BLASTX nr result

ID: Akebia22_contig00016532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00016532
         (875 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containi...   407   e-111
ref|XP_007204422.1| hypothetical protein PRUPE_ppb002215mg [Prun...   378   e-102
ref|XP_004308620.1| PREDICTED: pentatricopeptide repeat-containi...   377   e-102
gb|EXB41187.1| hypothetical protein L484_005223 [Morus notabilis]     367   3e-99
ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containi...   357   4e-96
ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   354   2e-95
ref|XP_007028547.1| Pentatricopeptide repeat (PPR) superfamily p...   354   3e-95
emb|CBI30094.3| unnamed protein product [Vitis vinifera]              353   5e-95
ref|XP_004498123.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   343   5e-92
ref|XP_006587960.1| PREDICTED: pentatricopeptide repeat-containi...   337   3e-90
ref|XP_003589755.1| Pentatricopeptide repeat-containing protein ...   335   1e-89
ref|XP_006340092.1| PREDICTED: pentatricopeptide repeat-containi...   333   7e-89
ref|XP_004237347.1| PREDICTED: pentatricopeptide repeat-containi...   330   4e-88
ref|XP_007161435.1| hypothetical protein PHAVU_001G068400g [Phas...   329   1e-87
ref|XP_006296159.1| hypothetical protein CARUB_v10025312mg [Caps...   327   3e-87
ref|NP_181048.1| pentatricopeptide repeat-containing protein [Ar...   326   8e-87
ref|XP_002881370.1| pentatricopeptide repeat-containing protein ...   323   5e-86
ref|XP_006410659.1| hypothetical protein EUTSA_v10016379mg [Eutr...   317   4e-84
ref|XP_002322628.1| pentatricopeptide repeat-containing family p...   302   1e-79
gb|EYU18647.1| hypothetical protein MIMGU_mgv1a022303mg, partial...   285   2e-74

>ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Vitis vinifera]
          Length = 635

 Score =  407 bits (1047), Expect = e-111
 Identities = 195/272 (71%), Positives = 232/272 (85%), Gaps = 2/272 (0%)
 Frame = -3

Query: 813 QALLPFLPRLSLSWPQHFFLYHSIN--KPNKISTTERDHTIDQNISRSNWQITKLSREGK 640
           Q  +P L  L L     F+LYHSIN  +  KIS   +D T+D N++R NW IT LS++G+
Sbjct: 8   QITIPALINLKLLRIPGFYLYHSINDYRTAKISIPRKDFTVDGNVARCNWMITNLSKDGR 67

Query: 639 ISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKANAKKNVVTWTALIAGYIR 460
           I EAR+LFD+M E DV+TWTTVISGYIKCG+++EAR LFD+ +AKKNVVTWTA++ GYIR
Sbjct: 68  IMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYIR 127

Query: 459 SNQISEAEKLFVQMPDKNVVSWNTMISGYAQNGRVDQAFELFEKMPDRNIVSWNTIITAF 280
           SN+IS+AEKLF +MP+KNVVSWNTMI GYAQNGR+D A  LFEKMP+RN+VSWNT+++  
Sbjct: 128 SNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSML 187

Query: 279 AQSGRIDEARRLFDQMPERDVISWTAMITGLSQNGRIDEARELFDKMPERNVVSWNAMIT 100
           AQ GRI+EARRLFD+MPERDVISWTAMI GLS+NGRIDEAR LFD+MPERNVVSWNAMIT
Sbjct: 188 AQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMIT 247

Query: 99  GYAQNLRLDEALDIFERMPKRDVPSWNTMIPG 4
           GYAQNLRLDEALD+FERMP+RD+PSWNTMI G
Sbjct: 248 GYAQNLRLDEALDLFERMPERDLPSWNTMITG 279



 Score =  200 bits (509), Expect = 5e-49
 Identities = 97/206 (47%), Positives = 148/206 (71%), Gaps = 2/206 (0%)
 Frame = -3

Query: 738 KPNKISTTER--DHTIDQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISG 565
           + NKIS  E+  +   ++N+   N  I   ++ G+I  A  LF++MPER+VV+W TV+S 
Sbjct: 127 RSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSM 186

Query: 564 YIKCGLVKEARFLFDKANAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTM 385
             +CG ++EAR LFD+   +++V++WTA+IAG  ++ +I EA  LF +MP++NVVSWN M
Sbjct: 187 LAQCGRIEEARRLFDRM-PERDVISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAM 245

Query: 384 ISGYAQNGRVDQAFELFEKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPERDVISWT 205
           I+GYAQN R+D+A +LFE+MP+R++ SWNT+IT   Q+G +  AR+LF++MP+++VISWT
Sbjct: 246 ITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWT 305

Query: 204 AMITGLSQNGRIDEARELFDKMPERN 127
            MITG  Q G  +EA ++F +M   N
Sbjct: 306 TMITGCVQEGESEEALKIFSRMLSTN 331



 Score =  122 bits (306), Expect = 2e-25
 Identities = 81/296 (27%), Positives = 137/296 (46%), Gaps = 77/296 (26%)
 Frame = -3

Query: 696  DQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 517
            ++N+   N  ++ L++ G+I EAR+LFD+MPERDV++WT +I+G  K G + EAR LFD+
Sbjct: 174  ERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDR 233

Query: 516  ANAKKNVVTWTALIAGY-------------------------------IRSNQISEAEKL 430
               ++NVV+W A+I GY                               I++  +  A KL
Sbjct: 234  M-PERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARKL 292

Query: 429  FVQMPDKNVVSWNTMISGYAQNGRVDQAFELFEKMPDRNIVSWN---------------- 298
            F +MP KNV+SW TMI+G  Q G  ++A ++F +M   N    N                
Sbjct: 293  FNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAG 352

Query: 297  ------------------------TIITAFAQSGRIDEARRLFDQ--MPERDVISWTAMI 196
                                     +I  +++ G +  AR++FD     +RD++SW  +I
Sbjct: 353  LGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGII 412

Query: 195  TGLSQNGRIDEARELFDKMPERNV----VSWNAMITGYAQNLRLDEALDIFERMPK 40
               + +G   EA   F +M +       V++  +++  +    ++E L  F+ + K
Sbjct: 413  AAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVK 468


>ref|XP_007204422.1| hypothetical protein PRUPE_ppb002215mg [Prunus persica]
           gi|462399953|gb|EMJ05621.1| hypothetical protein
           PRUPE_ppb002215mg [Prunus persica]
          Length = 634

 Score =  378 bits (971), Expect = e-102
 Identities = 183/280 (65%), Positives = 229/280 (81%), Gaps = 3/280 (1%)
 Frame = -3

Query: 831 LPLSIF-QALLPFLPRLSLSWPQHFFLYHSINKP--NKISTTERDHTIDQNISRSNWQIT 661
           LPL  F QALLP L  L        FLYHS+N     +I++ +RD +   N+++SNW IT
Sbjct: 9   LPLKGFSQALLPMLCSLK-------FLYHSMNYTVTPRITSPDRDFSASFNVAQSNWLIT 61

Query: 660 KLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKANAKKNVVTWTA 481
           +LS++GK  EARQ+FD MP++DVVTWTTVI+GYI+CG+++EAR LFD+ +AKK+V+TWTA
Sbjct: 62  RLSKDGKFREARQVFDGMPDKDVVTWTTVITGYIRCGMMEEARSLFDRVDAKKDVITWTA 121

Query: 480 LIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQNGRVDQAFELFEKMPDRNIVSW 301
           L++GYIR  Q+ EAE+LF QMP KNVVSWNTMI GYA+N +VD A ELFE+MP++N+VSW
Sbjct: 122 LVSGYIRLKQMKEAERLFYQMPVKNVVSWNTMIDGYARNCQVDMALELFERMPEKNVVSW 181

Query: 300 NTIITAFAQSGRIDEARRLFDQMPERDVISWTAMITGLSQNGRIDEARELFDKMPERNVV 121
           NT++TA A SGRI+EAR  F+ MPERDVISWTAM+ G S+NG IDEARE FD+MP+RNVV
Sbjct: 182 NTVLTALAHSGRIEEARTRFNLMPERDVISWTAMVAGFSRNGMIDEAREFFDRMPKRNVV 241

Query: 120 SWNAMITGYAQNLRLDEALDIFERMPKRDVPSWNTMIPGF 1
           SWNAMITGY QN+RLDEAL++FERMP RD+PSWNTMI GF
Sbjct: 242 SWNAMITGYTQNMRLDEALELFERMPGRDMPSWNTMITGF 281



 Score =  178 bits (452), Expect = 2e-42
 Identities = 87/194 (44%), Positives = 133/194 (68%)
 Frame = -3

Query: 693 QNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKA 514
           +N+   N  I   +R  ++  A +LF++MPE++VV+W TV++     G ++EAR  F+  
Sbjct: 145 KNVVSWNTMIDGYARNCQVDMALELFERMPEKNVVSWNTVLTALAHSGRIEEARTRFNLM 204

Query: 513 NAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQNGRVDQAFELF 334
             +++V++WTA++AG+ R+  I EA + F +MP +NVVSWN MI+GY QN R+D+A ELF
Sbjct: 205 -PERDVISWTAMVAGFSRNGMIDEAREFFDRMPKRNVVSWNAMITGYTQNMRLDEALELF 263

Query: 333 EKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPERDVISWTAMITGLSQNGRIDEARE 154
           E+MP R++ SWNT+IT F Q+G +  A+ LF +MP+++VISWT MITG  Q+G+ ++A  
Sbjct: 264 ERMPGRDMPSWNTMITGFIQNGDLKRAQELFIRMPQKNVISWTTMITGYVQDGQNEKALM 323

Query: 153 LFDKMPERNVVSWN 112
            F KM   N V  N
Sbjct: 324 FFSKMLVDNGVKPN 337



 Score = 92.8 bits (229), Expect = 2e-16
 Identities = 60/203 (29%), Positives = 112/203 (55%), Gaps = 13/203 (6%)
 Frame = -3

Query: 708 DHTIDQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARF 529
           D    +N+   N  IT  ++  ++ EA +LF++MP RD+ +W T+I+G+I+ G +K A+ 
Sbjct: 233 DRMPKRNVVSWNAMITGYTQNMRLDEALELFERMPGRDMPSWNTMITGFIQNGDLKRAQE 292

Query: 528 LFDKANAKKNVVTWTALIAGYIRSNQISEAEKLFVQM-------PDK----NVVSWNTMI 382
           LF +   +KNV++WT +I GY++  Q  +A   F +M       P++    +V+S  + +
Sbjct: 293 LFIRM-PQKNVISWTTMITGYVQDGQNEKALMFFSKMLVDNGVKPNQGTFVSVLSACSNL 351

Query: 381 SGYAQNGRVDQAFELFEKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQ--MPERDVISW 208
           +G+++  ++ Q            +VS   +I  +++ G +  AR++FD      RD++SW
Sbjct: 352 AGFSEGQQIHQMISKTVHHECAFLVS--ALINMYSKCGELVTARKMFDDGLTIHRDMVSW 409

Query: 207 TAMITGLSQNGRIDEARELFDKM 139
             MI   + +G   EA  LF++M
Sbjct: 410 NGMIAAYAHHGCGIEAINLFNEM 432


>ref|XP_004308620.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 714

 Score =  377 bits (967), Expect = e-102
 Identities = 173/253 (68%), Positives = 219/253 (86%), Gaps = 2/253 (0%)
 Frame = -3

Query: 753 YHSINKPN--KISTTERDHTIDQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWT 580
           YHS+ +    +I+T  RDH+   ++++SNW ITKLSR+G+I EARQ+FD+MPERDVVTWT
Sbjct: 26  YHSMTQKASPRITTPHRDHSASSDVAKSNWLITKLSRDGRIREARQVFDEMPERDVVTWT 85

Query: 579 TVISGYIKCGLVKEARFLFDKANAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVV 400
           TVI+ Y+K G+++EAR LFD+A+A KNV+TWTAL+ GYIR  ++ EAE LF QMP +NVV
Sbjct: 86  TVITAYVKSGMLEEARSLFDRADAVKNVITWTALVGGYIRLRRLEEAEMLFYQMPVRNVV 145

Query: 399 SWNTMISGYAQNGRVDQAFELFEKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPERD 220
           SWNTMI GYA++ RVD+A ELFE+MP+RN+VSWNT++TA AQ GRI+EARRLF  MPERD
Sbjct: 146 SWNTMIDGYARSRRVDEALELFERMPERNVVSWNTVLTALAQCGRIEEARRLFGLMPERD 205

