886465|tpg|DAA62479.1| T... 545 e-152
ref|XP_002269045.1| PREDICTED: transcription initiation factor I... 544 e-152
ref|XP_002284342.1| PREDICTED: transcription initiation factor I... 543 e-152
ref|XP_002277679.1| PREDICTED: transcription initiation factor I... 541 e-151
gb|ABR16853.1| unknown [Picea sitchensis] 540 e-151
ref|XP_002322722.1| Transcription initiation factor IIB-1 family... 530 e-148
ref|XP_006421304.1| hypothetical protein CICLE_v10005479mg [Citr... 528 e-147
ref|XP_002534470.1| transcription initiation factor iib, putativ... 528 e-147
ref|XP_007028688.1| Cyclin-like family protein isoform 1 [Theobr... 527 e-147
ref|XP_004304334.1| PREDICTED: transcription initiation factor I... 527 e-147
ref|XP_002882661.1| transcription initiation factor IIB-2 [Arabi... 525 e-146
>ref|XP_007015120.1| Cyclin-like family protein [Theobroma cacao]
gi|508785483|gb|EOY32739.1| Cyclin-like family protein
[Theobroma cacao]
Length = 312
Score = 551 bits (1421), Expect = e-154
Identities = 273/312 (87%), Positives = 291/312 (93%)
Frame = +1
Query: 55 MADTFCPDCKKSTEVVFDHSAGDTVCYECGLVLEAHSIDETSEWRTFANESGDNDPVRVG 234
MAD+FCPDCK+ TEVVFDHSAGD VC ECGLVLEAHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1 MADSFCPDCKRPTEVVFDHSAGDIVCSECGLVLEAHSIDETSEWRTFANESGDNDPVRVG 60
Query: 235 GPTNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIQAFKTITTMSDRLG 414
GP+NPLL DGGLSTVISKPNG+SGDFL+SSLGRWQNRG+NPDRSLIQAFKTI TMSDRLG
Sbjct: 61 GPSNPLLADGGLSTVISKPNGSSGDFLTSSLGRWQNRGANPDRSLIQAFKTIATMSDRLG 120
Query: 415 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 594
LVATIKDRANEIYKKVED K +RGRNQDAILAACLYIACRQED+PRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATK 180
Query: 595 KEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXXXXXXXXXXSEEL 774
KEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGM+N SEEL
Sbjct: 181 KEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMSNQTVKAAQEAVQKSEEL 240
Query: 775 DIRRSPISIAAAVIYMITQLSDEKKLLRDISLATGVAEGTIRNSYKDLYQYASRLIPSSF 954
DIRRSPISIAAAVIY+ITQLSD+KKLL+DISLATGVAEGTIRNSYKDL+ +AS+L+PS +
Sbjct: 241 DIRRSPISIAAAVIYIITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPHASKLVPSWY 300
Query: 955 AKEEDLRNLCSP 990
AKEEDL+NLCSP
Sbjct: 301 AKEEDLKNLCSP 312
>ref|XP_006660890.1| PREDICTED: transcription initiation factor IIB-like [Oryza
brachyantha]
Length = 312
Score = 549 bits (1415), Expect = e-154
Identities = 273/312 (87%), Positives = 288/312 (92%)
Frame = +1
Query: 55 MADTFCPDCKKSTEVVFDHSAGDTVCYECGLVLEAHSIDETSEWRTFANESGDNDPVRVG 234
M+D+FCPDCKK TEV FDHSAGDTVC ECGLVLEAHS+DETSEWRTFANES DNDPVRVG
Sbjct: 1 MSDSFCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESNDNDPVRVG 60
Query: 235 GPTNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIQAFKTITTMSDRLG 414
GPTNPLLTDGGLSTVI+KPNGA G+FLSSSLGRWQNRGSNPDRSLI AF+TI M+DRLG
Sbjct: 61 GPTNPLLTDGGLSTVIAKPNGAQGEFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120
Query: 415 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 594
LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 180
Query: 595 KEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXXXXXXXXXXSEEL 774
KEIGRAKE+IVKQLEVEMGQSMEMGTIHAGDFLRRFCS LGM N SEEL
Sbjct: 181 KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVKAAQEAVQRSEEL 240
Query: 775 DIRRSPISIAAAVIYMITQLSDEKKLLRDISLATGVAEGTIRNSYKDLYQYASRLIPSSF 954
DIRRSPISIAAAVIYMITQLSD+KK L+DISLATGVAEGTIRNSYKDLY YASRLIP+++
Sbjct: 241 DIRRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIPNTY 300
Query: 955 AKEEDLRNLCSP 990
AKEEDL+NLC+P
Sbjct: 301 AKEEDLKNLCTP 312
>ref|NP_001063775.1| Os09g0534800 [Oryza sativa Japonica Group]
gi|21362998|sp|Q8W0W3.1|TF2B_ORYSJ RecName:
Full=Transcription initiation factor IIB; AltName:
