BLASTX nr result

ID: Akebia22_contig00012636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00012636
         (2200 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma...   269   5e-69
ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citr...   240   2e-60
ref|XP_006438858.1| hypothetical protein CICLE_v10030535mg [Citr...   240   2e-60
ref|XP_006438857.1| hypothetical protein CICLE_v10030535mg [Citr...   240   2e-60
emb|CBI35661.3| unnamed protein product [Vitis vinifera]              239   5e-60
ref|XP_007043830.1| RNA polymerase II C-terminal domain phosphat...   238   9e-60
gb|EXB81217.1| RNA polymerase II C-terminal domain phosphatase-l...   236   3e-59
ref|XP_004310239.1| PREDICTED: RNA polymerase II C-terminal doma...   209   3e-51
ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Popu...   208   9e-51
ref|XP_002297869.2| CTD phosphatase-like protein 3 [Populus tric...   205   6e-50
ref|XP_004157633.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   197   1e-47
ref|XP_004140651.1| PREDICTED: RNA polymerase II C-terminal doma...   197   1e-47
ref|XP_002304714.2| hypothetical protein POPTR_0003s16280g [Popu...   175   9e-41
ref|XP_007225412.1| hypothetical protein PRUPE_ppa000589mg [Prun...   174   2e-40
ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal doma...   172   4e-40
ref|XP_007139315.1| hypothetical protein PHAVU_008G019000g [Phas...   171   1e-39
ref|XP_004492029.1| PREDICTED: RNA polymerase II C-terminal doma...   168   1e-38
ref|XP_004492028.1| PREDICTED: RNA polymerase II C-terminal doma...   168   1e-38
ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal doma...   165   7e-38
gb|AAV92930.1| putative transcription regulator CPL1 [Solanum ly...   165   7e-38

>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Vitis vinifera]
          Length = 1238

 Score =  269 bits (687), Expect = 5e-69
 Identities = 244/751 (32%), Positives = 359/751 (47%), Gaps = 54/751 (7%)
 Frame = +1

Query: 106  EKETLVFMEKVGSLVQVIEEGDISXXXXXXXXXXXXXXFIQEAKVISKSKPKGDPRVWME 285
            EKE  + M      ++ +EEG+IS                QE +V+ ++KPK D RVW  
Sbjct: 3    EKENNIMMG-----IEDVEEGEISDSASVEEISEEDFNK-QEVRVLREAKPKADTRVWTM 56

Query: 286  GFL------------------NYSVSSVMRD------FESDEKSKLHSSNVLMNNREDNN 393
              L                  N + +  +++      F  D++    SS+    +R+D++
Sbjct: 57   RDLQDLYKYHQACSGYTPRLYNLAWAQAVQNKPLNDIFVMDDEESKRSSSSSNTSRDDSS 116

Query: 394  ASLYSKKEVCXXXXXXXXXXXXTRMXXXXXXXXXXXXXXXXXXXXXSPIVEKVEEEGIWV 573
                S KEV              +M                       + +   E G+  
Sbjct: 117  ----SAKEVAKVIIDDSGDEMDVKMDDVSEKEEGELEEGEIDLDSEPDVKD---EGGVLD 169

Query: 574  VSSDR-NLQIRELEMKIKSIREALDTATVKDPKESYNEVCSRFRISLESLQLMRLD---- 738
            V+    +L+ REL  ++KSI+E L++ TV + ++S++ VCSR + +L SLQ +  +    
Sbjct: 170  VNEPEIDLKERELVERVKSIQEDLESVTVIEAEKSFSGVCSRLQNTLGSLQKVFGEKVVG 229

Query: 739  -NCVPVVDALIQQIFMGIQAVNSVFYSMNPEQQEQDKDILLRLLTYVKDQDFALFASKQK 915
             + VP  DAL QQ+   I+A+N VF SMN  Q+E +KD+  RLL+ V+  D  +F+ +  
Sbjct: 230  ESSVPTKDALAQQLINAIRALNHVFCSMNSNQKELNKDVFSRLLSCVECGDSPIFSIQHI 289

Query: 916  KEIEAMIRCXXXXXXXXXXXXXXXXXXMDKKKERGVINGMKLNGLGNLDEDPSGHSLNST 1095
            KE+E M+                     DK  +  V +GM  N L +  E  SG +  S 
Sbjct: 290  KEVEVMM------SFLDTPAAQSSAEASDKVNDVQVTDGMNRNILDSSVES-SGRAFASA 342

Query: 1096 KKFHLEPVSVQ-YRDQNDSNMEFKTLKSKGYGGVGS-LNLPSDHDGDR----TLDTLQLF 1257
            KK  L+ +SV+ Y   N   ++     S+G    G  L+L  DHD D     T    Q F
Sbjct: 343  KKLSLDSISVESYNQNNPDALKPGLSSSRGRFIFGPLLDLHKDHDEDSLPSPTGKAPQCF 402

Query: 1258 PIQNQSDSATCTVSDKTEDAAVLPYETDALRAVSTYQQRFN-SSFLLSNQLPSPTPSVEC 1434
            P+ N+S+  T  V+ +T+D+ + PYETDAL+AVSTYQQ+F  +SFL  ++LPSPTPS E 
Sbjct: 403  PV-NKSELVTAKVAHETQDSIMHPYETDALKAVSTYQQKFGLTSFLPIDKLPSPTPSEES 461

Query: 1435 DDQDRDSSGEVSISSTASSIKTENPSVPVQPFTYATPIVDCSSKQESIPAKTGQL---GS 1605
             D   D SGEVS SST S+  T N      P   + P +D S  Q     +   L   G 
Sbjct: 462  GDTYGDISGEVSSSSTISAPITANAPALGHPIVSSAPQMDSSIVQGPTVGRNTSLVSSGP 521

Query: 1606 CLNPILKAMPKSKDPR--------RALDLKQQSLTVDYNVPKSEPIVGTMCSRKHKIVEE 1761
             L+  + A  KS+DPR         +LDL ++ L    N PK +P+   + SRK K  EE
Sbjct: 522  HLDSSVVASAKSRDPRLRLASSDAGSLDLNERPLPAVSNSPKVDPLGEIVSSRKQKSAEE 581

Query: 1762 SVLDGHNLKRQRNGLTSSEVPVSRNEQMASRNDRWFGSGCSALPQHNDYKTCLAENMRTD 1941
             +LDG   KRQRNGLTS      R+ Q    +  W     + +PQ  + +  L EN  TD
Sbjct: 582  PLLDGPVTKRQRNGLTSP--ATVRDAQTVVASGGWLEDSNTVIPQMMN-RNQLIENTGTD 638

Query: 1942 FRKLENGKFYSGKRQD---TNSAGNQQLPVFGTNTFVSLPS-LKDISMNPTMLVNLI--M 2103
             +KLE+    +G   D       GN+ LPV  T+T  SL S LKDI++NP + +N+   +
Sbjct: 639  PKKLESKVTVTGIGCDKPYVTVNGNEHLPVVATSTTASLQSLLKDIAVNPAVWMNIFNKV 698

Query: 2104 EQQKLVADTQQKPAQSMTLPSISSVAIGTVP 2196
            EQQK        PA++  LP  S+  +G VP
Sbjct: 699  EQQK-----SGDPAKNTVLPPTSNSILGVVP 724


>ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
            gi|568858958|ref|XP_006483010.1| PREDICTED: RNA
            polymerase II C-terminal domain phosphatase-like 3-like
            [Citrus sinensis] gi|557541056|gb|ESR52100.1|
            hypothetical protein CICLE_v10030535mg [Citrus
            clementina]
          Length = 1234

 Score =  240 bits (612), Expect = 2e-60
 Identities = 211/571 (36%), Positives = 297/571 (52%), Gaps = 52/571 (9%)
 Frame = +1

Query: 595  QIRELEMK---IKSIREALDTATVKDPKESYNEVCSRFRISLESLQLMRLDNCVPVVDAL 765
            Q++E EMK   ++SIREAL++    D   S+  VCS+   +LESL+ +  +N VP  DAL
Sbjct: 166  QVKE-EMKLINVESIREALESVLRGDI--SFEGVCSKLEFTLESLRELVNENNVPTKDAL 222

Query: 766  IQQIFMGIQAVNSVFYSMNPEQQEQDKDILLRLLTYVKDQDFALFASKQKKEIEAMIRCX 945
            IQ  F  +Q+V+SVF SMN   +EQ+K+IL RLL+ +K  +  LF+S Q KE+EAM+   
Sbjct: 223  IQLAFSAVQSVHSVFCSMNHVLKEQNKEILSRLLSVIKSHEPPLFSSNQIKEMEAMLSSL 282

Query: 946  XXXXXXXXXXXXXXXXXMDKKKERGVINGMKLNGL-GNLDEDPSGHSLNSTKKFHLEPVS 1122
                              DK+K+   ++G  +NG   N+  + + + LN  +K  L PV 
Sbjct: 283  VTRAN-------------DKEKDMLAMHG--VNGKDSNIVTENAVNDLNFKEKVPL-PV- 325

Query: 1123 VQYRDQNDSNMEFKTLKSK-----GYGGVGSLNLP-----SDHDGDR----TLDTLQLFP 1260
                   DS M+ K L++      GY   G L LP       HD D     T +T    P
Sbjct: 326  -------DSLMQNKPLEASKPGPPGYRSRGVL-LPLLDPHKVHDVDSLPSPTRETTPSVP 377

Query: 1261 IQN---------QSDSATCTVSDKTEDAAVLPYETDALRAVSTYQQRF-NSSFLLSNQLP 1410
            +Q          +S +A   +S   E      YETDALRA S+YQQ+F  +SF ++++LP
Sbjct: 378  VQRALVVGDGVVKSWAAAAKLSHNAEVHKTPHYETDALRAFSSYQQKFGRNSFFMNSELP 437

Query: 1411 SPTPSVECDDQDRDSSGEVSISSTASSIKTEN------PSVPVQPFTYATPIVDCSSKQ- 1569
            SPTPS E  D D D+ GE+S ++     K  N        V  QP   + P +D SS Q 
Sbjct: 438  SPTPSEESGDGDGDTGGEISSATAVDQPKPVNMPTLGQQPVSSQPMDISQP-MDISSVQA 496

Query: 1570 -----ESIPAKTGQLGSCL-NPILKAMPKSKDPR------RALDLKQQSLTVDYNVPKSE 1713
                  S PA +G       NP++KA  KS+DPR       AL+L  Q   + +N PK E
Sbjct: 497  LTTANNSAPASSGYNPVVKPNPVVKAPIKSRDPRLRFASSNALNLNHQPAPILHNAPKVE 556

Query: 1714 PIVGTMCSRKHKIVEESVLDGHNLKRQRNGLTSSEVPVSRNEQMASRNDRWFGSGCSALP 1893
            P+   M SRK K VEE VLDG  LKRQRNG  +S   V R+E+    +  W        P
Sbjct: 557  PVGRVMSSRKQKTVEEPVLDGPALKRQRNGFENS--GVVRDEKNIYGSGGWLEDTDMFEP 614

Query: 1894 QHNDYKTCLAENMRTDFRKLENGKF--YSGKRQDTNSAGNQQLPVFGTNTFVSLPS-LKD 2064
            Q  + +  L ++  ++ RKL+NG     +    +   +GN+  P    +T VSLP+ LKD
Sbjct: 615  QIMN-RNLLVDSAESNSRKLDNGATSPITSGTPNVVVSGNEPAPATTPSTTVSLPALLKD 673

