BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00012006
         (1952 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt...   589   e-165
emb|CBI34194.3| unnamed protein product [Vitis vinifera]              575   e-161
ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synt...   575   e-161
ref|XP_004302031.1| PREDICTED: multisubstrate pseudouridine synt...   568   e-159
ref|XP_004302030.1| PREDICTED: multisubstrate pseudouridine synt...   555   e-155
ref|XP_006432989.1| hypothetical protein CICLE_v10003382mg [Citr...   553   e-155
ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Popu...   553   e-155
ref|XP_007030612.1| Pseudouridine synthase family protein isofor...   553   e-155
ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ric...   548   e-153
ref|XP_006347775.1| PREDICTED: multisubstrate pseudouridine synt...   547   e-153
ref|XP_007208186.1| hypothetical protein PRUPE_ppa020985mg [Prun...   543   e-152
ref|XP_004230110.1| PREDICTED: multisubstrate pseudouridine synt...   543   e-151
gb|EXB39195.1| Multisubstrate pseudouridine synthase 7 [Morus no...   539   e-150
ref|XP_007030611.1| Pseudouridine synthase family protein, putat...   534   e-149
gb|EYU22643.1| hypothetical protein MIMGU_mgv1a002284mg [Mimulus...   533   e-149
ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana] g...   525   e-146
ref|XP_006577278.1| PREDICTED: multisubstrate pseudouridine synt...   518   e-144
ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C...   518   e-144
ref|XP_004494684.1| PREDICTED: multisubstrate pseudouridine synt...   516   e-143
ref|XP_006604840.1| PREDICTED: multisubstrate pseudouridine synt...   514   e-143

>ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Vitis
            vinifera]
          Length = 694

 Score =  589 bits (1518), Expect = e-165
 Identities = 298/429 (69%), Positives = 343/429 (79%), Gaps = 6/429 (1%)
 Frame = +3

Query: 3    YVREGLLLGQLQGNRFTITLRGVVADSEDTIKAAADSLGKNGFINYFGLQRFGSGSVPTH 182
            +VREGL+LGQL GNRFTITLRGVVADSE+TIKA+AD+LG+ GFINYFGLQRFGSGSVPTH
Sbjct: 263  HVREGLVLGQLLGNRFTITLRGVVADSEETIKASADALGRLGFINYFGLQRFGSGSVPTH 322

Query: 183  FIGAALLRGEWNAAVSMILDPREGERDIIREAREYYKESCDIEGTLRRLPRYLVAERAVL 362
             IGAALLRGEW  AVS+ILDPREGERD IR+AREYYKES DIEGTLR+ PR+LVAERA+L
Sbjct: 323  LIGAALLRGEWETAVSLILDPREGERDAIRKAREYYKESDDIEGTLRQFPRHLVAERAIL 382

Query: 363  QCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASNRVQKHGIGQVVLGDLVYCKG 542
            QCLKK PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS RVQ +G  QVVLGDLVYCKG
Sbjct: 383  QCLKKYPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGTKQVVLGDLVYCKG 442

Query: 543  GSAERVIEAVDIECEDASCNETCDFNHLDEISETAAPEKKDNPVKAVDVEDLLNGDYTIE 722
             +AE+V   V+ E +D  C++  D +H DEISET  PE++++PVKA+D EDLL G+YTI+
Sbjct: 443  DNAEKVTRVVNSEFDDDGCSDAFDSSHFDEISETDLPEERNDPVKALDAEDLLTGNYTID 502

Query: 723  DVILPLPGSRVMYPMNDIAEDYHDLAKKDGISLTDCVHSAKEFSITNMTGAYRRVFQKPI 902
            DV+LPLPGSR +YP NDIA+ YHD AKKD ISLT+  HS KEFSITNMTG +RRVFQKPI
Sbjct: 503  DVVLPLPGSRAIYPTNDIAQVYHDFAKKDAISLTESAHSVKEFSITNMTGGFRRVFQKPI 562

Query: 903  DFEWELIQYTDANVPLVETDLDIIAKSK--SVTGEENDPN----TLSVNCKTQAENIKNG 1064
            DFEWEL+ YT+ N+PL ETD D I KSK  ++ G E+  N      S  C  Q+E+ ++ 
Sbjct: 563  DFEWELLTYTEGNIPLAETDWDKITKSKPSNIIGGEDSRNGNEKENSFQCMKQSESFEHN 622

Query: 1065 TTPLTYGNEAEVDGEVGVPQISSICTTDAQSPQMALKLGFTLPASCYATMAIRELLKTST 1244
                T  NE     E+G+PQ+     + A   Q ALKL FTLPASCYATMAIRELLKTST
Sbjct: 623  VNLSTDNNEPNGVTEIGLPQVEPQFESGAPEAQRALKLSFTLPASCYATMAIRELLKTST 682

Query: 1245 SVTFHKTLN 1271
            SV F KTLN
Sbjct: 683  SVAFQKTLN 691


>emb|CBI34194.3| unnamed protein product [Vitis vinifera]
          Length = 693

 Score =  575 bits (1483), Expect = e-161
 Identities = 293/429 (68%), Positives = 341/429 (79%), Gaps = 6/429 (1%)
 Frame = +3

Query: 3    YVREGLLLGQLQGNRFTITLRGVVADSEDTIKAAADSLGKNGFINYFGLQRFGSGSVPTH 182
            +VREGL+LGQL GNRFTITLRGVVADSE+TIKA+AD+LG+ GFINYFGLQRFGSGSVPTH
Sbjct: 263  HVREGLVLGQLLGNRFTITLRGVVADSEETIKASADALGRLGFINYFGLQRFGSGSVPTH 322

Query: 183  FIGAALLRGEWNAAVSMILDPREGERDIIREAREYYKESCDIEGTLRRLPRYLVAERAVL 362
             IGAALLRGEW  AVS+ILDPREG+  ++ +AREYYKES DIEGTLR+ PR+LVAERA+L
Sbjct: 323  LIGAALLRGEWETAVSLILDPREGDI-LLLKAREYYKESDDIEGTLRQFPRHLVAERAIL 381

Query: 363  QCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASNRVQKHGIGQVVLGDLVYCKG 542
            QCLKK PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS RVQ +G  QVVLGDLVYCKG
Sbjct: 382  QCLKKYPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGTKQVVLGDLVYCKG 441

Query: 543  GSAERVIEAVDIECEDASCNETCDFNHLDEISETAAPEKKDNPVKAVDVEDLLNGDYTIE 722
             +AE+V   V+ E +D  C++  D +H DEISET  PE++++PVKA+D EDLL G+YTI+
Sbjct: 442  DNAEKVTRVVNSEFDDDGCSDAFDSSHFDEISETDLPEERNDPVKALDAEDLLTGNYTID 501

Query: 723  DVILPLPGSRVMYPMNDIAEDYHDLAKKDGISLTDCVHSAKEFSITNMTGAYRRVFQKPI 902
            DV+LPLPGSR +YP NDIA+ YHD AKKD ISLT+  HS KEFSITNMTG +RRVFQKPI
Sbjct: 502  DVVLPLPGSRAIYPTNDIAQVYHDFAKKDAISLTESAHSVKEFSITNMTGGFRRVFQKPI 561

Query: 903  DFEWELIQYTDANVPLVETDLDIIAKSK--SVTGEENDPN----TLSVNCKTQAENIKNG 1064
            DFEWEL+ YT+ N+PL ETD D I KSK  ++ G E+  N      S  C  Q+E+ ++ 
Sbjct: 562  DFEWELLTYTEGNIPLAETDWDKITKSKPSNIIGGEDSRNGNEKENSFQCMKQSESFEHN 621

Query: 1065 TTPLTYGNEAEVDGEVGVPQISSICTTDAQSPQMALKLGFTLPASCYATMAIRELLKTST 1244
                T  NE     E+G+PQ+     + A   Q ALKL FTLPASCYATMAIRELLKTST
Sbjct: 622  VNLSTDNNEPNGVTEIGLPQVEPQFESGAPEAQRALKLSFTLPASCYATMAIRELLKTST 681

Query: 1245 SVTFHKTLN 1271
            SV F KTLN
Sbjct: 682  SVAFQKTLN 690


>ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
            [Citrus sinensis]
          Length = 739

 Score =  575 bits (1482), Expect = e-161
 Identities = 291/433 (67%), Positives = 341/433 (78%), Gaps = 10/433 (2%)
 Frame = +3

Query: 3    YVREGLLLGQLQGNRFTITLRGVVADSEDTIKAAADSLGKNGFINYFGLQRFGSGSVPTH 182
            YV+EGLLLGQL GNRFTITLRGVV DSED IKA+A+SLG+NGFINYFGLQRFGSGSVPTH
Sbjct: 311  YVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLGRNGFINYFGLQRFGSGSVPTH 370

