BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00012876
         (1518 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [V...   187   8e-45
emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]   187   8e-45
ref|XP_006423961.1| hypothetical protein CICLE_v10027890mg [Citr...   146   3e-32
ref|XP_007207211.1| hypothetical protein PRUPE_ppa001899mg [Prun...   140   1e-30
ref|XP_006358519.1| PREDICTED: transcription factor PIF3-like [S...   137   1e-29
ref|XP_006382253.1| Phytochrome-interacting factor 3 family prot...   134   8e-29
ref|XP_004230368.1| PREDICTED: transcription factor PIF3-like [S...   134   1e-28
emb|CBI39676.3| unnamed protein product [Vitis vinifera]              132   3e-28
ref|XP_007031281.1| Phytochrome interacting factor 3, putative i...   132   4e-28
ref|XP_007031280.1| Phytochrome interacting factor 3, putative i...   132   4e-28
ref|XP_007031279.1| Phytochrome interacting factor 3, putative i...   132   4e-28
ref|XP_007031278.1| Phytochrome interacting factor 3, putative i...   132   4e-28
ref|XP_002319450.2| hypothetical protein POPTR_0013s00310g [Popu...   130   1e-27
gb|AEX32796.1| phytochrome-interacting factor 3 [Malus domestica]     126   3e-26
gb|EXB57555.1| hypothetical protein L484_022662 [Morus notabilis]     119   3e-24
ref|XP_002512587.1| conserved hypothetical protein [Ricinus comm...   113   2e-22
ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [C...   112   4e-22
ref|XP_004302325.1| PREDICTED: transcription factor PIF3-like [F...   109   3e-21
ref|XP_006840391.1| hypothetical protein AMTR_s00045p00141060 [A...   107   1e-20
ref|XP_003591255.1| Transcription factor PIF3 [Medicago truncatu...   100   2e-18

>ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
          Length = 752

 Score =  187 bits (476), Expect = 8e-45
 Identities = 114/265 (43%), Positives = 160/265 (60%), Gaps = 6/265 (2%)
 Frame = +3

Query: 714  MPYSQFHQMAKGELELTQPKLTNCSADPVFVPDHEFAELVWENGQILMQGQSNRTRKTPP 893
            MP+S+ ++MAKG+ E  Q K  + S    F P+++F ELVWE GQI+MQGQS+R RK+P 
Sbjct: 1    MPFSELYRMAKGKPESVQQKTNDLS----FGPENDFVELVWEGGQIMMQGQSSRARKSPL 56

Query: 894  CTGFMSLISKDQEKDGRDTLTAKIEKFGGNVDSILNDFSTSGSSAGQMGLGQEDELIHWL 1073
               F S   K ++KD      +K+ KFG ++D ILNDF  S  SA +MGL Q+D+++ WL
Sbjct: 57   SNSFPSHTPKPRDKDTGHGTNSKMGKFG-SMDFILNDFPLSVPSA-EMGLSQDDDMVPWL 114

Query: 1074 NYPLE-----DYSSEFFSELSGVNSDVHSSQNNTITIDKNNSNNQIVKDSHMVPVYSGGN 1238
            NYP++     DY S+F  ELSGV  +  S+  N  + +K NSNNQ +KDS+ +  ++G +
Sbjct: 115  NYPIDESLQHDYCSDFLQELSGVTVNELSTHCNFASGEKRNSNNQTIKDSNTISAHNGVS 174

Query: 1239 PEQGNASKVYREGHEPPRILRXXXXXXXXXXXXXTSFPSHTSRVSDFTASNTKSA-HKAP 1415
             EQGNASK    G EP R  R             T FPS  S+VSD  ++NT +A H   
Sbjct: 175  LEQGNASKASAAGVEPSR-PRSSQLYPPSSQQCQTLFPSMRSKVSDPISNNTSNAMHHTV 233

Query: 1416 FGNSTQNPTSTSRPMNSRMEKQNTG 1490
             GNS + P STS   +++ +KQ+ G
Sbjct: 234  SGNSIRLPASTSGFSSTKTQKQDPG 258


>emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
          Length = 627

 Score =  187 bits (476), Expect = 8e-45
 Identities = 114/265 (43%), Positives = 160/265 (60%), Gaps = 6/265 (2%)
 Frame = +3

Query: 714  MPYSQFHQMAKGELELTQPKLTNCSADPVFVPDHEFAELVWENGQILMQGQSNRTRKTPP 893
            MP+S+ ++MAKG+ E  Q K  + S    F P+++F ELVWE GQI+MQGQS+R RK+P 
Sbjct: 1    MPFSELYRMAKGKPESVQQKTNDLS----FGPENDFVELVWEGGQIMMQGQSSRARKSPL 56

Query: 894  CTGFMSLISKDQEKDGRDTLTAKIEKFGGNVDSILNDFSTSGSSAGQMGLGQEDELIHWL 1073
               F S   K ++KD      +K+ KFG ++D ILNDF  S  SA +MGL Q+D+++ WL
Sbjct: 57   SNSFPSHTPKPRDKDTGHGTNSKMGKFG-SMDFILNDFPLSVPSA-EMGLSQDDDMVPWL 114

Query: 1074 NYPLE-----DYSSEFFSELSGVNSDVHSSQNNTITIDKNNSNNQIVKDSHMVPVYSGGN 1238
            NYP++     DY S+F  ELSGV  +  S+  N  + +K NSNNQ +KDS+ +  ++G +
Sbjct: 115  NYPIDESLQHDYCSDFLQELSGVTVNELSTHCNFASGEKRNSNNQTIKDSNTISAHNGVS 174

Query: 1239 PEQGNASKVYREGHEPPRILRXXXXXXXXXXXXXTSFPSHTSRVSDFTASNTKSA-HKAP 1415
             EQGNASK    G EP R  R             T FPS  S+VSD  ++NT +A H   
Sbjct: 175  LEQGNASKASAAGVEPSR-PRSSQLYPPSSQQCQTLFPSMRSKVSDPISNNTSNAMHHTV 233

