BLASTX nr result

ID: Akebia22_contig00008468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00008468
         (620 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS74694.1| hypothetical protein M569_00069 [Genlisea aurea]        47   3e-09
ref|NP_064004.1| orf107b gene product (mitochondrion) [Beta vulg...    49   5e-07

>gb|EPS74694.1| hypothetical protein M569_00069 [Genlisea aurea]
          Length = 190

 Score = 46.6 bits (109), Expect(2) = 3e-09
 Identities = 22/27 (81%), Positives = 23/27 (85%)
 Frame = +3

Query: 249 RARQNASLVRDEAKPIHTIGEGSTPPF 329
           R RQNASLVRDEAKP +TIGEG TP F
Sbjct: 80  RRRQNASLVRDEAKPKYTIGEGKTPHF 106



 Score = 40.8 bits (94), Expect(2) = 3e-09
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = +1

Query: 322 PHFIAPGERKFDRGLER 372
           PHFIAPGERKFDRGLER
Sbjct: 104 PHFIAPGERKFDRGLER 120


>ref|NP_064004.1| orf107b gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] gi|323435151|ref|YP_004222369.1| hypothetical
           protein BevumaM_p136 [Beta vulgaris subsp. maritima]
           gi|346683242|ref|YP_004842174.1| hypothetical protein
           BemaM_p130 [Beta macrocarpa] gi|9049306|dbj|BAA99316.1|
           orf107b [Beta vulgaris subsp. vulgaris]
           gi|317905601|emb|CBJ14008.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439884|emb|CBJ17584.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148038|emb|CBJ20702.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500160|emb|CBX24979.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977914|emb|CBL54138.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 107

 Score = 48.5 bits (114), Expect(2) = 5e-07
 Identities = 24/32 (75%), Positives = 27/32 (84%)
 Frame = -2

Query: 322 GVLPSPIVCIGLASSRTKEAFWRARACRNADY 227
           GV PSPIVCIGLASSR+K  + RARACR AD+
Sbjct: 74  GVFPSPIVCIGLASSRSK-LYLRARACRKADH 104



 Score = 31.6 bits (70), Expect(2) = 5e-07
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -3

Query: 372 PLQSSIKLAFPRRYEMG 322
           PLQSSIKLAF RR EMG
Sbjct: 58  PLQSSIKLAFSRRSEMG 74


Top