BLASTX nr result

ID: Akebia22_contig00018065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00018065
         (641 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC11331.1| Eukaryotic translation initiation factor 3 subuni...    64   5e-08
gb|EXB55057.1| Eukaryotic translation initiation factor 3 subuni...    64   5e-08
ref|XP_003554329.1| PREDICTED: eukaryotic translation initiation...    61   3e-07
ref|XP_003521341.1| PREDICTED: eukaryotic translation initiation...    59   1e-06

>gb|EXC11331.1| Eukaryotic translation initiation factor 3 subunit A [Morus
           notabilis]
          Length = 830

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 6/54 (11%)
 Frame = +1

Query: 331 PPTSGKYVPKFRREKTEGPGGMAPTPEPERWGRQEDR-----GDKWR-SDERRP 474
           PP++GKYVP+FR +  EG    APTPEP+RWGR ++R      D+WR SD+RRP
Sbjct: 757 PPSTGKYVPRFRLQNPEG-SAQAPTPEPDRWGRHDNRPSQPSSDRWRSSDDRRP 809


>gb|EXB55057.1| Eukaryotic translation initiation factor 3 subunit A [Morus
           notabilis]
          Length = 844

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 6/54 (11%)
 Frame = +1

Query: 331 PPTSGKYVPKFRREKTEGPGGMAPTPEPERWGRQEDR-----GDKWR-SDERRP 474
           PP++GKYVP+FR +  EG    APTPEP+RWGR ++R      D+WR SD+RRP
Sbjct: 771 PPSTGKYVPRFRLQNPEG-SAQAPTPEPDRWGRHDNRPSQPSSDRWRSSDDRRP 823


>ref|XP_003554329.1| PREDICTED: eukaryotic translation initiation factor 3 subunit A-like
            [Glycine max] gi|47076999|dbj|BAD18434.1| unnamed protein
            product [Homo sapiens]
          Length = 957

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 29/47 (61%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
 Frame = +1

Query: 334  PTSGKYVPKFRREKTEGPGGMAPTPEPERW-GRQEDRGDKWRSDERR 471
            PT GKYVPKFRRE+TE   G AP PE +RW       GD+WRSD+RR
Sbjct: 890  PTPGKYVPKFRRERTES-AGAAPPPETDRWNSSSRPDGDRWRSDDRR 935


>ref|XP_003521341.1| PREDICTED: eukaryotic translation initiation factor 3 subunit A-like
            isoform X1 [Glycine max] gi|571446060|ref|XP_006576984.1|
            PREDICTED: eukaryotic translation initiation factor 3
            subunit A-like isoform X2 [Glycine max]
          Length = 958

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
 Frame = +1

Query: 334  PTSGKYVPKFRREKTEGPGGMAPTPEPERW--GRQEDRGDKWRSDERR 471
            PT GKYVPKFRR++TE  G  AP PE +RW    + D GD+WR D+R+
Sbjct: 890  PTPGKYVPKFRRQRTESTGA-APPPETDRWNSSSRPDGGDRWRGDDRK 936


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