BLASTX nr result
ID: Akebia22_contig00014190
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia22_contig00014190
(1786 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi... 62 3e-19
gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsi... 59 2e-17
gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsi... 67 3e-17
emb|CAN71502.1| hypothetical protein VITISV_021013 [Vitis vinifera] 59 3e-17
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata] 57 4e-17
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana] 58 3e-16
emb|CAN75232.1| hypothetical protein VITISV_016125 [Vitis vinifera] 60 5e-16
gb|AFU25705.1| gag-pol precursor [Castanea mollissima] 61 2e-14
emb|CAE04098.3| OSJNBa0096F01.7 [Oryza sativa Japonica Group] 50 9e-08
gb|AAS88834.1| putative polyprotein [Oryza sativa Japonica Group] 48 4e-07
emb|CAE03668.3| OSJNBa0042N22.10 [Oryza sativa Japonica Group] 50 4e-07
emb|CAD39523.2| OSJNBa0027O01.10 [Oryza sativa Japonica Group] 50 5e-07
emb|CAN69920.1| hypothetical protein VITISV_040637 [Vitis vinifera] 62 6e-07
gb|AAU10826.1| putative polyprotein [Oryza sativa Japonica Group] 50 7e-07
gb|AAX96829.1| retrotransposon protein, putative, unclassified [... 49 7e-07
gb|ABA93826.2| retrotransposon protein, putative, unclassified [... 50 7e-07
gb|ABF98885.1| retrotransposon protein, putative, unclassified [... 49 9e-07
gb|AAL58969.1|AC091811_18 putative gag-pol precursor [Oryza sati... 49 9e-07
gb|ABA93961.1| retrotransposon protein, putative, unclassified, ... 49 9e-07
gb|AAU44318.1| putative polyprotein [Oryza sativa Japonica Group] 48 9e-07
>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1787
Score = 61.6 bits (148), Expect(4) = 3e-19
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Frame = +3
Query: 522 GIKKALITFRRLVTSMFQD*LGKSVEAYVDYLFGKQLCAR--LTTFLTWIISIQEGALEW 695
G+K A T+ RLV MF D L S+E Y+D + K L A +T + ++
Sbjct: 908 GLKNAGATYPRLVNQMFTDQLDHSMEVYIDDMLVKSLRAEEHITHLRQCFQVLNRYNMKL 967
Query: 696 LRLKCTFVVYSRKFLSCLAANCGIKANPDQVKEMVEMPSPK 818
KCTF V S +FL L GI+ANP Q+ ++++PSP+
Sbjct: 968 NPSKCTFGVTSGEFLGYLVTRRGIEANPKQISAIIDLPSPR 1008
Score = 44.3 bits (103), Expect(4) = 3e-19
Identities = 22/49 (44%), Positives = 29/49 (59%)
Frame = +1
Query: 847 KITTLNRFISRESDKCRALYLLFCKSTIFVWTEECEKGVAS*RDTLNIY 993
+I LNRFISR +DKC Y L + F W E+CE+G +TL +Y
Sbjct: 1019 RIAALNRFISRSTDKCLPFYQLLRANKRFEWDEKCEEG-----ETLYLY 1062
Score = 37.0 bits (84), Expect(4) = 3e-19
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +1
Query: 454 REDQEKTAVIMEQGLYCYKVIPLG*K 531
+ D+EKT I +QG YCYKV+P G K
Sbjct: 885 QNDREKTVFITDQGTYCYKVMPFGLK 910
Score = 20.4 bits (41), Expect(4) = 3e-19
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 812 PKNKKEVQRLL 844
P+N +EVQRL+
Sbjct: 1007 PRNTREVQRLI 1017
>gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 58.9 bits (141), Expect(3) = 2e-17
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Frame = +3
Query: 522 GIKKALITFRRLVTSMFQD*LGKSVEAYVDYLFGKQLCAR--LTTFLTWIISIQEGALEW 695
G++ A T+ RLV MF + +GK++E Y+D + K L + + + ++
Sbjct: 590 GLRNAGATYPRLVNKMFSEHVGKTMEVYIDDMLIKSLKKEDHVKHLEECFAILNQYQMKL 649