Full=General transcription factor TFIIB
gi|18481632|gb|AAL73491.1|AF464908_1 general
transcription factor TFIIB [Oryza sativa]
gi|50725809|dbj|BAD33339.1| Transcription initiation
factor IIB [Oryza sativa Japonica Group]
gi|50726577|dbj|BAD34211.1| Transcription initiation
factor IIB [Oryza sativa Japonica Group]
gi|113632008|dbj|BAF25689.1| Os09g0534800 [Oryza sativa
Japonica Group] gi|125564497|gb|EAZ09877.1| hypothetical
protein OsI_32170 [Oryza sativa Indica Group]
gi|125606444|gb|EAZ45480.1| hypothetical protein
OsJ_30135 [Oryza sativa Japonica Group]
gi|347737122|gb|AEP20532.1| transcription factor [Oryza
sativa Japonica Group]
Length = 312
Score = 549 bits (1415), Expect = e-154
Identities = 273/312 (87%), Positives = 288/312 (92%)
Frame = +1
Query: 55 MADTFCPDCKKSTEVVFDHSAGDTVCYECGLVLEAHSIDETSEWRTFANESGDNDPVRVG 234
M+D+FCPDCKK TEV FDHSAGDTVC ECGLVLEAHS+DETSEWRTFANES DNDPVRVG
Sbjct: 1 MSDSFCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESSDNDPVRVG 60
Query: 235 GPTNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIQAFKTITTMSDRLG 414
GPTNPLLTDGGLSTVI+KPNGA G+FLSSSLGRWQNRGSNPDRSLI AF+TI M+DRLG
Sbjct: 61 GPTNPLLTDGGLSTVIAKPNGAQGEFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120
Query: 415 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 594
LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 180
Query: 595 KEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXXXXXXXXXXSEEL 774
KEIGRAKE+IVKQLEVEMGQSMEMGTIHAGDFLRRFCS LGM N SEEL
Sbjct: 181 KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVKAAQEAVQRSEEL 240
Query: 775 DIRRSPISIAAAVIYMITQLSDEKKLLRDISLATGVAEGTIRNSYKDLYQYASRLIPSSF 954
DIRRSPISIAAAVIYMITQLSD+KK L+DISLATGVAEGTIRNSYKDLY YASRLIP+++
Sbjct: 241 DIRRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIPNTY 300
Query: 955 AKEEDLRNLCSP 990
AKEEDL+NLC+P
Sbjct: 301 AKEEDLKNLCTP 312
>ref|XP_002513521.1| transcription initiation factor iib, putative [Ricinus communis]
gi|223547429|gb|EEF48924.1| transcription initiation
factor iib, putative [Ricinus communis]
Length = 312
Score = 549 bits (1414), Expect = e-153
Identities = 271/312 (86%), Positives = 287/312 (91%)
Frame = +1
Query: 55 MADTFCPDCKKSTEVVFDHSAGDTVCYECGLVLEAHSIDETSEWRTFANESGDNDPVRVG 234
MADT+CPDCK+ TEVVFDHSAGDTVC ECGLVLE+HSIDETSEWRTFANES DNDPVRVG
Sbjct: 1 MADTYCPDCKRPTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESADNDPVRVG 60
Query: 235 GPTNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIQAFKTITTMSDRLG 414
GP+NPLL DGGLSTVISKP GASGDFL+SSLGRWQNRGSNPDRSLIQAFKTI TMSDRLG
Sbjct: 61 GPSNPLLADGGLSTVISKPTGASGDFLTSSLGRWQNRGSNPDRSLIQAFKTIATMSDRLG 120
Query: 415 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 594
LVATIKDRANEIYKKVED K +RGRNQDA+LAACLYIACRQED+PRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDQKPLRGRNQDAVLAACLYIACRQEDKPRTVKEICSVANGATK 180
Query: 595 KEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXXXXXXXXXXSEEL 774
KEIGRAKEYIVKQLEVE+GQSMEMGTIHAGDFLRRFCSHLGM N SEEL
Sbjct: 181 KEIGRAKEYIVKQLEVELGQSMEMGTIHAGDFLRRFCSHLGMNNQAVKAAQEAVKKSEEL 240
Query: 775 DIRRSPISIAAAVIYMITQLSDEKKLLRDISLATGVAEGTIRNSYKDLYQYASRLIPSSF 954
DIRRSPISIAAA+IYMITQLS+EKKLL+DIS +TGVAEGTIRNSYKDLY YASR++PS +
Sbjct: 241 DIRRSPISIAAAIIYMITQLSEEKKLLKDISTSTGVAEGTIRNSYKDLYPYASRIVPSWY 300
Query: 955 AKEEDLRNLCSP 990
AKEEDL NLCSP
Sbjct: 301 AKEEDLINLCSP 312
>ref|XP_004957467.1| PREDICTED: transcription initiation factor IIB-like [Setaria
italica]
Length = 312
Score = 548 bits (1412), Expect = e-153
Identities = 272/312 (87%), Positives = 288/312 (92%)
Frame = +1
Query: 55 MADTFCPDCKKSTEVVFDHSAGDTVCYECGLVLEAHSIDETSEWRTFANESGDNDPVRVG 234
M+D+FCPDCKK TEV FDHSAGDTVC ECGLVLEAHS+DETSEWRTFANES DNDPVRVG
Sbjct: 1 MSDSFCPDCKKQTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESNDNDPVRVG 60