Query: 1416 FGNSTQNPTSTSRPMNSRMEKQNTG 1490
             GNS + P STS   +++ +KQ+ G
Sbjct: 234  SGNSIRLPASTSGFSSTKTQKQDPG 258


>ref|XP_006423961.1| hypothetical protein CICLE_v10027890mg [Citrus clementina]
            gi|567862616|ref|XP_006423962.1| hypothetical protein
            CICLE_v10027890mg [Citrus clementina]
            gi|568853382|ref|XP_006480339.1| PREDICTED: transcription
            factor PIF3-like [Citrus sinensis]
            gi|557525895|gb|ESR37201.1| hypothetical protein
            CICLE_v10027890mg [Citrus clementina]
            gi|557525896|gb|ESR37202.1| hypothetical protein
            CICLE_v10027890mg [Citrus clementina]
          Length = 735

 Score =  146 bits (368), Expect = 3e-32
 Identities = 99/265 (37%), Positives = 136/265 (51%), Gaps = 8/265 (3%)
 Frame = +3

Query: 714  MPYSQFHQMAKGELELTQPKLTNCSADPVFVPDHEFAELVWENGQILMQGQSNRTRKTPP 893
            MP  + +QM K +L+  + K  + S D  F P+++  ELVWENGQIL QGQS+RT+K+P 
Sbjct: 1    MPLFELYQMTKEKLDSAKQKNPSSSTDLSFEPENDLVELVWENGQILKQGQSSRTKKSPT 60

Query: 894  CTGFMSLISKDQEKDGRDTLTAKIEKFGGNVDSILNDFSTSGSSAGQMGLGQEDELIHWL 1073
                 S   +      RD    K  KF G VD++LN    S  S G+MGL Q+D+++ WL
Sbjct: 61   SNSLPSYCLRSHTPKNRDKDLGKTGKF-GTVDAMLNGIQMSDPS-GEMGLNQDDDMVPWL 118

Query: 1074 NYPL-----EDYSSEFFSELSGVNSDVHSSQNNTITIDKNNSNNQIVKDSHMVPVYSGGN 1238
            NY +     +DY S+F  ELSGV  +  SSQNN  + DK +S+NQ  ++ + V    G  
Sbjct: 119  NYAVDESLQQDYCSDFLHELSGVTGNELSSQNNFASFDKRSSSNQFDREFNSVFGNHGAR 178

Query: 1239 PEQGNASKVYREGHEPPRILR--XXXXXXXXXXXXXTSFPSHTSRVSDFTASNTK-SAHK 1409
             E GN SKV   G       R               TS P+  S VSD T++  K S   
Sbjct: 179  LEHGNVSKVSSVGGGEATRPRSSTNSVYTSSSQQCQTSLPNLRSGVSDSTSNGIKNSTDN 238

Query: 1410 APFGNSTQNPTSTSRPMNSRMEKQN 1484
              F  S  NPT+T      ++ KQ+
Sbjct: 239  GIFQGS--NPTATGNLSGLKLHKQD 261


>ref|XP_007207211.1| hypothetical protein PRUPE_ppa001899mg [Prunus persica]
            gi|462402853|gb|EMJ08410.1| hypothetical protein
            PRUPE_ppa001899mg [Prunus persica]
          Length = 744

 Score =  140 bits (354), Expect = 1e-30
 Identities = 102/277 (36%), Positives = 155/277 (55%), Gaps = 9/277 (3%)
 Frame = +3

Query: 714  MPYSQFHQMAKGELELTQPKLTNCSADPVFVPDHEFAELVWENGQILMQGQSNRTRKTPP 893
            MP S+F++MA G ++ +Q           F P ++F ELVWENGQI+MQGQS+RTRK+P 
Sbjct: 1    MPLSEFYRMA-GRVDSSQD----------FEPVNDFVELVWENGQIMMQGQSSRTRKSPT 49

Query: 894  CTGFM-SLISKDQEKDGRDTLTAKIEKFGGNVDSILNDFSTSGSSAGQMGLGQEDELIHW 1070
            C   + S   K+++KD  +   AK  KF G+V+S+L++   S  S+ +MGL ++DE++ W
Sbjct: 50   CNNSLPSYTPKNRDKDVGNGNIAKTGKF-GSVESVLDEIPLSVPSS-EMGLSEDDEMLPW 107

Query: 1071 LNYPLE-----DYSSEFFSELSGVNSDVHSSQNNTITIDKNNSNNQIVKDSHMVPVYSGG 1235
            LNY ++     +Y  EF  ELS V ++  SS +N  ++DK +S++Q+ +DS+    + G 
Sbjct: 108  LNYSIDEPLHHEYCDEFLPELSTVTANEISSNSNLASMDKRSSSSQVYRDSNTNSAHEGA 167

Query: 1236 NPEQGNASKVYR-EGHEPPRILRXXXXXXXXXXXXXTS-FPSHTSRVSDFTASNTKSA-H 1406
              EQ NA KV   +G +  R                 S FPS  SRVSD    NT +A H
Sbjct: 168  YLEQRNAPKVASIDGADVSRPRTGTSQLYPLSSQQSQSLFPSFRSRVSDIVGDNTGNATH 227

Query: 1407 KAPFGNSTQNPTSTSRPMNSRMEKQNTGPSVPPSEPS 1517
                 NSTQ  ++   P   +M++Q+  P +P +  S
Sbjct: 228  PTVCKNSTQVSSAGVFP-GIKMQRQD--PVMPSNNNS 261


>ref|XP_006358519.1| PREDICTED: transcription factor PIF3-like [Solanum tuberosum]
          Length = 716

 Score =  137 bits (346), Expect = 1e-29
 Identities = 91/262 (34%), Positives = 143/262 (54%), Gaps = 5/262 (1%)
 Frame = +3

Query: 714  MPYSQFHQMAKGELELTQPKLTNCSADPVFVPDHEFAELVWENGQILMQGQSNRTRKTPP 893
            MP S+F +MA G+LE  Q K+++ +    F P+++  EL W+NGQI+MQGQS+  +K+  
Sbjct: 1    MPLSEFLKMAIGKLESGQQKISSTTNLSSF-PENDLIELKWQNGQIVMQGQSSSAKKSTV 59

