BLASTX nr result
ID: Akebia22_contig00010624
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia22_contig00010624 (753 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK26380.1| unknown [Picea sitchensis] 247 4e-63 dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s... 234 2e-59 gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi... 234 2e-59 ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, ... 233 4e-59 ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, ... 232 9e-59 ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, I... 229 1e-57 ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, ... 228 1e-57 ref|NP_001051880.1| Os03g0845700 [Oryza sativa Japonica Group] g... 223 6e-56 ref|XP_003580476.1| PREDICTED: DNA-directed RNA polymerases I, I... 223 6e-56 ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [S... 223 6e-56 gb|EEC76521.1| hypothetical protein OsI_14307 [Oryza sativa Indi... 223 6e-56 ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citr... 222 1e-55 ref|NP_001147399.1| LOC100281008 [Zea mays] gi|194699730|gb|ACF8... 221 2e-55 ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III ... 221 2e-55 gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subun... 221 3e-55 ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [S... 221 3e-55 gb|ACG27451.1| DNA-directed RNA polymerases I, II, and III 17.1 ... 220 4e-55 ref|XP_003563485.1| PREDICTED: DNA-directed RNA polymerases I, I... 219 1e-54 ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, I... 218 1e-54 ref|NP_191519.1| RNA polymerase Rpb8 [Arabidopsis thaliana] gi|2... 216 5e-54 >gb|ABK26380.1| unknown [Picea sitchensis] Length = 145 Score = 247 bits (630), Expect = 4e-63 Identities = 119/145 (82%), Positives = 134/145 (92%) Frame = +3 Query: 63 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 242 MVELLFEDIFT+TR+DPDGKKFDKVSRIEARSEQFDMYM LDVN ++YP+++GEKF + L Sbjct: 1 MVELLFEDIFTVTRIDPDGKKFDKVSRIEARSEQFDMYMLLDVNIDVYPVSVGEKFAVAL 60 Query: 243 APTLSLDGTPDTGYFMPGARKSLADKFEYVMHGKLYRISEEGSGINVKVEMYASFGGLLM 422 APTL+LDGTPD GYF+ G RKSLADK+EYVM+GKLY +SEEGSG NVKVE+ ASFGGLLM Sbjct: 61 APTLNLDGTPDNGYFIQGGRKSLADKYEYVMYGKLYNLSEEGSGANVKVEINASFGGLLM 120 Query: 423 LLKGDPSNAAHFELDQRLFLLMRKV 497 LLKGDPSNA +FELDQRLFLLMRKV Sbjct: 121 LLKGDPSNAGNFELDQRLFLLMRKV 145 >dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza sativa Japonica Group] Length = 396 Score = 234 bits (597), Expect = 2e-59 Identities = 115/147 (78%), Positives = 133/147 (90%), Gaps = 1/147 (0%) Frame = +3 Query: 60 RMVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMV 239 +MVE LFEDIFT+TRLDPDGKKFD+VSRIEARSEQFDMYMQLDV TE+YP+ G++FTMV Sbjct: 250 KMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMV 309 Query: 240 LAPTLSLDGTPDTGYFMPGARKSLADKFEYVMHGKLYRISEE-GSGINVKVEMYASFGGL 416 LAPTL+LDGTPDTG++ RK+LADKF+YVMHGKLY+ISE+ SG KVE+YASFGGL Sbjct: 310 LAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGL 369 Query: 417 LMLLKGDPSNAAHFELDQRLFLLMRKV 497 LM+LKGDPS+AA FELDQRLFLL+RKV Sbjct: 370 LMMLKGDPSSAASFELDQRLFLLIRKV 396 >gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group] gi|125598367|gb|EAZ38147.1| hypothetical protein OsJ_22498 [Oryza sativa Japonica Group] Length = 191 Score = 234 bits (597), Expect = 2e-59 Identities = 115/147 (78%), Positives = 133/147 (90%), Gaps = 1/147 (0%) Frame = +3 Query: 60 RMVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMV 239 +MVE LFEDIFT+TRLDPDGKKFD+VSRIEARSEQFDMYMQLDV TE+YP+ G++FTMV Sbjct: 45 KMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMV 104 Query: 240 LAPTLSLDGTPDTGYFMPGARKSLADKFEYVMHGKLYRISEE-GSGINVKVEMYASFGGL 416 LAPTL+LDGTPDTG++ RK+LADKF+YVMHGKLY+ISE+ SG KVE+YASFGGL Sbjct: 105 LAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGL 164 Query: 417 LMLLKGDPSNAAHFELDQRLFLLMRKV 497 LM+LKGDPS+AA FELDQRLFLL+RKV Sbjct: 165 LMMLKGDPSSAASFELDQRLFLLIRKV 191 >ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 8B-like isoform X1 [Oryza brachyantha] gi|573948243|ref|XP_006656428.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 8B-like isoform X2 [Oryza brachyantha] gi|573948245|ref|XP_006656429.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 8B-like isoform X3 [Oryza brachyantha] gi|573948247|ref|XP_006656430.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 8B-like isoform X4 [Oryza brachyantha] gi|573948249|ref|XP_006656431.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 8B-like isoform X5 [Oryza brachyantha] Length = 146 Score = 233 bits (595), Expect = 4e-59 Identities = 115/146 (78%), Positives = 132/146 (90%), Gaps = 1/146 (0%) Frame = +3 Query: 63 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 242 MVE LFEDIFT+TRLDPDGKKFD+VSRIEARSEQFDMYMQLDV TE+YP+ G+KFTMVL Sbjct: 1 MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRPGDKFTMVL 60 Query: 243 APTLSLDGTPDTGYFMPGARKSLADKFEYVMHGKLYRISEEGSGIN-VKVEMYASFGGLL 419 APTL+LDGTPD G++ RK+LADK++YVMHGKLY+ISE+GSG KVE+YASFGGLL Sbjct: 61 APTLNLDGTPDIGFYTQAGRKTLADKYDYVMHGKLYKISEDGSGGQATKVEIYASFGGLL 120 Query: 420 MLLKGDPSNAAHFELDQRLFLLMRKV 497 M+LKGDPS AA+FELDQRLFLL+RKV Sbjct: 121 MMLKGDPSTAANFELDQRLFLLIRKV 146 >ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 8B-like [Oryza brachyantha] Length = 147 Score = 232 bits (592), Expect = 9e-59 Identities = 114/147 (77%), Positives = 132/147 (89%), Gaps = 2/147 (1%) Frame = +3 Query: 63 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 242 M E LFEDIFT+TRLDPDGKKFD+VSRIEAR+EQ ++YMQLDV T++YP++ G+KFTMVL Sbjct: 1 MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARNEQLNVYMQLDVATDVYPMHPGDKFTMVL 60 Query: 243 APTLSLDGTPDTGYFMPGARKSLADKFEYVMHGKLYRISE--EGSGINVKVEMYASFGGL 416 PTL+LDGTPDTG+F RK+LADK+EYVMHGKLY+ISE E SG N KVEMYASFGGL Sbjct: 61 VPTLNLDGTPDTGFFTQAGRKTLADKYEYVMHGKLYKISEDKETSGQNAKVEMYASFGGL 120 Query: 417 LMLLKGDPSNAAHFELDQRLFLLMRKV 497 LM+LKGDPS+AA+FELDQRLFLLMRKV Sbjct: 121 LMMLKGDPSSAANFELDQRLFLLMRKV 147 >ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit rpabc3-like isoform 1 [Solanum lycopersicum] gi|460377396|ref|XP_004234479.