BLASTX nr result
ID: Akebia22_contig00008221
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia22_contig00008221
(1405 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI40152.3| unnamed protein product [Vitis vinifera] 271 4e-70
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub... 271 4e-70
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub... 265 4e-68
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 265 4e-68
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr... 252 2e-64
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu... 252 2e-64
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub... 249 3e-63
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put... 246 2e-62
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub... 245 4e-62
ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prun... 240 1e-60
gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus no... 236 2e-59
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub... 234 5e-59
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V sub... 228 5e-57
ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phas... 228 6e-57
gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus... 223 1e-55
ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|3555218... 221 8e-55
ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag... 221 8e-55
ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub... 213 1e-52
ref|XP_006293553.1| hypothetical protein CARUB_v10022497mg [Caps... 213 2e-52
gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac... 213 2e-52
>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
Length = 1890
Score = 271 bits (694), Expect = 4e-70
Identities = 153/330 (46%), Positives = 201/330 (60%), Gaps = 13/330 (3%)
Frame = +3
Query: 3 QWPS-QSSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPSEESPRYGGWNINESQ 179
Q PS Q DP+ +W + K N+ W +SP GWN E Q
Sbjct: 1581 QSPSEQQRDPAIKSWSSSHNVMKEQSNQPASTHGW-----------DSPGAKGWNDVEEQ 1629
Query: 180 KRPQVEEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSEE---SPSYGGWNIR 350
+ W + G+ +Q++ + WG E + PS + SP+ G +
Sbjct: 1630 SQ---------WNQRGS----AVKNDQSESSHGWGPSNEQNQLPSSQGWGSPNAGAGHES 1676
Query: 351 KSEKRPCDAWGQRDGE----EGTGGWNKSEGKSQSSNAGDWKIKKGRAAMSPGKFDDRND 518
+++ + WGQ G+ EG+ GW SN +WK KK R G +D D
Sbjct: 1677 ETQSQ----WGQPSGKKSRPEGSRGWG--------SNNTEWKNKKNRPNKPQGPLND--D 1722
Query: 519 WSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLD 698
+SA GIFTATRQR+D FTSEEQ+IL DVEPI+QSI+RIMHQ+ YNDGDPL+ADDQSY+LD