Query: 183  FIGAALLRGEWNAAVSMILDPREGERDIIREAREYYKESCDIEGTLRRLPRYLVAERAVL 362
             +GA LLRGEW +AV MILDPREGER+ I +AREYYKE+ DI+GTLR+LPR+LVAERA+L
Sbjct: 371  LVGATLLRGEWKSAVKMILDPREGERNEISKAREYYKETDDIDGTLRKLPRHLVAERAIL 430

Query: 363  QCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASNRVQKHGIGQVVLGDLVYCKG 542
            QCLKKCPGNYLQALKAIPRTLRMMYVHSYQS+LWNHAAS RVQKHG   VV+GDLV+CKG
Sbjct: 431  QCLKKCPGNYLQALKAIPRTLRMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLVFCKG 490

Query: 543  GSAERVIEAVDIECEDASCNETCDFNHLDEISETAAPEKKDNPVKAVDVEDLLNGDYTIE 722
               E+ +  V+ E E  S N+  D +HLDE+ ET  P+ + N VK V  ED+ +G YTI+
Sbjct: 491  DDTEKELGCVNPEFEYESSNDADDSSHLDEVPETDHPDGRHNLVKTVTAEDINSGKYTID 550

Query: 723  DVILPLPGSRVMYPMNDIAEDYHDLAKKDGISLTDCVHSAKEFSITNMTGAYRRVFQKPI 902
            DV+LPLPGSRV+YPMND+AE YH LA+KDGI+LT+ +H+ KEFSIT+MTG YRRVFQKP+
Sbjct: 551  DVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLTESLHNVKEFSITSMTGNYRRVFQKPM 610

Query: 903  DFEWELIQYTDANVPLVETDLDIIAKSK---------SVTG-EENDPNTLSVNCKTQAEN 1052
            DFEWEL+ Y D N PL ETDLD IAK K         +V G ++ DP+    +C  Q+E+
Sbjct: 611  DFEWELLTYIDGNKPLAETDLDKIAKDKLANIVKEEEAVCGNKKKDPS----DCMKQSES 666

Query: 1053 IKNGTTPLTYGNEAEVDGEVGVPQISSICTTDAQSPQMALKLGFTLPASCYATMAIRELL 1232
            +       T  NEA    EV  P + S+C  D+Q  QMALKLG TLP+SCYATMAIRELL
Sbjct: 667  LSKDIKLSTENNEAACAKEVKQPHVESVCGADSQGKQMALKLGLTLPSSCYATMAIRELL 726

Query: 1233 KTSTSVTFHKTLN 1271
            KTSTSV FHKTLN
Sbjct: 727  KTSTSVAFHKTLN 739


>ref|XP_004302031.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform 2
            [Fragaria vesca subsp. vesca]
          Length = 693

 Score =  568 bits (1464), Expect = e-159
 Identities = 288/433 (66%), Positives = 342/433 (78%), Gaps = 10/433 (2%)
 Frame = +3

Query: 3    YVREGLLLGQLQGNRFTITLRGVVADSEDTIKAAADSLGKNGFINYFGLQRFGSGSVPTH 182
            YV+EGL LGQL GNRFTITLRGVVADSED I+A+A++LGK GF+NYFGLQRFGSGS+PTH
Sbjct: 262  YVKEGLSLGQLLGNRFTITLRGVVADSEDIIQASANALGKQGFVNYFGLQRFGSGSIPTH 321

Query: 183  FIGAALLRGEWNAAVSMILDPREGERDIIREAREYYKESCDIEGTLRRLPRYLVAERAVL 362
             IGA+LLRGEW + VSM+L+PREGERD+I EAR+YYKES DI+GTLR+LPRYLVAERAVL
Sbjct: 322  LIGASLLRGEWKSTVSMMLEPREGERDVITEARKYYKESNDIDGTLRKLPRYLVAERAVL 381

Query: 363  QCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASNRVQKHGIGQVVLGDLVYCKG 542
            QCLKKCPGNY QALKA+PRTLRMMYVHSYQSYLWNHAAS RVQK+G  +VV+GDLVYCKG
Sbjct: 382  QCLKKCPGNYSQALKAVPRTLRMMYVHSYQSYLWNHAASMRVQKYGTDRVVVGDLVYCKG 441

Query: 543  GSAERVIEAVDIEC-----EDASCNETCDFNHLDEISETAAPEKKDNPVKAVDVEDLLNG 707
               E+V   V  EC      D +C++T D NHLD+ISET  PE + + VKAV  ED+ NG
Sbjct: 442  HETEKVTGIVSSECVDENVNDENCDDTFDPNHLDDISETNVPEARVSLVKAVTAEDINNG 501

Query: 708  DYTIEDVILPLPGSRVMYPMNDIAEDYHDLAKKDGISLTDCVHSAKEFSITNMTGAYRRV 887
             YTI+D++LPLPGSRV++P NDIA  +HDLAKKDGISLT+ VH+ KEFSITN+TG+YRRV
Sbjct: 502  TYTIDDIVLPLPGSRVIFPENDIAAVFHDLAKKDGISLTESVHNVKEFSITNVTGSYRRV 561

Query: 888  FQKPIDFEWELIQYTDANVPLVETDLDIIAKSKSVTGEENDPNTLSVNCK-----TQAEN 1052
            FQKP+DFEW++++Y D N+PLVETD + IAK+K V   +  P  +S +        Q+E 
Sbjct: 562  FQKPVDFEWDILKYIDGNIPLVETDFEKIAKTKPVNVNKEYPTGVSGDGSLHDRIKQSEC 621

Query: 1053 IKNGTTPLTYGNEAEVDGEVGVPQISSICTTDAQSPQMALKLGFTLPASCYATMAIRELL 1232
              N        NE E +GE  +P + S+     Q  Q+ALKL FTLPASCYATMAIRELL
Sbjct: 622  SVNDVQLPKKDNEVESEGE-KLPHVESLGGPIPQGTQIALKLSFTLPASCYATMAIRELL 680

Query: 1233 KTSTSVTFHKTLN 1271
            KTSTSV FHKTLN
Sbjct: 681  KTSTSVAFHKTLN 693


>ref|XP_004302030.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform 1
            [Fragaria vesca subsp. vesca]
          Length = 701

 Score =  555 bits (1430), Expect = e-155
 Identities = 282/426 (66%), Positives = 336/426 (78%), Gaps = 10/426 (2%)
 Frame = +3

Query: 3    YVREGLLLGQLQGNRFTITLRGVVADSEDTIKAAADSLGKNGFINYFGLQRFGSGSVPTH 182
            YV+EGL LGQL GNRFTITLRGVVADSED I+A+A++LGK GF+NYFGLQRFGSGS+PTH
Sbjct: 262  YVKEGLSLGQLLGNRFTITLRGVVADSEDIIQASANALGKQGFVNYFGLQRFGSGSIPTH 321

Query: 183  FIGAALLRGEWNAAVSMILDPREGERDIIREAREYYKESCDIEGTLRRLPRYLVAERAVL 362
             IGA+LLRGEW + VSM+L+PREGERD+I EAR+YYKES DI+GTLR+LPRYLVAERAVL
Sbjct: 322  LIGASLLRGEWKSTVSMMLEPREGERDVITEARKYYKESNDIDGTLRKLPRYLVAERAVL 381

Query: 363  QCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASNRVQKHGIGQVVLGDLVYCKG 542
            QCLKKCPGNY QALKA+PRTLRMMYVHSYQSYLWNHAAS RVQK+G  +VV+GDLVYCKG
Sbjct: 382  QCLKKCPGNYSQALKAVPRTLRMMYVHSYQSYLWNHAASMRVQKYGTDRVVVGDLVYCKG 441

Query: 543  GSAERVIEAVDIEC-----EDASCNETCDFNHLDEISETAAPEKKDNPVKAVDVEDLLNG 707
               E+V   V  EC      D +C++T D NHLD+ISET  PE + + VKAV  ED+ NG
Sbjct: 442  HETEKVTGIVSSECVDENVNDENCDDTFDPNHLDDISETNVPEARVSLVKAVTAEDINNG 501

Query: 708  DYTIEDVILPLPGSRVMYPMNDIAEDYHDLAKKDGISLTDCVHSAKEFSITNMTGAYRRV 887
             YTI+D++LPLPGSRV++P NDIA  +HDLAKKDGISLT+ VH+ KEFSITN+TG+YRRV
Sbjct: 502  TYTIDDIVLPLPGSRVIFPENDIAAVFHDLAKKDGISLTESVHNVKEFSITNVTGSYRRV 561