Query: 696 LRLKCTFVVYSRKFLSCLAANCGIKANPDQVKEMVEMPSPK 818
KCTF V S +FL + GI+ANP+Q+ + MPSPK
Sbjct: 650 NPAKCTFGVPSGEFLGYIVTKRGIEANPNQINAFLNMPSPK 690
Score = 40.0 bits (92), Expect(3) = 2e-17
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +1
Query: 811 PQK*ERSSKATRKITTLNRFISRESDKCRALYLLFCKSTIFVWTEECEK 957
P+ + + T +I LNRFISR +DK Y + + F+W E+CE+
Sbjct: 689 PKNFKEVQRLTGRIAALNRFISRSTDKSLPFYQILKGNKEFLWDEKCEE 737
Score = 38.9 bits (89), Expect(3) = 2e-17
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +1
Query: 457 EDQEKTAVIMEQGLYCYKVIPLG 525
EDQEKT I ++G+YCYKV+P G
Sbjct: 568 EDQEKTLFITDRGIYCYKVMPFG 590
>gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 889
Score = 67.4 bits (163), Expect(3) = 3e-17
Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 5/108 (4%)
Frame = +3
Query: 522 GIKKALITFRRLVTSMFQD*LGKSVEAYVDYLFGKQL-----CARLTTFLTWIISIQEGA 686
G+K A T++RLV MF D LGK++E Y+D + K +L +I +
Sbjct: 369 GLKNAGTTYQRLVNRMFVDQLGKTIEVYIDDMLVKSAHEKDHVPQLRECFKILIKFE--- 425
Query: 687 LEWLRLKCTFVVYSRKFLSCLAANCGIKANPDQVKEMVEMPSPKIRKK 830
++ KC+F V SR+FL L GI+ANP Q+ +EMPSPK+ ++
Sbjct: 426 MKLNPEKCSFEVQSREFLEYLVTERGIEANPKQIAAFIEMPSPKMARE 473
Score = 35.8 bits (81), Expect(3) = 3e-17
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 811 PQK*ERSSKATRKITTLNRFISRESDKCRALYLLFCKSTIFVWTEECEK 957
P+ + T +I LN FISR ++KC Y K F W ++CE+
Sbjct: 468 PKMAREVQRLTGRIPALNGFISRSANKCVPFYQPLRKGKEFDWNKDCEQ 516
Score = 33.9 bits (76), Expect(3) = 3e-17
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +1
Query: 454 REDQEKTAVIMEQGLYCYKVIPLG*K 531
R+ QEKTA I ++G Y YKV+P G K
Sbjct: 346 RDGQEKTAFITDRGTYYYKVMPFGLK 371
>emb|CAN71502.1| hypothetical protein VITISV_021013 [Vitis vinifera]
Length = 936
Score = 59.3 bits (142), Expect(4) = 3e-17
Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 8/113 (7%)
Frame = +3
Query: 522 GIKKALITFRRLVTSMFQD*LGKSVEAYVDYLFGKQLCARLTTFLTWIISIQEGALEWLR 701
G+K A T++RL+T +F+ +G +VE Y+D + ++ T ++ +QE LR
Sbjct: 147 GLKNAGATYQRLMTKIFKPLIGHTVEVYID-----DIVVKIKTREEHVLHLQE-VFHLLR 200
Query: 702 L--------KCTFVVYSRKFLSCLAANCGIKANPDQVKEMVEMPSPKIRKKFK 836
KC F V + KFL + + GI+ +PDQ+K ++E P P+ +K+ +
Sbjct: 201 KYDMKLNPSKCAFGVSAGKFLGFMVSQRGIEVSPDQIKAVMETPPPRNKKELR 253
Score = 37.7 bits (86), Expect(4) = 3e-17
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +1
Query: 436 H*FKLPREDQEKTAVIMEQGLYCYKVIPLG*K 531
H + D+EKTA I GLYCYKV+P G K
Sbjct: 118 HQIPMSPTDEEKTAFITPHGLYCYKVMPFGLK 149
Score = 31.6 bits (70), Expect(4) = 3e-17
Identities = 21/43 (48%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +2
Query: 326 EISKLIRAAFIWEVHNLKSIANIVVV-LKNGKVK-SIDFTNLS 448
EI KL+ + FI EV +AN+VVV K GK + ID+TNL+
Sbjct: 40 EIDKLLESGFIREVAYPDWLANVVVVPKKEGKWRVCIDYTNLN 82
Score = 27.7 bits (60), Expect(4) = 3e-17
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 865 RFISRESDKCRALYLLFCKSTIFVWTEECE 954
RFI+R +D+ R +L K+ WT+ C+
Sbjct: 253 RFIARFTDELRPFFLAIRKAGTHGWTDSCQ 282
>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
Length = 1103
Score = 57.0 bits (136), Expect(3) = 4e-17
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Frame = +3