Sbjct: 1723 YSAGGIFTATRQRVDIFTSEEQDILLDVEPIMQSIRRIMHQAGYNDGDPLSADDQSYILD 1782
Query: 699 HVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKY 878
VFN HPDK KMG+G++YVMV++HSSF ++RCFY+VSTDGH+EDFSYRKC+ENFIK+KY
Sbjct: 1783 KVFNNHPDKAVKMGTGIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKY 1842
Query: 879 PGMAESFIKKYFRKPRSG-----NPAPEEG 953
P AE+FI KYFR+PR+G + PE+G
Sbjct: 1843 PDNAETFIGKYFRRPRAGGNRERSVIPEDG 1872
>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
Length = 1830
Score = 271 bits (694), Expect = 4e-70
Identities = 153/330 (46%), Positives = 201/330 (60%), Gaps = 13/330 (3%)
Frame = +3
Query: 3 QWPS-QSSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPSEESPRYGGWNINESQ 179
Q PS Q DP+ +W + K N+ W +SP GWN E Q
Sbjct: 1521 QSPSEQQRDPAIKSWSSSHNVMKEQSNQPASTHGW-----------DSPGAKGWNDVEEQ 1569
Query: 180 KRPQVEEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSEE---SPSYGGWNIR 350
+ W + G+ +Q++ + WG E + PS + SP+ G +
Sbjct: 1570 SQ---------WNQRGS----AVKNDQSESSHGWGPSNEQNQLPSSQGWGSPNAGAGHES 1616
Query: 351 KSEKRPCDAWGQRDGE----EGTGGWNKSEGKSQSSNAGDWKIKKGRAAMSPGKFDDRND 518
+++ + WGQ G+ EG+ GW SN +WK KK R G +D D
Sbjct: 1617 ETQSQ----WGQPSGKKSRPEGSRGWG--------SNNTEWKNKKNRPNKPQGPLND--D 1662
Query: 519 WSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLD 698
+SA GIFTATRQR+D FTSEEQ+IL DVEPI+QSI+RIMHQ+ YNDGDPL+ADDQSY+LD
Sbjct: 1663 YSAGGIFTATRQRVDIFTSEEQDILLDVEPIMQSIRRIMHQAGYNDGDPLSADDQSYILD 1722
Query: 699 HVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKY 878
VFN HPDK KMG+G++YVMV++HSSF ++RCFY+VSTDGH+EDFSYRKC+ENFIK+KY
Sbjct: 1723 KVFNNHPDKAVKMGTGIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKY 1782
Query: 879 PGMAESFIKKYFRKPRSG-----NPAPEEG 953
P AE+FI KYFR+PR+G + PE+G
Sbjct: 1783 PDNAETFIGKYFRRPRAGGNRERSVIPEDG 1812
>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
sativus]
Length = 1959
Score = 265 bits (677), Expect = 4e-68
Identities = 146/344 (42%), Positives = 200/344 (58%), Gaps = 30/344 (8%)
Frame = +3
Query: 9 PSQSSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPSEESPRYGGWNINESQKRP 188
P S D WG D + + +S W + +E S +G + QK
Sbjct: 1597 PEASQGFGNDAWGQQKSRDVIKPSLANNESNLSGWGSQIESNEGSD-HGFDQVTNEQKSS 1655
Query: 189 QV------EEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSEESPSYG----- 335
E+ + W + + EA + G+QND WGQ + + + S ES
Sbjct: 1656 DTRGWDSQEKTDKPWDKQKSLEASQSWGSQNDSLGSWGQPQRASEECSRESQDDSSTQFS 1715
Query: 336 ---------GWNIRKSEKRPCDAWGQ-RDGEEGTG--GWNKSE--GKSQSSNAGDWKIKK 473