Query: 219 VISWTAMITGLSQNGRIDEARELFDKMPERNVVSWNAMITGYAQNLRLDEALDIFERMPK 40
           VISWTAM+ GLS+NGR+DEARE+FD+MP RNVVSWNAM+TGYAQN RL+EAL++FERMP+
Sbjct: 206 VISWTAMVAGLSRNGRVDEAREVFDRMPRRNVVSWNAMVTGYAQNGRLEEALELFERMPE 265

Query: 39  RDVPSWNTMIPGF 1
           RD+PSWNTM+ GF
Sbjct: 266 RDMPSWNTMVTGF 278



 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 68/282 (24%), Positives = 134/282 (47%), Gaps = 52/282 (18%)
 Frame = -3

Query: 693  QNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKA 514
            +N+   N  +T  ++ G++ EA +LF++MPERD+ +W T+++G+I+ G ++ A  LF + 
Sbjct: 235  RNVVSWNAMVTGYAQNGRLEEALELFERMPERDMPSWNTMVTGFIQNGDLERAWELFVQM 294

Query: 513  NAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWN------------------- 391
              +KNV++WT +I GY++  +  EA  +F +M   N    N                   
Sbjct: 295  -PQKNVISWTTMITGYVQDGRNEEALMIFSKMVVDNGARPNEGTFVSILSACSNLAGLCE 353

Query: 390  ---------------------TMISGYAQNGRVDQAFELFE--KMPDRNIVSWNTIITAF 280
                                  +I+ Y++ G +  A ++FE      R+ +SWN +I A+
Sbjct: 354  GRQMHQMIIKTVYQECVHLVSALINMYSKCGELVSARKMFEDGSTIHRDYISWNGMIAAY 413

Query: 279  AQSGRIDEARRLFDQMPE----RDVISWTAMITGLSQNGRIDEARELFDKMPERNVV--- 121
            A  G   EA  L+++M +     D +++  +++  S  G + E   LFD++ +   +   
Sbjct: 414  AHHGCGTEAINLYNEMRQLGFKPDDVTYVGLLSACSHAGLVAEGLNLFDELLKDGSIRVR 473

Query: 120  --SWNAMITGYAQNLRLDEALDIFERM-PKRDVPSWNTMIPG 4
               +  ++    +  RL EA D+ E++   +   +W  ++ G
Sbjct: 474  EDHYTCLVDLCGRAGRLKEAFDVLEKLGTNQSASNWGALLAG 515


>gb|EXB41187.1| hypothetical protein L484_005223 [Morus notabilis]
          Length = 622

 Score =  367 bits (942), Expect = 3e-99
 Identities = 170/266 (63%), Positives = 219/266 (82%), Gaps = 2/266 (0%)
 Frame = -3

Query: 792 PRLSLSWPQHFFLYHSINKPN--KISTTERDHTIDQNISRSNWQITKLSREGKISEARQL 619
           P+L  S      L H I   N  KI   ERD++++  ++RSNW +TKLS+ G+I +ARQ+
Sbjct: 6   PKLLFSIYNSRLLCHPIKHNNAPKILLLERDYSVNSGVARSNWWLTKLSKSGRIGDARQV 65

Query: 618 FDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKANAKKNVVTWTALIAGYIRSNQISEA 439
           FD+MP+RDV+TWTTVI+GY +CG+++EAR LFD+A+AKK+V+TWT ++ GY+R  +I EA
Sbjct: 66  FDEMPDRDVITWTTVITGYARCGMIEEARKLFDRADAKKDVITWTVMVNGYLRLRRIKEA 125

Query: 438 EKLFVQMPDKNVVSWNTMISGYAQNGRVDQAFELFEKMPDRNIVSWNTIITAFAQSGRID 259
           E+LF +MP KNVVSWNTMI GY QNGRV+ A  LF++MP+RN+VSWNTIITA AQSGR++
Sbjct: 126 ERLFFEMPVKNVVSWNTMIEGYFQNGRVNSALGLFDRMPERNVVSWNTIITALAQSGRME 185

Query: 258 EARRLFDQMPERDVISWTAMITGLSQNGRIDEARELFDKMPERNVVSWNAMITGYAQNLR 79
           EARRLFD MPERDVISWT M+ G S+NGRIDEAR +FD+MP +NVVSWNAMITGYAQN+R
Sbjct: 186 EARRLFDMMPERDVISWTTMVAGFSRNGRIDEARVVFDRMPVQNVVSWNAMITGYAQNMR 245

Query: 78  LDEALDIFERMPKRDVPSWNTMIPGF 1
           L+EA ++FERMP+R++ SWNTMI GF
Sbjct: 246 LNEAFELFERMPERNLSSWNTMITGF 271



 Score =  187 bits (476), Expect = 3e-45
 Identities = 103/272 (37%), Positives = 160/272 (58%), Gaps = 41/272 (15%)
 Frame = -3

Query: 693 QNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKA 514
           +N+   N  I    + G+++ A  LFD+MPER+VV+W T+I+   + G ++EAR LFD  
Sbjct: 135 KNVVSWNTMIEGYFQNGRVNSALGLFDRMPERNVVSWNTIITALAQSGRMEEARRLFDMM 194

Query: 513 NAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQNGRVDQAFELF 334
             +++V++WT ++AG+ R+ +I EA  +F +MP +NVVSWN MI+GYAQN R+++AFELF
Sbjct: 195 -PERDVISWTTMVAGFSRNGRIDEARVVFDRMPVQNVVSWNAMITGYAQNMRLNEAFELF 253

Query: 333 EKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPERDVISWTAMITGLSQNGRIDEARE 154
           E+MP+RN+ SWNT+IT F Q+G +  A  LF++MPE++ ISWT MI+G  Q+G+ +EA +
Sbjct: 254 ERMPERNLSSWNTMITGFIQNGELKRASNLFNKMPEKNSISWTTMISGYIQDGQNEEALK 313

Query: 153 LFDKMPERNV---------------------------------------VSWNAMITGYA 91
           +F KM    +                                       +  +A+I  Y+
Sbjct: 314 MFTKMVVDGIRPNEATFASVLSACSNLAGLGEGQQIHQMISKTVFQGSEILVSALINMYS 373

Query: 90  QNLRLDEALDIFERMPK--RDVPSWNTMIPGF 1
           +   L  A  +F+   K  RD+ SWN MI  +
Sbjct: 374 KCGELSTARKMFDDGSKSQRDLVSWNGMIAAY 405



 Score = 94.7 bits (234), Expect = 4e-17
 Identities = 65/251 (25%), Positives = 129/251 (51%), Gaps = 20/251 (7%)
 Frame = -3

Query: 696  DQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 517
            ++N+S  N  IT   + G++  A  LF++MPE++ ++WTT+ISGYI+ G  +EA  +F K
Sbjct: 258  ERNLSSWNTMITGFIQNGELKRASNLFNKMPEKNSISWTTMISGYIQDGQNEEALKMFTK 317

Query: 516  A---NAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNV-----VSWNTMISGYAQNG 361
                  + N  T+ ++++       + E +++  QM  K V     +  + +I+ Y++ G
Sbjct: 318  MVVDGIRPNEATFASVLSACSNLAGLGEGQQIH-QMISKTVFQGSEILVSALINMYSKCG 376

Query: 360  RVDQAFELFE--KMPDRNIVSWNTIITAFAQSGRIDEARRLFDQMP----ERDVISWTAM 199
             +  A ++F+      R++VSWN +I A+A  G   EA  L++++     + + +++  +
Sbjct: 377  ELSTARKMFDDGSKSQRDLVSWNGMIAAYAHHGCGSEAINLYNELQASGFKPNDVTYVGL 436

Query: 198  ITGLSQNGRIDEARELFDKMPERNVV-----SWNAMITGYAQNLRLDEALDIFERM-PKR 37
            ++  S  G +DE    FD++ +   V      +   +    +  +L +A D  ER+  K 
Sbjct: 437  LSACSHAGLVDEGLRYFDELVKSGTVRVKEDHYTCYVDLCGRAGKLKQAYDFIERLGTKP 496

Query: 36   DVPSWNTMIPG 4
                W T++ G
Sbjct: 497  STTVWGTLLAG 507


>ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Cucumis sativus]
          Length = 649

 Score =  357 bits (915), Expect = 4e-96
 Identities = 163/243 (67%), Positives = 207/243 (85%)
 Frame = -3

Query: 729 KISTTERDHTIDQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCG 550
           KIS+  RD + + N++RSNW IT+L +EGKI EARQ+F++MP+RDVV+WT VI+GYIKCG
Sbjct: 52  KISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCG 111

Query: 549 LVKEARFLFDKANAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYA 370
           +++EA+ LFD+ +A KNVVTWTAL++GY+R N+I EA +LF  MP KNV+SWNTMI GYA
Sbjct: 112 MIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYA 171

Query: 369 QNGRVDQAFELFEKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPERDVISWTAMITG 190
           + G +DQA +LFEKMP+RN+VSWNT+ITAF Q  R+DEA+ LF++MPERDVISWT M+ G
Sbjct: 172 RKGWIDQALDLFEKMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAG 231

Query: 189 LSQNGRIDEARELFDKMPERNVVSWNAMITGYAQNLRLDEALDIFERMPKRDVPSWNTMI 10
           LS+NGRID+AR LFDKMP RNVVSWN MI GYAQN+RLDEA  +FE+MP+R++ SWNTMI
Sbjct: 232 LSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMI 291

Query: 9   PGF 1
            GF
Sbjct: 292 TGF 294



 Score =  180 bits (456), Expect = 7e-43
 Identities = 102/273 (37%), Positives = 161/273 (58%), Gaps = 42/273 (15%)
 Frame = -3

Query: 693 QNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKA 514
           +N+   N  I   +R+G I +A  LF++MPER+VV+W TVI+ +++   V EA+ LF++ 
Sbjct: 158 KNVISWNTMIEGYARKGWIDQALDLFEKMPERNVVSWNTVITAFMQRRRVDEAQELFNRM 217

Query: 513 NAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQNGRVDQAFELF 334
             +++V++WT ++AG  ++ +I +A  LF +MP +NVVSWNTMI GYAQN R+D+AF+LF
Sbjct: 218 -PERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLF 276

Query: 333 EKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPERDVISWTAMITGLSQNGRIDEARE 154
           E+MP+R + SWNT+IT F Q+G+++ A   F +M  ++V++WTA+I+G  Q+GR +EA +
Sbjct: 277 EQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALK 336

Query: 153 LFDKMPERNVVSWN----------------------------------------AMITGY 94
           +F +M   N V  N                                        A+I  Y
Sbjct: 337 IFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMY 396

Query: 93  AQNLRLDEALDIFE--RMPKRDVPSWNTMIPGF 1
           ++   L+ A  IF+   +  RDV SWN MI  +
Sbjct: 397 SKCGELELARKIFDDGSIGHRDVVSWNGMIAAY 429



 Score = 90.5 bits (223), Expect = 8e-16
 Identities = 68/253 (26%), Positives = 124/253 (49%), Gaps = 22/253 (8%)
 Frame = -3

Query: 696  DQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 517
            ++ +S  N  IT   + GK+  A   F +M  ++VVTWT VISG+++ G  +EA  +F +
Sbjct: 281  ERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSE 340

Query: 516  A----NAKKNVVTWTAL------IAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQ 367
                 N K N  T+ ++      +A      QI +     V     +VVS   +I+ Y++
Sbjct: 341  MQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVS--ALINMYSK 398

Query: 366  NGRVDQAFELFE--KMPDRNIVSWNTIITAFAQSGRIDEARRLFDQMP----ERDVISWT 205
             G ++ A ++F+   +  R++VSWN +I A+A  G   +A  LFD+M       D +++ 
Sbjct: 399  CGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI 458

Query: 204  AMITGLSQNGRIDEARELFDKMPERNVVS-----WNAMITGYAQNLRLDEALDIFERMP- 43
            A+++  S  G +DE  +LF+ +     +      +  ++  + +  RL EA D  + +  
Sbjct: 459  ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEV 518

Query: 42   KRDVPSWNTMIPG 4
            K     W  ++ G
Sbjct: 519  KPSASVWAALLAG 531


>ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g35030, mitochondrial-like [Cucumis sativus]
          Length = 649

 Score =  354 bits (909), Expect = 2e-95
 Identities = 162/243 (66%), Positives = 206/243 (84%)
 Frame = -3