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit rpabc3-like isoform 2 [Solanum lycopersicum] Length = 145 Score = 229 bits (583), Expect = 1e-57 Identities = 111/145 (76%), Positives = 130/145 (89%) Frame = +3 Query: 63 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 242 MVE LFEDIFT+T+ DPDGKKFD+V+RIEARSEQFDM+M LDVNTEIYP+ + +KF MVL Sbjct: 1 MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDVNTEIYPMRVKDKFMMVL 60 Query: 243 APTLSLDGTPDTGYFMPGARKSLADKFEYVMHGKLYRISEEGSGINVKVEMYASFGGLLM 422 A TL+LDGTPDTGYF+ G +KSLADKFEYVMHGKLYRISEEGSG +VK +++ SFGGLLM Sbjct: 61 ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120 Query: 423 LLKGDPSNAAHFELDQRLFLLMRKV 497 L+GDPS AA FELDQ++FLL+RKV Sbjct: 121 QLRGDPSIAAKFELDQKIFLLIRKV 145 >ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 8B-like [Solanum tuberosum] Length = 145 Score = 228 bits (582), Expect = 1e-57 Identities = 110/145 (75%), Positives = 130/145 (89%) Frame = +3 Query: 63 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 242 MVE LFEDIFT+T+ DPDGKKFD+V+RIEARSEQFDM+M LD+NTEIYP+ + +KF MVL Sbjct: 1 MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDINTEIYPMRVKDKFMMVL 60 Query: 243 APTLSLDGTPDTGYFMPGARKSLADKFEYVMHGKLYRISEEGSGINVKVEMYASFGGLLM 422 A TL+LDGTPDTGYF+ G +KSLADKFEYVMHGKLYRISEEGSG +VK +++ SFGGLLM Sbjct: 61 ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120 Query: 423 LLKGDPSNAAHFELDQRLFLLMRKV 497 L+GDPS AA FELDQ++FLL+RKV Sbjct: 121 QLRGDPSIAAKFELDQKIFLLIRKV 145 >ref|NP_001051880.1| Os03g0845700 [Oryza sativa Japonica Group] gi|29244685|gb|AAO73277.1| putative RNA polymerase [Oryza sativa Japonica Group] gi|41469638|gb|AAS07361.1| putative RNA polymerase [Oryza sativa Japonica Group] gi|108712076|gb|ABF99871.1| RNA polymerase Rpb8 family protein, expressed [Oryza sativa Japonica Group] gi|108712077|gb|ABF99872.1| RNA polymerase Rpb8 family protein, expressed [Oryza sativa Japonica Group] gi|113550351|dbj|BAF13794.1| Os03g0845700 [Oryza sativa Japonica Group] gi|125588624|gb|EAZ29288.1| hypothetical protein OsJ_13351 [Oryza sativa Japonica Group] gi|215692970|dbj|BAG88390.1| unnamed protein product [Oryza sativa Japonica Group] Length = 148 Score = 223 bits (568), Expect = 6e-56 Identities = 109/148 (73%), Positives = 130/148 (87%), Gaps = 3/148 (2%) Frame = +3 Query: 63 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 242 M E LFEDIFT+TRLDPDGKKFD+VSRIEARS+QFDMYMQLDV T++YP++ G++FTMVL Sbjct: 1 MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMVL 60 Query: 243 APTLSLDGTPDTGYFMPGARKSLADKFEYVMHGKLYRISEEGSGIN---VKVEMYASFGG 413 PTL+LDGTPD+ +F RK+LADK+EYVMHGKLY+ISE+ + KVEMYASFGG Sbjct: 61 VPTLNLDGTPDSAFFTQAGRKTLADKYEYVMHGKLYKISEDKDTSDQNAKKVEMYASFGG 120 Query: 414 LLMLLKGDPSNAAHFELDQRLFLLMRKV 497 LL++LKGDPS+AA+FELDQRLFLLMRKV Sbjct: 121 LLVMLKGDPSSAANFELDQRLFLLMRKV 148 >ref|XP_003580476.