BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00010623
         (685 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26380.1| unknown [Picea sitchensis]                             246   6e-63
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s...   233   4e-59
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi...   233   4e-59
ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, ...   232   7e-59
ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, ...   231   2e-58
ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, I...   228   1e-57
ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, ...   228   1e-57
ref|NP_001051880.1| Os03g0845700 [Oryza sativa Japonica Group] g...   222   1e-55
ref|XP_003580476.1| PREDICTED: DNA-directed RNA polymerases I, I...   222   1e-55
ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [S...   222   1e-55
gb|EEC76521.1| hypothetical protein OsI_14307 [Oryza sativa Indi...   222   1e-55
ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citr...   220   3e-55
ref|NP_001147399.1| LOC100281008 [Zea mays] gi|194699730|gb|ACF8...   220   3e-55
gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subun...   219   5e-55
ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [S...   219   5e-55
ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III ...   219   5e-55
gb|ACG27451.1| DNA-directed RNA polymerases I, II, and III 17.1 ...   219   6e-55
ref|XP_003563485.1| PREDICTED: DNA-directed RNA polymerases I, I...   218   2e-54
ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, I...   217   2e-54
ref|XP_004152137.1| PREDICTED: DNA-directed RNA polymerases I, I...   216   7e-54

>gb|ABK26380.1| unknown [Picea sitchensis]
          Length = 145

 Score =  246 bits (627), Expect = 6e-63
 Identities = 119/145 (82%), Positives = 134/145 (92%)
 Frame = -3

Query: 590 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 411
           MVELLFEDIFT+TR+DPDGKKFDKVSRIEARSEQFDMYM LDVN ++YP+++GEKF + L
Sbjct: 1   MVELLFEDIFTVTRIDPDGKKFDKVSRIEARSEQFDMYMLLDVNIDVYPVSVGEKFAVAL 60

Query: 410 APTLSLDGTPDTGYFMPGVRKSLADKFEYVMHGKLYRISEEGSGINVKVEMYASFGGLLM 231
           APTL+LDGTPD GYF+ G RKSLADK+EYVM+GKLY +SEEGSG NVKVE+ ASFGGLLM
Sbjct: 61  APTLNLDGTPDNGYFIQGGRKSLADKYEYVMYGKLYNLSEEGSGANVKVEINASFGGLLM 120

Query: 230 LLKGDPSNAAHFELDQRLFLLMRKV 156
           LLKGDPSNA +FELDQRLFLLMRKV
Sbjct: 121 LLKGDPSNAGNFELDQRLFLLMRKV 145


>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
           sativa Japonica Group]
          Length = 396

 Score =  233 bits (594), Expect = 4e-59
 Identities = 115/147 (78%), Positives = 133/147 (90%), Gaps = 1/147 (0%)
 Frame = -3

Query: 593 RMVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMV 414
           +MVE LFEDIFT+TRLDPDGKKFD+VSRIEARSEQFDMYMQLDV TE+YP+  G++FTMV
Sbjct: 250 KMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMV 309

Query: 413 LAPTLSLDGTPDTGYFMPGVRKSLADKFEYVMHGKLYRISEE-GSGINVKVEMYASFGGL 237
           LAPTL+LDGTPDTG++    RK+LADKF+YVMHGKLY+ISE+  SG   KVE+YASFGGL
Sbjct: 310 LAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGL 369

Query: 236 LMLLKGDPSNAAHFELDQRLFLLMRKV 156
           LM+LKGDPS+AA FELDQRLFLL+RKV
Sbjct: 370 LMMLKGDPSSAASFELDQRLFLLIRKV 396


>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
           gi|125598367|gb|EAZ38147.1| hypothetical protein
           OsJ_22498 [Oryza sativa Japonica Group]
          Length = 191

 Score =  233 bits (594), Expect = 4e-59
 Identities = 115/147 (78%), Positives = 133/147 (90%), Gaps = 1/147 (0%)
 Frame = -3