Query: 729 KISTTERDHTIDQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCG 550
           KIS+  RD + + N++RSNW IT+L +EGKI EARQ+F++MP+RDVV+WT VI+GYIKCG
Sbjct: 52  KISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCG 111

Query: 549 LVKEARFLFDKANAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYA 370
           +++EA+ LFD+ +A KNVVTWTAL++GY+R N+I EA +LF  MP KNV+SWNTMI GYA
Sbjct: 112 MIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYA 171

Query: 369 QNGRVDQAFELFEKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPERDVISWTAMITG 190
           + G +DQA +LFE MP+RN+VSWNT+ITAF Q  R+DEA+ LF++MPERDVISWT M+ G
Sbjct: 172 RKGWIDQALDLFEXMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAG 231

Query: 189 LSQNGRIDEARELFDKMPERNVVSWNAMITGYAQNLRLDEALDIFERMPKRDVPSWNTMI 10
           LS+NGRID+AR LFDKMP RNVVSWN MI GYAQN+RLDEA  +FE+MP+R++ SWNTMI
Sbjct: 232 LSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMI 291

Query: 9   PGF 1
            GF
Sbjct: 292 TGF 294



 Score =  179 bits (454), Expect = 1e-42
 Identities = 102/273 (37%), Positives = 160/273 (58%), Gaps = 42/273 (15%)
 Frame = -3

Query: 693 QNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKA 514
           +N+   N  I   +R+G I +A  LF+ MPER+VV+W TVI+ +++   V EA+ LF++ 
Sbjct: 158 KNVISWNTMIEGYARKGWIDQALDLFEXMPERNVVSWNTVITAFMQRRRVDEAQELFNRM 217

Query: 513 NAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQNGRVDQAFELF 334
             +++V++WT ++AG  ++ +I +A  LF +MP +NVVSWNTMI GYAQN R+D+AF+LF
Sbjct: 218 -PERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLF 276

Query: 333 EKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPERDVISWTAMITGLSQNGRIDEARE 154
           E+MP+R + SWNT+IT F Q+G+++ A   F +M  ++V++WTA+I+G  Q+GR +EA +
Sbjct: 277 EQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALK 336

Query: 153 LFDKMPERNVVSWN----------------------------------------AMITGY 94
           +F +M   N V  N                                        A+I  Y
Sbjct: 337 IFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMY 396

Query: 93  AQNLRLDEALDIFE--RMPKRDVPSWNTMIPGF 1
           ++   L+ A  IF+   +  RDV SWN MI  +
Sbjct: 397 SKCGELELARKIFDDGSIGHRDVVSWNGMIAAY 429



 Score = 90.5 bits (223), Expect = 8e-16
 Identities = 68/253 (26%), Positives = 124/253 (49%), Gaps = 22/253 (8%)
 Frame = -3

Query: 696  DQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 517
            ++ +S  N  IT   + GK+  A   F +M  ++VVTWT VISG+++ G  +EA  +F +
Sbjct: 281  ERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSE 340

Query: 516  A----NAKKNVVTWTAL------IAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQ 367
                 N K N  T+ ++      +A      QI +     V     +VVS   +I+ Y++
Sbjct: 341  MQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVS--ALINMYSK 398

Query: 366  NGRVDQAFELFE--KMPDRNIVSWNTIITAFAQSGRIDEARRLFDQMP----ERDVISWT 205
             G ++ A ++F+   +  R++VSWN +I A+A  G   +A  LFD+M       D +++ 
Sbjct: 399  CGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI 458

Query: 204  AMITGLSQNGRIDEARELFDKMPERNVVS-----WNAMITGYAQNLRLDEALDIFERMP- 43
            A+++  S  G +DE  +LF+ +     +      +  ++  + +  RL EA D  + +  
Sbjct: 459  ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEV 518

Query: 42   KRDVPSWNTMIPG 4
            K     W  ++ G
Sbjct: 519  KPSASVWAALLAG 531


>ref|XP_007028547.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           isoform 1 [Theobroma cacao]
           gi|590635100|ref|XP_007028548.1| Pentatricopeptide
           repeat (PPR) superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508717152|gb|EOY09049.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508717153|gb|EOY09050.1| Pentatricopeptide repeat
           (PPR) superfamily protein, putative isoform 1 [Theobroma
           cacao]
          Length = 631

 Score =  354 bits (908), Expect = 3e-95
 Identities = 162/252 (64%), Positives = 216/252 (85%), Gaps = 2/252 (0%)
 Frame = -3

Query: 750 HSINKPNKISTTERDHTIDQNISRSNWQITKLSREGKISEARQLFDQMPERD--VVTWTT 577
           HS+     I +   D++ + ++++SNW ITKLS EGKIS+ R+LFDQMP+RD  V+TWT 
Sbjct: 27  HSVKSKTTIPSI--DYSANSSVAQSNWLITKLSTEGKISQVRKLFDQMPDRDKDVITWTA 84

Query: 576 VISGYIKCGLVKEARFLFDKANAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVS 397
           +ISGYIK GL++EAR LFD+ ++KKNVVTWTA+++GY+RSN+I EA++LF +MP KNVVS
Sbjct: 85  LISGYIKLGLIEEARRLFDRVDSKKNVVTWTAMLSGYMRSNRILEAKRLFDEMPVKNVVS 144

Query: 396 WNTMISGYAQNGRVDQAFELFEKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPERDV 217
           WNTM+ GY QNG V +AFELF++MP+RN+VSWNT++TA AQ GR+++AR LFD+MP+RDV
Sbjct: 145 WNTMVDGYVQNGMVGKAFELFQEMPERNVVSWNTMLTALAQCGRVEDARGLFDRMPKRDV 204

Query: 216 ISWTAMITGLSQNGRIDEARELFDKMPERNVVSWNAMITGYAQNLRLDEALDIFERMPKR 37
           ISWTAM+ GL++NG+IDEAR +FD+MPERNVVSWNAMITGY+QN++LDEA ++FERMP+R
Sbjct: 205 ISWTAMVAGLAKNGKIDEARRVFDRMPERNVVSWNAMITGYSQNMKLDEAFELFERMPER 264

Query: 36  DVPSWNTMIPGF 1
           ++ SWN MI GF
Sbjct: 265 NLSSWNAMITGF 276



 Score =  195 bits (496), Expect = 2e-47
 Identities = 91/211 (43%), Positives = 148/211 (70%), Gaps = 2/211 (0%)
 Frame = -3

Query: 738 KPNKISTTER--DHTIDQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISG 565
           + N+I   +R  D    +N+   N  +    + G + +A +LF +MPER+VV+W T+++ 
Sbjct: 123 RSNRILEAKRLFDEMPVKNVVSWNTMVDGYVQNGMVGKAFELFQEMPERNVVSWNTMLTA 182

Query: 564 YIKCGLVKEARFLFDKANAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTM 385
             +CG V++AR LFD+   K++V++WTA++AG  ++ +I EA ++F +MP++NVVSWN M
Sbjct: 183 LAQCGRVEDARGLFDRM-PKRDVISWTAMVAGLAKNGKIDEARRVFDRMPERNVVSWNAM 241

Query: 384 ISGYAQNGRVDQAFELFEKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPERDVISWT 205
           I+GY+QN ++D+AFELFE+MP+RN+ SWN +IT F Q+G +  A +LFD++P ++V+SWT
Sbjct: 242 ITGYSQNMKLDEAFELFERMPERNLSSWNAMITGFIQNGELKRAEKLFDKVPRKNVVSWT 301

Query: 204 AMITGLSQNGRIDEARELFDKMPERNVVSWN 112
            MITG  Q+ + +EA ++F KM   + V  N
Sbjct: 302 TMITGYVQDEQSEEALKIFSKMMAEDGVKPN 332



 Score =  169 bits (428), Expect = 1e-39
 Identities = 91/259 (35%), Positives = 154/259 (59%), Gaps = 42/259 (16%)
 Frame = -3

Query: 696 DQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 517
           ++N+   N  +T L++ G++ +AR LFD+MP+RDV++WT +++G  K G + EAR +FD+
Sbjct: 170 ERNVVSWNTMLTALAQCGRVEDARGLFDRMPKRDVISWTAMVAGLAKNGKIDEARRVFDR 229

Query: 516 ANAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQNGRVDQAFEL 337
              ++NVV+W A+I GY ++ ++ EA +LF +MP++N+ SWN MI+G+ QNG + +A +L
Sbjct: 230 M-PERNVVSWNAMITGYSQNMKLDEAFELFERMPERNLSSWNAMITGFIQNGELKRAEKL 288

Query: 336 FEKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPERD-----------VISWTAMITG 190
           F+K+P +N+VSW T+IT + Q  + +EA ++F +M   D           V+S  + + G
Sbjct: 289 FDKVPRKNVVSWTTMITGYVQDEQSEEALKIFSKMMAEDGVKPNEGTFVSVLSACSDLAG 348

Query: 189 L-----------------------------SQNGRIDEARELFDK--MPERNVVSWNAMI 103
           L                             S+ G ++ AR +FD   + +R+VVSWN MI
Sbjct: 349 LFEGQQVHQTLAKTIYQCSEIVVSAIINMYSKCGELNAARRMFDDGLISQRDVVSWNGMI 408

Query: 102 TGYAQNLRLDEALDIFERM 46
             YA +    EA+ +F++M
Sbjct: 409 AAYAHHGCGGEAISLFKKM 427



 Score = 87.0 bits (214), Expect = 8e-15
 Identities = 62/251 (24%), Positives = 119/251 (47%), Gaps = 51/251 (20%)
 Frame = -3

Query: 696  DQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 517
            ++N+S  N  IT   + G++  A +LFD++P ++VV+WTT+I+GY++    +EA  +F K
Sbjct: 263  ERNLSSWNAMITGFIQNGELKRAEKLFDKVPRKNVVSWTTMITGYVQDEQSEEALKIFSK 322

Query: 516  ANAKKNV---------------------------------------VTWTALIAGYIRSN 454
              A+  V                                       +  +A+I  Y +  
Sbjct: 323  MMAEDGVKPNEGTFVSVLSACSDLAGLFEGQQVHQTLAKTIYQCSEIVVSAIINMYSKCG 382

Query: 453  QISEAEKLFVQ--MPDKNVVSWNTMISGYAQNGRVDQAFELFEKMP----DRNIVSWNTI 292
            +++ A ++F    +  ++VVSWN MI+ YA +G   +A  LF+KM       N  ++  +
Sbjct: 383  ELNAARRMFDDGLISQRDVVSWNGMIAAYAHHGCGGEAISLFKKMSGFGFKPNGATYVAL 442

Query: 291  ITAFAQSGRIDEARRLFDQMPERDVIS-----WTAMITGLSQNGRIDEARELFDKMPERN 127
            ++A + SG +++  R FD++     I      +  ++   S+ G++ EA E   ++  + 
Sbjct: 443  LSACSHSGMVEDGLRYFDELVRDKSIQVKEDHYACLVDLCSRAGKLKEAFEFIMRLGTKP 502

Query: 126  VVS-WNAMITG 97
              S W A++ G
Sbjct: 503  SASIWEALLAG 513


>emb|CBI30094.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  353 bits (906), Expect = 5e-95
 Identities = 179/293 (61%), Positives = 223/293 (76%), Gaps = 3/293 (1%)
 Frame = -3

Query: 873 LTLAR-ASVSIPTKILPLSIFQALLPFLPRLSLSWPQHFFLYHSIN--KPNKISTTERDH 703
           L L+R A V   T++  L   Q  +P L  L L     F+LYHSIN  +  KIS   +D 
Sbjct: 2   LALSRVADVGNFTRMPFLICVQITIPALINLKLLRIPGFYLYHSINDYRTAKISIPRKDF 61

Query: 702 TIDQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLF 523
           T+D N++R NW IT LS++G+I EAR+LFD+M E DV+TWTTVISGYIKCG+++EAR LF
Sbjct: 62  TVDGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLF 121

Query: 522 DKANAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQNGRVDQAF 343
           D+ +AKKNVVTWTA++ GYIRSN+IS+AEKLF +MP+KNVVSWNTMI GYAQNGR+D A 
Sbjct: 122 DRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAM 181

Query: 342 ELFEKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPERDVISWTAMITGLSQNGRIDE 163
            LFEKMP+RN+VSWNT+++  AQ GRI+EARRLFD+MPERDVISWTAMI GL     +DE
Sbjct: 182 YLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGL-----LDE 236