Query: 522 GIKKALITFRRLVTSMFQD*LGKSVEAYVDYLFGKQLCARLTTFLTWIISIQE--GALEW 695
G+K A T++RLV MF + LGK++E Y+D + K L + ++E G L
Sbjct: 147 GLKNAGATYQRLVNKMFHNHLGKTMEVYIDDMLVKSLKKE-----DHVKHLEECFGILNK 201
Query: 696 LRLK-----CTFVVYSRKFLSCLAANCGIKANPDQVKEMVEMPSPK 818
++K CTF V S +FL + GI+AN +Q+ + MPSP+
Sbjct: 202 YQMKLNPAKCTFGVPSGEFLGYIVTERGIEANSNQINAFLNMPSPR 247
Score = 40.0 bits (92), Expect(3) = 4e-17
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +1
Query: 457 EDQEKTAVIMEQGLYCYKVIPLG*K 531
EDQEKT+ I ++G+YCYKV+P G K
Sbjct: 125 EDQEKTSFITDRGIYCYKVMPFGLK 149
Score = 39.7 bits (91), Expect(3) = 4e-17
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +1
Query: 811 PQK*ERSSKATRKITTLNRFISRESDKCRALYLLFCKSTIFVWTEECEK 957
P+ + + T +I LNRFISR +DK Y + + F+W E+CE+
Sbjct: 246 PRNFKEVQRLTGRIAALNRFISRSTDKSLPFYQILKGNKGFLWDEKCEE 294
>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
Length = 1838
Score = 58.2 bits (139), Expect(3) = 3e-16
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Frame = +3
Query: 522 GIKKALITFRRLVTSMFQD*LGKSVEAYVDYLFGKQLCAR--LTTFLTWIISIQEGALEW 695
G+K A T++R V M D +G++VE Y+D + K L + + ++
Sbjct: 950 GLKNAGATYQRFVNKMLADQIGRTVEVYIDDMLVKSLKPEDHVEHLSKCFDVLNTYGMKL 1009
Query: 696 LRLKCTFVVYSRKFLSCLAANCGIKANPDQVKEMVEMPSPK 818
KCTF V S +FL + GI+ANP Q++ ++E+PSP+
Sbjct: 1010 NPTKCTFGVTSGEFLGYVVTKRGIEANPKQIRAILELPSPR 1050
Score = 40.4 bits (93), Expect(3) = 3e-16
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +1
Query: 811 PQK*ERSSKATRKITTLNRFISRESDKCRALYLLFCKSTIFVWTEECEKGVAS*RDTLN 987
P+ + T +I LNRFISR +DKC Y L + F W ++ E+ +D L+
Sbjct: 1049 PRNAREVQRLTGRIAALNRFISRSTDKCLPFYNLLKRRAQFDWDKDSEEAFEKLKDYLS 1107
Score = 35.0 bits (79), Expect(3) = 3e-16
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 454 REDQEKTAVIMEQGLYCYKVIPLG*K 531
++DQEKT+ + ++G YCYKV+ G K
Sbjct: 927 KDDQEKTSFVTDRGTYCYKVMSFGLK 952
>emb|CAN75232.1| hypothetical protein VITISV_016125 [Vitis vinifera]
Length = 936
Score = 60.1 bits (144), Expect(4) = 5e-16
Identities = 34/107 (31%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Frame = +3
Query: 522 GIKKALITFRRLVTSMFQD*LGKSVEAYVDYLFGKQLCARLTTFLTWIIS--IQEGALEW 695
G+K A T++RL+T +F+ +G +VE Y+D + K F + +++ +++
Sbjct: 147 GLKNAGATYQRLMTKIFKPLIGHTVEVYIDDIVVKSKTRDEHVFHLQEVFHLLRKYSMKL 206
Query: 696 LRLKCTFVVYSRKFLSCLAANCGIKANPDQVKEMVEMPSPKIRKKFK 836
KC F V + KFL + + GI+ +PDQVK ++E P PK +K+ +
Sbjct: 207 NPSKCAFSVNAGKFLGFMTSQRGIEVSPDQVKTVIETPPPKNKKELQ 253
Score = 37.7 bits (86), Expect(4) = 5e-16
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +1
Query: 436 H*FKLPREDQEKTAVIMEQGLYCYKVIPLG*K 531
H + D+EKTA I GLYCYKV+P G K
Sbjct: 118 HQIPMSPTDEEKTAFITPHGLYCYKVMPFGLK 149
Score = 31.2 bits (69), Expect(4) = 5e-16
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +2
Query: 326 EISKLIRAAFIWEVHNLKSIANIVVV-LKNGKVK-SIDFTNLS 448
EI KL+ FI EV +AN+VVV K GK + +D+TNL+
Sbjct: 40 EIDKLLEVGFIREVDYPDWLANVVVVPKKEGKWRVCVDYTNLN 82
Score = 23.1 bits (48), Expect(4) = 5e-16
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +2
Query: 812 PKNKKEVQRL 841
PKNKKE+QRL
Sbjct: 246 PKNKKELQRL 255