Query: 2065 ISMNPTMLVNLIM--EQQKLVADTQQKPAQS 2151
            I++NPTML+N++   +QQKL AD QQK   S
Sbjct: 674  IAVNPTMLLNILKMGQQQKLAADAQQKSNDS 704


>ref|XP_006438858.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
            gi|557541054|gb|ESR52098.1| hypothetical protein
            CICLE_v10030535mg [Citrus clementina]
          Length = 1208

 Score =  240 bits (612), Expect = 2e-60
 Identities = 211/571 (36%), Positives = 297/571 (52%), Gaps = 52/571 (9%)
 Frame = +1

Query: 595  QIRELEMK---IKSIREALDTATVKDPKESYNEVCSRFRISLESLQLMRLDNCVPVVDAL 765
            Q++E EMK   ++SIREAL++    D   S+  VCS+   +LESL+ +  +N VP  DAL
Sbjct: 166  QVKE-EMKLINVESIREALESVLRGDI--SFEGVCSKLEFTLESLRELVNENNVPTKDAL 222

Query: 766  IQQIFMGIQAVNSVFYSMNPEQQEQDKDILLRLLTYVKDQDFALFASKQKKEIEAMIRCX 945
            IQ  F  +Q+V+SVF SMN   +EQ+K+IL RLL+ +K  +  LF+S Q KE+EAM+   
Sbjct: 223  IQLAFSAVQSVHSVFCSMNHVLKEQNKEILSRLLSVIKSHEPPLFSSNQIKEMEAMLSSL 282

Query: 946  XXXXXXXXXXXXXXXXXMDKKKERGVINGMKLNGL-GNLDEDPSGHSLNSTKKFHLEPVS 1122
                              DK+K+   ++G  +NG   N+  + + + LN  +K  L PV 
Sbjct: 283  VTRAN-------------DKEKDMLAMHG--VNGKDSNIVTENAVNDLNFKEKVPL-PV- 325

Query: 1123 VQYRDQNDSNMEFKTLKSK-----GYGGVGSLNLP-----SDHDGDR----TLDTLQLFP 1260
                   DS M+ K L++      GY   G L LP       HD D     T +T    P
Sbjct: 326  -------DSLMQNKPLEASKPGPPGYRSRGVL-LPLLDPHKVHDVDSLPSPTRETTPSVP 377

Query: 1261 IQN---------QSDSATCTVSDKTEDAAVLPYETDALRAVSTYQQRF-NSSFLLSNQLP 1410
            +Q          +S +A   +S   E      YETDALRA S+YQQ+F  +SF ++++LP
Sbjct: 378  VQRALVVGDGVVKSWAAAAKLSHNAEVHKTPHYETDALRAFSSYQQKFGRNSFFMNSELP 437

Query: 1411 SPTPSVECDDQDRDSSGEVSISSTASSIKTEN------PSVPVQPFTYATPIVDCSSKQ- 1569
            SPTPS E  D D D+ GE+S ++     K  N        V  QP   + P +D SS Q 
Sbjct: 438  SPTPSEESGDGDGDTGGEISSATAVDQPKPVNMPTLGQQPVSSQPMDISQP-MDISSVQA 496

Query: 1570 -----ESIPAKTGQLGSCL-NPILKAMPKSKDPR------RALDLKQQSLTVDYNVPKSE 1713
                  S PA +G       NP++KA  KS+DPR       AL+L  Q   + +N PK E
Sbjct: 497  LTTANNSAPASSGYNPVVKPNPVVKAPIKSRDPRLRFASSNALNLNHQPAPILHNAPKVE 556

Query: 1714 PIVGTMCSRKHKIVEESVLDGHNLKRQRNGLTSSEVPVSRNEQMASRNDRWFGSGCSALP 1893
            P+   M SRK K VEE VLDG  LKRQRNG  +S   V R+E+    +  W        P
Sbjct: 557  PVGRVMSSRKQKTVEEPVLDGPALKRQRNGFENS--GVVRDEKNIYGSGGWLEDTDMFEP 614

Query: 1894 QHNDYKTCLAENMRTDFRKLENGKF--YSGKRQDTNSAGNQQLPVFGTNTFVSLPS-LKD 2064
            Q  + +  L ++  ++ RKL+NG     +    +   +GN+  P    +T VSLP+ LKD
Sbjct: 615  QIMN-RNLLVDSAESNSRKLDNGATSPITSGTPNVVVSGNEPAPATTPSTTVSLPALLKD 673

Query: 2065 ISMNPTMLVNLIM--EQQKLVADTQQKPAQS 2151
            I++NPTML+N++   +QQKL AD QQK   S
Sbjct: 674  IAVNPTMLLNILKMGQQQKLAADAQQKSNDS 704


>ref|XP_006438857.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
            gi|567892677|ref|XP_006438859.1| hypothetical protein
            CICLE_v10030535mg [Citrus clementina]
            gi|557541053|gb|ESR52097.1| hypothetical protein
            CICLE_v10030535mg [Citrus clementina]
            gi|557541055|gb|ESR52099.1| hypothetical protein
            CICLE_v10030535mg [Citrus clementina]
          Length = 1118

 Score =  240 bits (612), Expect = 2e-60
 Identities = 211/571 (36%), Positives = 297/571 (52%), Gaps = 52/571 (9%)
 Frame = +1

Query: 595  QIRELEMK---IKSIREALDTATVKDPKESYNEVCSRFRISLESLQLMRLDNCVPVVDAL 765
            Q++E EMK   ++SIREAL++    D   S+  VCS+   +LESL+ +  +N VP  DAL
Sbjct: 166  QVKE-EMKLINVESIREALESVLRGDI--SFEGVCSKLEFTLESLRELVNENNVPTKDAL 222

Query: 766  IQQIFMGIQAVNSVFYSMNPEQQEQDKDILLRLLTYVKDQDFALFASKQKKEIEAMIRCX 945
            IQ  F  +Q+V+SVF SMN   +EQ+K+IL RLL+ +K  +  LF+S Q KE+EAM+   
Sbjct: 223  IQLAFSAVQSVHSVFCSMNHVLKEQNKEILSRLLSVIKSHEPPLFSSNQIKEMEAMLSSL 282

Query: 946  XXXXXXXXXXXXXXXXXMDKKKERGVINGMKLNGL-GNLDEDPSGHSLNSTKKFHLEPVS 1122
                              DK+K+   ++G  +NG   N+  + + + LN  +K  L PV 
Sbjct: 283  VTRAN-------------DKEKDMLAMHG--VNGKDSNIVTENAVNDLNFKEKVPL-PV- 325

Query: 1123 VQYRDQNDSNMEFKTLKSK-----GYGGVGSLNLP-----SDHDGDR----TLDTLQLFP 1260
                   DS M+ K L++      GY   G L LP       HD D     T +T    P
Sbjct: 326  -------DSLMQNKPLEASKPGPPGYRSRGVL-LPLLDPHKVHDVDSLPSPTRETTPSVP 377

Query: 1261 IQN---------QSDSATCTVSDKTEDAAVLPYETDALRAVSTYQQRF-NSSFLLSNQLP 1410
            +Q          +S +A   +S   E      YETDALRA S+YQQ+F  +SF ++++LP
Sbjct: 378  VQRALVVGDGVVKSWAAAAKLSHNAEVHKTPHYETDALRAFSSYQQKFGRNSFFMNSELP 437

Query: 1411 SPTPSVECDDQDRDSSGEVSISSTASSIKTEN------PSVPVQPFTYATPIVDCSSKQ- 1569
            SPTPS E  D D D+ GE+S ++     K  N        V  QP   + P +D SS Q 
Sbjct: 438  SPTPSEESGDGDGDTGGEISSATAVDQPKPVNMPTLGQQPVSSQPMDISQP-MDISSVQA 496

Query: 1570 -----ESIPAKTGQLGSCL-NPILKAMPKSKDPR------RALDLKQQSLTVDYNVPKSE 1713
                  S PA +G       NP++KA  KS+DPR       AL+L  Q   + +N PK E
Sbjct: 497  LTTANNSAPASSGYNPVVKPNPVVKAPIKSRDPRLRFASSNALNLNHQPAPILHNAPKVE 556

Query: 1714 PIVGTMCSRKHKIVEESVLDGHNLKRQRNGLTSSEVPVSRNEQMASRNDRWFGSGCSALP 1893
            P+   M SRK K VEE VLDG  LKRQRNG  +S   V R+E+    +  W        P
Sbjct: 557  PVGRVMSSRKQKTVEEPVLDGPALKRQRNGFENS--GVVRDEKNIYGSGGWLEDTDMFEP 614

Query: 1894 QHNDYKTCLAENMRTDFRKLENGKF--YSGKRQDTNSAGNQQLPVFGTNTFVSLPS-LKD 2064
            Q  + +  L ++  ++ RKL+NG     +    +   +GN+  P    +T VSLP+ LKD
Sbjct: 615  QIMN-RNLLVDSAESNSRKLDNGATSPITSGTPNVVVSGNEPAPATTPSTTVSLPALLKD 673

Query: 2065 ISMNPTMLVNLIM--EQQKLVADTQQKPAQS 2151
            I++NPTML+N++   +QQKL AD QQK   S
Sbjct: 674  IAVNPTMLLNILKMGQQQKLAADAQQKSNDS 704


>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
          Length = 1184

 Score =  239 bits (609), Expect = 5e-60
 Identities = 226/706 (32%), Positives = 322/706 (45%), Gaps = 23/706 (3%)
 Frame = +1

Query: 148  VQVIEEGDISXXXXXXXXXXXXXXFIQEAKVISKSKPKGDPRVWMEGFLNYSVSSVMRDF 327
            ++ +EEG+IS                QE +V+ ++KPK D RVW            MRD 
Sbjct: 52   IEDVEEGEISDSASVEEISEEDFNK-QEVRVLREAKPKADTRVW-----------TMRDL 99

Query: 328  ESDEKSKLHSSNVLMNNREDNNASLYSKKEVCXXXXXXXXXXXXTRMXXXXXXXXXXXXX 507
            +  +  K H +      R  N A   + +                 M             
Sbjct: 100  Q--DLYKYHQACSGYTPRLYNLAWAQAVQNKPLNDIFVIIDDSGDEMDVKMDDVSEKEEG 157

Query: 508  XXXXXXXXSPIVEKVEEEG--IWVVSSDRNLQIRELEMKIKSIREALDTATVKDPKESYN 681
                          V++EG  + V   + +L+ REL  ++KSI+E L++ TV + ++S++
Sbjct: 158  ELEEGEIDLDSEPDVKDEGGVLDVNEPEIDLKERELVERVKSIQEDLESVTVIEAEKSFS 217

Query: 682  EVCSRFRISLESLQLMRLD-----NCVPVVDALIQQIFMGIQAVNSVFYSMNPEQQEQDK 846
             VCSR + +L SLQ +  +     + VP  DAL QQ+   I+A+N VF SMN  Q+E +K
Sbjct: 218  GVCSRLQNTLGSLQKVFGEKVVGESSVPTKDALAQQLINAIRALNHVFCSMNSNQKELNK 277