Query: 162 ARELFDKMPERNVVSWNAMITGYAQNLRLDEALDIFERMPKRDVPSWNTMIPG 4
           A +LF++MPER++ SWN MITG  QN  L  A  +F  MPK++V SW TMI G
Sbjct: 237 ALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITG 289



 Score =  109 bits (272), Expect = 2e-21
 Identities = 52/108 (48%), Positives = 77/108 (71%), Gaps = 1/108 (0%)
 Frame = -3

Query: 321 DRNIVSWNTIITAFAQSGRIDEARRLFDQMPERDVISWTAMITGLSQNGRIDEARELFDK 142
           D N+   N +IT  ++ GRI EARRLFD+M E DVI+WT +I+G  + G I+EAR LFD+
Sbjct: 64  DGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDR 123

Query: 141 MP-ERNVVSWNAMITGYAQNLRLDEALDIFERMPKRDVPSWNTMIPGF 1
           +  ++NVV+W AM+ GY ++ ++ +A  +F  MP ++V SWNTMI G+
Sbjct: 124 VDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGY 171



 Score = 87.8 bits (216), Expect = 5e-15
 Identities = 67/253 (26%), Positives = 129/253 (50%), Gaps = 22/253 (8%)
 Frame = -3

Query: 696 DQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 517
           ++++   N  IT L + G +  AR+LF++MP+++V++WTT+I+G ++ G  +EA  +F +
Sbjct: 246 ERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSR 305

Query: 516 A----NAKKNVVTWTAL------IAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQ 367
                 AK N  T+ ++      +AG     Q+ +     V      VVS   +I+ Y++
Sbjct: 306 MLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVS--ALINMYSK 363

Query: 366 NGRVDQAFELFE--KMPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPER----DVISWT 205
            G +  A ++F+      R++VSWN II A+A  G   EA   F +M +     D +++ 
Sbjct: 364 CGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYV 423

Query: 204 AMITGLSQNGRIDEARELFDKM-PERNVV----SWNAMITGYAQNLRLDEALDIFERM-P 43
            +++  S  G ++E  + FD++  +R+++     +  ++    +  RL EA    ER+  
Sbjct: 424 GLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLET 483

Query: 42  KRDVPSWNTMIPG 4
           K     W  ++ G
Sbjct: 484 KPSARVWGALLAG 496


>ref|XP_004498123.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g35030, mitochondrial-like [Cicer arietinum]
          Length = 665

 Score =  343 bits (880), Expect = 5e-92
 Identities = 155/234 (66%), Positives = 200/234 (85%)
 Frame = -3

Query: 702 TIDQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLF 523
           +I   + R N+ I+ L ++GKI EAR++FD+M ERD+  WTT+ISGYIKCG++KEAR LF
Sbjct: 44  SISLEMKRCNFFISSLCKQGKIDEARKVFDEMSERDICLWTTMISGYIKCGMIKEARKLF 103

Query: 522 DKANAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQNGRVDQAF 343
           D+++A+KNV+ WTA+++GY++ N+I EAE+LF +MP +NVVSWNTMI GYA+NGR  +A 
Sbjct: 104 DRSDAEKNVIVWTAMVSGYVKLNRIEEAERLFYEMPVRNVVSWNTMIDGYARNGRTQEAL 163

Query: 342 ELFEKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPERDVISWTAMITGLSQNGRIDE 163
           +LF +MP+RN+VSWNTIITA A SGRID+A+ +F +M ERDV+SWT M+ GLS+NGRID+
Sbjct: 164 DLFRRMPERNVVSWNTIITALAHSGRIDDAQGIFSKMQERDVVSWTTMVAGLSKNGRIDD 223

Query: 162 ARELFDKMPERNVVSWNAMITGYAQNLRLDEALDIFERMPKRDVPSWNTMIPGF 1
           ARELFD+MP RNVVSWNAMITGYAQN RLDEAL +FERMP+RD+PSWNTMI GF
Sbjct: 224 ARELFDRMPVRNVVSWNAMITGYAQNGRLDEALKLFERMPERDMPSWNTMITGF 277



 Score = 97.8 bits (242), Expect = 5e-18
 Identities = 66/246 (26%), Positives = 126/246 (51%), Gaps = 22/246 (8%)
 Frame = -3

Query: 675  NWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKANAKKNV 496
            N  IT   + G ++ A +LFD+MP+++V+TWT++++GY++ GL +EA  +F+K  A   +
Sbjct: 271  NTMITGFIQNGDLNRAEKLFDEMPQKNVITWTSMMTGYVQHGLSEEALKIFNKMQANDGL 330

Query: 495  VTWTAL----------IAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQNGRVDQA 346
               T            +AG I   QI +     V   + +VVS   +I+ Y++ G +  A
Sbjct: 331  KPTTGTFVTVLGACSDLAGLIEGQQIHQMISKTVFQENNHVVS--ALINMYSKCGELQAA 388

Query: 345  FELFEK--MPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPE----RDVISWTAMITGLS 184
             ++F+       +++SWN +I A+A  G   EA  L+++M E     + +++  ++T  S
Sbjct: 389  RKMFDDGLSGQMDLISWNGMIAAYAHHGSGTEAISLYNKMVELGFQANDVTFVGLLTACS 448

Query: 183  QNGRIDEARELFDKMPERNVVS-----WNAMITGYAQNLRLDEALDIFERMPK-RDVPSW 22
              G ++E  + FD++ E   +      +  +I    +  RL EA ++ E + K   +  W
Sbjct: 449  HAGLVEEGLKYFDELLENRYIQVREDHYTCLIDLCGRAGRLKEAFNVIEGLGKDASLTIW 508

Query: 21   NTMIPG 4
              ++ G
Sbjct: 509  AALLAG 514


>ref|XP_006587960.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like isoform X2 [Glycine max]
           gi|571479769|ref|XP_006587961.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like isoform X3 [Glycine max]
           gi|571479771|ref|XP_003533693.2| PREDICTED:
           pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like isoform X1 [Glycine max]
          Length = 618

 Score =  337 bits (865), Expect = 3e-90
 Identities = 153/243 (62%), Positives = 203/243 (83%)
 Frame = -3

Query: 729 KISTTERDHTIDQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCG 550
           ++++T   HT    + R N  I++L REG+I  AR++F++MPERD+  WTT+I+GY+KCG
Sbjct: 27  RLASTSNLHT---EMKRCNLFISRLCREGEIDYARKVFEEMPERDIGLWTTMITGYLKCG 83

Query: 549 LVKEARFLFDKANAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYA 370
           +++EAR LFD+ +AKKNVVTWTA++ GYI+ NQ+ EAE+LF +MP +NVVSWNTM+ GYA
Sbjct: 84  MIREARKLFDRWDAKKNVVTWTAMVNGYIKFNQVKEAERLFYEMPLRNVVSWNTMVDGYA 143

Query: 369 QNGRVDQAFELFEKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPERDVISWTAMITG 190
           +NG   QA +LF +MP+RN+VSWNTIITA  Q GRI++A+RLFDQM +RDV+SWT M+ G
Sbjct: 144 RNGLTQQALDLFRRMPERNVVSWNTIITALVQCGRIEDAQRLFDQMKDRDVVSWTTMVAG 203

Query: 189 LSQNGRIDEARELFDKMPERNVVSWNAMITGYAQNLRLDEALDIFERMPKRDVPSWNTMI 10
           L++NGR+++AR LFD+MP RNVVSWNAMITGYAQN RLDEAL +F+RMP+RD+PSWNTMI
Sbjct: 204 LAKNGRVEDARALFDQMPVRNVVSWNAMITGYAQNRRLDEALQLFQRMPERDMPSWNTMI 263

Query: 9   PGF 1
            GF
Sbjct: 264 TGF 266



 Score =  186 bits (473), Expect = 8e-45
 Identities = 86/194 (44%), Positives = 137/194 (70%)
 Frame = -3

Query: 693 QNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKA 514
           +N+   N  +   +R G   +A  LF +MPER+VV+W T+I+  ++CG +++A+ LFD+ 
Sbjct: 130 RNVVSWNTMVDGYARNGLTQQALDLFRRMPERNVVSWNTIITALVQCGRIEDAQRLFDQM 189

Query: 513 NAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQNGRVDQAFELF 334
              ++VV+WT ++AG  ++ ++ +A  LF QMP +NVVSWN MI+GYAQN R+D+A +LF
Sbjct: 190 K-DRDVVSWTTMVAGLAKNGRVEDARALFDQMPVRNVVSWNAMITGYAQNRRLDEALQLF 248

Query: 333 EKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPERDVISWTAMITGLSQNGRIDEARE 154
           ++MP+R++ SWNT+IT F Q+G ++ A +LF +M E++VI+WTAM+TG  Q+G  +EA  
Sbjct: 249 QRMPERDMPSWNTMITGFIQNGELNRAEKLFGEMQEKNVITWTAMMTGYVQHGLSEEALR 308

Query: 153 LFDKMPERNVVSWN 112
           +F KM   N +  N
Sbjct: 309 VFIKMLATNELKPN 322



 Score =  135 bits (339), Expect = 3e-29
 Identities = 83/264 (31%), Positives = 144/264 (54%), Gaps = 42/264 (15%)
 Frame = -3

Query: 696 DQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 517
           ++N+   N  IT L + G+I +A++LFDQM +RDVV+WTT+++G  K G V++AR LFD+
Sbjct: 160 ERNVVSWNTIITALVQCGRIEDAQRLFDQMKDRDVVSWTTMVAGLAKNGRVEDARALFDQ 219

Query: 516 ANAKKNVVTWTALIAGY-------------------------------IRSNQISEAEKL 430
              + NVV+W A+I GY                               I++ +++ AEKL
Sbjct: 220 MPVR-NVVSWNAMITGYAQNRRLDEALQLFQRMPERDMPSWNTMITGFIQNGELNRAEKL 278

Query: 429 FVQMPDKNVVSWNTMISGYAQNGRVDQAFELFEKMPDRNIVSWN-----TIITAFAQSGR 265
           F +M +KNV++W  M++GY Q+G  ++A  +F KM   N +  N     T++ A +    
Sbjct: 279 FGEMQEKNVITWTAMMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLGACSDLAG 338

Query: 264 IDEARRLFDQMPERDVISWTAMITGL----SQNGRIDEARELFDK--MPERNVVSWNAMI 103
           + E +++   + +      T +++ L    S+ G +  AR++FD   + +R+++SWN MI
Sbjct: 339 LTEGQQIHQMISKTVFQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDLISWNGMI 398

Query: 102 TGYAQNLRLDEALDIFERMPKRDV 31
             YA +    EA+++F  M +  V
Sbjct: 399 AAYAHHGYGKEAINLFNEMQELGV 422


>ref|XP_003589755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355478803|gb|AES60006.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 891

 Score =  335 bits (860), Expect = 1e-89
 Identities = 158/265 (59%), Positives = 209/265 (78%)
 Frame = -3

Query: 795 LPRLSLSWPQHFFLYHSINKPNKISTTERDHTIDQNISRSNWQITKLSREGKISEARQLF 616
           LP+L ++   H +     N   + S+T    T+   + R N+ I+KL REGK++EAR++F
Sbjct: 15  LPKLKIT---HCYYPFQNNLRIRSSSTA---TLTSEMKRCNYFISKLCREGKVNEARKVF 68

Query: 615 DQMPERDVVTWTTVISGYIKCGLVKEARFLFDKANAKKNVVTWTALIAGYIRSNQISEAE 436
           D+M +RD   WTT+ISGYIKCGL+ EAR LFD+ +A+K+V+ WTA+++GYI+ N+I EAE
Sbjct: 69  DEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPDAQKSVIVWTAMVSGYIKMNRIEEAE 128

Query: 435 KLFVQMPDKNVVSWNTMISGYAQNGRVDQAFELFEKMPDRNIVSWNTIITAFAQSGRIDE 256
           +LF +MP +NVVSWNTMI GYA+NGR  +A +LF +MP+RN+VSWNT++TA A  GRID+
Sbjct: 129 RLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPERNVVSWNTVMTALAHCGRIDD 188

Query: 255 ARRLFDQMPERDVISWTAMITGLSQNGRIDEARELFDKMPERNVVSWNAMITGYAQNLRL 76
           A RLF++M ERDV+SWT M+ GLS+NGR+D ARE+FDKMP RNVVSWNAMI GYAQN R 
Sbjct: 189 AERLFNEMRERDVVSWTTMVAGLSKNGRVDAAREVFDKMPIRNVVSWNAMIAGYAQNGRF 248