GW +KS + WG ++ E T GW+K K NAG+WK +K
Sbjct: 1716 QLKPPETSLGWEQQKSPE-VSHGWGSHKESSEQTSSHGWDKKNQGSKGWGGNAGEWKNRK 1774
Query: 474 GRAAMSPGKFDDRNDWSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYN 653
R SPG +D D + ++TA+ QRLD FTSEEQ+IL+D+EPI+QSI+++MHQS YN
Sbjct: 1775 NRPPKSPGMSND--DANLRALYTASGQRLDMFTSEEQDILADIEPIMQSIRKVMHQSGYN 1832
Query: 654 DGDPLTADDQSYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHRED 833
DGDPL+A+DQS+VL VFN+HPDK KMG+G+++ MV++HSSFQ++RCFY+V+TDGH+ED
Sbjct: 1833 DGDPLSAEDQSFVLQSVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCFYVVTTDGHKED 1892
Query: 834 FSYRKCMENFIKDKYPGMAESFIKKYFRKPRSG-----NPAPEE 950
FSYRKC++NFIK KYP +AE F+ KYFRKPR NPA EE
Sbjct: 1893 FSYRKCLDNFIKGKYPDLAEMFVAKYFRKPRPNRNRDRNPASEE 1936
>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
1-like [Cucumis sativus]
Length = 2019
Score = 265 bits (677), Expect = 4e-68
Identities = 146/344 (42%), Positives = 200/344 (58%), Gaps = 30/344 (8%)
Frame = +3
Query: 9 PSQSSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPSEESPRYGGWNINESQKRP 188
P S D WG D + + +S W + +E S +G + QK
Sbjct: 1657 PEASQGFGNDAWGQQKSRDVIKPSLANNESNLSGWGSQIESNEGSD-HGFDQVTNEQKSS 1715
Query: 189 QV------EEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSEESPSYG----- 335
E+ + W + + EA + G+QND WGQ + + + S ES
Sbjct: 1716 DTRGWDSQEKTDKPWDKQKSLEASQSWGSQNDSLGSWGQPQRASEECSRESQDDSSTQFS 1775
Query: 336 ---------GWNIRKSEKRPCDAWGQ-RDGEEGTG--GWNKSE--GKSQSSNAGDWKIKK 473
GW +KS + WG ++ E T GW+K K NAG+WK +K
Sbjct: 1776 QLKPPETSLGWEQQKSPE-VSHGWGSNKESSEQTSSHGWDKKNQGSKGWGGNAGEWKNRK 1834
Query: 474 GRAAMSPGKFDDRNDWSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYN 653
R SPG +D D + ++TA+ QRLD FTSEEQ+IL+D+EPI+QSI+++MHQS YN
Sbjct: 1835 NRPPKSPGMSND--DANLRALYTASGQRLDMFTSEEQDILADIEPIMQSIRKVMHQSGYN 1892
Query: 654 DGDPLTADDQSYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHRED 833
DGDPL+A+DQS+VL VFN+HPDK KMG+G+++ MV++HSSFQ++RCFY+V+TDGH+ED
Sbjct: 1893 DGDPLSAEDQSFVLQSVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCFYVVTTDGHKED 1952
Query: 834 FSYRKCMENFIKDKYPGMAESFIKKYFRKPRSG-----NPAPEE 950
FSYRKC++NFIK KYP +AE F+ KYFRKPR NPA EE
Sbjct: 1953 FSYRKCLDNFIKGKYPDLAEMFVAKYFRKPRPNRNRDRNPASEE 1996
>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
gi|557522591|gb|ESR33958.1| hypothetical protein
CICLE_v10004129mg [Citrus clementina]
Length = 1867
Score = 252 bits (644), Expect = 2e-64
Identities = 140/329 (42%), Positives = 195/329 (59%), Gaps = 25/329 (7%)
Frame = +3