Query: 593 RMVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMV 414
           +MVE LFEDIFT+TRLDPDGKKFD+VSRIEARSEQFDMYMQLDV TE+YP+  G++FTMV
Sbjct: 45  KMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMV 104

Query: 413 LAPTLSLDGTPDTGYFMPGVRKSLADKFEYVMHGKLYRISEE-GSGINVKVEMYASFGGL 237
           LAPTL+LDGTPDTG++    RK+LADKF+YVMHGKLY+ISE+  SG   KVE+YASFGGL
Sbjct: 105 LAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGL 164

Query: 236 LMLLKGDPSNAAHFELDQRLFLLMRKV 156
           LM+LKGDPS+AA FELDQRLFLL+RKV
Sbjct: 165 LMMLKGDPSSAASFELDQRLFLLIRKV 191


>ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like isoform X1 [Oryza brachyantha]
           gi|573948243|ref|XP_006656428.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like isoform X2
           [Oryza brachyantha] gi|573948245|ref|XP_006656429.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 8B-like isoform X3 [Oryza brachyantha]
           gi|573948247|ref|XP_006656430.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like isoform X4
           [Oryza brachyantha] gi|573948249|ref|XP_006656431.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 8B-like isoform X5 [Oryza brachyantha]
          Length = 146

 Score =  232 bits (592), Expect = 7e-59
 Identities = 115/146 (78%), Positives = 132/146 (90%), Gaps = 1/146 (0%)
 Frame = -3

Query: 590 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 411
           MVE LFEDIFT+TRLDPDGKKFD+VSRIEARSEQFDMYMQLDV TE+YP+  G+KFTMVL
Sbjct: 1   MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRPGDKFTMVL 60

Query: 410 APTLSLDGTPDTGYFMPGVRKSLADKFEYVMHGKLYRISEEGSGIN-VKVEMYASFGGLL 234
           APTL+LDGTPD G++    RK+LADK++YVMHGKLY+ISE+GSG    KVE+YASFGGLL
Sbjct: 61  APTLNLDGTPDIGFYTQAGRKTLADKYDYVMHGKLYKISEDGSGGQATKVEIYASFGGLL 120

Query: 233 MLLKGDPSNAAHFELDQRLFLLMRKV 156
           M+LKGDPS AA+FELDQRLFLL+RKV
Sbjct: 121 MMLKGDPSTAANFELDQRLFLLIRKV 146


>ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Oryza brachyantha]
          Length = 147

 Score =  231 bits (589), Expect = 2e-58
 Identities = 114/147 (77%), Positives = 132/147 (89%), Gaps = 2/147 (1%)
 Frame = -3

Query: 590 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 411
           M E LFEDIFT+TRLDPDGKKFD+VSRIEAR+EQ ++YMQLDV T++YP++ G+KFTMVL
Sbjct: 1   MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARNEQLNVYMQLDVATDVYPMHPGDKFTMVL 60

Query: 410 APTLSLDGTPDTGYFMPGVRKSLADKFEYVMHGKLYRISE--EGSGINVKVEMYASFGGL 237
            PTL+LDGTPDTG+F    RK+LADK+EYVMHGKLY+ISE  E SG N KVEMYASFGGL
Sbjct: 61  VPTLNLDGTPDTGFFTQAGRKTLADKYEYVMHGKLYKISEDKETSGQNAKVEMYASFGGL 120

Query: 236 LMLLKGDPSNAAHFELDQRLFLLMRKV 156
           LM+LKGDPS+AA+FELDQRLFLLMRKV
Sbjct: 121 LMMLKGDPSSAANFELDQRLFLLMRKV 147


>ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like isoform 1 [Solanum lycopersicum]
           gi|460377396|ref|XP_004234479.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit rpabc3-like
           isoform 2 [Solanum lycopersicum]
          Length = 145

 Score =  228 bits (582), Expect = 1e-57
 Identities = 111/145 (76%), Positives = 130/145 (89%)
 Frame = -3

Query: 590 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 411
           MVE LFEDIFT+T+ DPDGKKFD+V+RIEARSEQFDM+M LDVNTEIYP+ + +KF MVL
Sbjct: 1   MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDVNTEIYPMRVKDKFMMVL 60