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit rpabc3-like [Brachypodium distachyon] Length = 146 Score = 223 bits (568), Expect = 6e-56 Identities = 110/146 (75%), Positives = 127/146 (86%), Gaps = 1/146 (0%) Frame = +3 Query: 63 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 242 M E LFEDIF + R+DPDGKKFD+V+RIEARSEQF MYMQLDV T +YP++ G+KFTMVL Sbjct: 1 MAEHLFEDIFVVNRIDPDGKKFDRVNRIEARSEQFHMYMQLDVATYVYPMHAGDKFTMVL 60 Query: 243 APTLSLDGTPDTGYFMPGARKSLADKFEYVMHGKLYRISEEGSGIN-VKVEMYASFGGLL 419 APTL+LDGTPDTGY+ RK+LADK++YVMHGKLY+ISE+ SG KVE YASFGGLL Sbjct: 61 APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDSSGGQAAKVETYASFGGLL 120 Query: 420 MLLKGDPSNAAHFELDQRLFLLMRKV 497 MLLKGDPS+AA+ ELDQRLFLLMRKV Sbjct: 121 MLLKGDPSSAANLELDQRLFLLMRKV 146 >ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [Sorghum bicolor] gi|241919960|gb|EER93104.1| hypothetical protein SORBIDRAFT_01g001330 [Sorghum bicolor] Length = 145 Score = 223 bits (568), Expect = 6e-56 Identities = 110/145 (75%), Positives = 123/145 (84%) Frame = +3 Query: 63 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 242 M E LFED F ++RLDPDGKKFDKVSR+EARSEQ MYMQLDV T++YPL GEKF MVL Sbjct: 1 MSEHLFEDTFIVSRLDPDGKKFDKVSRVEARSEQLGMYMQLDVATDVYPLRAGEKFNMVL 60 Query: 243 APTLSLDGTPDTGYFMPGARKSLADKFEYVMHGKLYRISEEGSGINVKVEMYASFGGLLM 422 APTL+LDGTPDTGY+ RK+LAD +EYVM GKLY+ISE+ S N KVE+YASFGGLLM Sbjct: 61 APTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSQNAKVEIYASFGGLLM 120 Query: 423 LLKGDPSNAAHFELDQRLFLLMRKV 497 LL+GDPS AA FELDQRLFLLMRKV Sbjct: 121 LLRGDPSTAASFELDQRLFLLMRKV 145 >gb|EEC76521.1| hypothetical protein OsI_14307 [Oryza sativa Indica Group] Length = 215 Score = 223 bits (568), Expect = 6e-56 Identities = 109/148 (73%), Positives = 130/148 (87%), Gaps = 3/148 (2%) Frame = +3 Query: 63 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 242 M E LFEDIFT+TRLDPDGKKFD+VSRIEARS+QFDMYMQLDV T++YP++ G++FTMVL Sbjct: 68 MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMVL 127 Query: 243 APTLSLDGTPDTGYFMPGARKSLADKFEYVMHGKLYRISEEGSGIN---VKVEMYASFGG 413 PTL+LDGTPD+ +F RK+LADK+EYVMHGKLY+ISE+ + KVEMYASFGG Sbjct: 128 VPTLNLDGTPDSAFFTQAGRKTLADKYEYVMHGKLYKISEDKDTSDQNAKKVEMYASFGG 187 Query: 414 LLMLLKGDPSNAAHFELDQRLFLLMRKV 497 LL++LKGDPS+AA+FELDQRLFLLMRKV Sbjct: 188 LLVMLKGDPSSAANFELDQRLFLLMRKV 215 >ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citrus clementina] gi|568850174|ref|XP_006478800.