Query: 847  DILLRLLTYVKDQDFALFASKQKKEIEAMIRCXXXXXXXXXXXXXXXXXXMDKKKERGVI 1026
            D+  RLL+ V+  D  +F+ +  KE+E M+                     DK  +  V 
Sbjct: 278  DVFSRLLSCVECGDSPIFSIQHIKEVEVMM------SFLDTPAAQSSAEASDKVNDVQVT 331

Query: 1027 NGMKLNGLGNLDEDPSGHSLNSTKKFHLEPVSVQYRDQNDSNMEFKTLKSKGYGGVGSLN 1206
            +GM  N L +  E  SG +  S KKF                  F  L          L+
Sbjct: 332  DGMNRNILDSSVES-SGRAFASAKKFR-------------GRFIFGPL----------LD 367

Query: 1207 LPSDHDGDR----TLDTLQLFPIQNQSDSATCTVSDKTEDAAVLPYETDALRAVSTYQQR 1374
            L  DHD D     T    Q FP+ N+S+  T  V+ +T+D+ + PYETDAL+AVSTYQQ+
Sbjct: 368  LHKDHDEDSLPSPTGKAPQCFPV-NKSELVTAKVAHETQDSIMHPYETDALKAVSTYQQK 426

Query: 1375 FN-SSFLLSNQLPSPTPSVECDDQDRDSSGEVSISSTASSIKTENPSVPVQPFTYATPIV 1551
            F  +SFL  ++LPSPTPS E  D   D SGEVS SST S+  T N      P   + P +
Sbjct: 427  FGLTSFLPIDKLPSPTPSEESGDTYGDISGEVSSSSTISAPITANAPALGHPIVSSAPQM 486

Query: 1552 DCSSKQESIPAKTGQLGSCLNPILKAMPKSKDPR--------RALDLKQQSLTVDYNVPK 1707
            D   +   +P  TG + S  N IL+A  KS+DPR         +LDL ++ L    N PK
Sbjct: 487  DI-VQGLVVPRNTGAVNSRFNSILRASAKSRDPRLRLASSDAGSLDLNERPLPAVSNSPK 545

Query: 1708 SEPIVGTMCSRKHKIVEESVLDGHNLKRQRNGLTSSEVPVSRNEQMASRNDRWFGSGCSA 1887
             +P+   + SRK K  EE +LDG   KRQRNGLTS   P ++ E   +      G GC  
Sbjct: 546  VDPLGEIVSSRKQKSAEEPLLDGPVTKRQRNGLTS---PATKLESKVTVT----GIGCD- 597

Query: 1888 LPQHNDYKTCLAENMRTDFRKLENGKFYSGKRQDTNSAGNQQLPVFGTNTFVSLPS-LKD 2064
                   K  +  N                        GN+ LPV  T+T  SL S LKD
Sbjct: 598  -------KPYVTVN------------------------GNEHLPVVATSTTASLQSLLKD 626

Query: 2065 ISMNPTMLVNLI--MEQQKLVADTQQKPAQSMTLPSISSVAIGTVP 2196
            I++NP + +N+   +EQQK        PA++  LP  S+  +G VP
Sbjct: 627  IAVNPAVWMNIFNKVEQQK-----SGDPAKNTVLPPTSNSILGVVP 667


>ref|XP_007043830.1| RNA polymerase II C-terminal domain phosphatase-like 3, putative
            [Theobroma cacao] gi|508707765|gb|EOX99661.1| RNA
            polymerase II C-terminal domain phosphatase-like 3,
            putative [Theobroma cacao]
          Length = 1290

 Score =  238 bits (607), Expect = 9e-60
 Identities = 244/788 (30%), Positives = 359/788 (45%), Gaps = 78/788 (9%)
 Frame = +1

Query: 64   MFVSESNRFSWNPNEK--ETLVFMEKVGSLVQVIEEGDISXXXXXXXXXXXXXXFIQEAK 237
            M+V  SN   W+  +K  ETL  M K  + V+ +EEG+IS                Q+ K
Sbjct: 1    MYVVGSNWIEWSKLKKNEETLGEMGKDETKVEDVEEGEISDSASIEEISEEDFNK-QDVK 59

Query: 238  VISKSKPK------GDPRVWM---------------EGFLNYSVSSVM----------RD 324
            ++ +SK         + RVW                 G  N++ +  +          +D
Sbjct: 60   ILKESKSSKGGEANSNSRVWTMQDLCKYPSVIRGYASGLYNFAWAQAVQNKPLNEIFVKD 119

Query: 325  FESDEKSKLHSSNVLMNNREDNNASLYSKKEVCXXXXXXXXXXXXTRMXXXXXXXXXXXX 504
            FE  ++ +  + N   ++   + AS+ SK+E                             
Sbjct: 120  FEQPQQDE--NKNSKRSSPSSSVASVNSKEEKGSSGNLAVKVVIDDDSEDEMEEDKVVNL 177

Query: 505  XXXXXXXXXSPIVEKVEEEGIWVVSSDRNL-QIRELEMKIKSIREALDTATVKDPKESYN 681
                       I    E +   + S D N+    ELE +   IR  L+  TV + ++S+ 
Sbjct: 178  DKEEGELEEGEIDLDSEPKEKVLSSEDGNVGNSDELEKRANLIRGVLEGVTVIEAEKSFE 237

Query: 682  EVCSRFRISLESLQLMRLDNCVPVVDALIQQIFMGIQAVNSVFYSMNPEQQEQDKDILLR 861
             VCSR   +LESL+ + L+  VP  DALIQ  F    A+NS F ++N   +EQ+  IL R
Sbjct: 238  GVCSRLHNALESLRALILECSVPAKDALIQLAF---GAINSAFVALNCNSKEQNVAILSR 294

Query: 862  LLTYVKDQDFALFASKQKKEIEAMIRCXXXXXXXXXXXXXXXXXXMDKKKERGVINGMKL 1041
            LL+ VK  D +LF   + KEI+ M+                    +D +K+  V++G+  
Sbjct: 295  LLSIVKGHDPSLFPPDKMKEIDVML-----------ISLNSPARAIDTEKDMKVVDGVNK 343

Query: 1042 NGLGNLDEDPSGHSLNSTKKFHLEPVSVQYRDQNDSNMEFKTLK-------SKGYGGVGS 1200
                 L E+   H L  T K    P S ++   N  N   +TLK       ++G   +  
Sbjct: 344  KDPDALPENIC-HDLTVTNKL---PSSAKFVINNKPNALTETLKPGVPNFRNRGI-SLPL 398

Query: 1201 LNLPSDHDGDR----TLDTLQLFPIQNQSDSATCTV---------SDKTEDAAVLPYETD 1341
            L+L  DHD D     T +T    P+     S    V         S   E   + PYETD
Sbjct: 399  LDLHKDHDADSLPSPTRETTPCLPVNKPLTSGDVMVKSGFMTGKGSHDAEGDKLHPYETD 458

Query: 1342 ALRAVSTYQQRF-NSSFLLSNQLPSPTPSVECDDQDRDSSGEVSISSTASSIKTENPSVP 1518
            AL+A STYQQ+F   SF  S++LPSPTPS E  D+  D+ GEVS SS+  + K   P++P
Sbjct: 459  ALKAFSTYQQKFGQGSFFSSDRLPSPTPSEESGDEGGDNGGEVSSSSSIGNFK---PNLP 515

Query: 1519 V--QPFTYATPIVD--CSSKQESIPAKTG-QLGSCLNPILKAMPKSKDPR--------RA 1659
            +   P   + P+VD   SS Q  I  +    + S  N + K++ KS+DPR         A
Sbjct: 516  ILGHPIVSSAPLVDSASSSLQGQITTRNATPMSSVSNIVSKSLAKSRDPRLWFANSNASA 575

Query: 1660 LDLKQQSLTVDYNVPKSEPIVGTMCSRKHKIVEESVLDGHNLKRQRNGLTSSEVPVSRNE 1839
            LDL ++ L   +N  K  P+ G M SRK K VEE +LD   LKRQRN L    + V+R+ 
Sbjct: 576  LDLNERLL---HNASKVAPVGGIMDSRKKKSVEEPILDSPALKRQRNEL--ENLGVARDV 630

Query: 1840 QMASRNDRWFGSGCSALPQHNDYKTCLAENMRTDFRKLENG----KFYSGKRQDTNSAGN 2007
            Q  S    W      A+      +   AEN+ ++ RK++NG       SGK   T    N
Sbjct: 631  QTVSGIGGWL-EDTDAIGSQITNRNQTAENLESNSRKMDNGVTSSSTLSGKTNITVGT-N 688

Query: 2008 QQLPVFGTNTFVSLPS-LKDISMNPTMLVNLIM--EQQKLVADTQQK---PAQSMTLPSI 2169
            +Q+PV  T+T  SLP+ LKDI++NPTML+N++   +QQ+L A+ QQK   P +S      
Sbjct: 689  EQVPVTSTST-PSLPALLKDIAVNPTMLINILKMGQQQRLGAEAQQKSPDPVKSTFHQPS 747

Query: 2170 SSVAIGTV 2193
            S+  +G V
Sbjct: 748  SNSLLGVV 755


>gb|EXB81217.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Morus
            notabilis]
          Length = 1301

 Score =  236 bits (602), Expect = 3e-59
 Identities = 208/579 (35%), Positives = 297/579 (51%), Gaps = 47/579 (8%)
 Frame = +1

Query: 604  ELEMKIKSIREALDTATVKDPKESYNEVCSRFRISLESLQ--LMRLDNCVPVVDALIQQI 777
            ELE ++  I E L +  V + ++S+ EVCSR + +LESL+  L   +   P  D +IQ  
Sbjct: 199  ELEKRVDLIWETLGSVNVVNAEKSFEEVCSRLQRTLESLRGVLSEKEFSFPTKDVVIQMS 258

Query: 778  FMGIQAVNSVFYSMNPEQQEQDKDILLRLLTYVKDQDFALFASKQKKEIEAMIRCXXXXX 957
               IQ VNSVF SM+  Q+EQ K+ L RL   VK+    LF+ +Q KEIE MI       
Sbjct: 259  ITAIQVVNSVFCSMSVNQKEQKKETLSRLFCSVKNCGTPLFSPEQTKEIELMISSLNPLN 318

Query: 958  XXXXXXXXXXXXXMDKKKERGVINGMKL--NGLGNLDEDPSGHSLNSTKK--------FH 1107
                          DK+KE  +I  +    + L N + + +     S K          H
Sbjct: 319  VLPSSGAS------DKEKETQIIERLHEMDSNLTNANAENASIERTSVKLPQDCVASVVH 372

Query: 1108 LEPVSVQYRDQNDSNMEFKTLKSKGYGGV-GSLNLPSDHDGDR----TLDTLQLFPIQN- 1269
              P+++         +   TL  KG G +   L+L  DHD D     T +    FP+   
Sbjct: 373  SNPITLP------ELLRPGTLAFKGRGLLLPLLDLHKDHDADSLPSPTREAPSCFPVYKP 426

Query: 1270 --------QSDSATCTVSDKTEDAAVLPYETDALRAVSTYQQRF-NSSFLLSNQLPSPTP 1422
                    +  S T  V+   E++ +  YETDAL+AVSTYQQ+F   SFL+S++LPSPTP
Sbjct: 427  LGVADGIIKPVSTTAKVAPGAEESRLHRYETDALKAVSTYQQKFGRGSFLMSDRLPSPTP 486

