BLASTX nr result
ID: Akebia22_contig00018304
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia22_contig00018304
(235 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 70 3e-10
dbj|BAB08692.1| non-LTR retroelement reverse transcriptase-like ... 61 2e-07
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 60 3e-07
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal... 59 7e-07
gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana] 59 9e-07
gb|AAD24652.1| putative non-LTR retroelement reverse transcripta... 57 2e-06
gb|AAF79288.1|AC068602_11 F14D16.18 [Arabidopsis thaliana] 57 3e-06
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 56 5e-06
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 55 8e-06
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 70.1 bits (170), Expect = 3e-10
Identities = 28/77 (36%), Positives = 48/77 (62%)
Frame = +2
Query: 5 ISWKRIARNRREKGLGFRDMYL*NRAGIARHVWNIASNKGSIWVD*IKKNLIKGNNF*NM 184
++W I + E GLG +D++ N+A + H+WN+ S+ + W D +K L+KGN+F N
Sbjct: 682 VAWSEICLPKCEGGLGIKDLHCWNKALMISHIWNLVSSSSNFWTDWVKVYLLKGNSFWNA 741
Query: 185 ATTTKASWMWRKVMQMR 235
+ SW WRK++++R
Sbjct: 742 PLPSICSWNWRKLLKIR 758
>dbj|BAB08692.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana] gi|93007380|gb|ABE97193.1|
hypothetical protein At5g13655 [Arabidopsis thaliana]
Length = 385
Score = 60.8 bits (146), Expect = 2e-07
Identities = 26/78 (33%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Frame = +2
Query: 5 ISWKRIARNRREKGLGFRDMYL*NRAGIARHVWNIASNKGSIWVD*IKKNLIKGNNF*NM 184
++W + + E GLG R + N+ + + +W I S KGS+WVD +KK+L++G + +
Sbjct: 19 VAWSVVCTPKSEGGLGLRAVEETNKVCMLKLIWRILSAKGSLWVDWVKKHLLRGGSLWAV 78
Query: 185 -ATTTKASWMWRKVMQMR 235
T+++ SW+W+K+++ R
Sbjct: 79 KETSSRGSWIWKKLLKYR 96
>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7267919|emb|CAB78261.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 662
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/77 (33%), Positives = 45/77 (58%)
Frame = +2
Query: 5 ISWKRIARNRREKGLGFRDMYL*NRAGIARHVWNIASNKGSIWVD*IKKNLIKGNNF*NM 184
I+W+ + R +RE GLG + + N + +W I S S+WV I+ L+K N F +
Sbjct: 378 IAWETVCRPKREGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQWIRTYLLKRNTFWSF 437
Query: 185 ATTTKASWMWRKVMQMR 235
+ ++ SWMW+K+++ R
Sbjct: 438 RSASQGSWMWKKLLKYR 454
>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 58.9 bits (141), Expect = 7e-07
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +2
Query: 5 ISWKRIARNRREKGLGFRDMYL*NRAGIARHVWNIASNKGSIWVD*IKKNLIKGNNF*NM 184
+SW I + ++E GLG R + N + + +W + SN S+WV K NL+K +F ++
Sbjct: 265 VSWDDICKPKQEGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNLLKQESFWSL 324
Query: 185 A-TTTKASWMWRKVMQMR 235
++ SWMW+K+++ R
Sbjct: 325 TPNSSLGSWMWKKMLKYR 342
>gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana]
Length = 382
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +2
Query: 5 ISWKRIARNRREKGLGFRDMYL*NRAGIARHVWNIASNKGSIWVD*IKKNLIKGNNF*NM 184
+SW + + ++E GLG R + N + +W + S+ S+WV I+K L+K + F ++
Sbjct: 277 LSWVDVCKPKQEGGLGLRPLKEINDVCCLKLIWRLVSHANSLWVQWIEKYLLKADTFWSV 336
Query: 185 -ATTTKASWMWRKVMQMR 235
ATT + SWMW K+++ R
Sbjct: 337 KATTNRGSWMWSKLIKYR 354
>gb|AAD24652.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 977
Score = 57.4 bits (137), Expect = 2e-06
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +2
Query: 5 ISWKRIARNRREKGLGFRDMYL*NRAGIARHVWNIASNKGSIWVD*IKKNLIKGNNF*NM 184
+SW + + ++E GLG R + N + VW I S+ S+WV I+K L+K F +
Sbjct: 817 VSWDDVCKPKKEGGLGLRSLKEANDVCCLKVVWKIVSHGNSLWVKWIEKFLLKNETFWFV 876
Query: 185 -ATTTKASWMWRKVMQMR 235
TT SWMWRK+++ R
Sbjct: 877 KENTTLGSWMWRKLIKFR 894
>gb|AAF79288.1|AC068602_11 F14D16.18 [Arabidopsis thaliana]
Length = 582
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +2
Query: 5 ISWKRIARNRREKGLGFRDMYL*NRAGIARHVWNIASNKGSIWVD*IKKNLIKGNNF*NM 184
++W + ++E GLG R + N+ + + +W I S + S+WV+ +KK LI+ +F +
Sbjct: 204 VAWSEVCSPKQEGGLGLRSIAEANKVCVLKLIWRILSARRSLWVELVKKYLIRRGSFWLV 263
Query: 185 -ATTTKASWMWRKVMQMR 235
TT SW+W+K+++ R
Sbjct: 264 KENTTCGSWIWKKILKYR 281
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 56.2 bits (134), Expect = 5e-06
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +2
Query: 5 ISWKRIARNRREKGLGFRDMYL*NRAGIARHVWNIASNKGSIWVD*IKKNLIKGNNF*NM 184
I+W + + + E GLG + + N + + +W I S + S+WV + K+LI+ F ++
Sbjct: 1007 IAWSEVCKLKEEGGLGLKPLKEANEVSLLKLIWRILSARDSLWVKWVNKHLIRKETFWSV 1066
Query: 185 ATTT-KASWMWRKVMQMR 235
T SW+WRK+++ R
Sbjct: 1067 KENTGLGSWLWRKILKQR 1084
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 55.5 bits (132), Expect = 8e-06
Identities = 24/78 (30%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +2
Query: 5 ISWKRIARNRREKGLGFRDMYL*NRAGIARHVWNIASNKGSIWVD*IKKNLIKGNNF*NM 184
+SW I + ++E GLG + + N+ + +W + S + S+WV + NL+K +F ++
Sbjct: 581 VSWDEICKPKKEGGLGLQSLREANKVSSLKLIWRLLSCQDSLWVKWTRMNLLKKESFWSI 640
Query: 185 AT-TTKASWMWRKVMQMR 235
T +T SW+WR++++ R
Sbjct: 641 GTHSTLGSWIWRRLLKHR 658