Query: 39 TWGTLA--EADKTGQNKNDGKSQWGQ--------WKDSAKPSEESP----RYGGWNINES 176
+W T A + D G + S WG W+DS+KPS + GGWN+ ++
Sbjct: 1553 SWNTKALDKLDDVGSAVENSSSVWGAREDFSTKGWEDSSKPSANEKSIVHQIGGWNVPDA 1612
Query: 177 QKRPQVEEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSEESP-SYGGWNIRK 353
+ +WG+ +T + + WG ++ HT+ P S W++
Sbjct: 1613 KGTDD-----SSWGKQ-----KLTENAKGTDDSSWG--KQKHTENESSQPASSNAWDLPD 1660
Query: 354 S---EKRPCDAWGQRDGEEGTGGWNKSEGKSQSSNAGDWKIKKGRAAMSPGKFDDRNDWS 524
+ + WGQ E + K+ G + SS G+WK KK R SPG +D D +
Sbjct: 1661 ATGGSETEMQVWGQSRKEP----FKKNRGWASSS--GEWKGKKNRPPRSPGVVND--DST 1712
Query: 525 ASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDHV 704
+ ++T TRQRLD FTSEEQ+ILSDVEPI++SI+RIMHQS YNDGD L+ADD+S++ D+V
Sbjct: 1713 VNAMYTVTRQRLDMFTSEEQDILSDVEPIMRSIRRIMHQSGYNDGDRLSADDKSFIFDNV 1772
Query: 705 FNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPG 884
FNYHPDK KMG+G+++ V+KH SFQD+RC ++VSTDG ++DFSYRKC+E+FI+ KYP
Sbjct: 1773 FNYHPDKAMKMGAGIDHFKVDKHGSFQDSRCLFVVSTDGSQQDFSYRKCLESFIRGKYPE 1832
Query: 885 MAESFIKKYFRKPRSGN-------PAPEE 950
+ FI KYFR+PRSG P PEE
Sbjct: 1833 FVDEFIGKYFRRPRSGGNREPSLPPVPEE 1861
>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
gi|550343552|gb|EEE78905.2| hypothetical protein
POPTR_0003s19630g [Populus trichocarpa]
Length = 1920
Score = 252 bits (644), Expect = 2e-64
Identities = 150/332 (45%), Positives = 193/332 (58%), Gaps = 18/332 (5%)
Frame = +3
Query: 6 WPSQSSDPSADTWGTLAEADKTGQNKNDGKSQ-WGQWKDSAKPSEE--SPRYGGWN---I 167
W ++ + ADT A G+ K+ SQ WG K+S K E P G N
Sbjct: 1600 WGNKVTSNQADT------ASGWGKPKSSENSQGWGLSKESGKEVHEWGVPNSAGGNGSET 1653
Query: 168 NESQKRPQVEEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSEESPSYGGWNI 347
N + + + E G+ G ++ G G P+ E P E + GW +
Sbjct: 1654 NNNNENQSLVEQGKESGWDNKASSNQEGTASGWGKPKSPALSEGWGSPREPVKAVHGWGV 1713
Query: 348 RKSE----KRPCDAWGQRDGE------EGTGGWNKSEGKSQSSNAGDWKIKKGRAAMSPG 497
S WGQ+ E EG+ GW SN GDWK K+ R P
Sbjct: 1714 PNSGGGNGSGRDQQWGQQSREFKKDRFEGSRGWG--------SNNGDWKNKRNR----PS 1761
Query: 498 KFDDRNDWSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTAD 677
K D +ASGIFT TRQRLD FTS+EQ+ILSD+EP++ SI+RIMHQ+ YNDGDPL+AD
Sbjct: 1762 K--PHEDLNASGIFTTTRQRLDVFTSQEQDILSDIEPLMLSIRRIMHQTGYNDGDPLSAD 1819
Query: 678 DQSYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCME 857
DQSYVLD+VF+YHPDK KMG+G+++V V++HS+FQ++RCFYIVSTDG ++DFSYRKC+E
Sbjct: 1820 DQSYVLDNVFHYHPDKAVKMGAGIDHVTVSRHSNFQESRCFYIVSTDGCKQDFSYRKCLE 1879
Query: 858 NFIKDKYPGMAESFIKKYF--RKPRSGNPAPE 947
NFIK KYP +A+ FI KYF R R PAPE