Query: 1423 SVECDDQDRDSSGEVSISSTASSIKTENPSVPVQPFTYATPIVDCSS--KQESIPAK-TG 1593
            S ECD++D D + EVS S T+ +++T  P++P+   +  T  V  SS   Q  I AK   
Sbjct: 487  SEECDEED-DINQEVSSSLTSGNLRT--PAIPILRPSVVTSSVPVSSPTMQGPIAAKNAA 543

Query: 1594 QLGSCLNPILKAMPKSKDPR--------RALDLKQQSLTVDYNVPKSEPIVGTMCSRKHK 1749
             +GS  N  +KA  +S+DPR         ALDL Q+ LT  +N PK EP   T  SRK +
Sbjct: 544  PVGSGSNSTMKASARSRDPRLRFANSDAGALDLNQRPLTAVHNGPKVEPGDPT-SSRKQR 602

Query: 1750 IVEESVLDGHNLKRQRNGLTSSEVPVSRNEQMASRNDRWFGSGCSALPQHNDYKTCLAEN 1929
            IVEE  LDG  LKRQR+   S+++ V    + AS    W     +  PQ  + K  L EN
Sbjct: 603  IVEEPNLDGPALKRQRHAFVSAKIDV----KTASGVGGWLEDNGTTGPQIMN-KNQLVEN 657

Query: 1930 MRTDFRK---LENGKFYSGKRQDTNSAGNQQLPVFGTNTFVSLPS-LKDISMNPTM---L 2088
               D RK   L NG   +    +  + G +Q+PV GT+T  +LP+ LKDI++NPT+   +
Sbjct: 658  AEADPRKSIHLVNGPIMN----NGPNIGKEQVPVTGTSTPDALPAILKDIAVNPTIFMDI 713

Query: 2089 VNLIMEQQKLVADTQQK--PAQSMTLPSISSVAIGTVPL 2199
            +N + +QQ L AD QQK   +++ T P  ++  +G  PL
Sbjct: 714  LNKLGQQQLLAADAQQKSDSSKNTTHPPGTNSILGAAPL 752


>ref|XP_004310239.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Fragaria vesca subsp. vesca]
          Length = 1230

 Score =  209 bits (533), Expect = 3e-51
 Identities = 190/577 (32%), Positives = 284/577 (49%), Gaps = 47/577 (8%)
 Frame = +1

Query: 610  EMKIKSIREALDTATVKDPKESYNEVCSRFRISLESLQLMRLDNCVPVVDALIQQIFMGI 789
            E ++  +REAL++ T+ + ++S+ +VC RF  SLESL+ +  +  V   +AL+QQ+F  +
Sbjct: 163  EKRVNLLREALESLTITEAEKSFGDVCHRFLDSLESLRGVLSEINVSTKEALVQQLFNAV 222

Query: 790  QAVNSVFYSMNPEQQEQDKDILLRLLTYVKDQDFALFASKQKKEIEAMIRCXXXXXXXXX 969
            +A++SVF SM+ +Q+EQ+KD+L R+L+  K  D + F ++Q KEIE M            
Sbjct: 223  RAISSVFRSMSADQKEQNKDVLSRILSSAK-SDPSPFPAEQLKEIEVMSSSMDSPQTKAG 281

Query: 970  XXXXXXXXXMDKKKERGVINGMKLNGLGNLDEDPSGHSLNSTKKFHLE-----PVSVQYR 1134
                         KE G+     +NG+   D D SG + +    +         VSV + 
Sbjct: 282  ------------TKENGI---QCINGVYKTDSDTSGANASHVFTYAANTGSDTQVSVVHS 326

Query: 1135 DQNDSNMEFKTLKSKGYGGVG----SLNLPSDHDGDR----TLDTLQLFPIQ-------- 1266
            + N S+ E     S  + G G     L+L  DHD D     T +    FP Q        
Sbjct: 327  NPNISS-EVPRSGSSSFKGRGLMLPLLDLHMDHDEDSLPSPTREPPACFPAQKPVVVENG 385

Query: 1267 --NQSDSATCTVSDKTEDAAVLPYETDALRAVSTYQQRFNSSFLLSNQLPSPTPSVECDD 1440
               +S   T   +   E + +  YET+AL+AVS+YQQ+F+ +  L+++LPSPTPS E  D
Sbjct: 386  MVKKSGWETARAALDVEGSKMHVYETEALKAVSSYQQKFSRNSFLTSELPSPTPSEEEGD 445

Query: 1441 QDRDSS-GEVSISSTASSIKTENPSV---PVQPFTYATPIVDCSSKQESIPAKTG---QL 1599
               D++ GEVS SS +++++T  P V    V     AT +   S     I AKT     L
Sbjct: 446  NGDDAAVGEVSSSSASNNVRTPQPPVSGRQVVSSVPATTLPGSSGMHGLITAKTASPVSL 505

Query: 1600 GSCLNPILKAMPKSKDPR--------RALDLKQQSLTVDYNVPKSEPIVGTMCSRKHKIV 1755
            GS  N   K+  KS+DPR         AL L QQS    +N PK + ++ T+ SRKHK  
Sbjct: 506  GS--NMPNKSSAKSRDPRLRFANSDAGALTLNQQSSIQVHNAPKVDSVI-TLSSRKHKSP 562

Query: 1756 EESVLDGHNLKRQRNGLTSSEVPVSRNEQMASRNDRWFGSGCSALPQHNDYKTCLAENMR 1935
            E+S  DG   KRQR     +   V    + +  N  W   G S  P H   +    E   
Sbjct: 563  EDSNFDGPESKRQR----GANSVVGWGAKTSFGNGVWLEDGSSVGP-HLINRNQTVEKKE 617

Query: 1936 TDFRKLENGKFYSGK---RQDTNSAGNQQLPVFGTNTFVSLPSL-KDISMNPTMLVNLIM 2103
             D RK+ N     G      +  +  N+++P+    + VSLP++ KDI++NPTMLVN++ 
Sbjct: 618  ADPRKMVNVSSSPGTVEGNSNGQNTANEKVPLVAP-SLVSLPAIFKDIAVNPTMLVNILK 676

Query: 2104 EQQKLVADTQQKPA-----QSMTLPSISSVAIGTVPL 2199
                 +A+ QQ  A     +S+T P  SS   GT  L
Sbjct: 677  -----LAEAQQNAAAPARKESLTYPPSSSSIPGTAAL 708


>ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Populus trichocarpa]
            gi|550343308|gb|EEE79627.2| hypothetical protein
            POPTR_0003s16280g [Populus trichocarpa]
          Length = 1247

 Score =  208 bits (529), Expect = 9e-51
 Identities = 187/587 (31%), Positives = 278/587 (47%), Gaps = 56/587 (9%)
 Frame = +1

Query: 604  ELEMKIKSIREALDTATVKDPKESYNEVCSRFRISLESL-QLMRL-DNCVPVVDALIQQI 777
            + E ++KSIRE L++ +V    +S+  VC +   +LESL +L+R+ +N  P  D+L++ +
Sbjct: 174  DTEKRVKSIREDLESVSVIKDDKSFEAVCLKLHNALESLKELVRVNENGFPSKDSLVRLL 233

Query: 778  FMGIQAVNSVFYSMNPEQQEQDKDILLRLLTYVKDQDFALFASKQKKEIEAMIRCXXXXX 957
            F  I AVNS F SMN + +EQ+K + +R L+ V   D + F+ +  KE+           
Sbjct: 234  FTAIGAVNSFFSSMNQKLKEQNKGVFMRFLSLVNSHDPSFFSPEHTKEV----------- 282

Query: 958  XXXXXXXXXXXXXMDKKKERGVINGMKLNGLGNLDEDPSGHSLNSTKKFHLEPVSVQYRD 1137
                          D +      +   +N L +  E      +++   F +EP       
Sbjct: 283  --------CDFCNFDFRIVSLCYDLTTMNRLPSAAES----FVHNKPNFSIEPPKPGVPS 330

Query: 1138 QNDSNMEFKTLKSKGYGGVGSLNLPSDHDGDRTLDTLQLFPIQN---------QSDSATC 1290
                 +    L  K +    SL  P       T +T   FP+Q           S     
Sbjct: 331  FKSRGVLLPLLDLKKFHDEDSLPSP-------TRETAPSFPVQRLLPIGDGMISSGLPVP 383

Query: 1291 TVSDKTEDAAVLPYETDALRAVSTYQQRFNSSFLLSNQLPSPTPSVECDDQDRDSSGEVS 1470
             V+  TE+  V PYETDAL+AVS+YQ++FN +   +N+LPSPTPS E  + D D++GEVS
Sbjct: 384  KVASITEEPRVHPYETDALKAVSSYQKKFNLNSFFTNELPSPTPSEESGNGDGDTAGEVS 443

Query: 1471 ISSTASSIKTENPSV--------------PVQPFTYATPIVDCSSKQESIPAK-TGQLGS 1605
             SST  + +T NP V              P  P     P ++ SS +  IP + +  + S
Sbjct: 444  SSSTV-NYRTVNPPVSDRKSASPSPSPPPPPPPPPPPPPHLNNSSIRVVIPTRNSAPVSS 502

Query: 1606 CLNPILKAMPKSKDPR--------RALDLKQQSLTVDYNVPKSEPIVGTMCSRKHKIVEE 1761
              +  +KA  KS+DPR         ALD  Q++L +  N P++EP      SRK KI EE
Sbjct: 503  GTSSTVKASAKSRDPRLRYVNTDASALDQNQRTLLMVNNPPRAEPSGAIAGSRKQKI-EE 561

Query: 1762 SVLDGHNLKRQRNGLTSSEVPVSRNEQMASRNDRWFGSGCSALPQHNDYKTCLAENMRTD 1941
             VLDG +LKRQRN        V R+ +  +    W      A PQ  + K   AEN    
Sbjct: 562  DVLDGTSLKRQRNSF--DNFGVVRDIRSMTGTGGWLEDTDMAEPQTVN-KNQWAENAEPG 618

Query: 1942 FRKLENG---KFYSGKRQDTNSAGNQQLPVFGTNTF-------------VSLPS-LKDIS 2070
             +++ NG             + +GN Q+PV G NT               SLP  LKDI+
Sbjct: 619  -QRINNGVVCPSTGSVMSSVSCSGNVQVPVMGINTIAGSEQAPVTSTTTASLPDLLKDIT 677

Query: 2071 MNPTMLVNLIM--EQQKLVADTQQK---PAQSMTLPSISSVAIGTVP 2196
            +NPTML+N++   +QQ+L  D QQK   PA+S + P  S+  +G +P
Sbjct: 678  VNPTMLINILKMGQQQRLALDGQQKLADPAKSTSHPPSSNTVLGAIP 724


>ref|XP_002297869.2| CTD phosphatase-like protein 3 [Populus trichocarpa]
            gi|550347145|gb|EEE82674.2| CTD phosphatase-like protein
            3 [Populus trichocarpa]
          Length = 1190

 Score =  205 bits (522), Expect = 6e-50
 Identities = 182/574 (31%), Positives = 277/574 (48%), Gaps = 32/574 (5%)
 Frame = +1

Query: 571  VVSSDRNLQIRELEMKIKSIREALDTATVKDPKESYNEVCSRFRISLESLQLM--RLDNC 744
            VV S+  + + ++E ++KSIR+ L++ +V + ++S+  VC +    LESL+ +    DN 
Sbjct: 133  VVQSEGMVSV-DVENRVKSIRKDLESVSVIETEKSFEAVCLKLHKVLESLKELVGGNDNS 191