Query: 75  DEALDIFERMPKRDVPSWNTMIPGF 1
           DEAL +FERMP+RD+PSWNTM+ GF
Sbjct: 249 DEALKLFERMPERDMPSWNTMVTGF 273



 Score =  102 bits (254), Expect = 2e-19
 Identities = 77/282 (27%), Positives = 135/282 (47%), Gaps = 52/282 (18%)
 Frame = -3

Query: 693  QNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKA 514
            +N+   N  I   ++ G+  EA +LF++MPERD+ +W T+++G+I+ G +  A  LF  A
Sbjct: 230  RNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEQLF-HA 288

Query: 513  NAKKNVVTWTALIAGYIRSNQISEAEKLF------------------------------- 427
              +KNV+TWTA++ GY++     EA KLF                               
Sbjct: 289  MPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPE 348

Query: 426  ----VQMPDKNVVSWNT-----MISGYAQNGRVDQAFELFEK--MPDRNIVSWNTIITAF 280
                 QM  K V   +T     +I+ Y++ G    A ++F+       ++++WN +I A+
Sbjct: 349  GQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAY 408

Query: 279  AQSGRIDEARRLFDQMPE----RDVISWTAMITGLSQNGRIDEARELFDKMPERNVVS-- 118
            A  G  +EA  LF++M E     + +++  ++T  S  G  DE  + FD++ +   +   
Sbjct: 409  AHHGYGNEAINLFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKNRYIQVR 468

Query: 117  ---WNAMITGYAQNLRLDEALDIFERMPKR-DVPSWNTMIPG 4
               +  +I    +  RLDEAL+I E + K   +  W  ++ G
Sbjct: 469  EDHYTCLIDLCGRAGRLDEALNIIEGLGKEVSLSLWGALLAG 510



 Score = 77.4 bits (189), Expect = 7e-12
 Identities = 69/298 (23%), Positives = 119/298 (39%), Gaps = 85/298 (28%)
 Frame = -3

Query: 675  NWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKANAKKNV 496
            N  +T   + G ++ A QLF  MP+++V+TWT +++GY++ GL +EA  LF+K  A   +
Sbjct: 267  NTMVTGFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGL 326

Query: 495  VTWT---------------------------------------ALIAGYIRSNQISEAEK 433
               T                                       ALI  Y +      A+K
Sbjct: 327  KPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKK 386

Query: 432  LFVQ--MPDKNVVSWNTMISGYAQNGRVDQAFELFEKMPD----RNIVSWNTIITAFAQS 271
            +F        ++++WN MI+ YA +G  ++A  LF KM +     N V++  ++TA + +
Sbjct: 387  MFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVGLLTACSHA 446

Query: 270  GRIDEARRLFDQMPERDVIS-------------------------------------WTA 202
            G  DE  + FD++ +   I                                      W A
Sbjct: 447  GLFDEGFKYFDELLKNRYIQVREDHYTCLIDLCGRAGRLDEALNIIEGLGKEVSLSLWGA 506

Query: 201  MITGLSQNGRIDEARELFD---KMPERNVVSWNAMITGYAQNLRLDEALDIFERMPKR 37
            ++ G S +G  D  + + D   KM   N  ++      YA     +EA ++  +M K+
Sbjct: 507  LLAGCSVHGNADIGKLVADKVLKMEPENADTYLLASNMYASVGMREEAANVRMKMKKK 564


>ref|XP_006340092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Solanum tuberosum]
          Length = 641

 Score =  333 bits (853), Expect = 7e-89
 Identities = 159/252 (63%), Positives = 207/252 (82%), Gaps = 2/252 (0%)
 Frame = -3

Query: 750 HSINKPNK-ISTTER-DHTIDQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTT 577
           H IN+P K  S   R D+T +Q++SRSN  I+KLS+EG++ EAR+LFD+M E DVV+WT 
Sbjct: 29  HFINQPIKHYSLLPRVDYTCNQDVSRSNRIISKLSKEGQVDEARKLFDKMSEPDVVSWTA 88

Query: 576 VISGYIKCGLVKEARFLFDKANAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVS 397
           +ISGYI+CG + +AR LFD+ +AK++VVTWTA++A Y R+N+I EAE LF +MP+KNVVS
Sbjct: 89  MISGYIRCGKIDKARELFDRTDAKRDVVTWTAMLAAYARTNRILEAEMLFNEMPEKNVVS 148

Query: 396 WNTMISGYAQNGRVDQAFELFEKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPERDV 217
           WN++I GYA+NGR+D+  ELF KM +RN+VSWN +I   A++GRI+EAR LFDQMPE++V
Sbjct: 149 WNSLIDGYARNGRIDKGLELFWKMRERNVVSWNMVIAGLARNGRINEARVLFDQMPEKNV 208

Query: 216 ISWTAMITGLSQNGRIDEARELFDKMPERNVVSWNAMITGYAQNLRLDEALDIFERMPKR 37
           +SWT MI GLS+NGR+DEAR LFD+ PERNVVSWNAMITGY QN +LDEA ++FE MP++
Sbjct: 209 VSWTTMIAGLSRNGRVDEARTLFDRTPERNVVSWNAMITGYTQNSKLDEAFELFEMMPEK 268

Query: 36  DVPSWNTMIPGF 1
            V SWNTMI GF
Sbjct: 269 IVSSWNTMIMGF 280



 Score =  181 bits (460), Expect = 2e-43
 Identities = 89/186 (47%), Positives = 127/186 (68%)
 Frame = -3

Query: 696 DQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 517
           ++N+   N  I   +R G+I +  +LF +M ER+VV+W  VI+G  + G + EAR LFD+
Sbjct: 143 EKNVVSWNSLIDGYARNGRIDKGLELFWKMRERNVVSWNMVIAGLARNGRINEARVLFDQ 202

Query: 516 ANAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQNGRVDQAFEL 337
              +KNVV+WT +IAG  R+ ++ EA  LF + P++NVVSWN MI+GY QN ++D+AFEL
Sbjct: 203 M-PEKNVVSWTTMIAGLSRNGRVDEARTLFDRTPERNVVSWNAMITGYTQNSKLDEAFEL 261

Query: 336 FEKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPERDVISWTAMITGLSQNGRIDEAR 157
           FE MP++ + SWNT+I  F Q+G +  AR LFD+M +RDV+SW+ MI G  Q GR +EA 
Sbjct: 262 FEMMPEKIVSSWNTMIMGFIQNGELGRARILFDKMRQRDVVSWSTMINGYMQEGRSEEAL 321

Query: 156 ELFDKM 139
             F  M
Sbjct: 322 RNFCDM 327



 Score =  103 bits (257), Expect = 9e-20
 Identities = 73/287 (25%), Positives = 137/287 (47%), Gaps = 52/287 (18%)
 Frame = -3

Query: 708  DHTIDQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARF 529
            D T ++N+   N  IT  ++  K+ EA +LF+ MPE+ V +W T+I G+I+ G +  AR 
Sbjct: 232  DRTPERNVVSWNAMITGYTQNSKLDEAFELFEMMPEKIVSSWNTMIMGFIQNGELGRARI 291

Query: 528  LFDKANAKKNVVTWTALIAGYIRSNQISEAEKLFVQMP---------------------- 415
            LFDK   +++VV+W+ +I GY++  +  EA + F  M                       
Sbjct: 292  LFDKMR-QRDVVSWSTMINGYMQEGRSEEALRNFCDMQMDVWVKPNEGTFVSVLGACSDL 350

Query: 414  ------------------DKNVVSWNTMISGYAQNGRVDQAFELFEK--MPDRNIVSWNT 295
                               KN V  + +I+ Y++ G V  A ++F+      R+++SWN 
Sbjct: 351  AGLSEGIQIHQVINKTIYQKNEVVISALINMYSKCGDVATARKIFDDGLRGQRDLISWNV 410

Query: 294  IITAFAQSGRIDEARRLFDQMPE----RDVISWTAMITGLSQNGRIDEARELFDKMPERN 127
            +I A+   G   +A  LF +M +     + +++  ++   S +G ++E  + FD++   +
Sbjct: 411  MIAAYTHHGFGRDAINLFKEMLQLGFKPNDVTYVGLLAACSHSGLVEEGLKYFDELCRDD 470

Query: 126  VVS-----WNAMITGYAQNLRLDEALDIFERMPKRDVP-SWNTMIPG 4
             +      +  ++    +  RL EALD+ ER+P+ +    W  ++ G
Sbjct: 471  SIKLREDHYTCLVDLCGRAGRLKEALDVIERLPRTESAFIWGALLSG 517


>ref|XP_004237347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Solanum lycopersicum]
          Length = 624

 Score =  330 bits (846), Expect = 4e-88
 Identities = 153/236 (64%), Positives = 198/236 (83%)
 Frame = -3

Query: 708 DHTIDQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARF 529
           D+T +Q++SRSN  I+KLS+EG++ EAR+LFD+M E DVV+WT +ISGYI+CG + +AR 
Sbjct: 45  DYTCNQDVSRSNRIISKLSKEGQVDEARKLFDKMSEPDVVSWTAMISGYIRCGKIDKARE 104

Query: 528 LFDKANAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQNGRVDQ 349
           LFD+ +AK++VVTWTA++A Y R N+I EAE LF +MP+KNVVSWN++I GYA+NGR+D+
Sbjct: 105 LFDRTDAKRDVVTWTAMVAAYARMNRILEAEMLFNEMPEKNVVSWNSLIDGYARNGRIDK 164

Query: 348 AFELFEKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPERDVISWTAMITGLSQNGRI 169
             ELF KM +RN+VSWN +I   AQ+GRI+EAR LFDQMPE++V+SWT MI GLS+NGR+
Sbjct: 165 GLELFWKMGERNVVSWNMVIAGLAQNGRINEARVLFDQMPEKNVVSWTTMIAGLSRNGRV 224

Query: 168 DEARELFDKMPERNVVSWNAMITGYAQNLRLDEALDIFERMPKRDVPSWNTMIPGF 1
           +EAR LFD+ PERNVVSWNAMITGY QN RLDEA ++FE MP++ V SWNTMI GF
Sbjct: 225 EEARTLFDRTPERNVVSWNAMITGYTQNSRLDEAFELFEIMPEKIVSSWNTMIMGF 280



 Score =  177 bits (450), Expect = 4e-42
 Identities = 104/274 (37%), Positives = 152/274 (55%), Gaps = 42/274 (15%)
 Frame = -3

Query: 696 DQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 517
           ++N+   N  I   +R G+I +  +LF +M ER+VV+W  VI+G  + G + EAR LFD+
Sbjct: 143 EKNVVSWNSLIDGYARNGRIDKGLELFWKMGERNVVSWNMVIAGLAQNGRINEARVLFDQ 202

Query: 516 ANAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQNGRVDQAFEL 337
              +KNVV+WT +IAG  R+ ++ EA  LF + P++NVVSWN MI+GY QN R+D+AFEL
Sbjct: 203 M-PEKNVVSWTTMIAGLSRNGRVEEARTLFDRTPERNVVSWNAMITGYTQNSRLDEAFEL 261

Query: 336 FEKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPERDVISWTAMITGLSQNGRIDEAR 157
           FE MP++ + SWNT+I  F Q+G +  AR LFD+M +RDV+SW+ MI G    GR +EA 
Sbjct: 262 FEIMPEKIVSSWNTMIMGFIQNGELGRARILFDKMRQRDVVSWSTMINGYMLKGRSEEAL 321

Query: 156 ELFDKMP----------------------------------------ERNVVSWNAMITG 97
             F +M                                         + N V  +A+I  
Sbjct: 322 RNFCEMQMDVLVKPNEGTFVSVLGACSDLAGLSEGMQIHQVINKTTYQMNEVVISALINM 381

Query: 96  YAQNLRLDEALDIFER--MPKRDVPSWNTMIPGF 1
           Y++   +  A  IF+     +RD+ SWN MI  +
Sbjct: 382 YSKCGDVATARKIFDDGLRGQRDLISWNVMIAAY 415



 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 65/242 (26%), Positives = 126/242 (52%), Gaps = 17/242 (7%)
 Frame = -3

Query: 708 DHTIDQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARF 529
           D T ++N+   N  IT  ++  ++ EA +LF+ MPE+ V +W T+I G+I+ G +  AR 
Sbjct: 232 DRTPERNVVSWNAMITGYTQNSRLDEAFELFEIMPEKIVSSWNTMIMGFIQNGELGRARI 291