>gb|AFU25705.1| gag-pol precursor [Castanea mollissima]
Length = 1106
Score = 60.8 bits (146), Expect(2) = 2e-14
Identities = 36/105 (34%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Frame = +3
Query: 522 GIKKALITFRRLVTSMFQD*LGKSVEAYVDYLF--GKQLCARLTTFLTWIISIQEGALEW 695
G+K A T++R+VT MF LG+++EAY+D + K++ L +++ L
Sbjct: 219 GLKNAGSTYQRMVTRMFDSQLGRTMEAYIDDMVIKSKKVGDHLKDLHETFSVLRKHKLRL 278
Query: 696 LRLKCTFVVYSRKFLSCLAANCGIKANPDQVKEMVEMPSPKIRKK 830
KC+F V S KFL + + GI+ NPDQ+K ++E+ P+ K+
Sbjct: 279 NASKCSFGVDSGKFLGYMITHRGIEFNPDQIKAILELHPPRNPKE 323
Score = 47.0 bits (110), Expect(2) = 2e-14
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +1
Query: 808 PPQK*ERSSKATRKITTLNRFISRESDKCRALYLLFCKSTIFVWTEEC 951
PP+ + K LNRFISR +D+CR Y L K F+WT+EC
Sbjct: 317 PPRNPKEVQKLAGMFAVLNRFISRSADRCRPFYRLLHKWKDFLWTDEC 364
>emb|CAE04098.3| OSJNBa0096F01.7 [Oryza sativa Japonica Group]
Length = 1946
Score = 50.1 bits (118), Expect(2) = 9e-08
Identities = 52/195 (26%), Positives = 83/195 (42%), Gaps = 19/195 (9%)
Frame = +1
Query: 436 H*FKLPREDQEKTAVIMEQGLYCYKVIPLG*KRH*LLFEGWSQV-----------CFKTD 582
H ++ RED+EKTA I G YCY +P G K F+ +++ + D
Sbjct: 843 HQIRMAREDEEKTAFITPIGTYCYTTMPFGLKNAGPTFQRTTRISLGSQLGRNVEAYVDD 902
Query: 583 WVKALRH--M*ITCLANNYVQD*PPF*LGLSVFRRVR*N------GLD*NALLSFILGSF 738
V +R+ M ++ LA + R++ N G+ LL F++ +
Sbjct: 903 LVVKMRNQEMLLSDLAETFES---------LRSARIKLNPDKCVFGVPAGKLLGFLVSA- 952
Query: 739 *VA*PPIVELKPTPIKSKKW*KCPPQK*ERSSKATRKITTLNRFISRESDKCRALYLLFC 918
+E P I++ + + PP K T + L+RFISR +K L+ L
Sbjct: 953 -----RGIEANPEKIRAIERMR-PPSKLRDVQCVTGCMAALSRFISRLGEKALPLFKLLK 1006
Query: 919 KSTIFVWTEECEKGV 963
+S F WTEE E +
Sbjct: 1007 RSGPFTWTEEAENAL 1021
Score = 35.0 bits (79), Expect(2) = 9e-08
Identities = 21/43 (48%), Positives = 33/43 (76%), Gaps = 2/43 (4%)
Frame = +2
Query: 326 EISKLIRAAFIWEVHNLKSIANIVVVLK-NGKVK-SIDFTNLS 448
E+++L+ A FI EV +L+ +AN VVV K NGK++ ID+T+L+
Sbjct: 765 EVARLLEAGFIREVIHLEWLANPVVVPKANGKLRMCIDYTDLN 807
>gb|AAS88834.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1937
Score = 47.8 bits (112), Expect(2) = 4e-07
Identities = 51/195 (26%), Positives = 82/195 (42%), Gaps = 19/195 (9%)
Frame = +1
Query: 436 H*FKLPREDQEKTAVIMEQGLYCYKVIPLG*KRH*LLFEGWSQV-----------CFKTD 582
H ++ RED+EKTA I G YCY +P G K F+ +++ + D
Sbjct: 909 HQIRMAREDEEKTAFITPIGTYCYTTMPFGLKNAGPTFQRTTRISLGSQIGRNVEAYVDD 968
Query: 583 WVKALRHM*--ITCLANNYVQD*PPF*LGLSVFRRVR*N------GLD*NALLSFILGSF 738
V R+ ++ LA + R++ N G+ LL F++ +
Sbjct: 969 LVVKTRNQETLLSDLAETFES---------LRSARIKLNPDKCVFGVPAGKLLGFLVSA- 1018
Query: 739 *VA*PPIVELKPTPIKSKKW*KCPPQK*ERSSKATRKITTLNRFISRESDKCRALYLLFC 918
+E P I++ + + PP K T + L+RFISR +K L+ L
Sbjct: 1019 -----RGIEANPEKIRAIERMR-PPSKLRDVQCVTGCMAALSRFISRLGEKALPLFKLLK 1072
Query: 919 KSTIFVWTEECEKGV 963
+S F WTEE E+ +
Sbjct: 1073 RSGPFTWTEEAERAL 1087
Score = 35.0 bits (79), Expect(2) = 4e-07
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Frame = +2
Query: 272 VKQSHEGSLPILCDAVN*EISKLIRAAFIWEVHNLKSIANIVVVLK-NGKVK-SIDFTNL 445
V+Q P D + E+++L+ A FI EV + + +AN VVV K NGK++ ID+T+L