Query: 745  VPVVDALIQQIFMGIQAVNSVFYSMNPEQQEQDKDILLRLLTYVKDQDFALFASKQKKEI 924
             P  D L+Q +FM I+ VNSVF SMN + +EQ+K +  R  + +       F+  Q KE+
Sbjct: 192  FPSKDGLVQLLFMAIRVVNSVFCSMNKKLKEQNKGVFSRFFSLLNSHYPPFFSPGQNKEV 251

Query: 925  ------EAMIRCXXXXXXXXXXXXXXXXXXMDKKKERGVINGMKLNGLGNLDEDPSGHSL 1086
                  +++ +                   +  K  +  I   K  G+ +         L
Sbjct: 252  LNENHNDSLAKTAGYDLTTMSEKLPAAETFVQNKPNKS-IEAPKPPGVPSFKSRGVLLPL 310

Query: 1087 NSTKKFHLEPVSVQYRDQNDSNMEFKTLKSKGYGGVGS-LNLPSDHDGDRTLDTLQLFPI 1263
               KK+H E  S+    Q  +    + L + G G V S L +P                 
Sbjct: 311  LDLKKYHDED-SLPSPTQETTPFPVQRLLAIGDGMVSSGLPVPK---------------- 353

Query: 1264 QNQSDSATCTVSDKTEDAAVLPYETDALRAVSTYQQRFNSSFLLSNQLPSPTPSVECDDQ 1443
                      V+   E+  + PYETDAL+AVS+YQQ+FN +   +N+LPSPTPS E  + 
Sbjct: 354  ----------VTPVAEEPRMHPYETDALKAVSSYQQKFNRNSFFTNELPSPTPSEESGNG 403

Query: 1444 DRDSSGEVSISSTASSIKTENPSVPVQ--------PFTYATPIVDCSSKQESIPAK-TGQ 1596
            D D++GEVS SST  + +T NP V  Q        P     P  D S+ +  +P + +  
Sbjct: 404  DGDTAGEVSSSSTVVNYRTVNPPVSDQKNAPPSPPPLPPPPPHPDSSNIRGVVPTRNSAP 463

Query: 1597 LGSCLNPILKAMPKSKDPRR--------ALDLKQQSLTVDYNVPKSEPIVGTMCSRKHKI 1752
            + S  +  +KA  KS+DPR         ALD  Q++L +  N+P+ EP    + S+KHKI
Sbjct: 464  VSSGPSSTIKASAKSRDPRLRYVNIDACALDHNQRALPMVNNLPRVEPAGAIVGSKKHKI 523

Query: 1753 VEESVLDGHNLKRQRNGLTSSEVPVSRNEQMASRNDRWFGSGCSALPQHNDYKTCLAENM 1932
             EE VLD  +LKRQRN          R+ +  +    W      A PQ  + K   AEN 
Sbjct: 524  -EEDVLDDPSLKRQRNSF--DNYGAVRDIESMTGTGGWLEDTDMAEPQTVN-KNQWAENS 579

Query: 1933 RTDFRKLENGKFYSGKRQDTNSAGNQQLPVFGTNTFVSLPS-LKDISMNPTMLVNLIM-- 2103
              +     +G   S     +N  G++Q  V  T T  SLP  LKDI++NPTML+N++   
Sbjct: 580  NVN----GSGNAQSPFMGISNITGSEQAQVTSTAT-TSLPDLLKDIAVNPTMLINILKMG 634

Query: 2104 EQQKLVADTQQ---KPAQSMTLPSISSVAIGTVP 2196
            +QQ+L  D QQ    PA+S + P IS+  +G +P
Sbjct: 635  QQQRLALDGQQTLSDPAKSTSHPPISNTVLGAIP 668


>ref|XP_004157633.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
            phosphatase-like 3-like [Cucumis sativus]
          Length = 1249

 Score =  197 bits (502), Expect = 1e-47
 Identities = 180/573 (31%), Positives = 283/573 (49%), Gaps = 36/573 (6%)
 Frame = +1

Query: 589  NLQIRELEMKIKSIREALDTATVKDPKESYNEVCSRFRISLESLQLMRLDNCVPVVDALI 768
            +L+ +EL+  +K I++ LD  T+   ++S+ EVCS+   S+E+   +     VP  DALI
Sbjct: 188  DLETKELDELLKFIQKTLDGVTIDAAQKSFQEVCSQIHSSIETFVELLQGKVVPRKDALI 247

Query: 769  QQIFMGIQAVNSVFYSMNPEQQEQDKDILLRLLTYVKDQDFALFASKQKKEIEAMIRCXX 948
            Q+++  ++ +NSVF SMN  ++E+ K+ L RLL+YVK+ D  LF+ +Q K +E  +    
Sbjct: 248  QRLYAALRLINSVFCSMNLSEKEEHKEHLSRLLSYVKNCDPPLFSPEQIKSVEVKM---- 303

Query: 949  XXXXXXXXXXXXXXXXMDKKKERGVINGMKLNGLGNLDEDPSGHSLNSTKKFHLEPVSVQ 1128
                              K+ E  + NG+K     +     S   L  + K   + +   
Sbjct: 304  --PSTDSLDHLPSMRGSAKEVEIHIPNGVKDMDFYSAYTSTSS-QLTPSNKLASDSIPFG 360

Query: 1129 YRDQNDSNMEFKTLKS-----KGYGG-VGSLNLPSDHDGDR----TLDTLQLFPIQNQSD 1278
             + +N+ N+  + L+S     KG G  +  L+L  DHD D     T +   +F +Q +S 
Sbjct: 361  VKGKNNLNILSEGLQSGVSSIKGRGPLLPLLDLHKDHDADSLPSPTREAPTIFSVQ-KSG 419

Query: 1279 SATCTVSDKTEDAAVLPYETDALRAVSTYQQRF-NSSFLLSNQLPSPTPSVECDDQDRDS 1455
            +A   ++   + +   PYETDAL+AVSTYQQ+F  SSF ++++LPSPTPS E  D   D 
Sbjct: 420  NAPTKMAFPVDGSRSHPYETDALKAVSTYQQKFGRSSFSMADRLPSPTPSEE-HDGGGDI 478

Query: 1456 SGEVSISSTASSIKTENPSVPVQPFTYAT-------PIVDCSSKQESI-PAKTGQLGSCL 1611
             GEVS SS   S+K+ N S P Q    A+       P +D SS +  I P       S  
Sbjct: 479  GGEVSSSSIIRSLKSSNVSKPGQKSNSASNVSTGLFPNMDSSSTRVLISPLNVAPPSSVS 538

Query: 1612 NPILKAMPKSKDPR--------RALDLKQQSLTVDYNVPKSEPI--VGTMCSRKHKIVEE 1761
            NP +K + KS+DPR          +DL  +++    +V  S  +    T+  RK K+  E
Sbjct: 539  NPTVKPLAKSRDPRLRIVNSDASGMDLNPRTMA---SVQSSSILESAATLHLRKQKMDGE 595

Query: 1762 SVLDGHNLKRQRNGLTSSEVPVSRNEQMASRNDRWFGSGCSALPQ-HNDYKTCLAENMRT 1938
               DG  +KR R G  +  V  S + +  S +  W      A P+  N  +  +AE   T
Sbjct: 596  PNTDGPEVKRLRIGSQNLAVAAS-DVRAVSGSGGWLEDTMPAGPRLFNRNQMEIAEANAT 654

Query: 1939 DFRKLENGKFYSGKRQDTNSAGNQQLPVFGTNTFVSLPS-LKDISMNPTMLVNLI--MEQ 2109
            +   + N           + +GN+  P    +   SLPS LKDI +NPTML+NL+   +Q
Sbjct: 655  EKSNVTN----------NSGSGNECTPTVNNSNDASLPSLLKDIVVNPTMLLNLLKMSQQ 704

Query: 2110 QKLVADTQQK---PAQSMTLPSISSVAIGTVPL 2199
            Q+L A+ + K   P ++   P+  +   G+ PL
Sbjct: 705  QQLAAELKLKSSEPEKNAICPTSLNPCQGSSPL 737


>ref|XP_004140651.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Cucumis sativus]
          Length = 1249

 Score =  197 bits (502), Expect = 1e-47
 Identities = 180/573 (31%), Positives = 283/573 (49%), Gaps = 36/573 (6%)
 Frame = +1

Query: 589  NLQIRELEMKIKSIREALDTATVKDPKESYNEVCSRFRISLESLQLMRLDNCVPVVDALI 768
            +L+ +EL+  +K I++ LD  T+   ++S+ EVCS+   S+E+   +     VP  DALI
Sbjct: 188  DLETKELDELLKFIQKTLDGVTIDAAQKSFQEVCSQIHSSIETFVELLQGKVVPRKDALI 247

Query: 769  QQIFMGIQAVNSVFYSMNPEQQEQDKDILLRLLTYVKDQDFALFASKQKKEIEAMIRCXX 948
            Q+++  ++ +NSVF SMN  ++E+ K+ L RLL+YVK+ D  LF+ +Q K +E  +    
Sbjct: 248  QRLYAALRLINSVFCSMNLSEKEEHKEHLSRLLSYVKNCDPPLFSPEQIKSVEVKM---- 303

Query: 949  XXXXXXXXXXXXXXXXMDKKKERGVINGMKLNGLGNLDEDPSGHSLNSTKKFHLEPVSVQ 1128
                              K+ E  + NG+K     +     S   L  + K   + +   
Sbjct: 304  --PSTDSLDHLPSMRGSAKEVEIHIPNGVKDMDFYSAYTSTSS-QLTPSNKLASDSIPFG 360

Query: 1129 YRDQNDSNMEFKTLKS-----KGYGG-VGSLNLPSDHDGDR----TLDTLQLFPIQNQSD 1278
             + +N+ N+  + L+S     KG G  +  L+L  DHD D     T +   +F +Q +S 
Sbjct: 361  VKGKNNLNILSEGLQSGVSSIKGRGPLLPLLDLHKDHDADSLPSPTREAPTIFSVQ-KSG 419

Query: 1279 SATCTVSDKTEDAAVLPYETDALRAVSTYQQRF-NSSFLLSNQLPSPTPSVECDDQDRDS 1455
            +A   ++   + +   PYETDAL+AVSTYQQ+F  SSF ++++LPSPTPS E  D   D 
Sbjct: 420  NAPTKMAFPVDGSRSHPYETDALKAVSTYQQKFGRSSFSMADRLPSPTPSEE-HDGGGDI 478

Query: 1456 SGEVSISSTASSIKTENPSVPVQPFTYAT-------PIVDCSSKQESI-PAKTGQLGSCL 1611
             GEVS SS   S+K+ N S P Q    A+       P +D SS +  I P       S  
Sbjct: 479  GGEVSSSSIIRSLKSSNVSKPGQKSNSASNVSTGLFPNMDSSSTRVLISPLNVAPPSSVS 538

Query: 1612 NPILKAMPKSKDPR--------RALDLKQQSLTVDYNVPKSEPI--VGTMCSRKHKIVEE 1761
            NP +K + KS+DPR          +DL  +++    +V  S  +    T+  RK K+  E
Sbjct: 539  NPTVKPLAKSRDPRLRIVNSDASGMDLNPRTMA---SVQSSSILESAATLHLRKQKMDGE 595