Query: 888  FQKPIDFEWELIQYTDANVPLVETDLDIIAKSKSVTGEENDPNTLSVNCK-----TQAEN 1052
            FQKP+DFEW++++Y D N+PLVETD + IAK+K V   +  P  +S +        Q+E 
Sbjct: 562  FQKPVDFEWDILKYIDGNIPLVETDFEKIAKTKPVNVNKEYPTGVSGDGSLHDRIKQSEC 621

Query: 1053 IKNGTTPLTYGNEAEVDGEVGVPQISSICTTDAQSPQMALKLGFTLPASCYATMAIRELL 1232
              N        NE E +GE  +P + S+     Q  Q+ALKL FTLPASCYATMAIRELL
Sbjct: 622  SVNDVQLPKKDNEVESEGE-KLPHVESLGGPIPQGTQIALKLSFTLPASCYATMAIRELL 680

Query: 1233 KTSTSV 1250
            KTSTSV
Sbjct: 681  KTSTSV 686


>ref|XP_006432989.1| hypothetical protein CICLE_v10003382mg [Citrus clementina]
            gi|557535111|gb|ESR46229.1| hypothetical protein
            CICLE_v10003382mg [Citrus clementina]
          Length = 697

 Score =  553 bits (1426), Expect = e-155
 Identities = 282/427 (66%), Positives = 335/427 (78%), Gaps = 10/427 (2%)
 Frame = +3

Query: 3    YVREGLLLGQLQGNRFTITLRGVVADSEDTIKAAADSLGKNGFINYFGLQRFGSGSVPTH 182
            YV+EGLLLGQL GNRFTITLRGVV DSED IKA+A+SLG+NGFINYFGLQRFGSGSVPTH
Sbjct: 267  YVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLGRNGFINYFGLQRFGSGSVPTH 326

Query: 183  FIGAALLRGEWNAAVSMILDPREGERDIIREAREYYKESCDIEGTLRRLPRYLVAERAVL 362
             +GA LLRGEW +AV MILDPREG+  ++ +AREYYKE+ DI+GTLR+LPR+LVAERA+L
Sbjct: 327  LVGATLLRGEWKSAVKMILDPREGDI-LLFKAREYYKETDDIDGTLRKLPRHLVAERAIL 385

Query: 363  QCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASNRVQKHGIGQVVLGDLVYCKG 542
            QCLKKCPGNYLQALKAIPRTLRMMYVHSYQS+LWNHAAS RVQKHG   VV+GDLV+CKG
Sbjct: 386  QCLKKCPGNYLQALKAIPRTLRMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLVFCKG 445

Query: 543  GSAERVIEAVDIECEDASCNETCDFNHLDEISETAAPEKKDNPVKAVDVEDLLNGDYTIE 722
               E+ +  V+ E E  S N+  D +HLDE+ ET  P+ + N VK V  ED+ +G YTI+
Sbjct: 446  DDTEKELGCVNPEFEYESSNDADDSSHLDEVPETDHPDGRHNLVKTVTAEDINSGKYTID 505

Query: 723  DVILPLPGSRVMYPMNDIAEDYHDLAKKDGISLTDCVHSAKEFSITNMTGAYRRVFQKPI 902
            DV+LPLPGSRV+YPMND+AE YH LA+KDGI+LT+ +H+ KEFSIT+MTG YRRVFQKP+
Sbjct: 506  DVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLTESLHNVKEFSITSMTGNYRRVFQKPM 565

Query: 903  DFEWELIQYTDANVPLVETDLDIIAKSK---------SVTG-EENDPNTLSVNCKTQAEN 1052
            DFEWEL+ Y D N PL ETDLD IAK K         +V G ++ DP+    +C  Q+E+
Sbjct: 566  DFEWELLTYIDGNKPLAETDLDKIAKDKLANIVKEEEAVCGNKKKDPS----DCMKQSES 621

Query: 1053 IKNGTTPLTYGNEAEVDGEVGVPQISSICTTDAQSPQMALKLGFTLPASCYATMAIRELL 1232
            +       T  NEA    EV  P + S+C  D+Q  QMALKLG TLP+SCYATMAIRELL
Sbjct: 622  LSKDIKLSTENNEAACAKEVKQPHVESVCGADSQGKQMALKLGLTLPSSCYATMAIRELL 681

Query: 1233 KTSTSVT 1253
            KTSTSV+
Sbjct: 682  KTSTSVS 688


>ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Populus trichocarpa]
            gi|550338143|gb|ERP60572.1| hypothetical protein
            POPTR_0005s05300g [Populus trichocarpa]
          Length = 752

 Score =  553 bits (1426), Expect = e-155
 Identities = 285/435 (65%), Positives = 342/435 (78%), Gaps = 12/435 (2%)
 Frame = +3

Query: 3    YVREGLLLGQLQGNRFTITLRGVVADSEDTIKAAADSLGKNGFINYFGLQRFGSGSVPTH 182
            +V+EGLLLG+L GNRFT+TLRGV+ADSEDTIKAAADSLG++GFINYFGLQRFG+GSVPTH
Sbjct: 322  HVKEGLLLGRLLGNRFTVTLRGVIADSEDTIKAAADSLGRHGFINYFGLQRFGTGSVPTH 381

Query: 183  FIGAALLRGEWNAAVSMILDPREGE-----RDIIREAREYYKESCDIEGTLRRLPRYLVA 347
             IGAALLRGEW  AVSMILDPREG+       +IR+AREYYKES DIEGTLR+LPR+LVA
Sbjct: 382  LIGAALLRGEWKTAVSMILDPREGDILLLFPYVIRKAREYYKESNDIEGTLRQLPRHLVA 441

Query: 348  ERAVLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASNRVQKHGIGQVVLGDL 527
            ERAVLQCLKKCPG+YLQA+KAIPRTLRMMYVH YQSYLWNHAAS RVQK+G  QV+LGDL
Sbjct: 442  ERAVLQCLKKCPGDYLQAMKAIPRTLRMMYVHGYQSYLWNHAASERVQKYGFDQVLLGDL 501

Query: 528  VYCKGGSAERVIEAVDIECEDASCNETCDFNHLDEISETAAPEKKDNPVKAVDVEDLLNG 707
            VYCKG  +E+    V+ EC D +C++T D +HLDE S T   E+K+  VK V VED+  G
Sbjct: 502  VYCKGDDSEKETVGVNSECNDDNCDDTYDCSHLDETSGTDLLERKNTLVKVVTVEDMSTG 561

Query: 708  DYTIEDVILPLPGSRVMYPMNDIAEDYHDLAKKDGISLTDCVHSAKEFSITNMTGAYRRV 887
            +YT++DV+LP+PGSRV++P N+IA+ YHDLAKKD I+LT+ VH  KEFSIT+MTG+YRRV
Sbjct: 562  NYTVDDVVLPMPGSRVIFPTNEIAKVYHDLAKKDAINLTESVHRVKEFSITSMTGSYRRV 621

Query: 888  FQKPIDFEWELIQYTDANVPLVETDLDIIAKSKSVT-------GEENDPNTLSVNCKTQA 1046
            FQKP+DFEWEL+ Y D+N PL ETDLD I+K+ S         G+ ++ N LS +C T+ 
Sbjct: 622  FQKPLDFEWELLTYNDSNKPLAETDLDKISKTGSTNIIKQEEQGKGDEDNDLS-DC-TKL 679

Query: 1047 ENIKNGTTPLTYGNEAEVDGEVGVPQISSICTTDAQSPQMALKLGFTLPASCYATMAIRE 1226
                  +  L+     E + EV   Q+S    ++ Q  QMALKL  TLPASCYATMAIRE
Sbjct: 680  PVCSRNSIALSSDTNEESEREVESEQVSG---SNWQETQMALKLSLTLPASCYATMAIRE 736

Query: 1227 LLKTSTSVTFHKTLN 1271
            LLKTSTSV +HKTLN
Sbjct: 737  LLKTSTSVAYHKTLN 751


>ref|XP_007030612.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
            gi|508719217|gb|EOY11114.1| Pseudouridine synthase family
            protein isoform 2 [Theobroma cacao]
          Length = 732

 Score =  553 bits (1426), Expect = e-155
 Identities = 283/429 (65%), Positives = 338/429 (78%), Gaps = 6/429 (1%)
 Frame = +3

Query: 3    YVREGLLLGQLQGNRFTITLRGVVADSEDTIKAAADSLGKNGFINYFGLQRFGSGSVPTH 182
            YV++  LLGQL GNRFTI LRG+VADSE+TIKA+ +SLG++GFINYFGLQRFGSGS+PTH
Sbjct: 304  YVKDDFLLGQLLGNRFTIILRGIVADSEETIKASVESLGRHGFINYFGLQRFGSGSIPTH 363