Sbjct: 813 VRQKVRRQAPERQDFIREEVARLLEAGFIREVIHPEWLANPVVVPKANGKLRMCIDYTDL 872
Query: 446 S 448
+
Sbjct: 873 N 873
>emb|CAE03668.3| OSJNBa0042N22.10 [Oryza sativa Japonica Group]
Length = 1900
Score = 50.4 bits (119), Expect(2) = 4e-07
Identities = 54/203 (26%), Positives = 85/203 (41%), Gaps = 19/203 (9%)
Frame = +1
Query: 436 H*FKLPREDQEKTAVIMEQGLYCYKVIPLG*KRH*LLFEGWSQV-----------CFKTD 582
H ++ RED+EKTA I G YCY IP G K F+ +++ + D
Sbjct: 833 HQIRMAREDEEKTAFITPIGTYCYTTIPFGLKNAGPTFQRTTRISLGSQLGRNVEAYVDD 892
Query: 583 WVKALRHM--*ITCLANNYVQD*PPF*LGLSVFRRVR*N------GLD*NALLSFILGSF 738
V R+ +T LA + R++ N G+ LL F++ +
Sbjct: 893 LVVKTRNQGTLLTDLAETFES---------LRSARIKLNPDKCVFGVPAGKLLGFLVSA- 942
Query: 739 *VA*PPIVELKPTPIKSKKW*KCPPQK*ERSSKATRKITTLNRFISRESDKCRALYLLFC 918
+E P I++ + + PP K T + L+RFISR +K L+ L
Sbjct: 943 -----RGIEANPEKIRAIERMR-PPSKLRDVQCVTGCMAALSRFISRLGEKALPLFKLLK 996
Query: 919 KSTIFVWTEECEKGVAS*RDTLN 987
+S F WTEE E + ++ L+
Sbjct: 997 RSGPFTWTEEAENALTRLKEYLS 1019
Score = 32.3 bits (72), Expect(2) = 4e-07
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Frame = +2
Query: 272 VKQSHEGSLPILCDAVN*EISKLIRAAFIWEVHNLKSIANIVVVLK-NGKVK-SIDFTNL 445
V+Q + P + E+++L+ A FI EV + + +AN VVV K NGK++ ID+T L
Sbjct: 737 VRQKVQRQAPKRQAFIREEVARLLEAGFIREVIHPEWLANPVVVPKANGKLRMCIDYTGL 796
Query: 446 S 448
+
Sbjct: 797 N 797
>emb|CAD39523.2| OSJNBa0027O01.10 [Oryza sativa Japonica Group]
Length = 2020
Score = 50.1 bits (118), Expect(2) = 5e-07
Identities = 66/258 (25%), Positives = 104/258 (40%), Gaps = 19/258 (7%)
Frame = +1
Query: 436 H*FKLPREDQEKTAVIMEQGLYCYKVIPLG*KRH*LLFEGWSQV-----------CFKTD 582
H ++ RED+EKTA I G YCY +P G K F+ +++ + D
Sbjct: 924 HQIRMAREDEEKTAFITPIGTYCYTTMPFGLKNAGPTFQRTTRISLGNQLGRNVEAYVDD 983
Query: 583 WVKALRH--M*ITCLANNYVQD*PPF*LGLSVFRRVR*N------GLD*NALLSFILGSF 738
V R+ M ++ LA + R++ N G+ LL F++ +
Sbjct: 984 LVVKTRNQEMLLSDLAETFES---------LRSARIKLNPDKCVFGVPAGKLLGFLVSA- 1033
Query: 739 *VA*PPIVELKPTPIKSKKW*KCPPQK*ERSSKATRKITTLNRFISRESDKCRALYLLFC 918
+E P I++ + + PP K T + L+RFISR +K L+ L
Sbjct: 1034 -----RGIEANPEKIRAIERMR-PPSKLRDVQCVTGCMAALSRFISRLGEKALPLFKLLK 1087
Query: 919 KSTIFVWTEECEKGVAS*RDTLNIYRSFNWFRRIDLPPIKSLSHFLQFILFS*SDNHVTN 1098
+ F WTEE E + L Y + PP++ L +L S V
Sbjct: 1088 RFGPFTWTEEAENALTQ----LKAY--------LSSPPVQPLLLYLAATPQVVSVALVVE 1135
Query: 1099 QDHNRNMFSKLLNPKWTW 1152
+D N + F+ L +P TW
Sbjct: 1136 RDENNSHFT-LPHPVPTW 1152
Score = 32.3 bits (72), Expect(2) = 5e-07
Identities = 20/43 (46%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Frame = +2
Query: 326 EISKLIRAAFIWEVHNLKSIANIVVVLK-NGKVK-SIDFTNLS 448
E+++L+ A FI EV + + +AN VVV K NGK++ ID+T+L+
Sbjct: 846 EVARLLEAGFIREVIHPEWLANPVVVPKANGKLRMCIDYTDLN 888
>emb|CAN69920.1| hypothetical protein VITISV_040637 [Vitis vinifera]
Length = 1042
Score = 62.4 bits (150), Expect = 6e-07
Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 7/112 (6%)
Frame = +3
Query: 522 GIKKALITFRRLVTSMFQD*LGKSVEAYVDYLFGKQLCARLTTFLTWIISIQEG------ 683
G+K A T++RL+T +F+ +G+SVE Y+D + + T I+ +QE
Sbjct: 147 GLKNAGATYQRLMTKIFKPLIGRSVEVYID-----DIVVKSKTREQHILHLQEVFYLLRK 201
Query: 684 -ALEWLRLKCTFVVYSRKFLSCLAANCGIKANPDQVKEMVEMPSPKIRKKFK 836