Query: 894  CTGFMSLISKDQEKDGRDTLTAKIEKFGGNVDSILNDFSTSGSSAGQMGLGQEDELIHWL 1073
               F S  S D++K   ++ T+KI KF G +D++LND S S     ++ L QEDE + WL
Sbjct: 60   HNNFQSSASGDRDKYTGNSSTSKIGKF-GLMDTMLNDMSLS-VPTDELDLIQEDEGVPWL 117

Query: 1074 NYPL-----EDYSSEFFSELSGVNSDVHSSQNNTITIDKNNSNNQIVKDSHMVPVYSGGN 1238
             YP      +DY ++   E+SGV ++  S Q+    I+K  S+++++ DSH VPV++  N
Sbjct: 118  GYPADDSLQQDYCAQLLPEISGVTANEQSRQSVFGLINKRGSSDKMIGDSHSVPVHNAVN 177

Query: 1239 PEQGNASKVYREGHEPPRILRXXXXXXXXXXXXXTSFPSHTSRVSDFTASNTKSAHKAPF 1418
             EQ N SKV       P                  S P+  S VSD  +S   +   +  
Sbjct: 178  FEQRNTSKVSPSSRFSP-------LSSLPSQKGHASIPTLESGVSDIFSSKNSNTPMSVL 230

Query: 1419 GNSTQNPTSTSRPMNSRMEKQN 1484
            G+S Q+  S     +++++KQN
Sbjct: 231  GDSNQSKASAGDVKSNKIQKQN 252


>ref|XP_006382253.1| Phytochrome-interacting factor 3 family protein [Populus trichocarpa]
            gi|550337605|gb|ERP60050.1| Phytochrome-interacting
            factor 3 family protein [Populus trichocarpa]
          Length = 742

 Score =  134 bits (338), Expect = 8e-29
 Identities = 102/269 (37%), Positives = 144/269 (53%), Gaps = 13/269 (4%)
 Frame = +3

Query: 714  MPYSQF-HQMAKGELELTQPKLTNCSADPVFV-PDHEFAELVWENGQILMQGQSNRTRKT 887
            MP S+  ++MAKG+++ +Q K  +CS D  FV P+++F EL+WENGQI    QS+R RK 
Sbjct: 1    MPLSELLYRMAKGKIDFSQEKDPSCSTDLSFVRPENDFGELIWENGQI----QSSRARKI 56

Query: 888  PPCTGFMSLISKDQEKD---GRDTLTAKIEKFGGNVDSILNDFSTSGSSAGQMGLGQEDE 1058
             PC+       K + KD   G D  T K     G ++S LN+   S   A +MG+ Q+D+
Sbjct: 57   QPCSTLPCQNPKIRYKDIGNGTDIRTGKF----GMMESTLNELPMS-VPAVEMGVNQDDD 111

Query: 1059 LIHWLNYPLE-----DYSSEFFSELSGVNSDVHSSQNNTITIDKNNSNNQIVKDSHMVPV 1223
            ++ WLNYPL+     DY SEF  ELSGV  + HSSQ+N  +  K  S +Q V+DS  V V
Sbjct: 112  MVPWLNYPLDESPQHDYCSEFLPELSGVTVNGHSSQSNFPSFGK-KSFSQSVRDSRTVSV 170

Query: 1224 YSGGNPEQGNASKVYREGHEPPRILR--XXXXXXXXXXXXXTSFPSHTSRVSDFTASNT- 1394
            ++G + EQG+ +K    G       R               TSFP   SRVS     +T 
Sbjct: 171  HNGLSLEQGDVAKNSSAGDTEANRPRTSASQLYLSSSEHCQTSFPYFRSRVSAKNGDSTS 230

Query: 1395 KSAHKAPFGNSTQNPTSTSRPMNSRMEKQ 1481
             +AH     +S + PTS     + +M+KQ
Sbjct: 231  NAAHHVVSVDSIRAPTSGGGFPSIKMQKQ 259


>ref|XP_004230368.1| PREDICTED: transcription factor PIF3-like [Solanum lycopersicum]
          Length = 723

 Score =  134 bits (337), Expect = 1e-28
 Identities = 90/262 (34%), Positives = 141/262 (53%), Gaps = 5/262 (1%)
 Frame = +3

Query: 714  MPYSQFHQMAKGELELTQPKLTNCSADPVFVPDHEFAELVWENGQILMQGQSNRTRKTPP 893
            MP S+F +MA G+ E  Q K+++ S    F P+++  EL W+NGQI+MQGQ++  +K+  
Sbjct: 1    MPLSEFLKMAIGKPESGQQKISSTSNLSSF-PENDLVELKWQNGQIVMQGQNSSAKKSTV 59

Query: 894  CTGFMSLISKDQEKDGRDTLTAKIEKFGGNVDSILNDFSTSGSSAGQMGLGQEDELIHWL 1073
                 S  S D++K   ++ T+KI KF G +DS+LND S +    G++ L QEDE + WL
Sbjct: 60   PNNLPSSASGDRDKYTGNSSTSKIGKF-GLMDSMLNDMSLT-VPTGELDLIQEDEGVPWL 117

Query: 1074 NYPL-----EDYSSEFFSELSGVNSDVHSSQNNTITIDKNNSNNQIVKDSHMVPVYSGGN 1238
             YP      +DY ++   E+SGV ++  S Q+    I+K  S+++++ DSH VPV++  N
Sbjct: 118  GYPADDSLQQDYCAQLLPEISGVTANEQSGQSVFGLINKRGSSDKMIGDSHSVPVHNAVN 177

Query: 1239 PEQGNASKVYREGHEPPRILRXXXXXXXXXXXXXTSFPSHTSRVSDFTASNTKSAHKAPF 1418
             E+ N SKV       P                  S P+  S VSD  +S   +   +  
Sbjct: 178  FERRNTSKVSPSSRFSP-------LSSLPSQKGHASIPTLESGVSDVFSSKNSNTPLSVL 230