Query: 183  FIGAALLRGEWNAAVSMILDPREGERDIIREAREYYKESCDIEGTLRRLPRYLVAERAVL 362
             IGA LLRGEW AA S ILDPREGERD + +AREYYKE+ DIEGTLR+LPR+LVAERA+L
Sbjct: 364  RIGATLLRGEWQAAASTILDPREGERDFVSKAREYYKETGDIEGTLRQLPRHLVAERAML 423

Query: 363  QCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASNRVQKHGIGQVVLGDLVYCKG 542
            QCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS RV+K+G  +VVLGDLVYCKG
Sbjct: 424  QCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVEKYGSNEVVLGDLVYCKG 483

Query: 543  GSAERVIEAVDIECEDASCNETCDFNHLDEISETAAPEKKDNPVKAVDVEDLLNGDYTIE 722
              AE+V + V  E ED +  +  D + LDEIS T  PE K+N VKA+   D+  G+YTIE
Sbjct: 484  NDAEKV-KVVPSEHEDNNFEDAYDCSQLDEISGTDLPEGKNNLVKAITAADISTGNYTIE 542

Query: 723  DVILPLPGSRVMYPMNDIAEDYHDLAKKDGISLTDCVHSAKEFSITNMTGAYRRVFQKPI 902
            DV+LP+PGSR++YP+NDIA  YHD+AKKDGISLT+ VH+ KEFSIT+MTG+YRRVFQKPI
Sbjct: 543  DVVLPMPGSRIIYPVNDIANVYHDMAKKDGISLTESVHNIKEFSITSMTGSYRRVFQKPI 602

Query: 903  DFEWELIQYTDANVPLVETDLDIIAKSKSVTGEENDPNTLSVNCKTQAENIKN-----GT 1067
            DFEWEL+ YTD ++ L ETDLD IAK+K V   + +  T     +  ++++++       
Sbjct: 603  DFEWELLSYTDGSIALSETDLDKIAKTKPVNLVKEEKPTDGTEGQDSSDHMEHIESFEDD 662

Query: 1068 TPLTYGN-EAEVDGEVGVPQISSICTTDAQSPQMALKLGFTLPASCYATMAIRELLKTST 1244
               + GN E E   E   PQI S+  +++   Q ALKL FTLPASCYATMAIRELLKTST
Sbjct: 663  KKFSTGNVEVEGSREAEPPQIHSLPESNSLGTQKALKLAFTLPASCYATMAIRELLKTST 722

Query: 1245 SVTFHKTLN 1271
            SV FHKTLN
Sbjct: 723  SVAFHKTLN 731


>ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ricinus communis]
            gi|223548191|gb|EEF49682.1| tRNA pseudouridine synthase
            d, putative [Ricinus communis]
          Length = 753

 Score =  548 bits (1411), Expect = e-153
 Identities = 287/441 (65%), Positives = 338/441 (76%), Gaps = 18/441 (4%)
 Frame = +3

Query: 3    YVREGLLLGQLQGNRFTITLRGVVADSEDTIKAAADSLGKNGFINYFGLQRFGSGSVPTH 182
            YV EGLLLGQL GNRFT+TLRGVVADSEDTIK +ADSLG++GFINYFGLQRFGSGSVPTH
Sbjct: 316  YVNEGLLLGQLLGNRFTVTLRGVVADSEDTIKGSADSLGRHGFINYFGLQRFGSGSVPTH 375

Query: 183  FIGAALLRGEWNAAVSMILDPREGERDII-------REAREYYKESCDIEGTLRRLPRYL 341
             IGAALLRGEW  AVSMILDPREG+  ++       R AREYYKES DI+GTLR+LPRYL
Sbjct: 376  LIGAALLRGEWKYAVSMILDPREGDILLLVICFMWMRMAREYYKESDDIDGTLRQLPRYL 435

Query: 342  VAERAVLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASNRVQKHGIGQVVLG 521
             AERAVLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS RVQK+G  QVV+G
Sbjct: 436  TAERAVLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGTDQVVVG 495

Query: 522  DLVYCKGGSAERVIEAVDIECEDASCNETCDFNHLDEISETAAPEKKDNPVK---AVDVE 692
            DLVYCKG   ER I + +  CED  C +    ++LDE S T   E+KD  VK   AV+ E
Sbjct: 496  DLVYCKGDDTEREIGSANSACEDDDCEDMYGCSNLDETSGTDLSERKDTLVKVEQAVNAE 555

Query: 693  DLLNGDYTIEDVILPLPGSRVMYPMNDIAEDYHDLAKKDGISLTDCVHSAKEFSITNMTG 872
            DL  G+YTI DVILP+PGSRV YP NDIA+ YHDLA+KD I+L + VHSAKEFSIT+MTG
Sbjct: 556  DLSTGNYTINDVILPMPGSRVSYPTNDIAKVYHDLAEKDAINLAESVHSAKEFSITSMTG 615

Query: 873  AYRRVFQKPIDFEWELIQYTDANVPLVETDLDIIAKSKSVTGEENDPNTLSVNCKTQAEN 1052
            +YRRVFQKP+DFEWE++ YTD   PL ETD++ +AK+KS+   + +  T   + K+ ++ 
Sbjct: 616  SYRRVFQKPMDFEWEILSYTDGTTPLAETDMEKLAKAKSIELNKEE-ETKKNDTKSPSDC 674

Query: 1053 IKNGTTPLTYGNE--------AEVDGEVGVPQISSICTTDAQSPQMALKLGFTLPASCYA 1208
            ++    P++ GN+         E + EV V ++  +   + +  Q ALKL FTLPASCYA
Sbjct: 675  MRQ---PMSSGNDLHLSAEYNREGEREVEVAKVEPLYGPNTRGAQTALKLTFTLPASCYA 731

Query: 1209 TMAIRELLKTSTSVTFHKTLN 1271
            TMAIRELLKTSTSV FHKTLN
Sbjct: 732  TMAIRELLKTSTSVAFHKTLN 752


>ref|XP_006347775.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Solanum
            tuberosum]
          Length = 685

 Score =  547 bits (1410), Expect = e-153
 Identities = 284/425 (66%), Positives = 328/425 (77%), Gaps = 2/425 (0%)
 Frame = +3

Query: 3    YVREGLLLGQLQGNRFTITLRGVVADSEDTIKAAADSLGKNGFINYFGLQRFGSGSVPTH 182
            +V+EGLLLGQL GNRFTITLRGV A+SED IKA+A +LGK+GFINYFGLQRFGS SVPTH
Sbjct: 263  HVKEGLLLGQLYGNRFTITLRGVSAESEDIIKASAVALGKHGFINYFGLQRFGSSSVPTH 322

Query: 183  FIGAALLRGEWNAAVSMILDPREGERDIIREAREYYKESCDIEGTLRRLPRYLVAERAVL 362
             IGAALLRGEW AAVS+ILDPREGE++ I   REYYKES DI+GTLR+LPRYLVAE+A+L
Sbjct: 323  LIGAALLRGEWKAAVSLILDPREGEKNAISTVREYYKESGDIDGTLRQLPRYLVAEKAIL 382

Query: 363  QCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASNRVQKHGIGQVVLGDLVYCKG 542
            QCLK+ PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS RVQKHG  QVVLGDLVY K 
Sbjct: 383  QCLKRSPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKHGFDQVVLGDLVYSK- 441

Query: 543  GSAERVIEAVDIECEDASCNETCDFNHLDEISETAAPEKKDNPVKAVDVEDLLNGDYTIE 722
                +V E+   ECED + N   D+++LDEISET  PE+++ PVK ++ EDL +G Y I+
Sbjct: 442  -EEYKVKESFVAECEDVNDNNMDDYSNLDEISETDLPEERNIPVKVINEEDLKSGTYAID 500

Query: 723  DVILPLPGSRVMYPMNDIAEDYHDLAKKDGISLTDCVHSAKEFSITNMTGAYRRVFQKPI 902
            DV+LPLPGSRV+YP NDI E Y DLA+KD ISLT+  H  KEFSITNMTGAYRRVFQKP 
Sbjct: 501  DVLLPLPGSRVIYPSNDIGEVYCDLAQKDDISLTETAHKIKEFSITNMTGAYRRVFQKPK 560

Query: 903  DFEWELIQYTDANVPLVETDLDIIAKSKSVTGEENDPNTLSVNCKTQAENIKNGTTPLTY 1082
            DFEWEL+ YTD  +PL ETD D+IA S      E DP   S      +  I  G   L+ 
Sbjct: 561  DFEWELLSYTDGTIPLAETDFDVIANSVKSKVREEDPTNGSKELPADSSAISVGGDMLS- 619