++ KC F V + KFL + + GI+ +PDQVK ++E P P+ +KK +
Sbjct: 202 YGMKLNPSKCAFGVSADKFLGFMVSQRGIEVSPDQVKAVIETPPPRNKKKLQ 253
Score = 46.2 bits (108), Expect(2) = 4e-06
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 11/187 (5%)
Frame = +1
Query: 436 H*FKLPREDQEKTAVIMEQGLYCYKVIPLG*KRH*LLFEGWSQVCFKTDWVKALRHM*IT 615
H + +D+EKTA I LYCYKV+P G K ++ FK +++
Sbjct: 118 HQIPMSPDDKEKTAFITPHDLYCYKVMPFGLKNAGATYQRLMTKIFKPLIGRSVEVYIDD 177
Query: 616 CLANNYVQD*PPF*LGLSVFRRVR*NGLD*NA-----------LLSFILGSF*VA*PPIV 762
+ + ++ L VF +R G+ N L F++ +
Sbjct: 178 IVVKSKTREQHILHLQ-EVFYLLRKYGMKLNPSKCAFGVSADKFLGFMVSQ------RGI 230
Query: 763 ELKPTPIKSKKW*KCPPQK*ERSSKATRKITTLNRFISRESDKCRALYLLFCKSTIFVWT 942
E+ P +K+ PP+ ++ + T K+ L RFI+R +D+ R +L K+ WT
Sbjct: 231 EVSPDQVKAVIE-TPPPRNKKKLQRLTGKLVALGRFIARFTDELRPFFLAIRKAGTHGWT 289
Query: 943 EECEKGV 963
+ C+ +
Sbjct: 290 DNCQNAL 296
Score = 33.1 bits (74), Expect(2) = 4e-06
Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +2
Query: 326 EISKLIRAAFIWEVHNLKSIANIVVV-LKNGKVK-SIDFTNLS 448
EI KL+ A FI EV +ANIVVV K GK + +D+TNL+
Sbjct: 40 EIDKLLEAGFIREVSYPDWLANIVVVPKKEGKWRVCVDYTNLN 82
>gb|AAU10826.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1970
Score = 49.7 bits (117), Expect(2) = 7e-07
Identities = 51/193 (26%), Positives = 83/193 (43%), Gaps = 17/193 (8%)
Frame = +1
Query: 436 H*FKLPREDQEKTAVIMEQGLYCYKVIPLG*KRH*LLFEGWSQV-----------CFKTD 582
H ++ RED+EKTA I G+YCY +P G K F+ +++ + D
Sbjct: 867 HQIRMAREDEEKTAFITPIGIYCYTTMPFGLKNAGPTFQRTTRISLGSQIGRNVEAYVDD 926
Query: 583 WVKALRHM*ITCLANNYVQD*PPF*LGLSVFRRVR*N------GLD*NALLSFILGSF*V 744
V R+ L ++ V+ R++ N G+ LL F++ +
Sbjct: 927 LVVKTRNQ--ETLLSDLVET-----FESLRSARIKLNPDKCVFGVPAGKLLGFLVSA--- 976
Query: 745 A*PPIVELKPTPIKSKKW*KCPPQK*ERSSKATRKITTLNRFISRESDKCRALYLLFCKS 924
+E P I++ + + PP K T + L+RFISR +K L+ L +S
Sbjct: 977 ---RGIEANPEKIRAIERMR-PPSKLRDVQCVTGCMAALSRFISRLGEKALPLFKLLKRS 1032
Query: 925 TIFVWTEECEKGV 963
F WTEE E+ +
Sbjct: 1033 GPFTWTEEAERAL 1045
Score = 32.3 bits (72), Expect(2) = 7e-07
Identities = 20/43 (46%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Frame = +2
Query: 326 EISKLIRAAFIWEVHNLKSIANIVVVLK-NGKVK-SIDFTNLS 448
E+++L+ A FI EV + + +AN VVV K NGK++ ID+T+L+
Sbjct: 789 EVARLLEAGFIREVIHPEWLANPVVVPKANGKLRMCIDYTDLN 831
>gb|AAX96829.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|77550075|gb|ABA92872.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group]
Length = 1914
Score = 48.9 bits (115), Expect(2) = 7e-07
Identities = 52/195 (26%), Positives = 82/195 (42%), Gaps = 19/195 (9%)
Frame = +1
Query: 436 H*FKLPREDQEKTAVIMEQGLYCYKVIPLG*KRH*LLFEGWSQV-----------CFKTD 582
H ++ RED+EKTA I G YCY +P G K F+ +++ + D
Sbjct: 811 HQIRMAREDEEKTAFITPIGTYCYTTMPFGLKNAGPTFQRTTRISLGNQLGRNVEAYVDD 870
Query: 583 WVKALRH--M*ITCLANNYVQD*PPF*LGLSVFRRVR*N------GLD*NALLSFILGSF 738
V R+ M ++ LA + R++ N G+ LL F++ +
Sbjct: 871 LVVKTRNQEMLLSDLAETFES---------LRSARIKLNPDKCVFGVPAGKLLGFLVSA- 920
Query: 739 *VA*PPIVELKPTPIKSKKW*KCPPQK*ERSSKATRKITTLNRFISRESDKCRALYLLFC 918
+E P I++ + + PP K T + L+RFISR +K L+ L