Sbjct: 1880 NFIKGKYPDLADEFIAKYFARRGNRQRTPAPE 1911
>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
sinensis]
Length = 1865
Score = 249 bits (635), Expect = 3e-63
Identities = 139/329 (42%), Positives = 194/329 (58%), Gaps = 25/329 (7%)
Frame = +3
Query: 39 TWGTLA--EADKTGQNKNDGKSQWGQ--------WKDSAKPSEESP----RYGGWNINES 176
+W T A + D G + S WG W+DS+KPS + GGWN+ ++
Sbjct: 1551 SWKTKALDKLDDVGSAVENSSSVWGAREDFSTKGWEDSSKPSANEKSIVHQIGGWNVPDA 1610
Query: 177 QKRPQVEEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSEESP-SYGGWNIRK 353
+ WG+ +T + + WG ++ HT+ P S W++
Sbjct: 1611 KGTDD-----SCWGKQ-----KLTENAKGTDDSSWG--KQKHTENESPQPASSNAWDLPD 1658
Query: 354 S---EKRPCDAWGQRDGEEGTGGWNKSEGKSQSSNAGDWKIKKGRAAMSPGKFDDRNDWS 524
+ + WGQ E + K+ G + SS G+WK KK R SPG +D D +
Sbjct: 1659 ATGGSETEMQVWGQSRKEP----FKKNRGWASSS--GEWKGKKNRPPRSPGVVND--DST 1710
Query: 525 ASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDHV 704
+ ++T TRQRLD FTSEEQ+ILS VEPI++SI+RIMHQS YNDGD L+ADD+S++ D+V
Sbjct: 1711 VNAMYTVTRQRLDMFTSEEQDILSHVEPIMRSIRRIMHQSGYNDGDRLSADDKSFIFDNV 1770
Query: 705 FNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPG 884
FNYHPDK KMG+G+++ V+KH SFQD+RC ++VSTDG ++DFSYRKC+E+FI+ KYP
Sbjct: 1771 FNYHPDKAMKMGAGIDHFKVDKHGSFQDSRCLFVVSTDGSQQDFSYRKCLESFIRGKYPD 1830
Query: 885 MAESFIKKYFRKPRSGN-------PAPEE 950
+ + FI KYFR+PRSG P PEE
Sbjct: 1831 LVDEFIGKYFRRPRSGGNREPSLPPVPEE 1859
>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
[Theobroma cacao] gi|590569189|ref|XP_007011000.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao]
Length = 1788
Score = 246 bits (627), Expect = 2e-62
Identities = 139/319 (43%), Positives = 185/319 (57%), Gaps = 39/319 (12%)
Frame = +3
Query: 93 KSQWGQW-KDSAKPSEESPRYGGWNINESQK---------------------RPQVEEPG 206
+++WG W K +K + SP+ G +NE K + + G
Sbjct: 1456 ETEWGDWGKGKSKTQDVSPKVDGTCVNEQTKLSDWGLKKNDTQDVSMEEKTFKSNGADTG 1515
Query: 207 ETWGRHGTEEADVTGGNQNDGNPQ--WGQWRESHTKPSEESPSYGGWNIRKSEKRPCDAW 380
+WG G E + ND P WG TK ++S GW +KS + W
Sbjct: 1516 TSWGTMGKESEKP---DANDALPWSGWGTQDVIPTKTLDDSSKSSGWEQQKSPECS-QGW 1571
Query: 381 GQRDGEE---GTGGWNKSEG--KSQSSNAGDWKIKKG--RAAMSPGKFDD--------RN 515
G D + GW+ G +QS W +G R A K + +
Sbjct: 1572 GSLDESNQPASSNGWDTPNGLGSTQSEKQHQWGQSRGSRRWASDASKKNHPVKSARVMND 1631
Query: 516 DWSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVL 695
D S + ++TATRQRLD FTSEEQ+ILSDVEP++QSI++IMHQS YNDGDPL+A DQS++L
Sbjct: 1632 DSSMAAMYTATRQRLDMFTSEEQDILSDVEPLMQSIRKIMHQSGYNDGDPLSALDQSFIL 1691