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 8B-like [Citrus sinensis] gi|557545143|gb|ESR56121.1| hypothetical protein CICLE_v10022723mg [Citrus clementina] Length = 146 Score = 222 bits (565), Expect = 1e-55 Identities = 101/142 (71%), Positives = 126/142 (88%) Frame = +3 Query: 72 LLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVLAPT 251 +LFEDIF + ++DPDGKKFDKVSRIEA S+ DMYM LDVN+E+YP+ +G+KFTM LA T Sbjct: 5 VLFEDIFVVEKIDPDGKKFDKVSRIEAHSQNCDMYMLLDVNSELYPMRVGDKFTMALAHT 64 Query: 252 LSLDGTPDTGYFMPGARKSLADKFEYVMHGKLYRISEEGSGINVKVEMYASFGGLLMLLK 431 L+LDGTPDTGY+ PGARK+LADK+EY+MHGKL++I +EGSG ++K E+Y S+GGLLM+LK Sbjct: 65 LNLDGTPDTGYYTPGARKTLADKYEYIMHGKLFKIGDEGSGKSLKAEIYVSYGGLLMMLK 124 Query: 432 GDPSNAAHFELDQRLFLLMRKV 497 GDPS +HFELDQRLFLLMRK+ Sbjct: 125 GDPSYVSHFELDQRLFLLMRKL 146 >ref|NP_001147399.1| LOC100281008 [Zea mays] gi|194699730|gb|ACF83949.1| unknown [Zea mays] gi|195607894|gb|ACG25777.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide [Zea mays] gi|195608506|gb|ACG26083.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide [Zea mays] gi|195611040|gb|ACG27350.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide [Zea mays] gi|195649823|gb|ACG44379.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide [Zea mays] gi|195653495|gb|ACG46215.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide [Zea mays] gi|238014148|gb|ACR38109.1| unknown [Zea mays] gi|413932441|gb|AFW66992.1| DNA-directed RNA polymerase I, II, and III polypeptide isoform 1 [Zea mays] gi|413932442|gb|AFW66993.1| DNA-directed RNA polymerase I, II, and III polypeptide isoform 2 [Zea mays] gi|413932443|gb|AFW66994.1| DNA-directed RNA polymerase I, II, and III polypeptide isoform 3 [Zea mays] gi|413932444|gb|AFW66995.1| DNA-directed RNA polymerase I, II, and III polypeptide isoform 4 [Zea mays] Length = 146 Score = 221 bits (564), Expect = 2e-55 Identities = 109/146 (74%), Positives = 125/146 (85%), Gaps = 1/146 (0%) Frame = +3 Query: 63 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 242 M E LFED F +TRLDPDGKKFD+VSR+EARSEQ DMYMQLDV T++YP++ GEKF MV+ Sbjct: 1 MSEHLFEDTFVVTRLDPDGKKFDRVSRVEARSEQLDMYMQLDVATDVYPMHAGEKFNMVI 60 Query: 243 APTLSLDGTPDTGYFMPGARKSLADKFEYVMHGKLYRISEE-GSGINVKVEMYASFGGLL 419 APTL+LDGTPDTGY+ RK+LAD +EYVM GKLY+ISE+ S N KVEMYASFGGLL Sbjct: 61 APTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSSQNAKVEMYASFGGLL 120 Query: 420 MLLKGDPSNAAHFELDQRLFLLMRKV 497 MLL+GDPS AA FELDQRLFLL+RKV Sbjct: 121 MLLRGDPSTAASFELDQRLFLLIRKV 146 >ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide, putative [Ricinus communis] gi|223530164|gb|EEF32075.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide, putative [Ricinus communis] Length = 146 Score = 221 bits (563), Expect = 2e-55 Identities = 105/142 (73%), Positives = 125/142 (88%) Frame = +3 Query: 72 LLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVLAPT 251 +LFEDIF + +LDPDGKKFDKVSRIEA S+ DM+M LDVNTEIYP+ +G+KFTM LA T Sbjct: 5 VLFEDIFVVDKLDPDGKKFDKVSRIEAHSQNCDMFMHLDVNTEIYPMAVGDKFTMALAHT 64 Query: 252 LSLDGTPDTGYFMPGARKSLADKFEYVMHGKLYRISEEGSGINVKVEMYASFGGLLMLLK 431 L+LDGTPDTGY+ GARK+LADK+EY+M+GKLY+ISEEGSG VK EM S+GGLLMLL+ Sbjct: 65 