Query: 1762 SVLDGHNLKRQRNGLTSSEVPVSRNEQMASRNDRWFGSGCSALPQ-HNDYKTCLAENMRT 1938
               DG  +KR R G  +  V  S + +  S +  W      A P+  N  +  +AE   T
Sbjct: 596  PNTDGPEVKRLRIGSQNLAVAAS-DVRAVSGSGGWLEDTMPAGPRLFNRNQMEIAEANAT 654

Query: 1939 DFRKLENGKFYSGKRQDTNSAGNQQLPVFGTNTFVSLPS-LKDISMNPTMLVNLI--MEQ 2109
            +   + N           + +GN+  P    +   SLPS LKDI +NPTML+NL+   +Q
Sbjct: 655  EKSNVTN----------NSGSGNECTPTVNNSNDASLPSLLKDIVVNPTMLLNLLKMSQQ 704

Query: 2110 QKLVADTQQK---PAQSMTLPSISSVAIGTVPL 2199
            Q+L A+ + K   P ++   P+  +   G+ PL
Sbjct: 705  QQLAAELKLKSSEPEKNAICPTSLNPCQGSSPL 737


>ref|XP_002304714.2| hypothetical protein POPTR_0003s16280g [Populus trichocarpa]
            gi|550343307|gb|EEE79693.2| hypothetical protein
            POPTR_0003s16280g [Populus trichocarpa]
          Length = 1030

 Score =  175 bits (443), Expect = 9e-41
 Identities = 166/522 (31%), Positives = 242/522 (46%), Gaps = 62/522 (11%)
 Frame = +1

Query: 817  MNPEQQEQDKDILLRLLTYVKDQDFALFASKQKKEIEAMIRCXXXXXXXXXXXXXXXXXX 996
            MN + +EQ+K + +R L+ V   D + F+ +  KEIE M+                    
Sbjct: 1    MNQKLKEQNKGVFMRFLSLVNSHDPSFFSPEHTKEIELMVSSLDSHDILSSSRAGEER-- 58

Query: 997  MDKKKERGVINGMKLNGLGNLDEDPSGHSLNSTKKFHLEPVSVQYRDQNDSNMEFK---- 1164
              + +  G +N    + L       +G+ L +  +      S  +   N S    K    
Sbjct: 59   --ETQVSGKVNERDNDSLSKT----AGYDLTTMNRLPSAAESFVHNKPNFSIEPPKPGVP 112

Query: 1165 TLKSKGYGGVGSLNLPSDHDGDR----TLDTLQLFPIQN---------QSDSATCTVSDK 1305
            + KS+G   +  L+L   HD D     T +T   FP+Q           S      V+  
Sbjct: 113  SFKSRGVL-LPLLDLKKFHDEDSLPSPTRETAPSFPVQRLLPIGDGMISSGLPVPKVASI 171

Query: 1306 TEDAAVLPYETDALRAVSTYQQRFNSSFLLSNQLPSPTPSVECDDQDRDSSGEVSISSTA 1485
            TE+  V PYETDAL+AVS+YQ++FN +   +N+LPSPTPS E  + D D++GEVS SST 
Sbjct: 172  TEEPRVHPYETDALKAVSSYQKKFNLNSFFTNELPSPTPSEESGNGDGDTAGEVSSSSTV 231

Query: 1486 SSIKTENPSV--------------PVQPFTYATPIVDCSSKQESIPAK-TGQLGSCLNPI 1620
             + +T NP V              P  P     P ++ SS +  IP + +  + S  +  
Sbjct: 232  -NYRTVNPPVSDRKSASPSPSPPPPPPPPPPPPPHLNNSSIRVVIPTRNSAPVSSGTSST 290

Query: 1621 LKAMPKSKDPR--------RALDLKQQSLTVDYNVPKSEPIVGTMCSRKHKIVEESVLDG 1776
            +KA  KS+DPR         ALD  Q++L +  N P++EP      SRK KI EE VLDG
Sbjct: 291  VKASAKSRDPRLRYVNTDASALDQNQRTLLMVNNPPRAEPSGAIAGSRKQKI-EEDVLDG 349

Query: 1777 HNLKRQRNGLTSSEVPVSRNEQMASRNDRWFGSGCSALPQHNDYKTCLAENMRTDFRKLE 1956
             +LKRQRN        V R+ +  +    W      A PQ  + K   AEN     +++ 
Sbjct: 350  TSLKRQRNSF--DNFGVVRDIRSMTGTGGWLEDTDMAEPQTVN-KNQWAENAEPG-QRIN 405

Query: 1957 NG---KFYSGKRQDTNSAGNQQLPVFGTNTF-------------VSLPS-LKDISMNPTM 2085
            NG             + +GN Q+PV G NT               SLP  LKDI++NPTM
Sbjct: 406  NGVVCPSTGSVMSSVSCSGNVQVPVMGINTIAGSEQAPVTSTTTASLPDLLKDITVNPTM 465

Query: 2086 LVNLIM--EQQKLVADTQQK---PAQSMTLPSISSVAIGTVP 2196
            L+N++   +QQ+L  D QQK   PA+S + P  S+  +G +P
Sbjct: 466  LINILKMGQQQRLALDGQQKLADPAKSTSHPPSSNTVLGAIP 507


>ref|XP_007225412.1| hypothetical protein PRUPE_ppa000589mg [Prunus persica]
            gi|462422348|gb|EMJ26611.1| hypothetical protein
            PRUPE_ppa000589mg [Prunus persica]
          Length = 1085

 Score =  174 bits (441), Expect = 2e-40
 Identities = 157/448 (35%), Positives = 232/448 (51%), Gaps = 48/448 (10%)
 Frame = +1

Query: 997  MDKKKERGVINGMKLNGLGNLDEDPS-------GHSLNSTKKFHLEPVSVQYRDQNDSNM 1155
            MD +KE G +      G  +LD +P+       G + + +   H  P+ +    +   + 
Sbjct: 139  MDVEKEEGELE----EGEIDLDSEPADNENAAAGEAKDDSAVVHNNPIMLSEVPRPGVS- 193

Query: 1156 EFKTLKSKGYGGVGSLNLPSDHDGDR----TLDTLQLFPIQNQ-----------SDSATC 1290
               +LK +G   +  L+L  DHD D     T +T   FP+QN            SD+AT 
Sbjct: 194  ---SLKGRGVL-LPLLDLHKDHDADSLPSPTRETPSCFPVQNTLVVADGMVKSASDTATA 249

Query: 1291 TVSDKTEDAAVLPYETDALRAVSTYQQRFN-SSFLLSNQLPSPTPSVECDDQDRDSSGEV 1467
             V+   ED+ +  YET+AL+AVS+YQQ+FN SSFL+S +LPSPTPS +  + D D+ GEV
Sbjct: 250  RVALNAEDSRLHSYETEALKAVSSYQQKFNRSSFLMSERLPSPTPSEDGGNGDDDTGGEV 309

Query: 1468 SISSTASSIKTENPSVPVQPFTYATPI-VDCSSKQESIPAKT-GQLGSCLNPILKAMPKS 1641
            S SS AS+++T  P +  +     +PI V   S Q    AK+     S  +  +KA  KS
Sbjct: 310  S-SSFASNLRTSCPPISGRQIVSPSPIPVGSPSMQGRATAKSAAPPNSEPSMTIKASAKS 368

Query: 1642 KDPR--------RALDLKQQSLTVDYNVPKSEPIVGTMCSRKHKIVEESVLDGHNLKRQR 1797
            +DPR         AL+L QQ  TV ++ PK + ++ T+ SRK K +EES  DG  LKRQR
Sbjct: 369  RDPRLRFANSDMGALNLNQQPSTVVHSAPKVDSVI-TLSSRKQKPLEESRFDGPALKRQR 427

Query: 1798 NGLTSSEVPVSRNEQMASRNDRWFGSGCSALPQHNDYKTCLAENMRTDFRKLENGKFYSG 1977
            N L +S   +  + + AS +  W       +  H + K    EN  TD R +      S 
Sbjct: 428  NALENS--GIVGDAKTASGSGGWL-EDIGGVGPHLNSKNQTVENAETDPRNVVK-VLSSP 483

Query: 1978 KRQDTNSAG----NQQLPVFGTNTFVSLPS-LKDISMNPTMLVNLIM--EQQKLVADTQQ 2136
               D N+ G    N+ + + G  +  SLP  LKDI++NPTML+NL+   +QQ++ ++  Q
Sbjct: 484  STVDCNTNGPNSANEHVSLMGA-SMASLPELLKDIAVNPTMLLNLLKMGQQQRVASEAHQ 542

Query: 2137 K---PAQSMTLPSIS-----SVAIGTVP 2196
            K   P ++MT P+ S     S A+G VP
Sbjct: 543  KSADPPKTMTHPTSSSSILVSAALGNVP 570


>ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Solanum tuberosum]
          Length = 1218

 Score =  172 bits (437), Expect = 4e-40
 Identities = 166/563 (29%), Positives = 262/563 (46%), Gaps = 40/563 (7%)
 Frame = +1

Query: 628  IREALDTATVKDPKESYNEVCSRFRISLESLQLMRLDNCVPVVDALIQQIFMGIQAVNSV 807
            +RE L + T+ +  +S++ VCS+ + SL +L  + L       D LIQ     ++ +NSV
Sbjct: 155  VREQLQSVTLDETHKSFSMVCSKLQTSLLALGELALSQ--DKNDILIQLFMTALRTINSV 212

Query: 808  FYSMNPEQQEQDKDILLRLLTYVKDQDFALFASKQKKEIEAMIRCXXXXXXXXXXXXXXX 987
            FYSMN +Q++Q+ DIL RLL + K Q  AL +S+Q KE++A+I                 
Sbjct: 213  FYSMNQDQKQQNTDILSRLLFHAKTQLPALLSSEQLKEVDAVI------------LSINQ 260

Query: 988  XXXMDKKKERGVINGMKL-----NGLGNLDEDPSGHSLNSTKKFHLEPVSVQYRDQNDSN 1152
                   ++   +NG+K+       + +   + +     +  K+ L  VS++     + +
Sbjct: 261  SAVFSNTQDNDKVNGIKVVELLDKKVSHKSSENANQDFTAVNKYDLGAVSIKSSGLKEQS 320

Query: 1153 MEFKTLK-----SKGYG-GVGSLNLPSDHDGDR----TLDTLQLFPIQNQSDSATCTVSD 1302
            + F+++K     SK  G  +  L+L  DHD D     T +    FP+   + +      D
Sbjct: 321  VSFESVKPGLANSKAKGLSIPLLDLHKDHDEDTLPSPTREIGPQFPVAKATQAHGMVKLD 380

Query: 1303 --------KTEDAAVLPYETDALRAVSTYQQRF-NSSFLLSNQLPSPTPSVECDDQDRDS 1455
                    +  ++ + PYETDAL+AVS+YQQ+F  SS  +S  LPSPTPS E D    D 
Sbjct: 381  LPIFAGSLEKGNSLLHPYETDALKAVSSYQQKFGRSSLFVSENLPSPTPSEEGDSGKGDI 440