Query: 1419 GNSTQNPTSTSRPMNSRMEKQN 1484
            G S Q+  S     ++R++KQN
Sbjct: 231  GESNQSKASAGDAKSNRIQKQN 252


>emb|CBI39676.3| unnamed protein product [Vitis vinifera]
          Length = 573

 Score =  132 bits (333), Expect = 3e-28
 Identities = 78/198 (39%), Positives = 111/198 (56%), Gaps = 5/198 (2%)
 Frame = +3

Query: 714  MPYSQFHQMAKGELELTQPKLTNCSADPVFVPDHEFAELVWENGQILMQGQSNRTRKTPP 893
            MP+S+ ++MAKG+ E  Q K  + S    F P+++F ELVWE GQI+MQGQS+R RK+P 
Sbjct: 1    MPFSELYRMAKGKPESVQQKTNDLS----FGPENDFVELVWEGGQIMMQGQSSRARKSPL 56

Query: 894  CTGFMSLISKDQEKDGRDTLTAKIEKFGGNVDSILNDFSTSGSSAGQMGLGQEDELIHWL 1073
               F S   K ++KD                        T   +  +MG  Q+D+++ WL
Sbjct: 57   SNSFPSHTPKPRDKD------------------------TGHGTNSKMG-NQDDDMVPWL 91

Query: 1074 NYPLE-----DYSSEFFSELSGVNSDVHSSQNNTITIDKNNSNNQIVKDSHMVPVYSGGN 1238
            NYP++     DY S+F  ELSGV  +  S+  N  + +K NSNNQ +KDS+ +  ++G +
Sbjct: 92   NYPIDESLQHDYCSDFLQELSGVTVNELSTHCNFASGEKRNSNNQTIKDSNTISAHNGVS 151

Query: 1239 PEQGNASKVYREGHEPPR 1292
             EQGNASK    G EP R
Sbjct: 152  LEQGNASKASAAGVEPSR 169


>ref|XP_007031281.1| Phytochrome interacting factor 3, putative isoform 4 [Theobroma
            cacao] gi|508719886|gb|EOY11783.1| Phytochrome
            interacting factor 3, putative isoform 4 [Theobroma
            cacao]
          Length = 730

 Score =  132 bits (332), Expect = 4e-28
 Identities = 98/271 (36%), Positives = 144/271 (53%), Gaps = 14/271 (5%)
 Frame = +3

Query: 714  MPYSQFHQMAKGELELTQPKLTNCSADPVFVPDHEFAELVWENGQILMQGQSNRTRKTPP 893
            MP S+ ++MA+G+L+ +Q K  +CS D  FVP+++F ELV ENGQILMQGQS++ R+ P 
Sbjct: 1    MPLSELYRMARGKLDSSQDKNPSCSTDLSFVPENDFVELVLENGQILMQGQSSKARRIPA 60

Query: 894  CTG-----FMSLISKDQEKD-GRDTLTAKIEKFGGNVDSILNDFSTSGSSAGQMGLGQED 1055
            C         S   K ++KD G      K+ KF G +DS+L++   S  SA +M L Q+D
Sbjct: 61   CNSLPSHCLPSHTPKTRDKDTGNGGTNTKMGKF-GTIDSVLSEIPMSVPSA-EMSLNQDD 118

Query: 1056 ELIHWLNYP----LEDYSSEFFSELSGVNSDVHSSQNNTITIDKNNSNNQIVKDSHMVPV 1223
            E++ WLNYP    L+   S+F  ELSGV  +  S+ +N  + D+    +Q ++DS  V +
Sbjct: 119  EVVPWLNYPVDQSLQSEYSDFLPELSGVAVNETSTHSNFASFDR---RSQSIRDSCTVSL 175

Query: 1224 YSGGNPEQGNASKV--YREGHEPPRILRXXXXXXXXXXXXXTSFPSHTSRVSDFTASNT- 1394
             +G   EQGN SKV    +G   PR                TS P   SR+ +   ++  
Sbjct: 176  NNGAVFEQGNPSKVPTPADGEARPR-SGTSQLSTLPSQLCQTSSPFLRSRILENIGNSLG 234

Query: 1395 -KSAHKAPFGNSTQNPTSTSRPMNSRMEKQN 1484
              S H A  G+S     S       +M+KQ+
Sbjct: 235  HTSTHHAIGGDSIGVQASDGGLPGIKMQKQD 265


>ref|XP_007031280.1| Phytochrome interacting factor 3, putative isoform 3 [Theobroma
            cacao] gi|508719885|gb|EOY11782.1| Phytochrome
            interacting factor 3, putative isoform 3 [Theobroma
            cacao]
          Length = 709

 Score =  132 bits (332), Expect = 4e-28
 Identities = 98/271 (36%), Positives = 144/271 (53%), Gaps = 14/271 (5%)
 Frame = +3

Query: 714  MPYSQFHQMAKGELELTQPKLTNCSADPVFVPDHEFAELVWENGQILMQGQSNRTRKTPP 893
            MP S+ ++MA+G+L+ +Q K  +CS D  FVP+++F ELV ENGQILMQGQS++ R+ P 
Sbjct: 1    MPLSELYRMARGKLDSSQDKNPSCSTDLSFVPENDFVELVLENGQILMQGQSSKARRIPA 60

Query: 894  CTG-----FMSLISKDQEKD-GRDTLTAKIEKFGGNVDSILNDFSTSGSSAGQMGLGQED 1055
            C         S   K ++KD G      K+ KF G +DS+L++   S  SA +M L Q+D
Sbjct: 61   CNSLPSHCLPSHTPKTRDKDTGNGGTNTKMGKF-GTIDSVLSEIPMSVPSA-EMSLNQDD 118

Query: 1056 ELIHWLNYP----LEDYSSEFFSELSGVNSDVHSSQNNTITIDKNNSNNQIVKDSHMVPV 1223
            E++ WLNYP    L+   S+F  ELSGV  +  S+ +N  + D+    +Q ++DS  V +
Sbjct: 119  EVVPWLNYPVDQSLQSEYSDFLPELSGVAVNETSTHSNFASFDR---RSQSIRDSCTVSL 175