LNLDGTPDTGYYTQGARKTLADKYEYIMNGKLYKISEEGSGKAVKAEMLVSYGGLLMLLR 124 Query: 432 GDPSNAAHFELDQRLFLLMRKV 497 GDPS+ +HFELDQRLFLLMRK+ Sbjct: 125 GDPSHVSHFELDQRLFLLMRKL 146 >gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subunit rpabc3 [Aegilops tauschii] Length = 220 Score = 221 bits (562), Expect = 3e-55 Identities = 106/148 (71%), Positives = 131/148 (88%), Gaps = 3/148 (2%) Frame = +3 Query: 63 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 242 M E LFEDIF +TR+DPDGKKFD+V+RIEARSEQ +MYMQLD+ T++YP+++G+KFTMVL Sbjct: 1 MAEHLFEDIFHVTRIDPDGKKFDRVNRIEARSEQLEMYMQLDIATDVYPMHMGDKFTMVL 60 Query: 243 APTLSLDGTPDTGYFMPGARKSLADKFEYVMHGKLYRISEEGSGIN---VKVEMYASFGG 413 APTL+LDGTPDTGY+ RK+LADK++YVMHGKLY+ISE+ S + KVE+YASFGG Sbjct: 61 APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDNSSKDKGPTKVEIYASFGG 120 Query: 414 LLMLLKGDPSNAAHFELDQRLFLLMRKV 497 LLMLLKGDPS+AA+ ELDQ+LFLL+RKV Sbjct: 121 LLMLLKGDPSSAANLELDQKLFLLIRKV 148 >ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [Sorghum bicolor] gi|241917379|gb|EER90523.1| hypothetical protein SORBIDRAFT_01g001420 [Sorghum bicolor] Length = 145 Score = 221 bits (562), Expect = 3e-55 Identities = 108/145 (74%), Positives = 122/145 (84%) Frame = +3 Query: 63 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 242 M E LFED F + RLDPDGKKFD+VSR+EARSEQ MYMQLDV T++YP+ EKF MVL Sbjct: 1 MSEHLFEDTFVVNRLDPDGKKFDRVSRVEARSEQLAMYMQLDVATDVYPMQPNEKFNMVL 60 Query: 243 APTLSLDGTPDTGYFMPGARKSLADKFEYVMHGKLYRISEEGSGINVKVEMYASFGGLLM 422 APTL+LDGTPDTGY+ RK+LAD +EYVMHGKLY+ISE+ S N KVE+YASFGGLLM Sbjct: 61 APTLNLDGTPDTGYYTQAGRKTLADNYEYVMHGKLYKISEDTSSQNAKVEIYASFGGLLM 120 Query: 423 LLKGDPSNAAHFELDQRLFLLMRKV 497 LL+GDPS AA FELDQRLFLLMRKV Sbjct: 121 LLRGDPSTAASFELDQRLFLLMRKV 145 >gb|ACG27451.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide [Zea mays] Length = 146 Score = 220 bits (561), Expect = 4e-55 Identities = 108/146 (73%), Positives = 125/146 (85%), Gaps = 1/146 (0%) Frame = +3 Query: 63 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 242 M + LFED F +TRLDPDGKKFD+VSR+EARSEQ DMYMQLDV T++YP++ GEKF MV+ Sbjct: 1 MSDHLFEDTFVVTRLDPDGKKFDRVSRVEARSEQLDMYMQLDVATDVYPMHAGEKFNMVI 60 Query: 243 APTLSLDGTPDTGYFMPGARKSLADKFEYVMHGKLYRISEE-GSGINVKVEMYASFGGLL 419 APTL+LDGTPDTGY+ RK+LAD +EYVM GKLY+ISE+ S N KVEMYASFGGLL Sbjct: 61 APTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSSQNAKVEMYASFGGLL 120 Query: 420 MLLKGDPSNAAHFELDQRLFLLMRKV 497 MLL+GDPS AA FELDQRLFLL+RKV Sbjct: 121 MLLRGDPSTAASFELDQRLFLLIRKV 146 >ref|XP_003563485.