Query: 235 GPTNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIQAFKTITTMSDRLG 414
GPTNPLLTDGGLSTVI+KPNGA G+FLSSSLGRWQNRGSNPDRSLI AF+TI M+DRLG
Sbjct: 61 GPTNPLLTDGGLSTVIAKPNGAQGEFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120
Query: 415 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 594
LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 180
Query: 595 KEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXXXXXXXXXXSEEL 774
KEIGRAKE+IVKQLEVEMGQSMEMGTIHAGDFLRRFCS LGM N SEEL
Sbjct: 181 KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVKAAQEAVQRSEEL 240
Query: 775 DIRRSPISIAAAVIYMITQLSDEKKLLRDISLATGVAEGTIRNSYKDLYQYASRLIPSSF 954
DIRRSPISIAAAVIYMITQLS++KK L+DISLATGVAEGTIRNSYKDLY YASRLIP+++
Sbjct: 241 DIRRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIPNTY 300
Query: 955 AKEEDLRNLCSP 990
AKEEDL+NLC+P
Sbjct: 301 AKEEDLKNLCTP 312
>dbj|BAK05040.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 312
Score = 548 bits (1411), Expect = e-153
Identities = 272/312 (87%), Positives = 288/312 (92%)
Frame = +1
Query: 55 MADTFCPDCKKSTEVVFDHSAGDTVCYECGLVLEAHSIDETSEWRTFANESGDNDPVRVG 234
M+DT+CPDCKK TEV FDHSAGDTVC ECGLVLEAHS+DETSEWRTFANES DNDPVRVG
Sbjct: 1 MSDTYCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESNDNDPVRVG 60
Query: 235 GPTNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIQAFKTITTMSDRLG 414
GP+NPLLTDGGLSTVI+KPNGA GDFLSSSLGRWQNRGSNPDRSLI AF+TI M+DRLG
Sbjct: 61 GPSNPLLTDGGLSTVIAKPNGAHGDFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120
Query: 415 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 594
LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 180
Query: 595 KEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXXXXXXXXXXSEEL 774
KEIGRAKE+IVKQLEVEMGQSMEMGTIHAGDFLRRFCS LGM N SEEL
Sbjct: 181 KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNTAVKAAQEAVQRSEEL 240
Query: 775 DIRRSPISIAAAVIYMITQLSDEKKLLRDISLATGVAEGTIRNSYKDLYQYASRLIPSSF 954
DIRRSPISIAAAVIYMITQLS++KK L+DISLATGVAEGTIRNSYKDLY YA+RLIP+S+
Sbjct: 241 DIRRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPYAARLIPNSY 300
Query: 955 AKEEDLRNLCSP 990
AKEEDL+NLC+P
Sbjct: 301 AKEEDLKNLCTP 312
>ref|XP_003578512.1| PREDICTED: transcription initiation factor IIB-like [Brachypodium
distachyon]
Length = 312
Score = 547 bits (1410), Expect = e-153
Identities = 272/312 (87%), Positives = 288/312 (92%)
Frame = +1
Query: 55 MADTFCPDCKKSTEVVFDHSAGDTVCYECGLVLEAHSIDETSEWRTFANESGDNDPVRVG 234
M+DTFCPDCKK TEV FDHSAGDTVC ECGLVLEAHS+DETSEWRTFANES DNDPVRVG
Sbjct: 1 MSDTFCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESNDNDPVRVG 60
Query: 235 GPTNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIQAFKTITTMSDRLG 414
GP+NPLLTDGGLSTVI+KPNGA G+FLSSSLGRWQNRGSNPDRSLI AF+TI M+DRLG
Sbjct: 61 GPSNPLLTDGGLSTVIAKPNGAHGEFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120
Query: 415 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 594
LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 180
Query: 595 KEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXXXXXXXXXXSEEL 774
KEIGRAKE+IVKQLEVEMGQSMEMGTIHAGDFLRRFCS LGM N SEEL
Sbjct: 181 KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNTAVKAAQEAVQRSEEL 240
Query: 775 DIRRSPISIAAAVIYMITQLSDEKKLLRDISLATGVAEGTIRNSYKDLYQYASRLIPSSF 954
DIRRSPISIAAAVIYMITQLS++KK L+DISLATGVAEGTIRNSYKDLY YASRLIP+++
Sbjct: 241 DIRRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIPNTY 300
Query: 955 AKEEDLRNLCSP 990
AKEEDL+NLC+P
Sbjct: 301 AKEEDLKNLCTP 312
>ref|XP_002460572.1| hypothetical protein SORBIDRAFT_02g031020 [Sorghum bicolor]
gi|241923949|gb|EER97093.1| hypothetical protein
SORBIDRAFT_02g031020 [Sorghum bicolor]
Length = 312