Query: 696 DHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDK 875
++VF +HPDK KMG+GV+YVMV+KHS+F D+RCFY+VSTDG ++DFSYRKC++NFIK K
Sbjct: 1692 ENVFTHHPDKAIKMGAGVDYVMVSKHSNFPDSRCFYVVSTDGRKQDFSYRKCLDNFIKGK 1751
Query: 876 YPGMAESFIKKYFRKPRSG 932
YP MA+ FI KYFRKPR G
Sbjct: 1752 YPDMADVFIAKYFRKPRFG 1770
>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1991
Score = 245 bits (625), Expect = 4e-62
Identities = 137/321 (42%), Positives = 188/321 (58%), Gaps = 10/321 (3%)
Frame = +3
Query: 6 WPSQSS-DPSADTWGTLAEADKT----GQNKNDGKSQ--WGQWKDSAKPSEESPRYGGWN 164
W Q S D S TW A+ + GQ K+ SQ WG K ++ S+ G W
Sbjct: 1671 WERQKSPDTSKGTWEQPKSAEMSHGAWGQQKSPDVSQGVWGLEKPASTNSQ-----GSWG 1725
Query: 165 INESQKRPQVEEPGETWGRHGTEE-ADVTGGNQNDGNPQWGQWRESHTKPSEESPSYGGW 341
QK P++ P WG+ + + + T G Q G W + + + + W
Sbjct: 1726 ---QQKSPEI--PQGNWGQQTSPDISQGTWGQQKSPEMSQGSWGQQKPSDTSQPATVNQW 1780
Query: 342 NIRKSEKRPCDAWGQRDGEEGTGGWNK--SEGKSQSSNAGDWKIKKGRAAMSPGKFDDRN 515
+ S+ Q+ G G K G+S NAG+WK K R A SPG +D
Sbjct: 1781 D---SQSEAAVERHQQWGHNGDSNKRKRFEGGRSWGPNAGEWKGKNSRPAKSPGMVND-- 1835
Query: 516 DWSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVL 695
D S + I+TATRQRLD FTSEEQ++LS +EP + SI+RIMHQS YNDGD L+A+D S++L
Sbjct: 1836 DSSVAAIYTATRQRLDIFTSEEQDVLSHIEPTMLSIRRIMHQSGYNDGDQLSAEDHSFIL 1895
Query: 696 DHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDK 875
D VFN+HP+K KMGSG++Y V++H SFQ++RC +++STDG +EDFSYRKC++N IK+K
Sbjct: 1896 DKVFNFHPEKEAKMGSGIDYFTVDRHGSFQESRCLFVISTDGRKEDFSYRKCLQNMIKEK 1955
Query: 876 YPGMAESFIKKYFRKPRSGNP 938
YP +AE+F KYF +PR NP
Sbjct: 1956 YPELAEAFNDKYFSRPRPRNP 1976
>ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
gi|462415343|gb|EMJ20080.1| hypothetical protein
PRUPE_ppa000088mg [Prunus persica]
Length = 1855
Score = 240 bits (612), Expect = 1e-60
Identities = 134/321 (41%), Positives = 186/321 (57%), Gaps = 14/321 (4%)
Frame = +3
Query: 18 SSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPSEESPRYGGWNINESQ------ 179
+ + + TWGT ++ + G S K S W N ++
Sbjct: 1523 AKENTTSTWGTTTASENDWCGRGVGHDDSASL--SGKKSSVLNTSSVWATNTAREDATSA 1580
Query: 180 --KRPQVEEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSEESPSYGGWNIRK 353
K P E TWG E D G P Q TKP ++S S GW+
Sbjct: 1581 WGKNPAKENTTSTWGTTTASENDWCGREAGKVEPVDLQ----PTKPQDDSASLSGWDSPT 1636
Query: 354 SEKRPCDA---WGQRDGEEGTGGWNKSEG-KSQSSNAGDWKIKKGRAAMSPGKFDDRNDW 521
+ + WGQ G++ N+ EG ++ S+ G+WK K R SPG +D +
Sbjct: 1637 GDGNSGERNHQWGQHRGDQTKK--NRFEGARNWVSSPGEWK-NKNRPPKSPGMVNDNSTM 1693
Query: 522 SASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDH 701