Query: 1456 SGEVSISSTASSIKTENPSVPVQPFTYATPIVDCSSKQESIPAKTGQLGSCL-NPILK-A 1629
             GEV+      +    N S   QP   + P  +    Q    A+T    S L NP L+ +
Sbjct: 441  GGEVTSLDVVHNASHLNESSMGQPILSSVPQTNILDGQGLGTARTADPLSFLPNPSLRSS 500

Query: 1630 MPKSKDPRRAL---DLKQQSLT--------VDYNVPKSEPIVGTMCSRKHKIVEESVLDG 1776
              KS+DPR  L   D   Q+          +D  +  S  ++G   S+K K V+  V   
Sbjct: 501  TAKSRDPRLRLATSDAVAQNTNKNILPIPDIDLKLEASLEMIG---SKKQKTVDLPVFGA 557

Query: 1777 HNLKRQRNGLTSSEVPVSRNEQMASRNDRWF-GSGCSALPQHNDYKTCLAENMRTDFRKL 1953
               KRQR+  T S   +  + + ++ N  W    G + LP  +    C  ++   D RKL
Sbjct: 558  PLPKRQRSEQTDS--IIVSDVRPSTGNGGWLEDRGTAGLPITS--SNCATDSSDNDIRKL 613

Query: 1954 ENGKFYSGKRQDTNSAGNQQLPVFGTNTFVSLPS-LKDISMNPTMLVNLI-MEQQKLVAD 2127
            E                 +  PV G +T  +L S LKDI++NP++ +N+I MEQQK    
Sbjct: 614  EQVTATIATIPSVIVNAAENFPVTGISTSTTLHSLLKDIAINPSIWMNIIKMEQQKSADA 673

Query: 2128 TQQKPAQSMTLPSISSVAIGTVP 2196
            ++   AQ+ +  SI    +G VP
Sbjct: 674  SRTTTAQASSSKSI----LGAVP 692


>ref|XP_007139315.1| hypothetical protein PHAVU_008G019000g [Phaseolus vulgaris]
            gi|561012448|gb|ESW11309.1| hypothetical protein
            PHAVU_008G019000g [Phaseolus vulgaris]
          Length = 1272

 Score =  171 bits (434), Expect = 1e-39
 Identities = 173/561 (30%), Positives = 260/561 (46%), Gaps = 40/561 (7%)
 Frame = +1

Query: 628  IREALDTATVKDPKESYNEVCSRFRISLESLQLMRLDNCVPVVDALIQQIFMGIQAVNSV 807
            +R+ L+  TV +  ES+ +  SR   +L  +     D+     D LI+  F  I+ V SV
Sbjct: 193  VRDVLEGVTVANVAESFAQTSSRLLNALPQVFSRPADS---EKDDLIRLSFNAIEVVYSV 249

Query: 808  FYSMNPEQQEQDKDILLRLLTYVKDQDFA-LFASKQKKEIEAMIRCXXXXXXXXXXXXXX 984
            F SM+   +EQ+K+ +LRLL+  KD+  A LF+ +  KEI+ M+                
Sbjct: 250  FRSMDSSDKEQNKNSILRLLSSAKDKKQAQLFSPEHIKEIQDMMTAIDSVGALGSNEAIY 309

Query: 985  XXXXMD----KKKERGVINGMKLNGLGNLDEDP--SGHSLNSTKKFHLEPVSVQYRDQND 1146
                +     K +E   +  ++  G+   +     +   ++S K  H + +         
Sbjct: 310  METELQTPEIKSQENSALE-VQTRGIKIQENQAVVATELVSSIKPLHSDIIGASRA---- 364

Query: 1147 SNMEFKTLKSKGYGGV-GSLNLPSDHDGDR----TLDTLQLFPIQNQSDSATCTVSDKTE 1311
              ++F     KG G +   L+L  DHD D     T +    FP+          V   + 
Sbjct: 365  --LKFGQNSIKGRGVLLPLLDLHKDHDADSLPSPTREAPSCFPVNKLLSVGEVMVKSGSA 422

Query: 1312 DAAVLP--------------YETDALRAVSTYQQRFNSSFLLSN-QLPSPTPSVECDDQD 1446
             A + P              YETDAL+AVSTYQQ+F  S L +N +LPSPTPS +CDD  
Sbjct: 423  AAKMQPGKLEVDSEGSKFHLYETDALKAVSTYQQKFGRSSLFTNDKLPSPTPSGDCDDMA 482

Query: 1447 RDSSGEVSISSTASSIKTENPSVPVQPFTYATPIVDCSSKQESIPAKTGQLGSCLNPILK 1626
             D++ EVS +ST+  + +  P++  QP   AT  VD S     I ++    GS   P+ K
Sbjct: 483  VDTNEEVSSASTSGFLTSTKPTLLDQPPVSATS-VDKSRLLGLISSRVDAAGSGSFPV-K 540

Query: 1627 AMPKSKDPRRALDLKQQS-----LTVDYNVPKSEPIVGTMCSRKHKIVEESVLDGHNLKR 1791
            +  KS+DPRR L   + S      TV +N+PK E   G+  SRK K VEE   D    KR
Sbjct: 541  SSAKSRDPRRRLINSEASAVDNQFTVTHNMPKVE-YAGSTISRKQKAVEEPSFDLTVSKR 599

Query: 1792 QRNGLTSSEVPVSRNEQMASRNDRWF----GSGCSALPQHNDYKTCLAENMRTDFRKLEN 1959
             ++ L + E   S    +A  +  W     G G   + +++       E  RT    L  
Sbjct: 600  LKSSLENIEHNTSEVRTIAG-SGGWLEDITGPGTQLIEKNHLIDKFAPEPKRT----LNT 654

Query: 1960 GKFYSGKRQDTNSAGNQQLPVFGTNTFVSLPSL-KDISMNPTMLVNLIMEQQKLVADTQQ 2136
                     +  S  N+Q P+   N   SLP++ KDI +NPTML++L+MEQ++LV D Q 
Sbjct: 655  VSSSGSVNFNATSIRNEQAPITSNNVPSSLPAIFKDIVVNPTMLLSLLMEQKRLV-DAQN 713

Query: 2137 KPAQS---MTLPSISSVAIGT 2190
              A S   M  P+ S+ A+GT
Sbjct: 714  NSADSATNMLHPTSSNSAMGT 734


>ref|XP_004492029.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like isoform X2 [Cicer arietinum]
          Length = 1227

 Score =  168 bits (425), Expect = 1e-38
 Identities = 172/544 (31%), Positives = 257/544 (47%), Gaps = 34/544 (6%)
 Frame = +1

Query: 628  IREALDTATVKDPKESYNEVCSRFRISLESLQLMRLDNCVPVVDALIQQIFMGIQAVNSV 807
            IR+ L+  TV +  ES+ E  SR    L+S  L      V   D +I+ ++  I+ V+SV
Sbjct: 162  IRDFLEGVTVANVAESFAETISRLLRVLQSKLLS--GPAVSEKDYVIRLLYNAIEIVHSV 219

Query: 808  FYSMNPEQQEQDKDILLRLLTYVKDQDFALFASKQKKEIEAMIRCXXXXXXXXXXXXXXX 987
            F SM+  Q+E +KD ++RLL ++K++   LF+ +  KEI+ MI                 
Sbjct: 220  FCSMDNLQKEDNKDNIIRLLYFLKNEHTQLFSPEHMKEIQVMITAIDTVDALGNSVVVGN 279

Query: 988  XXXMDKKK-ERGVINGMKLNGLGNLDEDPSGHSLNSTKKFHLEPVSV-QYRDQNDSNMEF 1161
               +D    +   I G+K + L           ++S+K  H       +      SN+  
Sbjct: 280  GEKLDTLDIKTRQIQGLKASEL-----------ISSSKLVHSNLTEASEALLSGQSNI-- 326

Query: 1162 KTLKSKGYGGVGSL-NLPSDHDGDR----TLDTLQLFPIQNQSD-----------SATCT 1293
                 KG G +  L +L   HD D     T +    FP+                SA  T
Sbjct: 327  -----KGRGVMLPLFDLHKVHDLDSLPSPTREAPSFFPVNKLFSVGDGMDRPGLPSAGKT 381

Query: 1294 VSDK----TEDAAVLPYETDALRAVSTYQQRFN-SSFLLSNQLPSPTPSVECDDQDRDSS 1458
             + K    TE++    YETDAL+AVSTYQQ+F  SS+   ++ PSPTPS +C++   D++
Sbjct: 382  EAVKMELDTENSKNHLYETDALKAVSTYQQKFGRSSYFTDDKFPSPTPSGDCEEGVADAN 441

Query: 1459 GEVSISSTASSIKTENPSVPVQPFTYATPIVDCSSKQESIPAKTGQLGSCLNPILKAMPK 1638
             EVS +S A S+ +  P +   P +  +  VD SS    I ++     S   P+ K   +
Sbjct: 442  EEVSSASIAVSLTSSKPLLDQMPVSSTS--VDRSSMHGLINSRIEAASSVTYPV-KTSAR 498

Query: 1639 SKDPR--------RALDLKQQSLTVDYNVPKSEPIVGTMCSRKHKIVEESVLDGHNLKRQ 1794
            S+DPR         ALDL Q   T   N+PK E   G + SRK K  EE  LD    KR 
Sbjct: 499  SRDPRLRFINSDASALDLNQSLGT--NNMPKVEN-AGRVISRKQKTTEELSLDATAPKRL 555

Query: 1795 RNGLTSSEVPVSRNEQMASRNDRWFGSGCSALPQHNDYKTCLAENMRTDFRK-LENGKFY 1971
            R+ L +S    +R E+  + N  W      A   H   +  L +   T+ +K +     Y
Sbjct: 556  RSSLENSR-HNTREERTMAGNGGWLEENRVA-GSHLIERNHLMQKGETELKKTMSTSSGY 613

Query: 1972 SGKRQDTNSAGNQQLPVFGTNTFVSLPS-LKDISMNPTMLVNLIME-QQKLVADTQQKPA 2145
            S       S GN+Q PV  +NT  +LP  LK+I++NPTML+N+++E QQ+L A+  +KP 
Sbjct: 614  S----TVTSNGNEQAPVTVSNTAAALPGLLKNIAVNPTMLLNILLEQQQRLAAEANKKPV 669

Query: 2146 QSMT 2157
             S T
Sbjct: 670  DSAT 673


>ref|XP_004492028.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like isoform X1 [Cicer arietinum]
          Length = 1247

 Score =  168 bits (425), Expect = 1e-38
 Identities = 172/544 (31%), Positives = 257/544 (47%), Gaps = 34/544 (6%)
 Frame = +1

Query: 628  IREALDTATVKDPKESYNEVCSRFRISLESLQLMRLDNCVPVVDALIQQIFMGIQAVNSV 807
            IR+ L+  TV +  ES+ E  SR    L+S  L      V   D +I+ ++  I+ V+SV
Sbjct: 182  IRDFLEGVTVANVAESFAETISRLLRVLQSKLLS--GPAVSEKDYVIRLLYNAIEIVHSV 239

Query: 808  FYSMNPEQQEQDKDILLRLLTYVKDQDFALFASKQKKEIEAMIRCXXXXXXXXXXXXXXX 987
            F SM+  Q+E +KD ++RLL ++K++   LF+ +  KEI+ MI                 
Sbjct: 240  FCSMDNLQKEDNKDNIIRLLYFLKNEHTQLFSPEHMKEIQVMITAIDTVDALGNSVVVGN 299