Score = 547 bits (1409), Expect = e-153
Identities = 271/312 (86%), Positives = 288/312 (92%)
Frame = +1
Query: 55 MADTFCPDCKKSTEVVFDHSAGDTVCYECGLVLEAHSIDETSEWRTFANESGDNDPVRVG 234
M+D+FCPDCKK TEV FDHSAGDTVC ECGLVLEAHS+DETSEWRTFANES DNDPVRVG
Sbjct: 1 MSDSFCPDCKKQTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESNDNDPVRVG 60
Query: 235 GPTNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIQAFKTITTMSDRLG 414
GPTNPLLTDGGLSTVI+KPNGA G+FLSSSLGRWQNRGSNPDRSLI AF+TI M+DRLG
Sbjct: 61 GPTNPLLTDGGLSTVIAKPNGAQGEFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120
Query: 415 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 594
LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 180
Query: 595 KEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXXXXXXXXXXSEEL 774
KEIGRAKE+IVKQLEVEMGQSMEMGTIHAGDFLRRFCS LGM N SEEL
Sbjct: 181 KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVKAAQEAVQRSEEL 240
Query: 775 DIRRSPISIAAAVIYMITQLSDEKKLLRDISLATGVAEGTIRNSYKDLYQYASRLIPSSF 954
DIRRSPISIAAAVIYMITQLS++KK L+DISLATGVAEGTIRNSYKDLY YA+RLIP+++
Sbjct: 241 DIRRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPYAARLIPNTY 300
Query: 955 AKEEDLRNLCSP 990
AKEEDL+NLC+P
Sbjct: 301 AKEEDLKNLCTP 312
>ref|NP_001149721.1| transcription initiation factor IIB [Zea mays]
gi|195629762|gb|ACG36522.1| transcription initiation
factor IIB [Zea mays] gi|414590059|tpg|DAA40630.1| TPA:
transcription initiation factor IIB [Zea mays]
Length = 312
Score = 546 bits (1408), Expect = e-153
Identities = 270/312 (86%), Positives = 289/312 (92%)
Frame = +1
Query: 55 MADTFCPDCKKSTEVVFDHSAGDTVCYECGLVLEAHSIDETSEWRTFANESGDNDPVRVG 234
M+D++CPDCKK TEV FDHSAGDTVC ECGLVLEAHS+DETSEWRTFANES DNDPVRVG
Sbjct: 1 MSDSYCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESNDNDPVRVG 60
Query: 235 GPTNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIQAFKTITTMSDRLG 414
GP+NPLLTDGGLSTVI+KPNGA GDFLSSSLGRWQNRGSNPDRSLI AF+TI M+DRLG
Sbjct: 61 GPSNPLLTDGGLSTVIAKPNGAQGDFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120
Query: 415 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 594
LVATIKDRANEI+KK+EDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIFKKIEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 180
Query: 595 KEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXXXXXXXXXXSEEL 774
KEIGRAKE+IVKQLEVEMGQSMEMGTIHAGDFLRRFCS LGMTN SEEL
Sbjct: 181 KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMTNQAVNAAKEAVQRSEEL 240
Query: 775 DIRRSPISIAAAVIYMITQLSDEKKLLRDISLATGVAEGTIRNSYKDLYQYASRLIPSSF 954
DIRRSPISIAAAVIYMITQLS++KK L+DISLATGVAEGTIRNSYKDLY YASRLIP+++
Sbjct: 241 DIRRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIPNTY 300
Query: 955 AKEEDLRNLCSP 990
AKEEDL+NLC+P
Sbjct: 301 AKEEDLKNLCTP 312
>gb|ACF81664.1| unknown [Zea mays] gi|414886465|tpg|DAA62479.1| TPA: hypothetical
protein ZEAMMB73_928076 [Zea mays]
gi|414886466|tpg|DAA62480.1| TPA: hypothetical protein
ZEAMMB73_928076 [Zea mays]
Length = 312
Score = 545 bits (1404), Expect = e-152
Identities = 271/312 (86%), Positives = 287/312 (91%)
Frame = +1
Query: 55 MADTFCPDCKKSTEVVFDHSAGDTVCYECGLVLEAHSIDETSEWRTFANESGDNDPVRVG 234
M+D+FCPDCKK TEV FDHSAGD VC ECGLVLEAHS+DETSEWRTFANES DNDPVRVG
Sbjct: 1 MSDSFCPDCKKHTEVAFDHSAGDMVCTECGLVLEAHSVDETSEWRTFANESNDNDPVRVG 60
Query: 235 GPTNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIQAFKTITTMSDRLG 414
GPTNPLLTDGGLSTVI+KPNGA GDFLSSSLGRWQNRGSNPDRSLI AF+TI M+DRLG
Sbjct: 61 GPTNPLLTDGGLSTVIAKPNGAQGDFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120
Query: 415 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 594
LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 180
Query: 595 KEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXXXXXXXXXXSEEL 774
KEIGRAKE+IVKQLEVEMGQSMEMGTIHAG+FLRRFCS LGM N SEEL
Sbjct: 181 KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGNFLRRFCSTLGMNNQAVRAAQDAVKHSEEL 240
Query: 775 DIRRSPISIAAAVIYMITQLSDEKKLLRDISLATGVAEGTIRNSYKDLYQYASRLIPSSF 954
DIRRSPISIAAAVIYMITQLS++KK L+DISLATGVAEGTIRNSYKDLY YASRLIP+++
Sbjct: 241 DIRRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIPNTY 300
Query: 955 AKEEDLRNLCSP 990
AKEEDL+NLC+P
Sbjct: 301 AKEEDLKNLCTP 312
>ref|XP_002269045.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
gi|296088031|emb|CBI35314.3| unnamed protein product
[Vitis vinifera]
Length = 312
Score = 544 bits (1401), Expect = e-152
Identities = 270/312 (86%), Positives = 285/312 (91%)
Frame = +1
Query: 55 MADTFCPDCKKSTEVVFDHSAGDTVCYECGLVLEAHSIDETSEWRTFANESGDNDPVRVG 234
MAD FC DCKK+TEVVFDHSAGDTVC ECGLVLE+HSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1 MADAFCTDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
Query: 235 GPTNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIQAFKTITTMSDRLG 414
GP+NPLLTDGGLSTVI+KPNG SGDFLSSSLGRWQNRGSNPDR LI AFKTI TMSDRLG
Sbjct: 61 GPSNPLLTDGGLSTVIAKPNGVSGDFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
Query: 415 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 594
LVATIKDRANEIYKKVED KS RGRNQDA+LAACLYIACRQED+PRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDQKSTRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
Query: 595 KEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXXXXXXXXXXSEEL 774
KEIGRAKEYIVKQLE E GQS+EMGTIHAGDF+RRFCS+LGMTN SEE
Sbjct: 181 KEIGRAKEYIVKQLEAEKGQSVEMGTIHAGDFMRRFCSNLGMTNQVVKAAQEAVQKSEEF 240
Query: 775 DIRRSPISIAAAVIYMITQLSDEKKLLRDISLATGVAEGTIRNSYKDLYQYASRLIPSSF 954
DIRRSP+SIAAAVIY+ITQLSDEKKLLRDIS+ATGVAEGTIRNSYKDLY + SR+IPS +
Sbjct: 241 DIRRSPVSIAAAVIYIITQLSDEKKLLRDISIATGVAEGTIRNSYKDLYPHISRIIPSWY 300
Query: 955 AKEEDLRNLCSP 990
AKEEDLRNLCSP
Sbjct: 301 AKEEDLRNLCSP 312
>ref|XP_002284342.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
gi|297739630|emb|CBI29812.3| unnamed protein product
[Vitis vinifera]
Length = 312
Score = 543 bits (1398), Expect = e-152
Identities = 269/312 (86%), Positives = 285/312 (91%)
Frame = +1
Query: 55 MADTFCPDCKKSTEVVFDHSAGDTVCYECGLVLEAHSIDETSEWRTFANESGDNDPVRVG 234
MAD FC DCKK+TEVVFDHSAGDTVC ECGLVLE+HSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1 MADAFCTDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
Query: 235 GPTNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIQAFKTITTMSDRLG 414
GP+NPLLTDGGLSTVI+KPNG SGDFLSSSLGRWQNRGSNPDR LI AFKTI TMSDRLG
Sbjct: 61 GPSNPLLTDGGLSTVIAKPNGVSGDFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
Query: 415 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 594
LVATIKDRANEIYKKVED KS RGRNQDA+LAACLYIACRQED+PRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDQKSTRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
Query: 595 KEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXXXXXXXXXXSEEL 774
KEIGRAKEYIVKQLE E GQS+EMGTIHAGDF+RRFCS+LGMTN SEE
Sbjct: 181 KEIGRAKEYIVKQLEAEKGQSVEMGTIHAGDFMRRFCSNLGMTNQVVKAAQEAVQKSEEF 240
Query: 775 DIRRSPISIAAAVIYMITQLSDEKKLLRDISLATGVAEGTIRNSYKDLYQYASRLIPSSF 954
DIRRSP+SIAAAVIY+ITQLSDEKKLLRDIS+ATGVAEGTIRNSYKDLY + S++IPS +
Sbjct: 241 DIRRSPVSIAAAVIYIITQLSDEKKLLRDISIATGVAEGTIRNSYKDLYPHISKIIPSWY 300
Query: 955 AKEEDLRNLCSP 990
AKEEDLRNLCSP
Sbjct: 301 AKEEDLRNLCSP 312
>ref|XP_002277679.1| PREDICTED: transcription initiation factor IIB [Vitis vinifera]
gi|297734946|emb|CBI17180.3| unnamed protein product
[Vitis vinifera]
Length = 314
Score = 541 bits (1394), Expect = e-151
Identities = 271/314 (86%), Positives = 285/314 (90%), Gaps = 2/314 (0%)
Frame = +1
Query: 55 MADTFCPDCKKSTEVVFDHSAGDTVCYECGLVLEAHSIDETSEWRTFANESGDNDPVRVG 234
