BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00012188
         (214 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ...    61   1e-07
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]    61   1e-07
ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [The...    57   3e-06

>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
           gi|296081598|emb|CBI20603.3| unnamed protein product
           [Vitis vinifera]
          Length = 561

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 29/69 (42%), Positives = 47/69 (68%)
 Frame = -1

Query: 208 EEMKMKIGRGSHRTLYNPIDDTSVSIQDDTSTSYPMLQVNKTSHFSSLMENIEKIDEIFV 29
           E MKMKIG+ SH  L+  ++ +   I +D S S   LQ +K S FS L+EN++ ++E+F 
Sbjct: 83  EAMKMKIGKCSHGDLFKIVNASQAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFA 142

Query: 28  DADVVKLEK 2
           D+++V+LE+
Sbjct: 143 DSNMVRLER 151


>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
          Length = 611

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 29/69 (42%), Positives = 47/69 (68%)
 Frame = -1

Query: 208 EEMKMKIGRGSHRTLYNPIDDTSVSIQDDTSTSYPMLQVNKTSHFSSLMENIEKIDEIFV 29
           E MKMKIG+ SH  L+  ++ +   I +D S S   LQ +K S FS L+EN++ ++E+F 
Sbjct: 133 EAMKMKIGKCSHGDLFKIVNASQAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFA 192

Query: 28  DADVVKLEK 2
           D+++V+LE+
Sbjct: 193 DSNMVRLER 201


>ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
           gi|508782582|gb|EOY29838.1| RNApolymerase sigma-subunit
           C, putative [Theobroma cacao]
          Length = 848

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
 Frame = -1

Query: 208 EEMKMKIGRGS--HRTLYNPIDDTSVSIQDDTSTSYPMLQVNKTSHFSSLMENIEKIDEI 35
           EEMK+ IG+GS  H      ID T   I  D S+S    Q  K SH+S LMEN++ ++E 
Sbjct: 369 EEMKVNIGKGSQAHSHSLTMIDKTHELIGGDKSSSRTSPQACKASHYSLLMENLDVLEET 428

Query: 34  FVDADVVKLEK 2
           F D+DV+ LE+
Sbjct: 429 FADSDVLTLER 439