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit rpabc3-like [Brachypodium distachyon] Length = 144 Score = 219 bits (557), Expect = 1e-54 Identities = 109/146 (74%), Positives = 129/146 (88%), Gaps = 1/146 (0%) Frame = +3 Query: 63 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 242 M E LFEDIF ++R+DPDGKKFD+V+RIEARSEQ MYMQLDV T++YP++ G+KFTMVL Sbjct: 1 MAEHLFEDIFVVSRIDPDGKKFDRVNRIEARSEQ--MYMQLDVATDVYPMHAGDKFTMVL 58 Query: 243 APTLSLDGTPDTGYFMPGARKSLADKFEYVMHGKLYRISEEGSGIN-VKVEMYASFGGLL 419 APTL+LDGTPDTGY+ RK+LADK++YVMHGKLY+ISE+ SG KVE+YASFGGLL Sbjct: 59 APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDSSGGQAAKVEIYASFGGLL 118 Query: 420 MLLKGDPSNAAHFELDQRLFLLMRKV 497 MLLKGDPS+AA+ ELDQRLFLLMRKV Sbjct: 119 MLLKGDPSSAANLELDQRLFLLMRKV 144 >ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit rpabc3 isoform 1 [Vitis vinifera] gi|359478220|ref|XP_003632088.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit rpabc3 isoform 2 [Vitis vinifera] gi|296084252|emb|CBI24640.3| unnamed protein product [Vitis vinifera] Length = 145 Score = 218 bits (556), Expect = 1e-54 Identities = 107/145 (73%), Positives = 121/145 (83%) Frame = +3 Query: 63 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 242 M LF DIF + ++DPDGKKFDKVSRIEA+SEQ DMYMQLDVNTEIYP++ GEKF M L Sbjct: 1 MENTLFGDIFKVIQIDPDGKKFDKVSRIEAQSEQLDMYMQLDVNTEIYPMHAGEKFAMSL 60 Query: 243 APTLSLDGTPDTGYFMPGARKSLADKFEYVMHGKLYRISEEGSGINVKVEMYASFGGLLM 422 A TL LDGTPDTGY+ RKSLADKFEYVMHGKLY+ISEEGSG NVK +Y SFGGLLM Sbjct: 61 ASTLDLDGTPDTGYYTQAGRKSLADKFEYVMHGKLYKISEEGSGPNVKGVIYVSFGGLLM 120 Query: 423 LLKGDPSNAAHFELDQRLFLLMRKV 497 +L GDP+N A +LDQR+FLL+RKV Sbjct: 121 MLSGDPANTAKLDLDQRVFLLIRKV 145 >ref|NP_191519.1| RNA polymerase Rpb8 [Arabidopsis thaliana] gi|297817262|ref|XP_002876514.1| hypothetical protein ARALYDRAFT_907465 [Arabidopsis lyrata subsp. lyrata] gi|565468254|ref|XP_006292007.1| hypothetical protein CARUB_v10018195mg [Capsella rubella] gi|75335784|sp|Q9M1A8.1|RPB8B_ARATH RecName: Full=DNA-directed RNA polymerases II, IV and V subunit 8B; AltName: Full=RNA polymerase Rpb8 gi|6996296|emb|CAB75457.1| putative protein [Arabidopsis thaliana] gi|21554131|gb|AAM63211.1| RNA polymerase II subunit, putative [Arabidopsis thaliana] gi|26453032|dbj|BAC43592.1| unknown protein [Arabidopsis thaliana] gi|30793811|gb|AAP40358.1| unknown protein [Arabidopsis thaliana] gi|297322352|gb|EFH52773.1| hypothetical protein ARALYDRAFT_907465 [Arabidopsis lyrata subsp. lyrata] gi|332646423|gb|AEE79944.1| RNA polymerase Rpb8 [Arabidopsis thaliana] gi|482560714|gb|EOA24905.1| hypothetical protein CARUB_v10018195mg [Capsella rubella] Length = 146 Score = 216 bits (551), Expect = 5e-54 Identities = 99/142 (69%), Positives = 124/142 (87%) Frame = +3 Query: 72 LLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVLAPT 251 ++FEDIF + +LDPDGKKFDKV+R+EARS +M+M LDVNTE+YPL +G+KFT+ +APT Sbjct: 6 IMFEDIFVVDKLDPDGKKFDKVTRVEARSHNLEMFMHLDVNTEVYPLAVGDKFTLAMAPT 65 Query: 252 LSLDGTPDTGYFMPGARKSLADKFEYVMHGKLYRISEEGSGINVKVEMYASFGGLLMLLK 431 L+LDGTPDTGYF PGA+K+LADK+EY+MHGKLY+ISE G K E+Y SFGGLLMLL+ Sbjct: 66 LNLDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKISER-DGKTPKAELYVSFGGLLMLLQ 124 Query: 432 GDPSNAAHFELDQRLFLLMRKV 497 GDP++ +HFELDQRLFLLMRK+ Sbjct: 125 GDPAHISHFELDQRLFLLMRKL 146