Query: 410 APTLSLDGTPDTGYFMPGVRKSLADKFEYVMHGKLYRISEEGSGINVKVEMYASFGGLLM 231
           A TL+LDGTPDTGYF+ G +KSLADKFEYVMHGKLYRISEEGSG +VK +++ SFGGLLM
Sbjct: 61  ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120

Query: 230 LLKGDPSNAAHFELDQRLFLLMRKV 156
            L+GDPS AA FELDQ++FLL+RKV
Sbjct: 121 QLRGDPSIAAKFELDQKIFLLIRKV 145


>ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Solanum tuberosum]
          Length = 145

 Score =  228 bits (581), Expect = 1e-57
 Identities = 110/145 (75%), Positives = 130/145 (89%)
 Frame = -3

Query: 590 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 411
           MVE LFEDIFT+T+ DPDGKKFD+V+RIEARSEQFDM+M LD+NTEIYP+ + +KF MVL
Sbjct: 1   MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDINTEIYPMRVKDKFMMVL 60

Query: 410 APTLSLDGTPDTGYFMPGVRKSLADKFEYVMHGKLYRISEEGSGINVKVEMYASFGGLLM 231
           A TL+LDGTPDTGYF+ G +KSLADKFEYVMHGKLYRISEEGSG +VK +++ SFGGLLM
Sbjct: 61  ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120

Query: 230 LLKGDPSNAAHFELDQRLFLLMRKV 156
            L+GDPS AA FELDQ++FLL+RKV
Sbjct: 121 QLRGDPSIAAKFELDQKIFLLIRKV 145


>ref|NP_001051880.1| Os03g0845700 [Oryza sativa Japonica Group]
           gi|29244685|gb|AAO73277.1| putative RNA polymerase
           [Oryza sativa Japonica Group] gi|41469638|gb|AAS07361.1|
           putative RNA polymerase [Oryza sativa Japonica Group]
           gi|108712076|gb|ABF99871.1| RNA polymerase Rpb8 family
           protein, expressed [Oryza sativa Japonica Group]
           gi|108712077|gb|ABF99872.1| RNA polymerase Rpb8 family
           protein, expressed [Oryza sativa Japonica Group]
           gi|113550351|dbj|BAF13794.1| Os03g0845700 [Oryza sativa
           Japonica Group] gi|125588624|gb|EAZ29288.1| hypothetical
           protein OsJ_13351 [Oryza sativa Japonica Group]
           gi|215692970|dbj|BAG88390.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 148

 Score =  222 bits (565), Expect = 1e-55
 Identities = 109/148 (73%), Positives = 130/148 (87%), Gaps = 3/148 (2%)
 Frame = -3

Query: 590 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 411
           M E LFEDIFT+TRLDPDGKKFD+VSRIEARS+QFDMYMQLDV T++YP++ G++FTMVL
Sbjct: 1   MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMVL 60

Query: 410 APTLSLDGTPDTGYFMPGVRKSLADKFEYVMHGKLYRISEEGSGIN---VKVEMYASFGG 240
            PTL+LDGTPD+ +F    RK+LADK+EYVMHGKLY+ISE+    +    KVEMYASFGG
Sbjct: 61  VPTLNLDGTPDSAFFTQAGRKTLADKYEYVMHGKLYKISEDKDTSDQNAKKVEMYASFGG 120

Query: 239 LLMLLKGDPSNAAHFELDQRLFLLMRKV 156
           LL++LKGDPS+AA+FELDQRLFLLMRKV
Sbjct: 121 LLVMLKGDPSSAANFELDQRLFLLMRKV 148


>ref|XP_003580476.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like [Brachypodium distachyon]
          Length = 146

 Score =  222 bits (565), Expect = 1e-55
 Identities = 110/146 (75%), Positives = 127/146 (86%), Gaps = 1/146 (0%)
 Frame = -3