A ++T TRQRLD FTSEEQ++LS++EP+++S++RIMHQS YNDGDPL+ DDQS+VLD+
Sbjct: 1694 GA--LYTVTRQRLDMFTSEEQDVLSNIEPVMRSLRRIMHQSGYNDGDPLSGDDQSFVLDN 1751
Query: 702 VFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYP 881
VFNYHPDK KMG G++++ VN+H SFQD+RCF++VSTDG EDFSYRKC++N+I++K+P
Sbjct: 1752 VFNYHPDKAAKMGCGIDHLTVNRHGSFQDSRCFFVVSTDGRTEDFSYRKCLDNYIREKFP 1811
Query: 882 GMAESFIKKYF--RKPRSGNP 938
+AE+FI KYF R R NP
Sbjct: 1812 DLAETFIGKYFSRRGNRERNP 1832
>gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
Length = 2054
Score = 236 bits (601), Expect = 2e-59
Identities = 139/361 (38%), Positives = 198/361 (54%), Gaps = 51/361 (14%)
Frame = +3
Query: 3 QWPSQSSDPS---ADTWGTLAEADKTGQNKNDGKSQWGQWKD---------SAKPSEESP 146
+W SD + + W T ++ KT K+ W W S K ++ P
Sbjct: 1664 RWSKADSDNTHAKSTDWNTTSDRTKTMT-----KNTWSGWHGEKSEKEDILSTKSQQDLP 1718
Query: 147 RYGGWN---------------INESQKRP-QVEEPGETWGRHGTEEADVTGGNQNDGNPQ 278
R W +++ Q P QV EP + W T + V+G ++
Sbjct: 1719 RNSDWGAVSNRENNAERAYEFVSKDQPLPDQVSEPCD-WDNKLTPQKAVSGWLSSNDEGW 1777
Query: 279 WGQWRESHTKPSEESPS-YGGWNIRKS-------EKRPCDAWGQRDGEEG---------- 404
S K +SP Y W R S E ++W R G+ G
Sbjct: 1778 TKDANSSERKEPTDSPVVYNSWEKRTSSEISQNVESASFNSWLPRAGDGGEVEKPNEWVK 1837
Query: 405 -TGGWNKSEGKSQS---SNAGDWKIKKGRAAMSPGKFDD-RNDWSASGIFTATRQRLDQF 569
+G + K+ G++ S++GDWKIKK PGKF ND ++ +FT TRQRLD F
Sbjct: 1838 KSGSFKKNHGETSGGWGSDSGDWKIKKNH----PGKFPRMNNDNTSVRLFTETRQRLDLF 1893
Query: 570 TSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDHVFNYHPDKTTKMGSGV 749
TSEEQ+ LS +EP ++SI+RIMH+S YNDGDP+ +DQS+++D+VFNYHPDK KMGSG+
Sbjct: 1894 TSEEQDALSLIEPTMKSIRRIMHKSGYNDGDPIRPEDQSFIIDNVFNYHPDKAAKMGSGI 1953
Query: 750 NYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKPRS 929
+++M+++HSSFQD+RC Y+VSTDG +EDFSYRKC+ N IK ++P +A+ F+ KYFRKP+
Sbjct: 1954 DHLMISRHSSFQDSRCLYVVSTDGRKEDFSYRKCLGNLIKSRFPDVADEFLDKYFRKPKP 2013
Query: 930 G 932
G
Sbjct: 2014 G 2014
>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
Length = 2082
Score = 234 bits (598), Expect = 5e-59
Identities = 130/330 (39%), Positives = 176/330 (53%), Gaps = 28/330 (8%)
Frame = +3
Query: 24 DPSADTWGTLAEADKTGQNKNDGKSQWG------------QWKDSAKPSEESPRYGG--- 158
D D+WG+ DK Q N G WG +W K E P G
Sbjct: 1713 DNVQDSWGSGKRKDKVTQEDNSGSGGWGANRTDLAKSKSSEWSSWGKNKSEIPAGGSENV 1772
Query: 159 ----WNINESQKRPQVEEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSEESP 326
W + + Q E G W R+ E D GG++ PQ W + K +
Sbjct: 1773 QNDSWGSGKLEDDTQKENSGSAWVRNKAETID--GGSEK---PQEDAWNSGNWKAESKVG 1827