Query: 1083 GN--EAEVDGEVGVPQISSICTTDAQSPQMALKLGFTLPASCYATMAIRELLKTSTSVTF 1256
            G   E +++ E G+    S    +A+  QMALKL FTLPASCYATMA+RELLKTSTSV F
Sbjct: 620  GKVCEEKINNEAGMQSEKSQSGGNAEESQMALKLSFTLPASCYATMAVRELLKTSTSVAF 679

Query: 1257 HKTLN 1271
            HK+LN
Sbjct: 680  HKSLN 684


>ref|XP_007208186.1| hypothetical protein PRUPE_ppa020985mg [Prunus persica]
            gi|462403828|gb|EMJ09385.1| hypothetical protein
            PRUPE_ppa020985mg [Prunus persica]
          Length = 691

 Score =  543 bits (1400), Expect = e-152
 Identities = 284/429 (66%), Positives = 334/429 (77%), Gaps = 2/429 (0%)
 Frame = +3

Query: 3    YVREGLLLGQLQGNRFTITLRGVVADSEDTIKAAADSLGKNGFINYFGLQRFGSGSVPTH 182
            YV+EGL+LGQL GNRFTITLRGVVADSEDTIKA+  +LGK GFINYFGLQRFGSGSVPTH
Sbjct: 263  YVKEGLVLGQLLGNRFTITLRGVVADSEDTIKASVIALGKQGFINYFGLQRFGSGSVPTH 322

Query: 183  FIGAALLRGEWNAAVSMILDPREGE--RDIIREAREYYKESCDIEGTLRRLPRYLVAERA 356
             IGA LLRGEW + VS+ LDPREG+    ++  AREYYKE+ DIEGTLR+LPR+LV+E+A
Sbjct: 323  LIGATLLRGEWKSTVSLFLDPREGDILLMLLGIAREYYKETNDIEGTLRQLPRHLVSEKA 382

Query: 357  VLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASNRVQKHGIGQVVLGDLVYC 536
            +LQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS RVQK+G  +VVLGDLVYC
Sbjct: 383  ILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGTDRVVLGDLVYC 442

Query: 537  KGGSAERVIEAVDIECEDASCNETCDFNHLDEISETAAPEKKDNPVKAVDVEDLLNGDYT 716
            KG   E+V E V  +C D + N+T D   LD+IS T  PE++ N VKAV  ED+L+G+YT
Sbjct: 443  KGNETEKVSEVVSSKCVDENGNDTLDPIDLDDISGTNLPEERLNLVKAVTAEDILSGNYT 502

Query: 717  IEDVILPLPGSRVMYPMNDIAEDYHDLAKKDGISLTDCVHSAKEFSITNMTGAYRRVFQK 896
            I+DV+LP+PGSRV++P NDIA  +HDLAKKD ISLT+ VH+ KEFSIT+MTG+YRRVFQK
Sbjct: 503  IDDVVLPMPGSRVIFPENDIAHVFHDLAKKDAISLTESVHNVKEFSITSMTGSYRRVFQK 562

Query: 897  PIDFEWELIQYTDANVPLVETDLDIIAKSKSVTGEENDPNTLSVNCKTQAENIKNGTTPL 1076
            P+DFEWE+++Y D N PLV+TD D IAK+K      N+   L    K Q+E + N     
Sbjct: 563  PMDFEWEILKYIDGNKPLVDTDFDKIAKTK--PSSLNEDGRLHDKTK-QSECLDNDIGLQ 619

Query: 1077 TYGNEAEVDGEVGVPQISSICTTDAQSPQMALKLGFTLPASCYATMAIRELLKTSTSVTF 1256
            T  N A+  GE  +PQ  S+C T+ Q  Q ALKL FTLPASCYATMAIRELLKTSTSV  
Sbjct: 620  TDDNGAKAKGE-ELPQAESLCDTNPQETQTALKLSFTLPASCYATMAIRELLKTSTSVCA 678

Query: 1257 HKTLNH*SH 1283
                N  SH
Sbjct: 679  SFKSNPRSH 687


>ref|XP_004230110.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Solanum
            lycopersicum]
          Length = 685

 Score =  543 bits (1398), Expect = e-151
 Identities = 284/425 (66%), Positives = 328/425 (77%), Gaps = 2/425 (0%)
 Frame = +3

Query: 3    YVREGLLLGQLQGNRFTITLRGVVADSEDTIKAAADSLGKNGFINYFGLQRFGSGSVPTH 182
            +V+EGLLLGQL GNRFTITLRGV A+SED IKA+A +LGK+GFINYFGLQRFGS SVPTH
Sbjct: 263  HVKEGLLLGQLYGNRFTITLRGVSAESEDIIKASAVALGKHGFINYFGLQRFGSSSVPTH 322

Query: 183  FIGAALLRGEWNAAVSMILDPREGERDIIREAREYYKESCDIEGTLRRLPRYLVAERAVL 362
             IGAALLRGEW AAVS+ILDPREGE++ I   REYYKES DI+GTLR+LPRYLVAE+A+L
Sbjct: 323  LIGAALLRGEWKAAVSLILDPREGEKNTISTVREYYKESGDIDGTLRQLPRYLVAEKAIL 382

Query: 363  QCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASNRVQKHGIGQVVLGDLVYCKG 542
            Q LK+ PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS RVQKHG  QVVLGDLVY K 
Sbjct: 383  QSLKRSPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKHGFDQVVLGDLVYSK- 441

Query: 543  GSAERVIEAVDIECEDASCNETCDFNHLDEISETAAPEKKDNPVKAVDVEDLLNGDYTIE 722
                +V E+   ECED + N   D+++LDEISET  PE+++ PVK ++ EDL +G YTI+
Sbjct: 442  -EDYKVKESFVAECEDVNDNNMDDYSNLDEISETDLPEERNIPVKVINEEDLKSGTYTID 500

Query: 723  DVILPLPGSRVMYPMNDIAEDYHDLAKKDGISLTDCVHSAKEFSITNMTGAYRRVFQKPI 902
            DV+LPL GSRV+YP NDI E Y DLA+KDGISLT+  H  KEFSITNMTGAYRRVFQKP 
Sbjct: 501  DVLLPLSGSRVIYPSNDIGEVYRDLAQKDGISLTETAHKIKEFSITNMTGAYRRVFQKPK 560

Query: 903  DFEWELIQYTDANVPLVETDLDIIAKSKSVTGEENDPNTLSVNCKTQAENIKNGTTPLTY 1082
            DFEWEL+ YTD  +PL ETD D+IAKS      E  P+  S      +  I  G   L+ 
Sbjct: 561  DFEWELLSYTDGTIPLAETDFDVIAKSVKSKVIEEVPSNGSKELPADSSAISVGGDMLS- 619

Query: 1083 GN--EAEVDGEVGVPQISSICTTDAQSPQMALKLGFTLPASCYATMAIRELLKTSTSVTF 1256
            G   E  ++ E G+    S    +A+  QMALKL FTLPASCYATMA+RELLKTSTSV F
Sbjct: 620  GKVCEETINNEAGMQSEKSQSGGNAEESQMALKLSFTLPASCYATMAVRELLKTSTSVAF 679

Query: 1257 HKTLN 1271
            HK+LN
Sbjct: 680  HKSLN 684


>gb|EXB39195.1| Multisubstrate pseudouridine synthase 7 [Morus notabilis]
          Length = 784

 Score =  539 bits (1388), Expect = e-150
 Identities = 272/419 (64%), Positives = 330/419 (78%), Gaps = 3/419 (0%)
 Frame = +3

Query: 3    YVREGLLLGQLQGNRFTITLRGVVADSEDTIKAAADSLGKNGFINYFGLQRFGSGSVPTH 182
            YV+E L+LGQL GNRFT+TLRGVVADSE+TIKA+A +LG+ GFINYFGLQRFGSGSVPT+
Sbjct: 322  YVKEELVLGQLSGNRFTVTLRGVVADSEETIKASASALGRRGFINYFGLQRFGSGSVPTY 381

Query: 183  FIGAALLRGEWNAAVSMILDPREGE--RDIIREAREYYKESCDIEGTLRRLPRYLVAERA 356
             IGA L RGEW  AV MILDPREG+   D+I +AREYYKE+ DI+GTLR+LPR+LVAE A
Sbjct: 382  LIGAMLFRGEWKDAVHMILDPREGDILLDVITKAREYYKETNDIDGTLRQLPRHLVAENA 441

Query: 357  VLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASNRVQKHGIGQVVLGDLVYC 536
            +LQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS RVQK+G  QVV+GDLV+C
Sbjct: 442  ILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASTRVQKYGTDQVVVGDLVFC 501