Query: 590 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 411
           M E LFEDIF + R+DPDGKKFD+V+RIEARSEQF MYMQLDV T +YP++ G+KFTMVL
Sbjct: 1   MAEHLFEDIFVVNRIDPDGKKFDRVNRIEARSEQFHMYMQLDVATYVYPMHAGDKFTMVL 60

Query: 410 APTLSLDGTPDTGYFMPGVRKSLADKFEYVMHGKLYRISEEGSGIN-VKVEMYASFGGLL 234
           APTL+LDGTPDTGY+    RK+LADK++YVMHGKLY+ISE+ SG    KVE YASFGGLL
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDSSGGQAAKVETYASFGGLL 120

Query: 233 MLLKGDPSNAAHFELDQRLFLLMRKV 156
           MLLKGDPS+AA+ ELDQRLFLLMRKV
Sbjct: 121 MLLKGDPSSAANLELDQRLFLLMRKV 146


>ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [Sorghum bicolor]
           gi|241919960|gb|EER93104.1| hypothetical protein
           SORBIDRAFT_01g001330 [Sorghum bicolor]
          Length = 145

 Score =  222 bits (565), Expect = 1e-55
 Identities = 110/145 (75%), Positives = 123/145 (84%)
 Frame = -3

Query: 590 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 411
           M E LFED F ++RLDPDGKKFDKVSR+EARSEQ  MYMQLDV T++YPL  GEKF MVL
Sbjct: 1   MSEHLFEDTFIVSRLDPDGKKFDKVSRVEARSEQLGMYMQLDVATDVYPLRAGEKFNMVL 60

Query: 410 APTLSLDGTPDTGYFMPGVRKSLADKFEYVMHGKLYRISEEGSGINVKVEMYASFGGLLM 231
           APTL+LDGTPDTGY+    RK+LAD +EYVM GKLY+ISE+ S  N KVE+YASFGGLLM
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSQNAKVEIYASFGGLLM 120

Query: 230 LLKGDPSNAAHFELDQRLFLLMRKV 156
           LL+GDPS AA FELDQRLFLLMRKV
Sbjct: 121 LLRGDPSTAASFELDQRLFLLMRKV 145


>gb|EEC76521.1| hypothetical protein OsI_14307 [Oryza sativa Indica Group]
          Length = 215

 Score =  222 bits (565), Expect = 1e-55
 Identities = 109/148 (73%), Positives = 130/148 (87%), Gaps = 3/148 (2%)
 Frame = -3

Query: 590 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 411
           M E LFEDIFT+TRLDPDGKKFD+VSRIEARS+QFDMYMQLDV T++YP++ G++FTMVL
Sbjct: 68  MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMVL 127

Query: 410 APTLSLDGTPDTGYFMPGVRKSLADKFEYVMHGKLYRISEEGSGIN---VKVEMYASFGG 240
            PTL+LDGTPD+ +F    RK+LADK+EYVMHGKLY+ISE+    +    KVEMYASFGG
Sbjct: 128 VPTLNLDGTPDSAFFTQAGRKTLADKYEYVMHGKLYKISEDKDTSDQNAKKVEMYASFGG 187

Query: 239 LLMLLKGDPSNAAHFELDQRLFLLMRKV 156
           LL++LKGDPS+AA+FELDQRLFLLMRKV
Sbjct: 188 LLVMLKGDPSSAANFELDQRLFLLMRKV 215


>ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citrus clementina]
           gi|568850174|ref|XP_006478800.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like [Citrus
           sinensis] gi|557545143|gb|ESR56121.1| hypothetical
           protein CICLE_v10022723mg [Citrus clementina]
          Length = 146

 Score =  220 bits (561), Expect = 3e-55
 Identities = 100/142 (70%), Positives = 125/142 (88%)
 Frame = -3

Query: 581 LLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVLAPT 402
           +LFEDIF + ++DPDGKKFDKVSRIEA S+  DMYM LDVN+E+YP+ +G+KFTM LA T
Sbjct: 5   VLFEDIFVVEKIDPDGKKFDKVSRIEAHSQNCDMYMLLDVNSELYPMRVGDKFTMALAHT 64

