BLASTX nr result

ID: Akebia22_contig00015983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00015983
         (339 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004238128.1| PREDICTED: protein DCL, chloroplastic-like [...    59   5e-07
ref|XP_006354844.1| PREDICTED: protein DCL, chloroplastic-like [...    59   7e-07
ref|XP_002283006.1| PREDICTED: protein DCL, chloroplastic [Vitis...    57   3e-06

>ref|XP_004238128.1| PREDICTED: protein DCL, chloroplastic-like [Solanum lycopersicum]
          Length = 197

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 25/44 (56%), Positives = 34/44 (77%)
 Frame = +3

Query: 207 GTKSTTIWSAKDTTPNITRWDSPEYRQWKDRETEILEDIEPITF 338
           G ++T + SAKD  PN  RW  P+YR+WKD+ET+IL+DIEP+ F
Sbjct: 52  GDQTTAVLSAKDP-PNYPRWSDPDYRKWKDQETQILKDIEPVIF 94


>ref|XP_006354844.1| PREDICTED: protein DCL, chloroplastic-like [Solanum tuberosum]
          Length = 197

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 25/44 (56%), Positives = 34/44 (77%)
 Frame = +3

Query: 207 GTKSTTIWSAKDTTPNITRWDSPEYRQWKDRETEILEDIEPITF 338
           G ++T + SAKD  PN  RW  P+YR+WKD+ET+IL+DIEP+ F
Sbjct: 52  GDQTTAVLSAKDP-PNYPRWTDPDYRKWKDQETQILKDIEPVIF 94


>ref|XP_002283006.1| PREDICTED: protein DCL, chloroplastic [Vitis vinifera]
           gi|302142270|emb|CBI19473.3| unnamed protein product
           [Vitis vinifera]
          Length = 194

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/79 (40%), Positives = 43/79 (54%)
 Frame = +3

Query: 99  LGSNREVTPLDSSYRLEDRPFALLPMISLXXXXXXXGTKSTTIWSAKDTTPNITRWDSPE 278
           L  +R   PL   + L  RP+      S          K+TT+ S++D   N  RWD P+
Sbjct: 15  LRHHRLAAPL---FTLAQRPWCSSTESSRSDVNVSYADKNTTVLSSRDPA-NYPRWDDPD 70

Query: 279 YRQWKDRETEILEDIEPIT 335
           +R+WK+RE EIL DIEPIT
Sbjct: 71  FRKWKNREEEILRDIEPIT 89


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