M DT+CP+CK+ TEVV DHSAGDTVC ECGLVLEAHSIDE SEWRTFANES DNDPVRVG
Sbjct: 1 MTDTYCPECKRYTEVVLDHSAGDTVCSECGLVLEAHSIDEASEWRTFANESADNDPVRVG 60
Query: 235 GPTNPLLTDGGLSTVISKPN--GASGDFLSSSLGRWQNRGSNPDRSLIQAFKTITTMSDR 408
GP+NPLL DGGLST+ISKP+ G S DFLSSSLGRWQNRGSNPDRSLIQAFKTI TM DR
Sbjct: 61 GPSNPLLADGGLSTLISKPSNGGPSNDFLSSSLGRWQNRGSNPDRSLIQAFKTIATMCDR 120
Query: 409 LGLVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGA 588
LGLVATIKD ANEIYKKVED K +RGRNQDAILAAC+YIACRQED+PRTVKEICSVANGA
Sbjct: 121 LGLVATIKDLANEIYKKVEDQKPLRGRNQDAILAACIYIACRQEDKPRTVKEICSVANGA 180
Query: 589 TKKEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXXXXXXXXXXSE 768
TKKEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTN SE
Sbjct: 181 TKKEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNQAVKAAQEAVQKSE 240
Query: 769 ELDIRRSPISIAAAVIYMITQLSDEKKLLRDISLATGVAEGTIRNSYKDLYQYASRLIPS 948
ELDIRRSPIS+AAAVIYMITQLSD+KKLL+DISLATGVAEGTIRNSYKDLY YASR+IPS
Sbjct: 241 ELDIRRSPISVAAAVIYMITQLSDDKKLLKDISLATGVAEGTIRNSYKDLYPYASRIIPS 300
Query: 949 SFAKEEDLRNLCSP 990
S+AKEEDLRNLCSP
Sbjct: 301 SYAKEEDLRNLCSP 314
>gb|ABR16853.1| unknown [Picea sitchensis]
Length = 313
Score = 540 bits (1390), Expect = e-151
Identities = 272/313 (86%), Positives = 286/313 (91%), Gaps = 1/313 (0%)
Frame = +1
Query: 55 MADTF-CPDCKKSTEVVFDHSAGDTVCYECGLVLEAHSIDETSEWRTFANESGDNDPVRV 231
M DT CPDCKK TEVVFDHSAGDTVC ECGLVLEAHSIDETSEWRTFANE+GDNDPVRV
Sbjct: 1 MIDTVSCPDCKKQTEVVFDHSAGDTVCVECGLVLEAHSIDETSEWRTFANETGDNDPVRV 60
Query: 232 GGPTNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIQAFKTITTMSDRL 411
GGP+NPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLI AFKTI TMSDRL
Sbjct: 61 GGPSNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIMAFKTIGTMSDRL 120
Query: 412 GLVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGAT 591
GLVATIKDRANEIYKKVED KSIRGRNQDAILAACLYIACRQED+PRTVKEICSVANGA+
Sbjct: 121 GLVATIKDRANEIYKKVEDSKSIRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGAS 180
Query: 592 KKEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXXXXXXXXXXSEE 771
KKE+GRAKE+IVKQLE EMG+SMEMGTIHAGDFLRRFCSHLGM + SEE
Sbjct: 181 KKEVGRAKEFIVKQLEEEMGKSMEMGTIHAGDFLRRFCSHLGMGHQAVKAATEAVKKSEE 240
Query: 772 LDIRRSPISIAAAVIYMITQLSDEKKLLRDISLATGVAEGTIRNSYKDLYQYASRLIPSS 951
LDIRRSPISIAAA IYMI+QLS+EKKLLRDIS ATGVAEGTIRNSYKDLY +A+RLIP
Sbjct: 241 LDIRRSPISIAAAAIYMISQLSEEKKLLRDISRATGVAEGTIRNSYKDLYPHAARLIPDW 300
Query: 952 FAKEEDLRNLCSP 990
FAKEEDL+NLC+P
Sbjct: 301 FAKEEDLKNLCAP 313
>ref|XP_002322722.1| Transcription initiation factor IIB-1 family protein [Populus
trichocarpa] gi|222867352|gb|EEF04483.1| Transcription
initiation factor IIB-1 family protein [Populus
trichocarpa]
Length = 312
Score = 530 bits (1366), Expect = e-148
Identities = 263/312 (84%), Positives = 282/312 (90%)
Frame = +1
Query: 55 MADTFCPDCKKSTEVVFDHSAGDTVCYECGLVLEAHSIDETSEWRTFANESGDNDPVRVG 234
M D FC DCK+ TEVVFDHSAGDTVC ECGLVLE+HSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1 MGDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
Query: 235 GPTNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIQAFKTITTMSDRLG 414
GPTNPLLTDGGLSTVI+KPNGASG+FLSSSLGRWQNRGSNPDR LI AFKTI TMSDRLG
Sbjct: 61 GPTNPLLTDGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLITAFKTIATMSDRLG 120
Query: 415 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 594
LVATIKDRANEIYKKVED KS RGRNQDA+LAACLYIACRQED+PRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
Query: 595 KEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXXXXXXXXXXSEEL 774
KEIGRAKEYIVKQL +E GQS+EMGTIHAGDF+RRFCS+LGM+N SE+
Sbjct: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMSNHTVKAATEAVKTSEQF 240
Query: 775 DIRRSPISIAAAVIYMITQLSDEKKLLRDISLATGVAEGTIRNSYKDLYQYASRLIPSSF 954