Query: 1224 YSGGNPEQGNASKV--YREGHEPPRILRXXXXXXXXXXXXXTSFPSHTSRVSDFTASNT- 1394
             +G   EQGN SKV    +G   PR                TS P   SR+ +   ++  
Sbjct: 176  NNGAVFEQGNPSKVPTPADGEARPR-SGTSQLSTLPSQLCQTSSPFLRSRILENIGNSLG 234

Query: 1395 -KSAHKAPFGNSTQNPTSTSRPMNSRMEKQN 1484
              S H A  G+S     S       +M+KQ+
Sbjct: 235  HTSTHHAIGGDSIGVQASDGGLPGIKMQKQD 265


>ref|XP_007031279.1| Phytochrome interacting factor 3, putative isoform 2 [Theobroma
            cacao] gi|508719884|gb|EOY11781.1| Phytochrome
            interacting factor 3, putative isoform 2 [Theobroma
            cacao]
          Length = 731

 Score =  132 bits (332), Expect = 4e-28
 Identities = 98/271 (36%), Positives = 144/271 (53%), Gaps = 14/271 (5%)
 Frame = +3

Query: 714  MPYSQFHQMAKGELELTQPKLTNCSADPVFVPDHEFAELVWENGQILMQGQSNRTRKTPP 893
            MP S+ ++MA+G+L+ +Q K  +CS D  FVP+++F ELV ENGQILMQGQS++ R+ P 
Sbjct: 1    MPLSELYRMARGKLDSSQDKNPSCSTDLSFVPENDFVELVLENGQILMQGQSSKARRIPA 60

Query: 894  CTG-----FMSLISKDQEKD-GRDTLTAKIEKFGGNVDSILNDFSTSGSSAGQMGLGQED 1055
            C         S   K ++KD G      K+ KF G +DS+L++   S  SA +M L Q+D
Sbjct: 61   CNSLPSHCLPSHTPKTRDKDTGNGGTNTKMGKF-GTIDSVLSEIPMSVPSA-EMSLNQDD 118

Query: 1056 ELIHWLNYP----LEDYSSEFFSELSGVNSDVHSSQNNTITIDKNNSNNQIVKDSHMVPV 1223
            E++ WLNYP    L+   S+F  ELSGV  +  S+ +N  + D+    +Q ++DS  V +
Sbjct: 119  EVVPWLNYPVDQSLQSEYSDFLPELSGVAVNETSTHSNFASFDR---RSQSIRDSCTVSL 175

Query: 1224 YSGGNPEQGNASKV--YREGHEPPRILRXXXXXXXXXXXXXTSFPSHTSRVSDFTASNT- 1394
             +G   EQGN SKV    +G   PR                TS P   SR+ +   ++  
Sbjct: 176  NNGAVFEQGNPSKVPTPADGEARPR-SGTSQLSTLPSQLCQTSSPFLRSRILENIGNSLG 234

Query: 1395 -KSAHKAPFGNSTQNPTSTSRPMNSRMEKQN 1484
              S H A  G+S     S       +M+KQ+
Sbjct: 235  HTSTHHAIGGDSIGVQASDGGLPGIKMQKQD 265


>ref|XP_007031278.1| Phytochrome interacting factor 3, putative isoform 1 [Theobroma
            cacao] gi|508719883|gb|EOY11780.1| Phytochrome
            interacting factor 3, putative isoform 1 [Theobroma
            cacao]
          Length = 729

 Score =  132 bits (332), Expect = 4e-28
 Identities = 98/271 (36%), Positives = 144/271 (53%), Gaps = 14/271 (5%)
 Frame = +3

Query: 714  MPYSQFHQMAKGELELTQPKLTNCSADPVFVPDHEFAELVWENGQILMQGQSNRTRKTPP 893
            MP S+ ++MA+G+L+ +Q K  +CS D  FVP+++F ELV ENGQILMQGQS++ R+ P 
Sbjct: 1    MPLSELYRMARGKLDSSQDKNPSCSTDLSFVPENDFVELVLENGQILMQGQSSKARRIPA 60

Query: 894  CTG-----FMSLISKDQEKD-GRDTLTAKIEKFGGNVDSILNDFSTSGSSAGQMGLGQED 1055
            C         S   K ++KD G      K+ KF G +DS+L++   S  SA +M L Q+D
Sbjct: 61   CNSLPSHCLPSHTPKTRDKDTGNGGTNTKMGKF-GTIDSVLSEIPMSVPSA-EMSLNQDD 118

Query: 1056 ELIHWLNYP----LEDYSSEFFSELSGVNSDVHSSQNNTITIDKNNSNNQIVKDSHMVPV 1223
            E++ WLNYP    L+   S+F  ELSGV  +  S+ +N  + D+    +Q ++DS  V +
Sbjct: 119  EVVPWLNYPVDQSLQSEYSDFLPELSGVAVNETSTHSNFASFDR---RSQSIRDSCTVSL 175

Query: 1224 YSGGNPEQGNASKV--YREGHEPPRILRXXXXXXXXXXXXXTSFPSHTSRVSDFTASNT- 1394
             +G   EQGN SKV    +G   PR                TS P   SR+ +   ++  
Sbjct: 176  NNGAVFEQGNPSKVPTPADGEARPR-SGTSQLSTLPSQLCQTSSPFLRSRILENIGNSLG 234

Query: 1395 -KSAHKAPFGNSTQNPTSTSRPMNSRMEKQN 1484
              S H A  G+S     S       +M+KQ+
Sbjct: 235  HTSTHHAIGGDSIGVQASDGGLPGIKMQKQD 265


>ref|XP_002319450.2| hypothetical protein POPTR_0013s00310g [Populus trichocarpa]
            gi|550324617|gb|EEE95373.2| hypothetical protein
            POPTR_0013s00310g [Populus trichocarpa]
          Length = 713

 Score =  130 bits (328), Expect = 1e-27
 Identities = 101/271 (37%), Positives = 141/271 (52%), Gaps = 10/271 (3%)
 Frame = +3

Query: 714  MPYSQF-HQMAKGELELTQPKLTNCSADPVFVPDHEFAELVWENGQILMQGQSNRTRKTP 890
            MP S+  ++MAKG+ + +Q K   CS D  FVP+++F EL+WENGQI    Q +R RK  
Sbjct: 1    MPLSELLYRMAKGKTDSSQEKNPACSTDLSFVPENDFGELIWENGQI----QYSRARKIQ 56