Query: 528 LFDKANAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWN-----------TMI 382
           LFDK   +++VV+W+ +I GY+   +  EA + F +M    +V  N           + +
Sbjct: 292 LFDKMR-QRDVVSWSTMINGYMLKGRSEEALRNFCEMQMDVLVKPNEGTFVSVLGACSDL 350

Query: 381 SGYAQNGRVDQAFELFEKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQ--MPERDVISW 208
           +G ++  ++ Q         +  ++S   +I  +++ G +  AR++FD     +RD+ISW
Sbjct: 351 AGLSEGMQIHQVINKTTYQMNEVVIS--ALINMYSKCGDVATARKIFDDGLRGQRDLISW 408

Query: 207 TAMITGLSQNGRIDEARELFDKMPE----RNVVSWNAMITGYAQNLRLDEALDIFERMPK 40
             MI   + +G   +A  LF +M +     N V++  ++   + +  ++E L  F+ + +
Sbjct: 409 NVMIAAYTHHGFGRDAINLFKEMLQLGFKPNDVTYVGLLAACSHSGLVEEGLKYFDELCR 468

Query: 39  RD 34
            D
Sbjct: 469 DD 470


>ref|XP_007161435.1| hypothetical protein PHAVU_001G068400g [Phaseolus vulgaris]
           gi|561034899|gb|ESW33429.1| hypothetical protein
           PHAVU_001G068400g [Phaseolus vulgaris]
          Length = 616

 Score =  329 bits (843), Expect = 1e-87
 Identities = 148/243 (60%), Positives = 200/243 (82%)
 Frame = -3

Query: 729 KISTTERDHTIDQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCG 550
           ++++T  +H     + R N  I +L  +GKI +AR++FD+M +RD+  WTT+I+GY+KCG
Sbjct: 24  RLTSTVSNHP---EMKRCNLLIFRLCEDGKIDDARKVFDKMLDRDIGLWTTMINGYLKCG 80

Query: 549 LVKEARFLFDKANAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYA 370
           +++EAR LFD+ +AKKNVVTWTA+I GYIR NQ+ EAE+LF +MP +NVVSWNTM+ GYA
Sbjct: 81  MIREARKLFDRLDAKKNVVTWTAMIKGYIRLNQVKEAERLFYEMPLRNVVSWNTMVDGYA 140

Query: 369 QNGRVDQAFELFEKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPERDVISWTAMITG 190
           +NG   QA +LF +MP+RN+VSWNTIIT   Q G++D+A+RLFDQM ERDV+SWT M+ G
Sbjct: 141 RNGLTQQALDLFRRMPERNVVSWNTIITTLVQCGKVDDAQRLFDQMKERDVVSWTTMVAG 200

Query: 189 LSQNGRIDEARELFDKMPERNVVSWNAMITGYAQNLRLDEALDIFERMPKRDVPSWNTMI 10
           LS+NGR+++AR LFD+MP RNVVSWN M+TGYAQN RL+EAL++F+RMP+R++PSWNTMI
Sbjct: 201 LSKNGRVEDARALFDQMPVRNVVSWNVMVTGYAQNGRLNEALELFQRMPERNMPSWNTMI 260

Query: 9   PGF 1
            GF
Sbjct: 261 TGF 263



 Score =  201 bits (511), Expect = 3e-49
 Identities = 93/212 (43%), Positives = 149/212 (70%)
 Frame = -3

Query: 651 REGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKANAKKNVVTWTALIA 472
           R  ++ EA +LF +MP R+VV+W T++ GY + GL ++A  LF +   ++NVV+W  +I 
Sbjct: 110 RLNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRM-PERNVVSWNTIIT 168

Query: 471 GYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQNGRVDQAFELFEKMPDRNIVSWNTI 292
             ++  ++ +A++LF QM +++VVSW TM++G ++NGRV+ A  LF++MP RN+VSWN +
Sbjct: 169 TLVQCGKVDDAQRLFDQMKERDVVSWTTMVAGLSKNGRVEDARALFDQMPVRNVVSWNVM 228

Query: 291 ITAFAQSGRIDEARRLFDQMPERDVISWTAMITGLSQNGRIDEARELFDKMPERNVVSWN 112
           +T +AQ+GR++EA  LF +MPER++ SW  MITG  QNG ++ A +LF +M  +NV++W 
Sbjct: 229 VTGYAQNGRLNEALELFQRMPERNMPSWNTMITGFIQNGELNHAEKLFREMRVKNVITWT 288

Query: 111 AMITGYAQNLRLDEALDIFERMPKRDVPSWNT 16
           AM+TGY Q+   +EA+ +F +M   D    NT
Sbjct: 289 AMMTGYVQHGLSEEAVKVFNKMLAADGLKPNT 320



 Score = 92.8 bits (229), Expect = 2e-16
 Identities = 69/253 (27%), Positives = 129/253 (50%), Gaps = 22/253 (8%)
 Frame = -3

Query: 696  DQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 517
            ++N+   N  IT   + G+++ A +LF +M  ++V+TWT +++GY++ GL +EA  +F+K
Sbjct: 250  ERNMPSWNTMITGFIQNGELNHAEKLFREMRVKNVITWTAMMTGYVQHGLSEEAVKVFNK 309

Query: 516  ANA----KKNVVTWTAL------IAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQ 367
              A    K N  T+  +      +AG     QI +     +      VVS   +I+ Y++
Sbjct: 310  MLAADGLKPNTGTFVTVLGACSDLAGLTEGQQIHQMISKTIFQDSTYVVS--ALINMYSK 367

Query: 366  NGRVDQAFELFEK--MPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPERDV----ISWT 205
             G +  A ++F+   +  R+++SWN +I A+A  G   EA  LF++M E  V    +++ 
Sbjct: 368  CGELRIARKMFDDGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNEMQELGVPANDVTFV 427

Query: 204  AMITGLSQNGRIDEARELFDKMPERNVVS-----WNAMITGYAQNLRLDEALDIFERM-P 43
             ++T  S  G I+E  + FD++ +   +      +  +I    +  RL EA DI E +  
Sbjct: 428  GLLTACSHTGLIEEGLKYFDEILKNRSIQLREDHYACLIDLCGRAGRLKEAFDIIEGLGE 487

Query: 42   KRDVPSWNTMIPG 4
            +  +  W  ++ G
Sbjct: 488  EASLTVWGALLAG 500


>ref|XP_006296159.1| hypothetical protein CARUB_v10025312mg [Capsella rubella]
           gi|482564867|gb|EOA29057.1| hypothetical protein
           CARUB_v10025312mg [Capsella rubella]
          Length = 636

 Score =  327 bits (839), Expect = 3e-87
 Identities = 147/235 (62%), Positives = 194/235 (82%)
 Frame = -3

Query: 705 HTIDQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFL 526
           ++ +  + R  W I +L REG+I EAR+LFD +PERDVVTWT VI+GYIK G ++EAR L
Sbjct: 49  YSSNSRVPRPEWLIGELCREGRIVEARKLFDGLPERDVVTWTDVITGYIKLGNMREAREL 108

Query: 525 FDKANAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQNGRVDQA 346
           FD+ +++KNVVTWTA+++GY+RS Q+S AE LF  MP++N+VSWNTM+ GYAQ+GR+D+A
Sbjct: 109 FDRVDSRKNVVTWTAMVSGYLRSKQLSVAEMLFQDMPERNIVSWNTMVDGYAQSGRIDKA 168

Query: 345 FELFEKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPERDVISWTAMITGLSQNGRID 166
            ELF++MP++NIVSWNT++ A  Q GRIDEA  LF +MP RDVISWTAM+ GL++NG++D
Sbjct: 169 LELFDEMPEKNIVSWNTMMKALVQRGRIDEAMNLFQRMPRRDVISWTAMVDGLAKNGKVD 228

Query: 165 EARELFDKMPERNVVSWNAMITGYAQNLRLDEALDIFERMPKRDVPSWNTMIPGF 1
           +AR+LFD MPERN++SWNAMITGYA N R+DEA  +F+ MP+RD  SWNTMI GF
Sbjct: 229 DARQLFDSMPERNIISWNAMITGYAHNNRIDEADQLFQVMPERDFASWNTMITGF 283



 Score =  160 bits (406), Expect = 5e-37
 Identities = 83/265 (31%), Positives = 152/265 (57%), Gaps = 42/265 (15%)
 Frame = -3

Query: 708 DHTIDQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARF 529
           D   ++NI   N  +  L + G+I EA  LF +MP RDV++WT ++ G  K G V +AR 
Sbjct: 173 DEMPEKNIVSWNTMMKALVQRGRIDEAMNLFQRMPRRDVISWTAMVDGLAKNGKVDDARQ 232

Query: 528 LFDKANAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQNGRVDQ 349
           LFD +  ++N+++W A+I GY  +N+I EA++LF  MP+++  SWNTMI+G+ +N  +++
Sbjct: 233 LFD-SMPERNIISWNAMITGYAHNNRIDEADQLFQVMPERDFASWNTMITGFIRNKNINR 291

Query: 348 AFELFEKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQM--------------------- 232
           A  LF++MP++N++SW T+IT + ++   ++A + F +M                     
Sbjct: 292 ASVLFDRMPEKNVISWTTMITGYVENKENEDALKFFSKMLRDGYVKPNVGTYVSILSACS 351

Query: 231 -------------------PERDVISWTAMITGLSQNGRIDEARELFDK--MPERNVVSW 115
                               +++ +  +A+I   S++G +  AR++FD   + +R+++SW
Sbjct: 352 DSAGLVEGQQIHQLISKSVHQKNEVVISALINMYSKSGELIAARKMFDNGLVCQRDLISW 411

Query: 114 NAMITGYAQNLRLDEALDIFERMPK 40
           N+MI  YA +    EA++++++M K
Sbjct: 412 NSMIAVYAHHGHGKEAIEMYDQMLK 436



 Score = 73.6 bits (179), Expect = 1e-10
 Identities = 54/228 (23%), Positives = 108/228 (47%), Gaps = 50/228 (21%)
 Frame = -3

Query: 696 DQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIK------------- 556
           +++ +  N  IT   R   I+ A  LFD+MPE++V++WTT+I+GY++             
Sbjct: 270 ERDFASWNTMITGFIRNKNINRASVLFDRMPEKNVISWTTMITGYVENKENEDALKFFSK 329

Query: 555 ------------------------CGLVKEARF--LFDKANAKKNVVTWTALIAGYIRSN 454
                                    GLV+  +   L  K+  +KN V  +ALI  Y +S 
Sbjct: 330 MLRDGYVKPNVGTYVSILSACSDSAGLVEGQQIHQLISKSVHQKNEVVISALINMYSKSG 389

Query: 453 QISEAEKLFVQ--MPDKNVVSWNTMISGYAQNGRVDQAFELFEKMPDRNI----VSWNTI 292
           ++  A K+F    +  ++++SWN+MI+ YA +G   +A E++++M         V++  +
Sbjct: 390 ELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYDQMLKHGFKPSEVTYLNL 449

Query: 291 ITAFAQSGRIDEARRLFDQMPERDVI-----SWTAMITGLSQNGRIDE 163
           + A + +G +++    F ++   + I      +T ++    + GR+ +
Sbjct: 450 LFACSHAGLVEKGMEFFAELVRDESIPLREEHYTCLVDLCGRAGRLKD 497


>ref|NP_181048.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75099187|sp|O64766.1|PP185_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g35030, mitochondrial; Flags: Precursor
           gi|3033399|gb|AAC12843.1| hypothetical protein
           [Arabidopsis thaliana] gi|209414526|gb|ACI46503.1|
           At2g35030 [Arabidopsis thaliana]
           gi|330253957|gb|AEC09051.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  326 bits (835), Expect = 8e-87
 Identities = 148/229 (64%), Positives = 193/229 (84%)
 Frame = -3

Query: 687 ISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKANA 508
           + +  W I +L + GKI+EAR+LFD +PERDVVTWT VI+GYIK G ++EAR LFD+ ++
Sbjct: 46  VPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDS 105

Query: 507 KKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQNGRVDQAFELFEK 328
           +KNVVTWTA+++GY+RS Q+S AE LF +MP++NVVSWNTMI GYAQ+GR+D+A ELF++
Sbjct: 106 RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDE 165

Query: 327 MPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPERDVISWTAMITGLSQNGRIDEARELF 148
           MP+RNIVSWN+++ A  Q GRIDEA  LF++MP RDV+SWTAM+ GL++NG++DEAR LF
Sbjct: 166 MPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLF 225