DIRRSPISIAAAVIY+ITQLSD+KK LRDISLATGVAEGTIRNSYKDLY + S++IPS +
Sbjct: 241 DIRRSPISIAAAVIYIITQLSDDKKPLRDISLATGVAEGTIRNSYKDLYPHVSKIIPSWY 300
Query: 955 AKEEDLRNLCSP 990
A EEDL+NLCSP
Sbjct: 301 ASEEDLKNLCSP 312
>ref|XP_006421304.1| hypothetical protein CICLE_v10005479mg [Citrus clementina]
gi|568880032|ref|XP_006492943.1| PREDICTED:
transcription initiation factor IIB-2-like [Citrus
sinensis] gi|557523177|gb|ESR34544.1| hypothetical
protein CICLE_v10005479mg [Citrus clementina]
Length = 312
Score = 528 bits (1361), Expect = e-147
Identities = 262/312 (83%), Positives = 281/312 (90%)
Frame = +1
Query: 55 MADTFCPDCKKSTEVVFDHSAGDTVCYECGLVLEAHSIDETSEWRTFANESGDNDPVRVG 234
M D FC DCKK TEVVFDHSAGDTVC ECGLVLE+HSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1 MTDAFCSDCKKHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
Query: 235 GPTNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIQAFKTITTMSDRLG 414
GPTNPLL DGGLSTVI+KPNGASG+FLSSSLGRWQNRGSNPDR LI AFKTI TMSDRLG
Sbjct: 61 GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
Query: 415 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 594
LVATIKDRANEIYKKVED KS RGRNQDA+LAACLYIACRQED+PRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
Query: 595 KEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXXXXXXXXXXSEEL 774
KEIGRAKEYIVKQL +E GQS+EMGTIHAGDF+RRFCS+LGM N SEE
Sbjct: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240
Query: 775 DIRRSPISIAAAVIYMITQLSDEKKLLRDISLATGVAEGTIRNSYKDLYQYASRLIPSSF 954
DIRRSPISIAAAVIY+ITQLSD+KK L+DIS+ATGVAEGTIRNSYKDLY + S++IP+ +
Sbjct: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPNWY 300
Query: 955 AKEEDLRNLCSP 990
AKEEDL+NLCSP
Sbjct: 301 AKEEDLKNLCSP 312
>ref|XP_002534470.1| transcription initiation factor iib, putative [Ricinus communis]
gi|223525233|gb|EEF27913.1| transcription initiation
factor iib, putative [Ricinus communis]
Length = 312
Score = 528 bits (1361), Expect = e-147
Identities = 262/312 (83%), Positives = 281/312 (90%)
Frame = +1
Query: 55 MADTFCPDCKKSTEVVFDHSAGDTVCYECGLVLEAHSIDETSEWRTFANESGDNDPVRVG 234
M D +C DCK+ TEVVFDHSAGDTVC ECGLVLE+HSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1 MGDAYCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
Query: 235 GPTNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIQAFKTITTMSDRLG 414
GPTNPLL DGGLSTVI+KPNGASG+FLSSSLGRWQNRGSNPDR LI AFKTI TMSDRLG
Sbjct: 61 GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
Query: 415 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 594
LVATIKDRANEIYKKVED KS RGRNQDA+LAACLYIACRQED+PRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
Query: 595 KEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXXXXXXXXXXSEEL 774
KEIGRAKEYIVKQL +E GQS+EMGTIHAGDF+RRFCS+LGM N SEE
Sbjct: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAMKAAQEAVQKSEEF 240
Query: 775 DIRRSPISIAAAVIYMITQLSDEKKLLRDISLATGVAEGTIRNSYKDLYQYASRLIPSSF 954
DIRRSPISIAAAVIY+I+QLSD+KKLLRDIS ATGVAEGTIRNSYKDLY + S++IPS +
Sbjct: 241 DIRRSPISIAAAVIYIISQLSDDKKLLRDISHATGVAEGTIRNSYKDLYPHVSKIIPSWY 300
Query: 955 AKEEDLRNLCSP 990
AKEEDL+NLCSP
Sbjct: 301 AKEEDLKNLCSP 312
>ref|XP_007028688.1| Cyclin-like family protein isoform 1 [Theobroma cacao]
gi|508717293|gb|EOY09190.1| Cyclin-like family protein
isoform 1 [Theobroma cacao]
Length = 312
Score = 527 bits (1358), Expect = e-147
Identities = 262/312 (83%), Positives = 281/312 (90%)
Frame = +1
Query: 55 MADTFCPDCKKSTEVVFDHSAGDTVCYECGLVLEAHSIDETSEWRTFANESGDNDPVRVG 234
MAD FC DCK+ TEVVFDHSAGDTVC ECGLVLE+HSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1 MADAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
Query: 235 GPTNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIQAFKTITTMSDRLG 414
GPTNPLL DGGLSTVI+KPNGASG+FLSSSLGRWQNRGSNPDR LI AFKTI TMSDRLG
Sbjct: 61 GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
Query: 415 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 594
LVATIKDRANEIYKKVED KS RGRNQDA+LAACLYIACRQED+PRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
Query: 595 KEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXXXXXXXXXXSEEL 774
KEIGRAKEYIVKQL +E GQS+EMGTIHAGDF+RRFCS+LGM N SEE
Sbjct: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240
Query: 775 DIRRSPISIAAAVIYMITQLSDEKKLLRDISLATGVAEGTIRNSYKDLYQYASRLIPSSF 954
DIRRSPISIAAAVIY+ITQLSD+KK LRDIS+ATGVAEGTIRNSYKDLY + S++IP+ +
Sbjct: 241 DIRRSPISIAAAVIYIITQLSDDKKPLRDISVATGVAEGTIRNSYKDLYPHVSKIIPNWY 300
Query: 955 AKEEDLRNLCSP 990
AK EDL+NLCSP
Sbjct: 301 AKGEDLKNLCSP 312
>ref|XP_004304334.1| PREDICTED: transcription initiation factor IIB-like [Fragaria vesca
subsp. vesca]
Length = 312
Score = 527 bits (1357), Expect = e-147
Identities = 260/312 (83%), Positives = 282/312 (90%)
Frame = +1
Query: 55 MADTFCPDCKKSTEVVFDHSAGDTVCYECGLVLEAHSIDETSEWRTFANESGDNDPVRVG 234
M+D +C DCK+ TEVVFDHSAGDTVC ECGLVLE+HSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1 MSDAYCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
Query: 235 GPTNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIQAFKTITTMSDRLG 414
GPTNPLL DGGLSTVI+KPNGASG+FLSSSLGRWQNRGSNPDR LI AFKTI TMSDRLG
Sbjct: 61 GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
Query: 415 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 594
LVATIKDRANEIYK+VED KS RGRNQDA+LAACLYIACRQED+PRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
Query: 595 KEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXXXXXXXXXXSEEL 774
KEIGRAKEYIVKQL +E GQS+EMGTIHAGDF+RRFCS+LGM N SEE
Sbjct: 181 KEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240
Query: 775 DIRRSPISIAAAVIYMITQLSDEKKLLRDISLATGVAEGTIRNSYKDLYQYASRLIPSSF 954
DIRRSPISIAAAVIY+ITQLSD+KK L+DISLATGVAEGTIRNSYKDLY + S++IP+ +
Sbjct: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPHVSKIIPNWY 300
Query: 955 AKEEDLRNLCSP 990
AKEEDL+NLCSP
Sbjct: 301 AKEEDLKNLCSP 312
>ref|XP_002882661.1| transcription initiation factor IIB-2 [Arabidopsis lyrata subsp.
lyrata] gi|565481070|ref|XP_006298175.1| hypothetical
protein CARUB_v10014225mg [Capsella rubella]
gi|297328501|gb|EFH58920.1| transcription initiation
factor IIB-2 [Arabidopsis lyrata subsp. lyrata]
gi|482566884|gb|EOA31073.1| hypothetical protein
CARUB_v10014225mg [Capsella rubella]
Length = 312
Score = 525 bits (1352), Expect = e-146
Identities = 261/312 (83%), Positives = 282/312 (90%)
Frame = +1
Query: 55 MADTFCPDCKKSTEVVFDHSAGDTVCYECGLVLEAHSIDETSEWRTFANESGDNDPVRVG 234
M+D FC DCK+ TEVVFDHSAGDTVC ECGLVLE+HSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1 MSDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
Query: 235 GPTNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIQAFKTITTMSDRLG 414
GPTNPLL DGGL+TVISKPNG+SGDFLSSSLGRWQNRGSNPDR LI AFKTI TM+DRLG
Sbjct: 61 GPTNPLLADGGLTTVISKPNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120
Query: 415 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 594
LVATIKDRANEIYK+VED KS RGRNQDA+LAACLYIACRQED+PRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
Query: 595 KEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNXXXXXXXXXXXXSEEL 774
KEIGRAKEYIVKQL +E GQS+EMGTIHAGDF+RRFCS+LGMTN SEE
Sbjct: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEEF 240
Query: 775 DIRRSPISIAAAVIYMITQLSDEKKLLRDISLATGVAEGTIRNSYKDLYQYASRLIPSSF 954
DIRRSPISIAAAVIY+ITQLSDEKK LRDIS+ATGVAEGTIRNSYKDLY + S++IP+ +
Sbjct: 241 DIRRSPISIAAAVIYIITQLSDEKKPLRDISVATGVAEGTIRNSYKDLYPHLSKIIPAWY 300
Query: 955 AKEEDLRNLCSP 990
AKEEDL+NL SP
Sbjct: 301 AKEEDLKNLQSP 312