Query: 401 LSLDGTPDTGYFMPGVRKSLADKFEYVMHGKLYRISEEGSGINVKVEMYASFGGLLMLLK 222
           L+LDGTPDTGY+ PG RK+LADK+EY+MHGKL++I +EGSG ++K E+Y S+GGLLM+LK
Sbjct: 65  LNLDGTPDTGYYTPGARKTLADKYEYIMHGKLFKIGDEGSGKSLKAEIYVSYGGLLMMLK 124

Query: 221 GDPSNAAHFELDQRLFLLMRKV 156
           GDPS  +HFELDQRLFLLMRK+
Sbjct: 125 GDPSYVSHFELDQRLFLLMRKL 146


>ref|NP_001147399.1| LOC100281008 [Zea mays] gi|194699730|gb|ACF83949.1| unknown [Zea
           mays] gi|195607894|gb|ACG25777.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|195608506|gb|ACG26083.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|195611040|gb|ACG27350.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|195649823|gb|ACG44379.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|195653495|gb|ACG46215.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|238014148|gb|ACR38109.1| unknown [Zea mays]
           gi|413932441|gb|AFW66992.1| DNA-directed RNA polymerase
           I, II, and III polypeptide isoform 1 [Zea mays]
           gi|413932442|gb|AFW66993.1| DNA-directed RNA polymerase
           I, II, and III polypeptide isoform 2 [Zea mays]
           gi|413932443|gb|AFW66994.1| DNA-directed RNA polymerase
           I, II, and III polypeptide isoform 3 [Zea mays]
           gi|413932444|gb|AFW66995.1| DNA-directed RNA polymerase
           I, II, and III polypeptide isoform 4 [Zea mays]
          Length = 146

 Score =  220 bits (561), Expect = 3e-55
 Identities = 109/146 (74%), Positives = 125/146 (85%), Gaps = 1/146 (0%)
 Frame = -3

Query: 590 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 411
           M E LFED F +TRLDPDGKKFD+VSR+EARSEQ DMYMQLDV T++YP++ GEKF MV+
Sbjct: 1   MSEHLFEDTFVVTRLDPDGKKFDRVSRVEARSEQLDMYMQLDVATDVYPMHAGEKFNMVI 60

Query: 410 APTLSLDGTPDTGYFMPGVRKSLADKFEYVMHGKLYRISEE-GSGINVKVEMYASFGGLL 234
           APTL+LDGTPDTGY+    RK+LAD +EYVM GKLY+ISE+  S  N KVEMYASFGGLL
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSSQNAKVEMYASFGGLL 120

Query: 233 MLLKGDPSNAAHFELDQRLFLLMRKV 156
           MLL+GDPS AA FELDQRLFLL+RKV
Sbjct: 121 MLLRGDPSTAASFELDQRLFLLIRKV 146


>gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subunit rpabc3
           [Aegilops tauschii]
          Length = 220

 Score =  219 bits (559), Expect = 5e-55
 Identities = 106/148 (71%), Positives = 131/148 (88%), Gaps = 3/148 (2%)
 Frame = -3

Query: 590 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 411
           M E LFEDIF +TR+DPDGKKFD+V+RIEARSEQ +MYMQLD+ T++YP+++G+KFTMVL
Sbjct: 1   MAEHLFEDIFHVTRIDPDGKKFDRVNRIEARSEQLEMYMQLDIATDVYPMHMGDKFTMVL 60

Query: 410 APTLSLDGTPDTGYFMPGVRKSLADKFEYVMHGKLYRISEEGSGIN---VKVEMYASFGG 240
           APTL+LDGTPDTGY+    RK+LADK++YVMHGKLY+ISE+ S  +    KVE+YASFGG
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDNSSKDKGPTKVEIYASFGG 120

Query: 239 LLMLLKGDPSNAAHFELDQRLFLLMRKV 156
           LLMLLKGDPS+AA+ ELDQ+LFLL+RKV
Sbjct: 121 LLMLLKGDPSSAANLELDQKLFLLIRKV 148


>ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [Sorghum bicolor]
           gi|241917379|gb|EER90523.1| hypothetical protein
           SORBIDRAFT_01g001420 [Sorghum bicolor]
          Length = 145

 Score =  219 bits (559), Expect = 5e-55
 Identities = 108/145 (74%), Positives = 122/145 (84%)
 Frame = -3

Query: 590 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 411
           M E LFED F + RLDPDGKKFD+VSR+EARSEQ  MYMQLDV T++YP+   EKF MVL
Sbjct: 1   MSEHLFEDTFVVNRLDPDGKKFDRVSRVEARSEQLAMYMQLDVATDVYPMQPNEKFNMVL 60

Query: 410 APTLSLDGTPDTGYFMPGVRKSLADKFEYVMHGKLYRISEEGSGINVKVEMYASFGGLLM 231
           APTL+LDGTPDTGY+    RK+LAD +EYVMHGKLY+ISE+ S  N KVE+YASFGGLLM
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADNYEYVMHGKLYKISEDTSSQNAKVEIYASFGGLLM 120

Query: 230 LLKGDPSNAAHFELDQRLFLLMRKV 156
           LL+GDPS AA FELDQRLFLLMRKV
Sbjct: 121 LLRGDPSTAASFELDQRLFLLMRKV 145


>ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide,
           putative [Ricinus communis] gi|223530164|gb|EEF32075.1|
           DNA-directed RNA polymerases I, II, and III 17.1 kDa
           polypeptide, putative [Ricinus communis]
          Length = 146

 Score =  219 bits (559), Expect = 5e-55
 Identities = 104/142 (73%), Positives = 124/142 (87%)
 Frame = -3

Query: 581 LLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVLAPT 402
           +LFEDIF + +LDPDGKKFDKVSRIEA S+  DM+M LDVNTEIYP+ +G+KFTM LA T
Sbjct: 5   VLFEDIFVVDKLDPDGKKFDKVSRIEAHSQNCDMFMHLDVNTEIYPMAVGDKFTMALAHT 64

Query: 401 LSLDGTPDTGYFMPGVRKSLADKFEYVMHGKLYRISEEGSGINVKVEMYASFGGLLMLLK 222
           L+LDGTPDTGY+  G RK+LADK+EY+M+GKLY+ISEEGSG  VK EM  S+GGLLMLL+
Sbjct: 65  LNLDGTPDTGYYTQGARKTLADKYEYIMNGKLYKISEEGSGKAVKAEMLVSYGGLLMLLR 124

Query: 221 GDPSNAAHFELDQRLFLLMRKV 156
           GDPS+ +HFELDQRLFLLMRK+
Sbjct: 125 GDPSHVSHFELDQRLFLLMRKL 146


>gb|ACG27451.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide
           [Zea mays]
          Length = 146

 Score =  219 bits (558), Expect = 6e-55
 Identities = 108/146 (73%), Positives = 125/146 (85%), Gaps = 1/146 (0%)
 Frame = -3

Query: 590 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 411
           M + LFED F +TRLDPDGKKFD+VSR+EARSEQ DMYMQLDV T++YP++ GEKF MV+
Sbjct: 1   MSDHLFEDTFVVTRLDPDGKKFDRVSRVEARSEQLDMYMQLDVATDVYPMHAGEKFNMVI 60

Query: 410 APTLSLDGTPDTGYFMPGVRKSLADKFEYVMHGKLYRISEE-GSGINVKVEMYASFGGLL 234
           APTL+LDGTPDTGY+    RK+LAD +EYVM GKLY+ISE+  S  N KVEMYASFGGLL
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSSQNAKVEMYASFGGLL 120

Query: 233 MLLKGDPSNAAHFELDQRLFLLMRKV 156
           MLL+GDPS AA FELDQRLFLL+RKV
Sbjct: 121 MLLRGDPSTAASFELDQRLFLLIRKV 146


>ref|XP_003563485.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like [Brachypodium distachyon]
          Length = 144