Query: 891  PCTGFMSLISKDQEKDGRDTLTAKIEKFGGNVDSILNDFSTSGSSAGQMGLGQEDELIHW 1070
             C    SL  K ++KD  +    K  KF G ++S LN+       A ++   Q+D+++ W
Sbjct: 57   TCN---SLPPKIRDKDIGNGTNTKTGKF-GTMESTLNEL--LAVPAVEVRANQDDDMVPW 110

Query: 1071 LNYPLE-----DYSSEFFSELSGVNSDVHSSQNNTITIDKNNSNNQIVKDSHMVPVYSGG 1235
            LNYPL+     DY S+F  ELSGV  + HSSQ+N  + DK  S NQ + DSH V V++G 
Sbjct: 111  LNYPLDEPLQHDYCSDFLPELSGVTVNEHSSQSNFPSFDK-RSCNQSITDSHTVSVHNGL 169

Query: 1236 NPEQGNASKVYREGH---EPPRILRXXXXXXXXXXXXXTSFPSHTSRVSDFTASNTKSA- 1403
            N EQG+       G    + PR                TSFP   SR S     +T +A 
Sbjct: 170  NLEQGDVVMNSSAGDIDAKRPR-TSASQLYPSSSEQCKTSFPFFRSRDSTKKDDSTSNAV 228

Query: 1404 HKAPFGNSTQNPTSTSRPMNSRMEKQNTGPS 1496
            H     +S + PTS     + +M+KQ   PS
Sbjct: 229  HHVIAPDSIRAPTSGGGFPSIKMQKQVPAPS 259


>gb|AEX32796.1| phytochrome-interacting factor 3 [Malus domestica]
          Length = 713

 Score =  126 bits (316), Expect = 3e-26
 Identities = 84/256 (32%), Positives = 134/256 (52%), Gaps = 8/256 (3%)
 Frame = +3

Query: 714  MPYSQFHQMAKGELELTQPKLTNCSADPVFVPDHEFAELVWENGQILMQGQSNRTRKTPP 893
            MP+S+ ++MA G ++ +Q              +++F ELVWENGQ++MQGQS+RTRK P 
Sbjct: 1    MPFSELYRMA-GRVDSSQDF------------ENDFLELVWENGQVVMQGQSSRTRKNPS 47

Query: 894  CTGFMSL-ISKDQEKDGRDTLTAKIEKFGGNVDSILNDFSTSGSSAGQMGLGQEDELIHW 1070
            C    S    K++++D  ++   K  KFG  VDS L++   S  S+ +MGL ++D+ + W
Sbjct: 48   CNTLPSYNTPKNRDRDVGNSNIGKTGKFGFVVDSELDEIPLSVPSS-EMGLSEDDDTLPW 106

Query: 1071 LNYPLE-----DYSSEFFSELSGVNSDVHSSQNNTITIDKNNSNNQIVKDSHMVPVYSGG 1235
            LNY ++     +Y  +F  E S   ++  SS +N  +IDK +S++Q+++DS+    +   
Sbjct: 107  LNYSIDEPLHHEYCHDFLPEFSSATANEASSNHNLASIDKRSSSSQVLRDSNPNSAHEDA 166

Query: 1236 NPEQGNASKVYREGHEPPRILRXXXXXXXXXXXXXT--SFPSHTSRVSDFTASNTKSAHK 1409
              +Q N  KV   G       R             +  S+PS  SRVSD    NT + H+
Sbjct: 167  CLQQRNVGKVALIGRADVSRPRTGTSQLHSLSSQQSQASYPSFRSRVSDTAGDNTSATHR 226

Query: 1410 APFGNSTQNPTSTSRP 1457
                NSTQ  ++   P
Sbjct: 227  DVGKNSTQISSAGGSP 242


>gb|EXB57555.1| hypothetical protein L484_022662 [Morus notabilis]
          Length = 758

 Score =  119 bits (299), Expect = 3e-24
 Identities = 93/281 (33%), Positives = 133/281 (47%), Gaps = 16/281 (5%)
 Frame = +3

Query: 714  MPYSQFHQMAKGELELTQPKLTNCSADPVFVPDHEFAELVWENGQILMQGQSNRTRKTPP 893
            MP S+ +++AK  ++  Q           F   ++  ELVWENGQI  QGQS+R RK P 
Sbjct: 1    MPLSELYRLAKRRVDSNQD----------FENGNDVFELVWENGQITTQGQSSRVRKEPT 50

Query: 894  CTG-----FMSLISKDQEKDGRDTLTAKIEKFGGNVDSILNDFSTSGSSAGQMGLGQEDE 1058
            C         S   K ++KD  +  T K  KF G VDS+LN+   S  S G +GL  +D+
Sbjct: 51   CNSLPSHCLPSYTPKSRDKDLGNGTTTKTGKF-GTVDSVLNEIPMSVPSDG-VGLSHDDD 108

Query: 1059 LIHWLNYPLE-----DYSSEFFSELSGVNSDVHSSQNNTITIDKNNSNNQIVKDSHMVPV 1223
            ++ WLNYP++     +Y  +F  ELSGV  +  S  NN    +  +S NQ+ ++S+   V
Sbjct: 109  MMPWLNYPMDGSLQHEYCRDFLPELSGVTVNEISKSNNNFATNDKSSCNQLYRESNANSV 168

Query: 1224 -YSGGNPEQGNASK----VYREGHEPPRILRXXXXXXXXXXXXXTSFPSHTSRVSDFTAS 1388
             Y     ++ N+SK    V  +    PR                 SFPS  SRV D    
Sbjct: 169  DYCASLEQRNNSSKVGSVVASDVSTRPRTGTSQLYSSSSSQQCQASFPSFRSRVLDTVGD 228

Query: 1389 NTKS-AHKAPFGNSTQNPTSTSRPMNSRMEKQNTGPSVPPS 1508
            NT S AH A   +S +  +    P    ++  N   S+PPS
Sbjct: 229  NTTSAAHHAVCNDSGRVSSVGGFP---SLKMHNRQDSIPPS 266


>ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
            gi|223548548|gb|EEF50039.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 758

 Score =  113 bits (283), Expect = 2e-22
 Identities = 95/273 (34%), Positives = 140/273 (51%), Gaps = 17/273 (6%)
 Frame = +3

Query: 714  MPYSQFH-QMAKGELELT-QPKLTNCSADPVFVPDHEFAELVWENGQILMQGQSNRTRKT 887
            MP S+   +++KG+ + + Q K T CS D    P+++F ELVWENGQI    QS+R RK 
Sbjct: 1    MPLSELICRLSKGKFDSSSQEKNTTCSTDLSAGPENDFLELVWENGQI----QSSRARKI 56

Query: 888  PPCTGFMSLISKDQEKD-------GRDTLTAKIEKFGGNVDSILNDFSTSGSSAGQMGLG 1046
                G  S  SK ++KD       G +T   K+ +FG  +D  L++   S  S  +MGL 
Sbjct: 57   --SNGVQSQTSKFRDKDISIGIGNGNNT---KMGRFGA-MDFGLDEVPMSVPSV-EMGLN 109

Query: 1047 QEDELIHWLNYPL-----EDYSSEFFSELSGVNSDVHSSQNNTITIDKNNSNNQIVKDSH 1211
            QED+++ WLN P+     +DY  EF +ELSGV  + H +QN+  + DK  + NQ V+DSH
Sbjct: 110  QEDDMVPWLNDPIDDSLQQDYCHEFLAELSGVTVNEH-AQNSFASSDKKCNGNQSVRDSH 168

Query: 1212 MVPVYSGGNPEQGNASKVY--REGHEPPRILRXXXXXXXXXXXXXTSFPSHTSRVSDFTA 1385
               V++G + EQG+  +V   R+G                      SFP   SR+S   A
Sbjct: 169  TASVHNGLSLEQGHMPRVSSGRDGDATRSRTTASQLYSSSVQQCQASFPHFRSRISANNA 228

Query: 1386 SNT-KSAHKAPFGNSTQNPTSTSRPMNSRMEKQ 1481
             +T  S H A  G+  +   S     + + +KQ
Sbjct: 229  ESTNNSTHVASSGDPIRGSPSGGGFPSIKAQKQ 261


>ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
            gi|449522990|ref|XP_004168508.1| PREDICTED: transcription
            factor PIF3-like [Cucumis sativus]
          Length = 696

 Score =  112 bits (280), Expect = 4e-22
 Identities = 97/284 (34%), Positives = 145/284 (51%), Gaps = 16/284 (5%)
 Frame = +3

Query: 714  MPYSQFHQMAKGELELTQPKLTNCSADPVFVPDHEFAELVWENGQILMQGQSNRTRK--- 884
            MP S+ +++A+G+L+ TQ K    S + VF       ELVWENGQIL+QGQSNR RK   
Sbjct: 1    MPLSELYRVARGKLDSTQDKN---SMNDVF-------ELVWENGQILLQGQSNRPRKNSN 50

Query: 885  --TPPCTGFMSLISKDQEKDGRDTLTAKIEKFGGNVDSILND-FSTSGSSAGQMGLGQED 1055
              T       S   +D+++D      AK+ KFG  +DS++ D  ST+ S   ++    +D
Sbjct: 51   LNTSQAQCLPSHSPRDRDRDVGYFNNAKMGKFGA-IDSVVRDVMSTAPSPDVELAHDDDD 109

Query: 1056 ELIHWLNYPLE-----DYSSEFFSELSGVNSDVHSSQNN-TITIDKNNSNNQI--VKDSH 1211
            +++ WL+YPL+     DYSS+F  ELSGV  +   S+N+   +I K +  NQ+   +D H
Sbjct: 110  DMVPWLSYPLDGHLQHDYSSDFLPELSGVTVNDFPSRNSIASSIGKASGGNQVNRERDMH 169

Query: 1212 MVPVYSGGNPEQGNASKVYREGHEPPRI-LRXXXXXXXXXXXXXTSFPSHTSRVSDFTAS 1388
            +  ++ G N E GN SK+        R                 TSFP   ++ +  T +
Sbjct: 170  LNSMH-GANLEDGNISKLSSLDVSAARARSSTNQLHSSASQQSQTSFPHLRTKCAGETEN 228

Query: 1389 NT-KSAHKAPFGNSTQNPTSTSRPMNSRMEKQNTGPSVPPSEPS 1517
             T K  H +  G+S Q P   S   +S + KQ   P+ PP+  S
Sbjct: 229  TTGKMLHDSLVGHSPQVPLIAS--SSSSIAKQKLDPT-PPNNSS 269


>ref|XP_004302325.1| PREDICTED: transcription factor PIF3-like [Fragaria vesca subsp.
            vesca]
          Length = 710

 Score =  109 bits (273), Expect = 3e-21
 Identities = 83/237 (35%), Positives = 120/237 (50%), Gaps = 9/237 (3%)
 Frame = +3

Query: 801  FVPDHEFAELVWENGQILMQGQSNRTRKTPPCTGFMSLISKDQEKDGRDTLTAKIEKFGG 980
            F P  +  ELVWENGQI+MQ QSNR RK+P      S   +++++D  +    K+ KF G
Sbjct: 18   FEPLSDLVELVWENGQIMMQSQSNRARKSPTFNSLPSHTPRNRDRDLGNGSNGKMGKF-G 76

Query: 981  NVDSILNDFSTSGSSAGQMGLGQEDELIHWLNYPLE-----DYSSEFFSELSGVNSDVHS 1145
            +V+S++++   S  S G+MGL  +D+++ WLNY L+     +YS +F  E+S V ++  S
Sbjct: 77   SVNSVIDEIPLSVPS-GEMGLSDDDDMLPWLNYALDQPLQHEYSHDFMPEISDVTANEIS 135

Query: 1146 SQNNTITIDKNNSNNQIVKDSHMVPVYSGGNPEQGNASK---VYREGHEPPRILRXXXXX 1316
            +  N   IDK +S++Q+ ++S+     S    EQ N SK   V       PR        
Sbjct: 136  TNGNLTPIDKRSSSSQMYRESN---TNSTPGLEQRNVSKLSSVSAAEASRPR-TSTTHLY 191