Query: 537  KGGSAERVIEAVDIECEDASCNETCDFNHLDEISETAAPEKKDNPVKAVDVEDLLNGDYT 716
            K  + E+V      +C+D   N     + +DE+S    PE+++NPVK V  ED+L G++ 
Sbjct: 502  KEHNIEKVKGTASADCKDEDSNAIFGSHDIDEVSGAELPEERNNPVKVVAAEDILAGNFA 561

Query: 717  IEDVILPLPGSRVMYPMNDIAEDYHDLAKKDGISLTDCVHSAKEFSITNMTGAYRRVFQK 896
            I+DV+LPLPGSRV+ P NDIA+ YHDLAKKD ISLT+  H+ KEFSIT+MTG+YRRVFQK
Sbjct: 562  IDDVVLPLPGSRVILPTNDIAQVYHDLAKKDAISLTESAHNVKEFSITSMTGSYRRVFQK 621

Query: 897  PIDFEWELIQYTDANVPLVETDLDIIAKSKSV-TGEENDPNTLSVNCKTQAENIKNGTTP 1073
            P+D+EWEL+ YT+  +PL ETDLDIIAKSK     EEN+ N    + K +++ ++N    
Sbjct: 622  PVDYEWELLTYTNGTIPLAETDLDIIAKSKPAHVAEENEVNGNEESTK-RSKRVENEAVL 680

Query: 1074 LTYGNEAEVDGEVGVPQISSICTTDAQSPQMALKLGFTLPASCYATMAIRELLKTSTSV 1250
             T  N+ + + E  + Q  S C T++Q PQMALKL FTLPASCYATMAIRELLKTSTSV
Sbjct: 681  QTDDNKVDGEREAEL-QAESTCGTNSQEPQMALKLSFTLPASCYATMAIRELLKTSTSV 738


>ref|XP_007030611.1| Pseudouridine synthase family protein, putative isoform 1 [Theobroma
            cacao] gi|508719216|gb|EOY11113.1| Pseudouridine synthase
            family protein, putative isoform 1 [Theobroma cacao]
          Length = 763

 Score =  534 bits (1376), Expect = e-149
 Identities = 281/447 (62%), Positives = 337/447 (75%), Gaps = 24/447 (5%)
 Frame = +3

Query: 3    YVREGLLLGQLQGNRFTITLRGVVADSEDTIKAAADSLGKNGFINYFGLQRFGSGSVPTH 182
            YV++  LLGQL GNRFTI LRG+VADSE+TIKA+ +SLG++GFINYFGLQRFGSGS+PTH
Sbjct: 317  YVKDDFLLGQLLGNRFTIILRGIVADSEETIKASVESLGRHGFINYFGLQRFGSGSIPTH 376

Query: 183  FIGAALLRGEWNAAVSMILDPREGE-------------RDIIR-----EAREYYKESCDI 308
             IGA LLRGEW AA S ILDPREG+             + + R      AREYYKE+ DI
Sbjct: 377  RIGATLLRGEWQAAASTILDPREGDILSLTFFFPFLLGKALFRCLTTQRAREYYKETGDI 436

Query: 309  EGTLRRLPRYLVAERAVLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASNRV 488
            EGTLR+LPR+LVAERA+LQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS RV
Sbjct: 437  EGTLRQLPRHLVAERAMLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRV 496

Query: 489  QKHGIGQVVLGDLVYCKGGSAERVIEAVDIECEDASCNETCDFNHLDEISETAAPEKKDN 668
            +K+G  +VVLGDLVYCKG  AE+V + V  E ED +  +  D + LDEIS T  PE K+N
Sbjct: 497  EKYGSNEVVLGDLVYCKGNDAEKV-KVVPSEHEDNNFEDAYDCSQLDEISGTDLPEGKNN 555

Query: 669  PVKAVDVEDLLNGDYTIEDVILPLPGSRVMYPMNDIAEDYHDLAKKDGISLTDCVHSAKE 848
             VKA+   D+  G+YTIEDV+LP+PGSR++YP+NDIA  YHD+AKKDGISLT+ VH+ KE
Sbjct: 556  LVKAITAADISTGNYTIEDVVLPMPGSRIIYPVNDIANVYHDMAKKDGISLTESVHNIKE 615

Query: 849  FSITNMTGAYRRVFQKPIDFEWELIQYTDANVPLVETDLDIIAKSKSVTGEENDPNTLSV 1028
            FSIT+MTG+YRRVFQKPIDFEWEL+ YTD ++ L ETDLD IAK+K V   + +  T   
Sbjct: 616  FSITSMTGSYRRVFQKPIDFEWELLSYTDGSIALSETDLDKIAKTKPVNLVKEEKPTDGT 675

Query: 1029 NCKTQAENIKN-----GTTPLTYGN-EAEVDGEVGVPQISSICTTDAQSPQMALKLGFTL 1190
              +  ++++++          + GN E E   E   PQI S+  +++   Q ALKL FTL
Sbjct: 676  EGQDSSDHMEHIESFEDDKKFSTGNVEVEGSREAEPPQIHSLPESNSLGTQKALKLAFTL 735

Query: 1191 PASCYATMAIRELLKTSTSVTFHKTLN 1271
            PASCYATMAIRELLKTSTSV FHKTLN
Sbjct: 736  PASCYATMAIRELLKTSTSVAFHKTLN 762


>gb|EYU22643.1| hypothetical protein MIMGU_mgv1a002284mg [Mimulus guttatus]
          Length = 691

 Score =  533 bits (1374), Expect = e-149
 Identities = 271/427 (63%), Positives = 325/427 (76%), Gaps = 4/427 (0%)
 Frame = +3

Query: 3    YVREGLLLGQLQGNRFTITLRGVVADSEDTIKAAADSLGKNGFINYFGLQRFGSGSVPTH 182
            YV E L+LG+LQGNRFTITLR V +D ED I+A+A +LG NGFINYFGLQRFGS S+PTH
Sbjct: 265  YVDEELVLGKLQGNRFTITLRSVSSDVEDIIRASATALGNNGFINYFGLQRFGSSSIPTH 324

Query: 183  FIGAALLRGEWNAAVSMILDPREGERDIIREAREYYKESCDIEGTLRRLPRYLVAERAVL 362
             IGAALLRGEW AAVSMILDPREGE+D+ R  REYYKES DIEGTLR+LPR+LVAER++L
Sbjct: 325  LIGAALLRGEWKAAVSMILDPREGEKDVTRTIREYYKESGDIEGTLRQLPRHLVAERSIL 384

Query: 363  QCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASNRVQKHGIGQVVLGDLVYCKG 542
             C +K PGNYLQAL AIPRTLRMM+VHSYQSYLWNHAAS RVQK+G+ QVVLGDLVYCK 
Sbjct: 385  YCFQKNPGNYLQALLAIPRTLRMMFVHSYQSYLWNHAASMRVQKYGMHQVVLGDLVYCKD 444

Query: 543  GSAERVIEAVDIECEDASCNETCDFNHLDEISETAAPEKKDNPVKAVDVEDLLNGDYTIE 722
               E+  +  + ECED + N+T D  H+DE+S     E ++  VK +  ED+  G YTI+
Sbjct: 445  QEIEKETKFSNSECEDGNGNDTHDDCHVDELSVIDLSEARNTVVKVISEEDIAAGTYTID 504

Query: 723  DVILPLPGSRVMYPMNDIAEDYHDLAKKDGISLTDCVHSAKEFSITNMTGAYRRVFQKPI 902
            D++LPLPGSR+ YP+NDI + YHD+A+KD ISLTD  H++KEFS T++TGAYRRVFQKP 
Sbjct: 505  DIVLPLPGSRITYPLNDIGKIYHDIARKDNISLTDGAHNSKEFSFTSITGAYRRVFQKPK 564

Query: 903  DFEWELIQYTDANVPLVETDLDIIAKSKSVT--GEENDPNTLSV--NCKTQAENIKNGTT 1070
            DFEWEL++YTDAN+PL ETDLDIIAKS + T  G+ ND   + +   C +  EN+ +   
Sbjct: 565  DFEWELLKYTDANIPLAETDLDIIAKSGTSTCVGDSNDKEQIKLQNGCSSTPENLDDKIE 624

Query: 1071 PLTYGNEAEVDGEVGVPQISSICTTDAQSPQMALKLGFTLPASCYATMAIRELLKTSTSV 1250
              T   E E   E  +    S+    A   QMALKL FTLP+SCYATMAIRELLKTSTSV
Sbjct: 625  RSTGSEETERVREEDIHIEESLGAPKALESQMALKLSFTLPSSCYATMAIRELLKTSTSV 684