Query: 147 DKMPERNVVSWNAMITGYAQNLRLDEALDIFERMPKRDVPSWNTMIPGF 1
           D MPERN++SWNAMITGYAQN R+DEA  +F+ MP+RD  SWNTMI GF
Sbjct: 226 DCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGF 274



 Score =  181 bits (460), Expect = 2e-43
 Identities = 93/271 (34%), Positives = 162/271 (59%), Gaps = 42/271 (15%)
 Frame = -3

Query: 696 DQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 517
           ++N+   N  I   ++ G+I +A +LFD+MPER++V+W +++   ++ G + EA  LF++
Sbjct: 137 ERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFER 196

Query: 516 ANAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQNGRVDQAFEL 337
              +++VV+WTA++ G  ++ ++ EA +LF  MP++N++SWN MI+GYAQN R+D+A +L
Sbjct: 197 M-PRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQL 255

Query: 336 FEKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPERDVISWTAMITGLSQNGRIDEAR 157
           F+ MP+R+  SWNT+IT F ++  +++A  LFD+MPE++VISWT MITG  +N   +EA 
Sbjct: 256 FQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEAL 315

Query: 156 ELFDKM----------------------------------------PERNVVSWNAMITG 97
            +F KM                                         ++N +  +A++  
Sbjct: 316 NVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNM 375

Query: 96  YAQNLRLDEALDIFER--MPKRDVPSWNTMI 10
           Y+++  L  A  +F+   + +RD+ SWN+MI
Sbjct: 376 YSKSGELIAARKMFDNGLVCQRDLISWNSMI 406



 Score =  163 bits (413), Expect = 7e-38
 Identities = 96/305 (31%), Positives = 168/305 (55%), Gaps = 43/305 (14%)
 Frame = -3

Query: 825  LSIFQALLPFLP-RLSLSWPQHFFLYHSINKPNKISTTERDHTIDQNISRSNWQITKLSR 649
            LSI + L   +P R  +SW      Y    + +K +    D   ++NI   N  +  L +
Sbjct: 125  LSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDK-ALELFDEMPERNIVSWNSMVKALVQ 183

Query: 648  EGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKANAKKNVVTWTALIAG 469
             G+I EA  LF++MP RDVV+WT ++ G  K G V EAR LFD    ++N+++W A+I G
Sbjct: 184  RGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFD-CMPERNIISWNAMITG 242

Query: 468  YIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQNGRVDQAFELFEKMPDRNIVSWNTII 289
            Y ++N+I EA++LF  MP+++  SWNTMI+G+ +N  +++A  LF++MP++N++SW T+I
Sbjct: 243  YAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMI 302

Query: 288  TAFAQSGRIDEARRLFDQM----------------------------------------P 229
            T + ++   +EA  +F +M                                         
Sbjct: 303  TGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVH 362

Query: 228  ERDVISWTAMITGLSQNGRIDEARELFDK--MPERNVVSWNAMITGYAQNLRLDEALDIF 55
            +++ I  +A++   S++G +  AR++FD   + +R+++SWN+MI  YA +    EA++++
Sbjct: 363  QKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMY 422

Query: 54   ERMPK 40
             +M K
Sbjct: 423  NQMRK 427



 Score = 84.0 bits (206), Expect = 7e-14
 Identities = 51/199 (25%), Positives = 110/199 (55%), Gaps = 16/199 (8%)
 Frame = -3

Query: 696 DQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 517
           +++ +  N  IT   R  ++++A  LFD+MPE++V++WTT+I+GY++    +EA  +F K
Sbjct: 261 ERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSK 320

Query: 516 ----ANAKKNVVTWTAL------IAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQ 367
                + K NV T+ ++      +AG +   QI +   +   +  KN +  + +++ Y++
Sbjct: 321 MLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQL--ISKSVHQKNEIVTSALLNMYSK 378

Query: 366 NGRVDQAFELFEK--MPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPER----DVISWT 205
           +G +  A ++F+   +  R+++SWN++I  +A  G   EA  +++QM +       +++ 
Sbjct: 379 SGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYL 438

Query: 204 AMITGLSQNGRIDEARELF 148
            ++   S  G +++  E F
Sbjct: 439 NLLFACSHAGLVEKGMEFF 457


>ref|XP_002881370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297327209|gb|EFH57629.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 627

 Score =  323 bits (828), Expect = 5e-86
 Identities = 147/229 (64%), Positives = 190/229 (82%)
 Frame = -3

Query: 687 ISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKANA 508
           + R  W I KL + GK++EAR+LFD +PERDVVTWT VI+GYIK G ++EAR LFD+ ++
Sbjct: 46  VPRPEWLIGKLCKVGKLAEARKLFDGLPERDVVTWTDVITGYIKLGNMREARELFDRVDS 105

Query: 507 KKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQNGRVDQAFELFEK 328
           +KNVVTWTA+++GY+RS Q+S AE LF +MP++N+VSWNTMI GYAQ+GR+D+A ELF++
Sbjct: 106 RKNVVTWTAMVSGYLRSKQLSVAETLFQEMPERNIVSWNTMIDGYAQSGRIDKALELFDE 165

Query: 327 MPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPERDVISWTAMITGLSQNGRIDEARELF 148
           MP+RN VSWNT+I A  Q GRIDEA  LF++MP +DVISWTAM+ GL++NG++DEAR LF
Sbjct: 166 MPERNTVSWNTMIKALVQRGRIDEAMNLFERMPIKDVISWTAMVDGLAKNGKVDEARRLF 225

Query: 147 DKMPERNVVSWNAMITGYAQNLRLDEALDIFERMPKRDVPSWNTMIPGF 1
           D MPERN++SWNAMITGY  N R+DEA  +F+ MP+RD  SWNTMI GF
Sbjct: 226 DCMPERNIISWNAMITGYTYNNRIDEADQLFQVMPERDFASWNTMITGF 274



 Score =  159 bits (401), Expect = 2e-36
 Identities = 93/306 (30%), Positives = 167/306 (54%), Gaps = 44/306 (14%)
 Frame = -3

Query: 825  LSIFQALLPFLPRLSL-SWPQHFFLYHSINKPNKISTTERDHTIDQNISRSNWQITKLSR 649
            LS+ + L   +P  ++ SW      Y    + +K +    D   ++N    N  I  L +
Sbjct: 125  LSVAETLFQEMPERNIVSWNTMIDGYAQSGRIDK-ALELFDEMPERNTVSWNTMIKALVQ 183

Query: 648  EGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKANAKKNVVTWTALIAG 469
             G+I EA  LF++MP +DV++WT ++ G  K G V EAR LFD    ++N+++W A+I G
Sbjct: 184  RGRIDEAMNLFERMPIKDVISWTAMVDGLAKNGKVDEARRLFD-CMPERNIISWNAMITG 242

Query: 468  YIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQNGRVDQAFELFEKMPDRNIVSWNTII 289
            Y  +N+I EA++LF  MP+++  SWNTMI+G+ +N  +++A  LF++MP +N++SW  +I
Sbjct: 243  YTYNNRIDEADQLFQVMPERDFASWNTMITGFIRNREINRACGLFDRMPQKNVISWTAMI 302

Query: 288  TAFAQSGRIDEARRLFDQM----------------------------------------- 232
            T + ++   +EA ++F +M                                         
Sbjct: 303  TGYVENKENEEALKVFSKMLRDGCVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVH 362

Query: 231  PERDVISWTAMITGLSQNGRIDEARELFDK--MPERNVVSWNAMITGYAQNLRLDEALDI 58
             E +V++ +A+I   S++G +  AR++FD   + +R+++SWN+MI  YA +    EA+++
Sbjct: 363  QENEVVT-SALINMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEM 421

Query: 57   FERMPK 40
            +++M K
Sbjct: 422  YDQMRK 427


>ref|XP_006410659.1| hypothetical protein EUTSA_v10016379mg [Eutrema salsugineum]
           gi|557111828|gb|ESQ52112.1| hypothetical protein
           EUTSA_v10016379mg [Eutrema salsugineum]
          Length = 626

 Score =  317 bits (812), Expect = 4e-84
 Identities = 145/229 (63%), Positives = 188/229 (82%)
 Frame = -3

Query: 687 ISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKANA 508
           I R  W I KL +EG+I+EAR++FD++P+RD  TWT VI+GYIK G ++EAR LFD+A+A
Sbjct: 45  IPRPEWLIKKLCKEGRIAEARKVFDRLPQRDEYTWTDVITGYIKLGNMREARELFDRADA 104

Query: 507 KKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQNGRVDQAFELFEK 328
           +KNVVTWTA+++GY+R+ Q S AE LF +MP++N VSWNTMI GYAQ+GR+D+A ELF++
Sbjct: 105 RKNVVTWTAMVSGYLRAKQFSAAEMLFQEMPERNEVSWNTMIDGYAQSGRIDKALELFDE 164

Query: 327 MPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPERDVISWTAMITGLSQNGRIDEARELF 148
           MP+RN VSWNT+I A AQ GRI EA  LF++MP RDVISWTAM+ GL +NG++DEAR +F
Sbjct: 165 MPERNTVSWNTLIKALAQLGRIQEAMNLFERMPTRDVISWTAMVDGLGKNGKVDEARRVF 224

Query: 147 DKMPERNVVSWNAMITGYAQNLRLDEALDIFERMPKRDVPSWNTMIPGF 1
           D MPERN +SWNAMITGYA N R++EA  +F+ MP+R+  SWNTMI GF
Sbjct: 225 DCMPERNTISWNAMITGYAHNNRIEEADQLFQVMPERNFASWNTMITGF 273



 Score =  164 bits (415), Expect = 4e-38
 Identities = 88/265 (33%), Positives = 151/265 (56%), Gaps = 42/265 (15%)
 Frame = -3

Query: 708 DHTIDQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARF 529
           D   ++N    N  I  L++ G+I EA  LF++MP RDV++WT ++ G  K G V EAR 
Sbjct: 163 DEMPERNTVSWNTLIKALAQLGRIQEAMNLFERMPTRDVISWTAMVDGLGKNGKVDEARR 222

Query: 528 LFDKANAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQNGRVDQ 349
           +FD    ++N ++W A+I GY  +N+I EA++LF  MP++N  SWNTMI+G+ +NG +++
Sbjct: 223 VFD-CMPERNTISWNAMITGYAHNNRIEEADQLFQVMPERNFASWNTMITGFIRNGEINR 281

Query: 348 AFELFEKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQM--------------------- 232
           A  LF++MP +N++SW T+IT + Q+   ++A ++F  M                     
Sbjct: 282 ACGLFDRMPQKNVISWTTMITGYVQNKENEDALKVFSNMLRDGCVKPNEGTYVSILSACS 341

Query: 231 -------------------PERDVISWTAMITGLSQNGRIDEARELFDK--MPERNVVSW 115
                               +R+ +  +A+I   S+ G +  AR++FD   + +R+++SW
Sbjct: 342 DMAGLVEGQQIHQLISKSVHQRNELVTSAIINMYSKCGELIAARKIFDAGLVSQRDLISW 401

Query: 114 NAMITGYAQNLRLDEALDIFERMPK 40
           N+MI  YA + R  EA++++++M K
Sbjct: 402 NSMIAVYAHHGRGKEAIEMYDQMRK 426


>ref|XP_002322628.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222867258|gb|EEF04389.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 559

 Score =  302 bits (774), Expect = 1e-79
 Identities = 137/203 (67%), Positives = 174/203 (85%)
 Frame = -3

Query: 609 MPERDVVTWTTVISGYIKCGLVKEARFLFDKANAKKNVVTWTALIAGYIRSNQISEAEKL 430
           M ERDVVTWT VISGYIKCGL+ +AR LFD+ +A K+VVTWTA+++GY+R  +I EAE+L
Sbjct: 1   MHERDVVTWTAVISGYIKCGLIVDARRLFDRVDAIKDVVTWTAMLSGYVRLKRIEEAERL 60

Query: 429 FVQMPDKNVVSWNTMISGYAQNGRVDQAFELFEKMPDRNIVSWNTIITAFAQSGRIDEAR 250
           F  MP KNVVSWNTMI GY +N  VD+A E+FE+M +RN+VSWN +I A  Q GR++EAR
Sbjct: 61  FEVMPVKNVVSWNTMIDGYGKNREVDKAIEVFERMHERNMVSWNAVIAALVQCGRVEEAR 120