Sbjct: 921 -----RGIEANPEKIRAIERMR-PPSKLRDVQCVTGCMAALSRFISRLGEKALPLFKLLK 974
Query: 919 KSTIFVWTEECEKGV 963
+S F WTEE E +
Sbjct: 975 RSGPFTWTEEAENAL 989
Score = 33.1 bits (74), Expect(2) = 7e-07
Identities = 20/43 (46%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Frame = +2
Query: 326 EISKLIRAAFIWEVHNLKSIANIVVVLK-NGKVK-SIDFTNLS 448
E+++L+ A FI EV + + +AN VVV K NGK++ ID+T+L+
Sbjct: 733 EVARLLEAGFIREVIHPEWLANAVVVPKANGKLRMCIDYTDLN 775
>gb|ABA93826.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1739
Score = 50.4 bits (119), Expect(2) = 7e-07
Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 19/193 (9%)
Frame = +1
Query: 436 H*FKLPREDQEKTAVIMEQGLYCYKVIPLG*KRH*LLFEGWSQV-----------CFKTD 582
H ++ RED+EKTA I G YCY +P G K F+ +++ + D
Sbjct: 775 HQIRMAREDEEKTAFITPIGTYCYTTMPFGLKNAGPTFQRTTRISLGSQIGRNVEAYVDD 834
Query: 583 WVKALRHM*--ITCLANNYVQD*PPF*LGLSVFRRVR*N------GLD*NALLSFILGSF 738
V R+ ++ LA + R++ N G+ LL F++ +
Sbjct: 835 LVVKTRNQETLLSDLAETFES---------LRSARIKLNPDKCVFGVPAGKLLGFLVSA- 884
Query: 739 *VA*PPIVELKPTPIKSKKW*KCPPQK*ERSSKATRKITTLNRFISRESDKCRALYLLFC 918
+E P I++ + + PP K T + TL+RFISR +K L+ L
Sbjct: 885 -----RGIEANPEKIRAIERMR-PPSKLRDVQCVTGCMATLSRFISRLGEKALPLFKLLK 938
Query: 919 KSTIFVWTEECEK 957
+S F+WTEE E+
Sbjct: 939 RSGPFIWTEEAER 951
Score = 31.6 bits (70), Expect(2) = 7e-07
Identities = 20/43 (46%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Frame = +2
Query: 326 EISKLIRAAFIWEVHNLKSIANIVVVLK-NGKVK-SIDFTNLS 448
E+++L A FI EV + + +AN VVV K NGK++ ID+T+L+
Sbjct: 697 EVARLFEAGFIREVIHPEWLANPVVVPKANGKLRMCIDYTDLN 739
>gb|ABF98885.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2012
Score = 49.3 bits (116), Expect(2) = 9e-07
Identities = 55/207 (26%), Positives = 86/207 (41%), Gaps = 19/207 (9%)
Frame = +1
Query: 436 H*FKLPREDQEKTAVIMEQGLYCYKVIPLG*KRH*LLFEGWSQV-----------CFKTD 582
H ++ RED+EKTA I G YCY +P G K F+ +++ + D
Sbjct: 926 HQIRMAREDEEKTAFITPIGTYCYTTMPFGLKNAGPTFQRTTRISLGNQLGRNVEAYVDD 985
Query: 583 WVKALRH--M*ITCLANNYVQD*PPF*LGLSVFRRVR*N------GLD*NALLSFILGSF 738
V R+ M ++ LA + R++ N G+ LL F++ +
Sbjct: 986 LVVKTRNQEMLLSDLAETFES---------LRSARIKLNPDKCVFGVPAGKLLGFLVSA- 1035
Query: 739 *VA*PPIVELKPTPIKSKKW*KCPPQK*ERSSKATRKITTLNRFISRESDKCRALYLLFC 918
+E P I++ + + PP K T + L+RFISR +K L+ L
Sbjct: 1036 -----RGIEANPEKIRAIERMR-PPSKLRDVQCVTGCMAALSRFISRLGEKALPLFKLLK 1089
Query: 919 KSTIFVWTEECEKGVAS*RDTLNIYRS 999
+S F WTEE E + L +Y S
Sbjct: 1090 RSGPFTWTEEAENALTQ----LKVYLS 1112
Score = 32.3 bits (72), Expect(2) = 9e-07
Identities = 20/43 (46%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Frame = +2
Query: 326 EISKLIRAAFIWEVHNLKSIANIVVVLK-NGKVK-SIDFTNLS 448
E+++L+ A FI EV + + +AN VVV K NGK++ ID+T+L+
Sbjct: 848 EVARLLEAGFIREVIHPEWLANPVVVPKANGKLRMCIDYTDLN 890
>gb|AAL58969.1|AC091811_18 putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 1997
Score = 49.3 bits (116), Expect(2) = 9e-07
Identities = 55/207 (26%), Positives = 86/207 (41%), Gaps = 19/207 (9%)
Frame = +1
Query: 436 H*FKLPREDQEKTAVIMEQGLYCYKVIPLG*KRH*LLFEGWSQV-----------CFKTD 582
H ++ RED+EKTA I G YCY +P G K F+ +++ + D
Sbjct: 926 HQIRMAREDEEKTAFITPIGTYCYTTMPFGLKNAGPTFQRTTRISLGNQLGRNVEAYVDD 985