 Score =  218 bits (554), Expect = 2e-54
 Identities = 109/146 (74%), Positives = 129/146 (88%), Gaps = 1/146 (0%)
 Frame = -3

Query: 590 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 411
           M E LFEDIF ++R+DPDGKKFD+V+RIEARSEQ  MYMQLDV T++YP++ G+KFTMVL
Sbjct: 1   MAEHLFEDIFVVSRIDPDGKKFDRVNRIEARSEQ--MYMQLDVATDVYPMHAGDKFTMVL 58

Query: 410 APTLSLDGTPDTGYFMPGVRKSLADKFEYVMHGKLYRISEEGSGIN-VKVEMYASFGGLL 234
           APTL+LDGTPDTGY+    RK+LADK++YVMHGKLY+ISE+ SG    KVE+YASFGGLL
Sbjct: 59  APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDSSGGQAAKVEIYASFGGLL 118

Query: 233 MLLKGDPSNAAHFELDQRLFLLMRKV 156
           MLLKGDPS+AA+ ELDQRLFLLMRKV
Sbjct: 119 MLLKGDPSSAANLELDQRLFLLMRKV 144


>ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3 isoform 1 [Vitis vinifera]
           gi|359478220|ref|XP_003632088.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit rpabc3 isoform 2
           [Vitis vinifera] gi|296084252|emb|CBI24640.3| unnamed
           protein product [Vitis vinifera]
          Length = 145

 Score =  217 bits (553), Expect = 2e-54
 Identities = 107/145 (73%), Positives = 121/145 (83%)
 Frame = -3

Query: 590 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 411
           M   LF DIF + ++DPDGKKFDKVSRIEA+SEQ DMYMQLDVNTEIYP++ GEKF M L
Sbjct: 1   MENTLFGDIFKVIQIDPDGKKFDKVSRIEAQSEQLDMYMQLDVNTEIYPMHAGEKFAMSL 60

Query: 410 APTLSLDGTPDTGYFMPGVRKSLADKFEYVMHGKLYRISEEGSGINVKVEMYASFGGLLM 231
           A TL LDGTPDTGY+    RKSLADKFEYVMHGKLY+ISEEGSG NVK  +Y SFGGLLM
Sbjct: 61  ASTLDLDGTPDTGYYTQAGRKSLADKFEYVMHGKLYKISEEGSGPNVKGVIYVSFGGLLM 120

Query: 230 LLKGDPSNAAHFELDQRLFLLMRKV 156
           +L GDP+N A  +LDQR+FLL+RKV
Sbjct: 121 MLSGDPANTAKLDLDQRVFLLIRKV 145


>ref|XP_004152137.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like [Cucumis sativus]
           gi|449484745|ref|XP_004156968.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit rpabc3-like
           [Cucumis sativus]
          Length = 144

 Score =  216 bits (549), Expect = 7e-54
 Identities = 107/145 (73%), Positives = 127/145 (87%)
 Frame = -3

Query: 590 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNIGEKFTMVL 411
           MVELLF+DIF + RL+PDGKKFDKV+RIEA+SE+FDM+M LD+N+EIYPL  GEKF+M L
Sbjct: 1   MVELLFDDIFKIERLNPDGKKFDKVTRIEAKSEKFDMFMHLDINSEIYPLKEGEKFSMAL 60

Query: 410 APTLSLDGTPDTGYFMPGVRKSLADKFEYVMHGKLYRISEEGSGINVKVEMYASFGGLLM 231
           APTL+LDGTPDTGYF+ G RKSLAD++EYVM GKL+RIS E SG   K E+ ASFGGLLM
Sbjct: 61  APTLNLDGTPDTGYFLQGNRKSLADRYEYVMQGKLFRIS-ESSGHGGKAEIDASFGGLLM 119

Query: 230 LLKGDPSNAAHFELDQRLFLLMRKV 156
           +LKGDPS+ + FELDQRLFLL+RKV
Sbjct: 120 MLKGDPSHCSKFELDQRLFLLIRKV 144