Query: 249 RLFDQMPERDVISWTAMITGLSQNGRIDEARELFDKMPERNVVSWNAMITGYAQNLRLDE 70
           R FD+MP+RDVISWT M+ GL+++GR+DEAR++FD+MPERNVVSWNAM+TGYA+N+RLDE
Sbjct: 121 RRFDEMPKRDVISWTTMVMGLARSGRVDEARKVFDRMPERNVVSWNAMVTGYAKNMRLDE 180

Query: 69  ALDIFERMPKRDVPSWNTMIPGF 1
           A D+FERMP+R++ SWNTMI GF
Sbjct: 181 AFDLFERMPERNLSSWNTMITGF 203



 Score =  202 bits (513), Expect = 2e-49
 Identities = 93/201 (46%), Positives = 147/201 (73%)
 Frame = -3

Query: 642 KISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKANAKKNVVTWTALIAGYI 463
           +I EA +LF+ MP ++VV+W T+I GY K   V +A  +F++ + ++N+V+W A+IA  +
Sbjct: 53  RIEEAERLFEVMPVKNVVSWNTMIDGYGKNREVDKAIEVFERMH-ERNMVSWNAVIAALV 111

Query: 462 RSNQISEAEKLFVQMPDKNVVSWNTMISGYAQNGRVDQAFELFEKMPDRNIVSWNTIITA 283
           +  ++ EA + F +MP ++V+SW TM+ G A++GRVD+A ++F++MP+RN+VSWN ++T 
Sbjct: 112 QCGRVEEARRRFDEMPKRDVISWTTMVMGLARSGRVDEARKVFDRMPERNVVSWNAMVTG 171

Query: 282 FAQSGRIDEARRLFDQMPERDVISWTAMITGLSQNGRIDEARELFDKMPERNVVSWNAMI 103
           +A++ R+DEA  LF++MPER++ SW  MITG  QNG +  AR++F++MPE+NVVSW  MI
Sbjct: 172 YAKNMRLDEAFDLFERMPERNLSSWNTMITGFIQNGELAWARKVFNEMPEKNVVSWTTMI 231

Query: 102 TGYAQNLRLDEALDIFERMPK 40
           TGY Q    + AL +F  M K
Sbjct: 232 TGYVQEGESESALKVFVEMIK 252



 Score =  187 bits (475), Expect = 5e-45
 Identities = 83/185 (44%), Positives = 136/185 (73%)
 Frame = -3

Query: 693 QNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKA 514
           +N+   N  I    +  ++ +A ++F++M ER++V+W  VI+  ++CG V+EAR  FD+ 
Sbjct: 67  KNVVSWNTMIDGYGKNREVDKAIEVFERMHERNMVSWNAVIAALVQCGRVEEARRRFDEM 126

Query: 513 NAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQNGRVDQAFELF 334
             K++V++WT ++ G  RS ++ EA K+F +MP++NVVSWN M++GYA+N R+D+AF+LF
Sbjct: 127 -PKRDVISWTTMVMGLARSGRVDEARKVFDRMPERNVVSWNAMVTGYAKNMRLDEAFDLF 185

Query: 333 EKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPERDVISWTAMITGLSQNGRIDEARE 154
           E+MP+RN+ SWNT+IT F Q+G +  AR++F++MPE++V+SWT MITG  Q G  + A +
Sbjct: 186 ERMPERNLSSWNTMITGFIQNGELAWARKVFNEMPEKNVVSWTTMITGYVQEGESESALK 245

Query: 153 LFDKM 139
           +F +M
Sbjct: 246 VFVEM 250



 Score =  160 bits (404), Expect = 8e-37
 Identities = 91/270 (33%), Positives = 153/270 (56%), Gaps = 43/270 (15%)
 Frame = -3

Query: 726 ISTTERDHTIDQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGL 547
           I   ER H  ++N+   N  I  L + G++ EAR+ FD+MP+RDV++WTT++ G  + G 
Sbjct: 89  IEVFERMH--ERNMVSWNAVIAALVQCGRVEEARRRFDEMPKRDVISWTTMVMGLARSGR 146

Query: 546 VKEARFLFDKANAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGYAQ 367
           V EAR +FD+   ++NVV+W A++ GY ++ ++ EA  LF +MP++N+ SWNTMI+G+ Q
Sbjct: 147 VDEARKVFDRM-PERNVVSWNAMVTGYAKNMRLDEAFDLFERMPERNLSSWNTMITGFIQ 205

Query: 366 NGRVDQAFELFEKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQM--------------- 232
           NG +  A ++F +MP++N+VSW T+IT + Q G  + A ++F +M               
Sbjct: 206 NGELAWARKVFNEMPEKNVVSWTTMITGYVQEGESESALKVFVEMIKDGGARPNEGTFVN 265

Query: 231 --------------------------PERDVISWTAMITGLSQNGRIDEARELFDK--MP 136
                                      +R  ++ +A++   S+ G +  AR++FD   + 
Sbjct: 266 VLGACSDMAGLGEGQQVHLLISKSVYQDRTFVA-SALLNMYSKCGELSIARKIFDDVVIS 324

Query: 135 ERNVVSWNAMITGYAQNLRLDEALDIFERM 46
           +R++V WN MI  YA +    EA+++FE M
Sbjct: 325 QRDLVLWNGMIAAYAHHGCGMEAIELFEDM 354



 Score = 84.0 bits (206), Expect = 7e-14
 Identities = 63/251 (25%), Positives = 119/251 (47%), Gaps = 51/251 (20%)
 Frame = -3

Query: 696 DQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCG----------- 550
           ++N+S  N  IT   + G+++ AR++F++MPE++VV+WTT+I+GY++ G           
Sbjct: 190 ERNLSSWNTMITGFIQNGELAWARKVFNEMPEKNVVSWTTMITGYVQEGESESALKVFVE 249

Query: 549 LVKEA----------------------------RFLFDKANAKKNVVTWTALIAGYIRSN 454
           ++K+                               L  K+  +      +AL+  Y +  
Sbjct: 250 MIKDGGARPNEGTFVNVLGACSDMAGLGEGQQVHLLISKSVYQDRTFVASALLNMYSKCG 309

Query: 453 QISEAEKLF--VQMPDKNVVSWNTMISGYAQNGRVDQAFELFEKMP----DRNIVSWNTI 292
           ++S A K+F  V +  +++V WN MI+ YA +G   +A ELFE M       N VS+  +
Sbjct: 310 ELSIARKIFDDVVISQRDLVLWNGMIAAYAHHGCGMEAIELFEDMQGLGFKPNDVSYVEL 369

Query: 291 ITAFAQSGRIDEARRLFDQMPERDVIS-----WTAMITGLSQNGRIDEARELFDKMPERN 127
           ++A + +G +DE    FD++   + I         ++    + GR+ EA +   ++  + 
Sbjct: 370 LSACSHAGLVDEGLNYFDELGRDNSIQLREDHHACLVDLCGRAGRLKEAYDFIKQLGTKA 429

Query: 126 VVS-WNAMITG 97
             S W  ++ G
Sbjct: 430 SSSIWGGLLAG 440


>gb|EYU18647.1| hypothetical protein MIMGU_mgv1a022303mg, partial [Mimulus
           guttatus]
          Length = 539

 Score =  285 bits (729), Expect = 2e-74
 Identities = 128/203 (63%), Positives = 169/203 (83%)
 Frame = -3

Query: 609 MPERDVVTWTTVISGYIKCGLVKEARFLFDKANAKKNVVTWTALIAGYIRSNQISEAEKL 430
           MP+RDV++WT +ISGY+KCGLVKEAR LFD+A+AKK+VVTWT++I+GY++S +ISEAE+L
Sbjct: 1   MPDRDVISWTALISGYVKCGLVKEARELFDRADAKKDVVTWTSMISGYLKSKRISEAERL 60

Query: 429 FVQMPDKNVVSWNTMISGYAQNGRVDQAFELFEKMPDRNIVSWNTIITAFAQSGRIDEAR 250
           F  MPDKNVV+WNTMI GY ++GR++ A  +F++M +RN+VSWNT+I+     GRIDEA 
Sbjct: 61  FHAMPDKNVVTWNTMIDGYVRSGRIEHALTVFDEMGERNVVSWNTVISGLVNCGRIDEAM 120

Query: 249 RLFDQMPERDVISWTAMITGLSQNGRIDEARELFDKMPERNVVSWNAMITGYAQNLRLDE 70
             F + P ++VISWT MI+GL++N R+DEAR LFD +PERNVVSWNAMITGYAQN RL E
Sbjct: 121 GFFSRTPLKNVISWTIMISGLARNKRVDEARLLFDTVPERNVVSWNAMITGYAQNTRLSE 180

Query: 69  ALDIFERMPKRDVPSWNTMIPGF 1
           A ++F++MP++D  SWN MI  F
Sbjct: 181 AYNLFKKMPEKDAQSWNAMITAF 203



 Score =  191 bits (486), Expect = 2e-46
 Identities = 104/241 (43%), Positives = 156/241 (64%), Gaps = 8/241 (3%)
 Frame = -3

Query: 738 KPNKISTTER-DHTI-DQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISG 565
           K  +IS  ER  H + D+N+   N  I    R G+I  A  +FD+M ER+VV+W TVISG
Sbjct: 50  KSKRISEAERLFHAMPDKNVVTWNTMIDGYVRSGRIEHALTVFDEMGERNVVSWNTVISG 109

Query: 564 YIKCGLVKEARFLFDKANAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTM 385
            + CG + EA   F +    KNV++WT +I+G  R+ ++ EA  LF  +P++NVVSWN M
Sbjct: 110 LVNCGRIDEAMGFFSR-TPLKNVISWTIMISGLARNKRVDEARLLFDTVPERNVVSWNAM 168

Query: 384 ISGYAQNGRVDQAFELFEKMPDRNIVSWNTIITAFAQSGRIDEARRLFDQMPE-RDVISW 208
           I+GYAQN R+ +A+ LF+KMP+++  SWN +ITAF Q+G +++AR+LFD+MP  ++V+SW
Sbjct: 169 ITGYAQNTRLSEAYNLFKKMPEKDAQSWNAMITAFIQNGELEKARKLFDEMPAGKNVVSW 228

Query: 207 TAMITGLSQNGRIDEARELFDKMPERNVVSWN----AMITGYAQNLR-LDEALDIFERMP 43
           TA+I+GL Q+G  +EA  LF  M + + V  N    A + G   +L  L E + + + + 
Sbjct: 229 TAIISGLMQSGESEEALRLFYVMNKSSKVKPNEATFASVLGACSDLAGLGEGMQVHQVIS 288

Query: 42  K 40
           K
Sbjct: 289 K 289



 Score =  107 bits (268), Expect = 5e-21
 Identities = 73/285 (25%), Positives = 139/285 (48%), Gaps = 50/285 (17%)
 Frame = -3

Query: 708  DHTIDQNISRSNWQITKLSREGKISEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARF 529
            D   ++N+   N  IT  ++  ++SEA  LF +MPE+D  +W  +I+ +I+ G +++AR 
Sbjct: 155  DTVPERNVVSWNAMITGYAQNTRLSEAYNLFKKMPEKDAQSWNAMITAFIQNGELEKARK 214

Query: 528  LFDKANAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWN-------------- 391
            LFD+  A KNVV+WTA+I+G ++S +  EA +LF  M   + V  N              
Sbjct: 215  LFDEMPAGKNVVSWTAIISGLMQSGESEEALRLFYVMNKSSKVKPNEATFASVLGACSDL 274

Query: 390  --------------------------TMISGYAQNGRVDQAFELFEKMPDRNIVSWNTII 289
                                       +I+ Y++ G ++ A ++F+    +++V +N+II
Sbjct: 275  AGLGEGMQVHQVISKTAYQESKFVISALINMYSKCGEIEMARQMFDYNGFKDLVCFNSII 334

Query: 288  TAFAQSGRIDEARRLFDQMPER----DVISWTAMITGLSQNGRIDEARELFDKMPERNVV 121
            +A+A  G   EA  +F++M +     + +++ A+++  S  G + E    F  + +   +
Sbjct: 335  SAYAHHGFGREAISVFEEMQKTGFKPNEVTYVALLSACSHAGLVQEGLNYFKALLKNESL 394

Query: 120  S-----WNAMITGYAQNLRLDEALDIFERMP-KRDVPSWNTMIPG 4
                  +  ++  Y +  +L EA D+ +R P K    SW  ++ G
Sbjct: 395  KVRDDHYTCVVDLYGRAGKLKEAFDLLQRAPLKESAYSWGPLLSG 439


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