Query: 583 WVKALRH--M*ITCLANNYVQD*PPF*LGLSVFRRVR*N------GLD*NALLSFILGSF 738
V R+ M ++ LA + R++ N G+ LL F++ +
Sbjct: 986 LVVKTRNQEMLLSDLAETFES---------LRSARIKLNPDKCVFGVPAGKLLGFLVSA- 1035
Query: 739 *VA*PPIVELKPTPIKSKKW*KCPPQK*ERSSKATRKITTLNRFISRESDKCRALYLLFC 918
+E P I++ + + PP K T + L+RFISR +K L+ L
Sbjct: 1036 -----RGIEANPEKIRAIERMR-PPSKLRDVQCVTGCMAALSRFISRLGEKALPLFKLLK 1089
Query: 919 KSTIFVWTEECEKGVAS*RDTLNIYRS 999
+S F WTEE E + L +Y S
Sbjct: 1090 RSGPFTWTEEAENALTQ----LKVYLS 1112
Score = 32.3 bits (72), Expect(2) = 9e-07
Identities = 20/43 (46%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Frame = +2
Query: 326 EISKLIRAAFIWEVHNLKSIANIVVVLK-NGKVK-SIDFTNLS 448
E+++L+ A FI EV + + +AN VVV K NGK++ ID+T+L+
Sbjct: 848 EVARLLEAGFIREVIHPEWLANPVVVPKANGKLRMCIDYTDLN 890
>gb|ABA93961.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1986
Score = 49.3 bits (116), Expect(2) = 9e-07
Identities = 52/195 (26%), Positives = 81/195 (41%), Gaps = 19/195 (9%)
Frame = +1
Query: 436 H*FKLPREDQEKTAVIMEQGLYCYKVIPLG*KRH*LLFEGWSQV-----------CFKTD 582
H ++ RED+EKTA I G YCY +P G K F+ +++ + D
Sbjct: 924 HQIRMAREDEEKTAFITPIGTYCYTTMPFGLKNAGPTFQRTTRISLGSQLGRNVEAYVDD 983
Query: 583 WVKALRHM--*ITCLANNYVQD*PPF*LGLSVFRRVR*N------GLD*NALLSFILGSF 738
V R+ +T LA + R++ N G+ LL F++ +
Sbjct: 984 LVVKTRNQETLLTDLAETFAS---------LRSARIKLNPDKCVFGVPAGKLLGFLVSA- 1033
Query: 739 *VA*PPIVELKPTPIKSKKW*KCPPQK*ERSSKATRKITTLNRFISRESDKCRALYLLFC 918
+E P I++ + + PP K T + L+RFISR +K L+ L
Sbjct: 1034 -----RGIEANPEKIRAIERMR-PPSKLRDVQCVTGCMAALSRFISRLGEKALPLFKLLK 1087
Query: 919 KSTIFVWTEECEKGV 963
+S F WTEE E +
Sbjct: 1088 RSGPFTWTEEAENAL 1102
Score = 32.3 bits (72), Expect(2) = 9e-07
Identities = 20/43 (46%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Frame = +2
Query: 326 EISKLIRAAFIWEVHNLKSIANIVVVLK-NGKVK-SIDFTNLS 448
E+++L+ A FI EV + + +AN VVV K NGK++ ID+T+L+
Sbjct: 846 EVARLLEAGFIREVIHPEWLANPVVVPKANGKLRMCIDYTDLN 888
>gb|AAU44318.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1333
Score = 47.8 bits (112), Expect(2) = 9e-07
Identities = 51/195 (26%), Positives = 82/195 (42%), Gaps = 19/195 (9%)
Frame = +1
Query: 436 H*FKLPREDQEKTAVIMEQGLYCYKVIPLG*KRH*LLFEGWSQV-----------CFKTD 582
H ++ RED+EKTA I G YCY +P G K F+ +++ + D
Sbjct: 924 HQIRMAREDEEKTAFITPIGTYCYTTMPFGLKNAGPTFQRTTRISLGSQIGRNVEAYVDD 983
Query: 583 WVKALRHM*--ITCLANNYVQD*PPF*LGLSVFRRVR*N------GLD*NALLSFILGSF 738
V R+ ++ LA + R++ N G+ LL F++ +
Sbjct: 984 LVVKTRNQETLLSDLAETFES---------LRSARIKLNPDKCVFGVPAGKLLGFLVSA- 1033
Query: 739 *VA*PPIVELKPTPIKSKKW*KCPPQK*ERSSKATRKITTLNRFISRESDKCRALYLLFC 918
+E P I++ + + PP K T + L+RFISR +K L+ L
Sbjct: 1034 -----RGIEANPEKIRAIERMR-PPSKLRDVQCVTGCMAALSRFISRLGEKALPLFKLLK 1087
Query: 919 KSTIFVWTEECEKGV 963
+S F WTEE E+ +
Sbjct: 1088 RSGPFTWTEEAERAL 1102
Score = 33.9 bits (76), Expect(2) = 9e-07
Identities = 21/43 (48%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Frame = +2
Query: 326 EISKLIRAAFIWEVHNLKSIANIVVVLK-NGKVK-SIDFTNLS 448
E+++L+ A FI EV + K +AN VVV K NGK++ ID+T+L+
Sbjct: 846 EVARLLEAGFIREVIHPKWLANPVVVPKANGKLRMCIDYTDLN 888