Query: 988  XXXMDKKK-ERGVINGMKLNGLGNLDEDPSGHSLNSTKKFHLEPVSV-QYRDQNDSNMEF 1161
               +D    +   I G+K + L           ++S+K  H       +      SN+  
Sbjct: 300  GEKLDTLDIKTRQIQGLKASEL-----------ISSSKLVHSNLTEASEALLSGQSNI-- 346

Query: 1162 KTLKSKGYGGVGSL-NLPSDHDGDR----TLDTLQLFPIQNQSD-----------SATCT 1293
                 KG G +  L +L   HD D     T +    FP+                SA  T
Sbjct: 347  -----KGRGVMLPLFDLHKVHDLDSLPSPTREAPSFFPVNKLFSVGDGMDRPGLPSAGKT 401

Query: 1294 VSDK----TEDAAVLPYETDALRAVSTYQQRFN-SSFLLSNQLPSPTPSVECDDQDRDSS 1458
             + K    TE++    YETDAL+AVSTYQQ+F  SS+   ++ PSPTPS +C++   D++
Sbjct: 402  EAVKMELDTENSKNHLYETDALKAVSTYQQKFGRSSYFTDDKFPSPTPSGDCEEGVADAN 461

Query: 1459 GEVSISSTASSIKTENPSVPVQPFTYATPIVDCSSKQESIPAKTGQLGSCLNPILKAMPK 1638
             EVS +S A S+ +  P +   P +  +  VD SS    I ++     S   P+ K   +
Sbjct: 462  EEVSSASIAVSLTSSKPLLDQMPVSSTS--VDRSSMHGLINSRIEAASSVTYPV-KTSAR 518

Query: 1639 SKDPR--------RALDLKQQSLTVDYNVPKSEPIVGTMCSRKHKIVEESVLDGHNLKRQ 1794
            S+DPR         ALDL Q   T   N+PK E   G + SRK K  EE  LD    KR 
Sbjct: 519  SRDPRLRFINSDASALDLNQSLGT--NNMPKVEN-AGRVISRKQKTTEELSLDATAPKRL 575

Query: 1795 RNGLTSSEVPVSRNEQMASRNDRWFGSGCSALPQHNDYKTCLAENMRTDFRK-LENGKFY 1971
            R+ L +S    +R E+  + N  W      A   H   +  L +   T+ +K +     Y
Sbjct: 576  RSSLENSR-HNTREERTMAGNGGWLEENRVA-GSHLIERNHLMQKGETELKKTMSTSSGY 633

Query: 1972 SGKRQDTNSAGNQQLPVFGTNTFVSLPS-LKDISMNPTMLVNLIME-QQKLVADTQQKPA 2145
            S       S GN+Q PV  +NT  +LP  LK+I++NPTML+N+++E QQ+L A+  +KP 
Sbjct: 634  S----TVTSNGNEQAPVTVSNTAAALPGLLKNIAVNPTMLLNILLEQQQRLAAEANKKPV 689

Query: 2146 QSMT 2157
             S T
Sbjct: 690  DSAT 693


>ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Solanum lycopersicum]
          Length = 1211

 Score =  165 bits (418), Expect = 7e-38
 Identities = 172/556 (30%), Positives = 251/556 (45%), Gaps = 34/556 (6%)
 Frame = +1

Query: 628  IREALDTATVKDPKESYNEVCSRFRISLESLQLMRLDNCVPVVDALIQQIFMGIQAVNSV 807
            IRE L + T+ +  +S++ VCS+ + SL +L  + L       D LIQ     ++ +NSV
Sbjct: 154  IREQLQSVTLDETHKSFSMVCSKLQTSLLALGELALSQ--DKNDILIQLFMTALRTINSV 211

Query: 808  FYSMNPEQQEQDKDILLRLLTYVKDQDFALFASKQKKEIEAMIRCXXXXXXXXXXXXXXX 987
            FYSMN  Q++Q+ DIL RLL   K Q  AL +S+Q KE++A+I                 
Sbjct: 212  FYSMNDHQKQQNTDILSRLLFNAKTQLPALLSSEQLKELDALI------------LSINH 259

Query: 988  XXXMDKKKERGVINGMKLNGLGNL-DEDPSGHSLN----STKKFHLEPVSVQYRDQNDSN 1152
                   ++   +NG+ +  L ++ D   S  + N    S  K+ L  VS++     + +
Sbjct: 260  SLVSSNTQDNDTVNGINVVQLLDMKDSHKSSENANQDFTSVNKYDLGDVSIKSSGLKEQS 319

Query: 1153 MEFKTLK-----SKGYG-GVGSLNLPSDHDGDR----TLDTLQLFPIQN-----QSDSAT 1287
            +  +++K     SK  G     L+L  DHD D     T      FP        + D   
Sbjct: 320  VSSESVKPGLDNSKAKGLSFPLLDLHKDHDEDTLPSPTRQIGPQFPATQTHGMVKLDLPI 379

Query: 1288 CTVSDKTEDAAVLPYETDALRAVSTYQQRF-NSSFLLSNQLPSPTPSVECDDQDRDSSGE 1464
               S    ++ + PYETDAL+AVS+YQQ+F  SS  +S  LPSPTPS E D    D+ GE
Sbjct: 380  FPASLDKGNSLLHPYETDALKAVSSYQQKFGRSSLFVSENLPSPTPSEEDDSGKGDTGGE 439

Query: 1465 VSISSTASSIKTENPSVPVQPFTYATPIVDCSSKQESIPAKTGQLGSCL-NPILK-AMPK 1638
            V+      +    N S   QP   + P  +    Q     +T    S L NP L+ +  K
Sbjct: 440  VTSFDVVHNASHLNESSMGQPILSSVPQTNILDGQGLGTTRTADPLSFLPNPSLRSSTAK 499

Query: 1639 SKDPRRALDLKQQSLTVDYN----VP----KSEPIVGTMCSRKHKIVEESVLDGHNLKRQ 1794
            S+DPR  L     S TV  N    +P    K E  +  + S+K K V+ S  D    KRQ
Sbjct: 500  SRDPRLRL---ATSDTVAQNTILPIPDIDLKLEASLEMIVSKKQKTVDLSAFDAPLPKRQ 556

Query: 1795 RNGLTSSEVPVSRNEQMASRNDRWF-GSGCSALPQHNDYKTCLAENMRTDFRKLENGKFY 1971
            R+  T S +       +   N  W    G + LP  +    C   N   D RKLE     
Sbjct: 557  RSEQTDSIIVSDVRPSIG--NGGWLEDRGTAELPITS--SNCATYNSDNDIRKLEQVTAT 612

Query: 1972 SGKRQDTNSAGNQQLPVFGTNTFVSLPS-LKDISMNPTMLVNLI-MEQQKLVADTQQKPA 2145
                        +  PV G +T  +L S LKDI++NP++ +N+I  EQQK    ++   A
Sbjct: 613  IATIPSVIVNAAENFPVTGISTSTTLHSLLKDIAINPSIWMNIIKTEQQKSADASRTNTA 672

Query: 2146 QSMTLPSISSVAIGTV 2193
            Q+ +  SI      TV
Sbjct: 673  QASSSKSILGAVPSTV 688


>gb|AAV92930.1| putative transcription regulator CPL1 [Solanum lycopersicum]
          Length = 1227

 Score =  165 bits (418), Expect = 7e-38
 Identities = 172/556 (30%), Positives = 251/556 (45%), Gaps = 34/556 (6%)
 Frame = +1

Query: 628  IREALDTATVKDPKESYNEVCSRFRISLESLQLMRLDNCVPVVDALIQQIFMGIQAVNSV 807
            IRE L + T+ +  +S++ VCS+ + SL +L  + L       D LIQ     ++ +NSV
Sbjct: 154  IREQLQSVTLDETHKSFSMVCSKLQTSLLALGELALSQ--DKNDILIQLFMTALRTINSV 211

Query: 808  FYSMNPEQQEQDKDILLRLLTYVKDQDFALFASKQKKEIEAMIRCXXXXXXXXXXXXXXX 987
            FYSMN  Q++Q+ DIL RLL   K Q  AL +S+Q KE++A+I                 
Sbjct: 212  FYSMNDHQKQQNTDILSRLLFNAKTQLPALLSSEQLKELDALI------------LSINH 259

Query: 988  XXXMDKKKERGVINGMKLNGLGNL-DEDPSGHSLN----STKKFHLEPVSVQYRDQNDSN 1152
                   ++   +NG+ +  L ++ D   S  + N    S  K+ L  VS++     + +
Sbjct: 260  SLVSSNTQDNDTVNGINVVQLLDMKDSHKSSENANQDFTSVNKYDLGDVSIKSSGLKEQS 319

Query: 1153 MEFKTLK-----SKGYG-GVGSLNLPSDHDGDR----TLDTLQLFPIQN-----QSDSAT 1287
            +  +++K     SK  G     L+L  DHD D     T      FP        + D   
Sbjct: 320  VSSESVKPGLDNSKAKGLSFPLLDLHKDHDEDTLPSPTRQIGPQFPATQTHGMVKLDLPI 379

Query: 1288 CTVSDKTEDAAVLPYETDALRAVSTYQQRF-NSSFLLSNQLPSPTPSVECDDQDRDSSGE 1464
               S    ++ + PYETDAL+AVS+YQQ+F  SS  +S  LPSPTPS E D    D+ GE
Sbjct: 380  FPASLDKGNSLLHPYETDALKAVSSYQQKFGRSSLFVSENLPSPTPSEEDDSGKGDTGGE 439

Query: 1465 VSISSTASSIKTENPSVPVQPFTYATPIVDCSSKQESIPAKTGQLGSCL-NPILK-AMPK 1638
            V+      +    N S   QP   + P  +    Q     +T    S L NP L+ +  K
Sbjct: 440  VTSFDVVHNASHLNESSMGQPILSSVPQTNILDGQGLGTTRTADPLSFLPNPSLRSSTAK 499

Query: 1639 SKDPRRALDLKQQSLTVDYN----VP----KSEPIVGTMCSRKHKIVEESVLDGHNLKRQ 1794
            S+DPR  L     S TV  N    +P    K E  +  + S+K K V+ S  D    KRQ
Sbjct: 500  SRDPRLRL---ATSDTVAQNTILPIPDIDLKLEASLEMIVSKKQKTVDLSAFDAPLPKRQ 556

Query: 1795 RNGLTSSEVPVSRNEQMASRNDRWF-GSGCSALPQHNDYKTCLAENMRTDFRKLENGKFY 1971
            R+  T S +       +   N  W    G + LP  +    C   N   D RKLE     
Sbjct: 557  RSEQTDSIIVSDVRPSIG--NGGWLEDRGTAELPITS--SNCATYNSDNDIRKLEQVTAT 612

Query: 1972 SGKRQDTNSAGNQQLPVFGTNTFVSLPS-LKDISMNPTMLVNLI-MEQQKLVADTQQKPA 2145
                        +  PV G +T  +L S LKDI++NP++ +N+I  EQQK    ++   A
Sbjct: 613  IATIPSVIVNAAENFPVTGISTSTTLHSLLKDIAINPSIWMNIIKTEQQKSADASRTNTA 672

Query: 2146 QSMTLPSISSVAIGTV 2193
            Q+ +  SI      TV
Sbjct: 673  QASSSKSILGAVPSTV 688


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