Query: 1251 TFHKTLN 1271
             FHK +N
Sbjct: 685  AFHKAMN 691


>ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana]
            gi|52354299|gb|AAU44470.1| hypothetical protein AT3G04820
            [Arabidopsis thaliana] gi|61742699|gb|AAX55170.1|
            hypothetical protein At3g04820 [Arabidopsis thaliana]
            gi|332640619|gb|AEE74140.1| pseudouridine synthase
            [Arabidopsis thaliana]
          Length = 715

 Score =  525 bits (1351), Expect = e-146
 Identities = 272/425 (64%), Positives = 325/425 (76%), Gaps = 3/425 (0%)
 Frame = +3

Query: 6    VREGLLLGQLQGNRFTITLRGVVADSEDTIKAAADSLGKNGFINYFGLQRFGSGSVPTHF 185
            V+EGLLLGQL GNRFTITLRGVVADSE+TIK +A+SLGK+GFINYFGLQRFGSGSVPTH 
Sbjct: 302  VKEGLLLGQLMGNRFTITLRGVVADSEETIKQSAESLGKDGFINYFGLQRFGSGSVPTHH 361

Query: 186  IGAALLRGEWNAAVSMILDPREGERDIIREAREYYKESCDIEGTLRRLPRYLVAERAVLQ 365
            +GAALL+GEW  AV MILDPRE ER ++ +AREYYKE+ DI+GTLR+LPRYLVAERA+LQ
Sbjct: 362  VGAALLKGEWKDAVDMILDPRETERHVVNDAREYYKETGDIDGTLRQLPRYLVAERAILQ 421

Query: 366  CLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASNRVQKHGIGQVVLGDLVYCKGG 545
            CLKKCPGNYLQALK IPRTLRMMYVHSYQSYLWN+AAS RV+ +G  QVVLGDLV  K  
Sbjct: 422  CLKKCPGNYLQALKGIPRTLRMMYVHSYQSYLWNNAASLRVKNYGTSQVVLGDLVSTKVD 481

Query: 546  SAERVIEAVDIECEDASCNETCDFNHLDEISETAAPEKKDNPVKAVDVEDLLNGDYTIED 725
            +A+R+++++  E  ++S  E  D + +D+ +    P ++ + VK V +EDL  G Y+  D
Sbjct: 482  AAKRMVDSLTSEHNESS-EEALDCDQVDDTAVVDLPAERSDLVKVVSIEDLEAGTYSTSD 540

Query: 726  VILPLPGSRVMYPMNDIAEDYHDLAKKDGISLTDCVHSAKEFSITNMTGAYRRVFQKPID 905
            ++LPLPGSRV+YP NDIAE YHDLAKKDGISLT+ +H  KEFSIT+MTG YRRVFQKPID
Sbjct: 541  IVLPLPGSRVIYPSNDIAEIYHDLAKKDGISLTESIHGVKEFSITSMTGGYRRVFQKPID 600

Query: 906  FEWELIQYTDANVPLVETDLDIIAKSKSVTGEENDPNTLSVNCKTQAENIKNGTTPL--- 1076
            FEWEL+ YTD+N PL ETDLD I  +K V    +       + K+      +G T L   
Sbjct: 601  FEWELLTYTDSNKPLAETDLDRIPMNKPVEKVGSTEEIEDESMKSDTNPHDSGETNLKDQ 660

Query: 1077 TYGNEAEVDGEVGVPQISSICTTDAQSPQMALKLGFTLPASCYATMAIRELLKTSTSVTF 1256
            T  NEAE D   G P        D++  QMALK+  TLP+SCYATMAIRELLKTSTSV +
Sbjct: 661  TDSNEAEKD--TGNP--------DSEQTQMALKMALTLPSSCYATMAIRELLKTSTSVAY 710

Query: 1257 HKTLN 1271
            HKTLN
Sbjct: 711  HKTLN 715


>ref|XP_006577278.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Glycine max]
          Length = 690

 Score =  518 bits (1333), Expect = e-144
 Identities = 271/429 (63%), Positives = 328/429 (76%), Gaps = 6/429 (1%)
 Frame = +3

Query: 3    YVREGLLLGQLQGNRFTITLRGVVADSEDTIKAAADSLGKNGFINYFGLQRFGSGSVPTH 182
            YV+EGL LGQL GNRFTITLRG+VADSED IKA+AD+LG++GFINYFGLQRFGSGS+PTH
Sbjct: 267  YVKEGLCLGQLLGNRFTITLRGIVADSEDIIKASADALGRHGFINYFGLQRFGSGSLPTH 326

Query: 183  FIGAALLRGEWNAAVSMILDPREGERDIIREAREYYKESCDIEGTLRRLPRYLVAERAVL 362
             IGAALL+GEW  AV MILDPR+GE+  I +AR+YYKES D+ GTL++LPRYLVAERAVL
Sbjct: 327  LIGAALLQGEWKLAVDMILDPRDGEKSAIAKARKYYKESSDVVGTLKQLPRYLVAERAVL 386

Query: 363  QCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASNRVQKHGIGQVVLGDLVYCKG 542
            Q LK  PGNYLQALK+IPRTLRM+YVHSYQSYLWNHAAS RVQK+G   VVLGDLVYCK 
Sbjct: 387  QTLKTSPGNYLQALKSIPRTLRMLYVHSYQSYLWNHAASKRVQKYGTENVVLGDLVYCKE 446

Query: 543  GSAERVIEAVDIECEDASCNETCDFNHLDEISETAAPEKKDNPVKAVDVEDLLNGDYTIE 722
             S  +V E+V  E  +  C+   D N+ DEIS      ++ + VK VDVEDL +G YTI+
Sbjct: 447  NSTGKVTESVGSEYAE-DCSGRYDSNNEDEIS--GEIHEEIDSVKVVDVEDLNSGYYTID 503

Query: 723  DVILPLPGSRVMYPMNDIAEDYHDLAKKDGISLTDCVHSAKEFSITNMTGAYRRVFQKPI 902
            DVILP+PGSR+ YP N IA  Y DLAKKDGISLT+ VH+ ++FSIT++TG YRRVFQKPI
Sbjct: 504  DVILPMPGSRIKYPTNHIANVYEDLAKKDGISLTESVHNVEDFSITSITGCYRRVFQKPI 563

Query: 903  DFEWELIQYTDANVPLVETDLDIIAKSKSV-----TGEENDPNTLSVNCKTQAENIKNGT 1067
            +FEWEL+ Y+D+N  LVETDLD + KSK +      G  N  N  + +C      +++  
Sbjct: 564  NFEWELLTYSDSNKQLVETDLDKVNKSKPMGTVKQMGAANGKNEEAFDC---IRELESSN 620

Query: 1068 TPLTYGNEAEVDG-EVGVPQISSICTTDAQSPQMALKLGFTLPASCYATMAIRELLKTST 1244
              +   N +E+ G E+ +P   S+  + +Q  Q+ALKL FTLPASCYATMAIRELLKTST
Sbjct: 621  DVVKVENYSEIAGEEIKLPHDESLSGSSSQDSQIALKLSFTLPASCYATMAIRELLKTST 680

Query: 1245 SVTFHKTLN 1271
            SV +HKTLN
Sbjct: 681  SVAYHKTLN 689


>ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C1A4.09-like [Cucumis
            sativus]
          Length = 719

 Score =  518 bits (1333), Expect = e-144
 Identities = 275/441 (62%), Positives = 331/441 (75%), Gaps = 18/441 (4%)
 Frame = +3

Query: 3    YVREGLLLGQLQGNRFTITLRGVVADSEDTIKAAADSLGKNGFINYFGLQRFGSGSVPTH 182
            Y++EGLLLGQL GNRFTITLRGVVA+SED IKA+A++LG++GFINYFGLQRFGSGSVPTH
Sbjct: 302  YIQEGLLLGQLLGNRFTITLRGVVANSEDVIKASAEALGRHGFINYFGLQRFGSGSVPTH 361

Query: 183  FIGAALLRGEWNAAVSMILDPREGERDIIREAREYYKESCDIEGTLRRLPRYLVAERAVL 362
             +GA+LLRGEW  AV+MILDPREG+  ++  AR+YYKES DI+GTL++LPRYLVAERA+L
Sbjct: 362  LVGASLLRGEWKGAVNMILDPREGDILLLMRARDYYKESDDIDGTLKQLPRYLVAERAIL 421

Query: 363  QCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASNRVQKHGIGQVVLGDLVYCKG 542
            QCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS RVQK+GI +VV+GDLVYCK 
Sbjct: 422  QCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGIDKVVVGDLVYCKE 481

Query: 543  GSAERVI-----EAVDIECEDASCNETCDFNHLDEISETAAPEKKDNPVKAVDVEDLLNG 707
               E        E  D +C DA+  ++C   HL+E+ +   P ++   VKAV   D+L+G
Sbjct: 482  NHTETAAVQNSEEYEDEDCGDANSYDSC---HLEEVCKLGLPTERHKLVKAVTAGDVLSG 538

Query: 708  DYTIEDVILPLPGSRVMYPMNDIAEDYHDLAKKDGISLTDCVHSAKEFSITNMTGAYRRV 887
            ++TI+DV+LPLPGSRV+YP NDIAE Y+DLA KD ISLT+ VH+ KEFSIT+MTG+YRRV
Sbjct: 539  NFTIDDVVLPLPGSRVLYPTNDIAEVYNDLATKDSISLTNSVHNVKEFSITSMTGSYRRV 598

Query: 888  FQKPIDFEWELIQYTDANVPLVETDLDIIAKSKSV--TGEEN-----------DPNTLSV 1028
            FQ+P D+EWELI Y D N+PL ++DL  + KS+SV  + EE            D    SV
Sbjct: 599  FQRPKDYEWELISYVDRNLPLAQSDLHNLLKSQSVEISKEEKIADKSKNEDSLDSTDQSV 658

Query: 1029 NCKTQAENIKNGTTPLTYGNEAEVDGEVGVPQISSICTTDAQSPQMALKLGFTLPASCYA 1208
             CK   +NI+     L  G +   +G+              Q PQMALKL FTLPAS YA
Sbjct: 659  CCK---KNIQ-----LEAGGKENENGQ------------GTQDPQMALKLSFTLPASSYA 698

Query: 1209 TMAIRELLKTSTSVTFHKTLN 1271
            TMAIRELLKTSTSV FHKTLN
Sbjct: 699  TMAIRELLKTSTSVAFHKTLN 719


>ref|XP_004494684.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
            [Cicer arietinum]
          Length = 698

 Score =  516 bits (1329), Expect = e-143
 Identities = 271/428 (63%), Positives = 325/428 (75%), Gaps = 5/428 (1%)
 Frame = +3

Query: 3    YVREGLLLGQLQGNRFTITLRGVVADSEDTIKAAADSLGKNGFINYFGLQRFGSGSVPTH 182
            YV EGL LGQL GNRFTITLRG+VADS DTIKAAADSLG++GFINYFGLQRFGSGSVPTH
Sbjct: 273  YVNEGLCLGQLLGNRFTITLRGIVADSVDTIKAAADSLGRHGFINYFGLQRFGSGSVPTH 332

Query: 183  FIGAALLRGEWNAAVSMILDPREGERDIIREAREYYKESCDIEGTLRRLPRYLVAERAVL 362
             IGAAL RGEW  AV +ILDPR+GER +I +AR+YYK++ D+ GTL++LP++LVAERAVL
Sbjct: 333  RIGAALFRGEWKLAVDLILDPRDGERYVIAKARKYYKDTNDVAGTLKQLPQFLVAERAVL 392

Query: 363  QCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASNRVQKHGIGQVVLGDLVYCKG 542
            + LK+ PGNYLQALK+IPRTLRMMYVHSYQSYLWNHAAS RVQK+G  QVVLGDLVYCK 
Sbjct: 393  KSLKQFPGNYLQALKSIPRTLRMMYVHSYQSYLWNHAASTRVQKYGTEQVVLGDLVYCKE 452

Query: 543  GSAERVIEAVDIECEDASCNETCDFNHLDEISETAAPEKKDNPVKAVDVEDLLNGDYTIE 722
                +  E V  EC+D  C +  D N  DEI E    +K ++ VKAV+ EDL +  YTI+
Sbjct: 453  NPPSKATEIVGSECDD-DCGDIYDSNIEDEIPED-IHDKSNSSVKAVNAEDLNSKSYTID 510

Query: 723  DVILPLPGSRVMYPMNDIAEDYHDLAKKDGISLTDCVHSAKEFSITNMTGAYRRVFQKPI 902
            DVILP+PGSR +YP NDI + Y+DL  KDGISLT+ VH+AKEFS+T++TG+YRRVFQKPI
Sbjct: 511  DVILPMPGSRSIYPANDIVKVYNDLTNKDGISLTENVHNAKEFSMTSVTGSYRRVFQKPI 570

Query: 903  DFEWELIQYTDANVPLVETDLDIIAKSK-----SVTGEENDPNTLSVNCKTQAENIKNGT 1067
            +FEWEL+ YTD+N PLVETDLD I KSK     +V        T + +C  Q E+  +G 
Sbjct: 571  NFEWELLTYTDSNKPLVETDLDKIGKSKRTNVHAVGASNGQKETTAFDCIRQVESSDDGV 630

Query: 1068 TPLTYGNEAEVDGEVGVPQISSICTTDAQSPQMALKLGFTLPASCYATMAIRELLKTSTS 1247
               T  +E     EV +P   S+  + ++    ALKL FTLP+SCYATMAIRELLKTSTS
Sbjct: 631  KVETDYDE-NASKEVILPHDESVPDSSSKDSHTALKLTFTLPSSCYATMAIRELLKTSTS 689

Query: 1248 VTFHKTLN 1271
            V + KTLN
Sbjct: 690  VAYQKTLN 697


>ref|XP_006604840.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X2
            [Glycine max]
          Length = 676

 Score =  514 bits (1324), Expect = e-143
 Identities = 272/429 (63%), Positives = 325/429 (75%), Gaps = 6/429 (1%)
 Frame = +3

Query: 3    YVREGLLLGQLQGNRFTITLRGVVADSEDTIKAAADSLGKNGFINYFGLQRFGSGSVPTH 182
            YV+EGL LGQL GNRFTITLRG+VADSED IKA+AD+LG++GFINYFGLQRFGSGS+PTH
Sbjct: 253  YVKEGLCLGQLLGNRFTITLRGIVADSEDIIKASADALGRHGFINYFGLQRFGSGSLPTH 312

Query: 183  FIGAALLRGEWNAAVSMILDPREGERDIIREAREYYKESCDIEGTLRRLPRYLVAERAVL 362
             IGAALLRGEW  AV MILDPR+GE+  I +AR+YYKES D+ GTL++LPRYLVAERAVL
Sbjct: 313  LIGAALLRGEWKLAVDMILDPRDGEKSAIAKARKYYKESSDVVGTLKQLPRYLVAERAVL 372

Query: 363  QCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASNRVQKHGIGQVVLGDLVYCKG 542
            Q LK  PGNYLQALK+IPRTLRM+YVHSYQSYLWNHAAS RVQK+G   VVLGDLVYCK 
Sbjct: 373  QTLKTSPGNYLQALKSIPRTLRMLYVHSYQSYLWNHAASKRVQKYGTENVVLGDLVYCKE 432

Query: 543  GSAERVIEAVDIECEDASCNETCDFNHLDEISETAAPEKKDNPVKAVDVEDLLNGDYTIE 722
             S  +V E V  E  +  C    D N+ DE+S      ++ N VK +D EDL +G YTI+
Sbjct: 433  NSTGKVTEFVGSEYAE-DCRGRYDSNNEDEVS--GEIHEEINSVKVIDAEDLNSGCYTID 489

Query: 723  DVILPLPGSRVMYPMNDIAEDYHDLAKKDGISLTDCVHSAKEFSITNMTGAYRRVFQKPI 902
            DVILP+PGSRV YP N IA  Y DLAKKDGISLT+ VH+ ++FSIT++TG YRRVFQKPI
Sbjct: 490  DVILPMPGSRVKYPTNHIANVYEDLAKKDGISLTESVHNVEDFSITSITGCYRRVFQKPI 549

Query: 903  DFEWELIQYTDANVPLVETDLDIIAKSKSVT-----GEENDPNTLSVNCKTQAENIKNGT 1067
            +FEWEL+ Y+D++  LV+TDLD I KSK +      G  N  N  + +C  + E+  +  
Sbjct: 550  NFEWELLSYSDSSEQLVDTDLDKINKSKPMNTVKQMGAANGKNEEAFDCIRELESSDDIA 609

Query: 1068 TPLTYGNEAEVDG-EVGVPQISSICTTDAQSPQMALKLGFTLPASCYATMAIRELLKTST 1244
                Y   +E+ G EV +P   S+  + +Q  Q+ALKL FTLPASCYATMAIRELLKTST
Sbjct: 610  KVENY---SEILGEEVKLPHDESLIGSSSQDSQIALKLSFTLPASCYATMAIRELLKTST 666

Query: 1245 SVTFHKTLN 1271
            SV +HKTLN
Sbjct: 667  SVAYHKTLN 675