Query: 1317 XXXXXXXXTSFPSHTSRVSDFTASNTKS-AHKAPFGNSTQNPTSTSRPMNSRMEKQN 1484
                     S PS  S  SD    NT S AH A   NS Q   +   P    M+KQN
Sbjct: 192  QMSSQQPQASIPSLRSIASDMVGGNTSSAAHHAVCKNSIQASPAGGFP-GIPMQKQN 247


>ref|XP_006840391.1| hypothetical protein AMTR_s00045p00141060 [Amborella trichopoda]
            gi|548842109|gb|ERN02066.1| hypothetical protein
            AMTR_s00045p00141060 [Amborella trichopoda]
          Length = 781

 Score =  107 bits (267), Expect = 1e-20
 Identities = 84/244 (34%), Positives = 121/244 (49%), Gaps = 11/244 (4%)
 Frame = +3

Query: 807  PDHEFAELVWENGQILMQGQSNRTRKTPPCTGFMSLISKDQ-EKDGRDTLTAKIEKFG-- 977
            PDHEF EL+WENGQI++QGQ++R RK    +G+ S   K     +  D +     K G  
Sbjct: 110  PDHEFVELLWENGQIVLQGQTSRNRKDASSSGYSSHPPKTHLNHNSGDAVLPVASKGGRY 169

Query: 978  GNVDSILNDFSTSGSSAGQMGLGQEDELIHWLNYPLE-----DYSSEFFSELSGVNSDVH 1142
            G ++S+L+DFS SG ++G   L QEDE++ WLNYPL+     DY SEFF ELSGVN    
Sbjct: 170  GTLESVLHDFS-SGQASG-CPLVQEDEMVPWLNYPLDDSLERDYCSEFFPELSGVNLTPL 227

Query: 1143 SSQNNTITIDKNNSNNQIVKDSHMVPVYSGGNPEQGNASKVY--REGHEPPRILRXXXXX 1316
            S   N +  +K   N       ++   +S   P +  A + +  ++G     ILR     
Sbjct: 228  SKPTNVVVSEK-ACNLDTTSHKNLSMEHSSQAPSRLRALQPFNSQQGQPSNPILR----- 281

Query: 1317 XXXXXXXXTSFPSHTSRVSDFTASNTKSAHKAPFGNSTQNPTSTS-RPMNSRMEKQNTGP 1493
                      FPS+T              HK+  GNS+    + +   +NS+ E+ N G 
Sbjct: 282  ---------QFPSNT--------------HKSSCGNSSSPGANPAIGIVNSKTEQPNHGS 318

Query: 1494 SVPP 1505
            + PP
Sbjct: 319  TRPP 322



 Score = 86.3 bits (212), Expect = 3e-14
 Identities = 46/101 (45%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
 Frame = +3

Query: 738  MAKGELELTQPKLTNCSADPVFVPDHEFAELVWENGQILMQGQSNRTRKTPPCTGFMSLI 917
            M K + +  QPK+TNCS D  FVPDHEF EL+WENGQI++QGQ++R RK    +G+ S  
Sbjct: 1    MTKEKWDFAQPKMTNCSTDLAFVPDHEFVELLWENGQIVLQGQTSRNRKDASSSGYSSHP 60

Query: 918  SKDQ-EKDGRDTLTAKIEKFG--GNVDSILNDFSTSGSSAG 1031
             K     +  D +     K G  G ++S+L+DFS SG ++G
Sbjct: 61   PKTHLNHNSGDAVLPVASKGGRYGTLESVLHDFS-SGQASG 100


>ref|XP_003591255.1| Transcription factor PIF3 [Medicago truncatula]
            gi|355480303|gb|AES61506.1| Transcription factor PIF3
            [Medicago truncatula]
          Length = 555

 Score =  100 bits (249), Expect = 2e-18
 Identities = 91/289 (31%), Positives = 146/289 (50%), Gaps = 32/289 (11%)
 Frame = +3

Query: 714  MPYSQFHQMAKGELELTQPKLTNCS--ADPVFVPDHEFAELVWENGQILMQGQSNRTRKT 887
            MP  + +++A+ +L+      TN +  AD    P+++F ELVWE+GQI  QGQS+R RK+
Sbjct: 1    MPLYELYRLAREKLD----NETNGTSVADQPSSPENDFFELVWESGQISSQGQSSRGRKS 56

Query: 888  PPCTGFMSLI-------SKDQEKD---GRDTLTAKIEKFGGNVDSILNDFSTSGSSAGQM 1037
            P C    S          +D++KD   G      KI KF G++DS LN+   S  S    
Sbjct: 57   PSCRSLPSHCLPSHSPRGRDKDKDVGGGFSNNNPKIGKF-GDLDSGLNEIPMSVPSR--- 112

Query: 1038 GLGQEDELIHWLNYPLE-----DYSSEFFSELSGVNSDVHSSQNNTITIDKNNSNNQIVK 1202
               + DE++ WL+Y ++     +Y S+FF EL+   +D+ +S + T+ +DK N+ NQI +
Sbjct: 113  ---EVDEMMPWLDYSMDGSLQHEYGSDFFHELT--ENDLPASNSFTL-LDKRNNGNQIFR 166

Query: 1203 DSH-----MVPVYSGGNPEQ--------GNASKVYREGHEPPRILRXXXXXXXXXXXXXT 1343
            DSH      + V  G + EQ         +AS++Y     PP                 T
Sbjct: 167  DSHKNSAEAMNVSKGSSAEQVVETARHKASASQLY-----PP-----------SSNQCQT 210

Query: 1344 SFPSHTSRVSDFTASNTKSA--HKAPFGNSTQNPTSTSRPMNSRMEKQN 1484
            +  +  SR SD T +N  S+     P+G+ T+ P+S+S   + + +KQ+
Sbjct: 211  TSVTVRSRASDITENNNVSSGNQDVPYGDITRIPSSSSDFSSLKAQKQD 259