Query: 327 SYGGWNIRKSEKRPCDAWGQRDGEEGTGGWNK--SEGKSQSSNAGDW------KIKKGRA 482
+ + SE + D+ Q + + GW + S+S W KK R
Sbjct: 1828 NASWGKPKSSESQAWDSHNQSNQNSSSQGWESHIASANSESEKGFQWGKQGRDSFKKNRF 1887
Query: 483 AMSPGKFDDRNDW-SASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDG 659
S G+ + DW + + A QRLD ++S EQ++L D+EPI+QSI+RIM Q YNDG
Sbjct: 1888 EGSQGRGSNAGDWKNRNRPPRAPGQRLDIYSSGEQDVLKDIEPIMQSIRRIMQQQGYNDG 1947
Query: 660 DPLTADDQSYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFS 839
DPL A+DQ +VL++VF +HPDK TKMG+G++YVMVNKHSSFQ++RCFY+V DG +DFS
Sbjct: 1948 DPLAAEDQLFVLENVFEHHPDKETKMGTGIDYVMVNKHSSFQESRCFYVVCKDGESKDFS 2007
Query: 840 YRKCMENFIKDKYPGMAESFIKKYFRKPRS 929
YRKC+ N+I KYP +AESF+ KYFRKPR+
Sbjct: 2008 YRKCLANYISKKYPDLAESFLGKYFRKPRA 2037
>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
Length = 2020
Score = 228 bits (581), Expect = 5e-57
Identities = 128/332 (38%), Positives = 178/332 (53%), Gaps = 35/332 (10%)
Frame = +3
Query: 39 TWGTLAEADKTGQNKNDGKSQWG------------QWKDSAKPSEESPRYGGWNI----- 167
+WG+ DK Q N G WG +W K E P G N+
Sbjct: 1668 SWGSGKRKDKVTQEDNSGSGDWGANRTDLAITKSSEWSSWGKNKTEIPAGGSANVQNDSW 1727
Query: 168 -----NESQKRPQV-----EEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSE 317
N++QK E G W R+ E D GG++ PQ W + K
Sbjct: 1728 GLGKLNDTQKDNSGCGAWGENSGSAWVRNKAETID--GGSEK---PQEDAWNSGNWKAES 1782
Query: 318 ESPSYGGWNIRKSEKRPCDAWGQRDGEEGTGGWNKSEGKSQSSNAGDWKIKKGRAAMSPG 497
+ + + SE D+ Q + + GW + S N ++ KGR +
Sbjct: 1783 KVGNTTWGKPKSSESHAWDSHNQSNQNSSSQGWESHIASANSENEKGFQWGKGRDSFKKN 1842
Query: 498 KFD-------DRNDW-SASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYN 653
+F+ + DW + + A QRLD ++SEEQ++L D+EPI+QSI+RIM Q Y+
Sbjct: 1843 RFEGSQGRGSNAGDWKNRNRPPRAPGQRLDIYSSEEQDVLKDIEPIMQSIRRIMQQQGYS 1902
Query: 654 DGDPLTADDQSYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHRED 833
DGDPL A+DQ +VL++VF +HPDK TKMG+G++YVMVNKHSSFQ++RCFY+V DG +D
Sbjct: 1903 DGDPLAAEDQLFVLENVFEHHPDKETKMGAGIDYVMVNKHSSFQESRCFYVVCKDGQSKD 1962
Query: 834 FSYRKCMENFIKDKYPGMAESFIKKYFRKPRS 929
FSYRKC+ N+I KYP +AESF+ KYFRKPR+
Sbjct: 1963 FSYRKCLANYISKKYPDLAESFLGKYFRKPRA 1994
>ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phaseolus vulgaris]
gi|561006762|gb|ESW05756.1| hypothetical protein
PHAVU_011G206900g [Phaseolus vulgaris]
Length = 2052
Score = 228 bits (580), Expect = 6e-57
Identities = 134/353 (37%), Positives = 192/353 (54%), Gaps = 46/353 (13%)
Frame = +3
Query: 9 PSQSSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPSEESPRYGGWNINESQKRP 188
P+ S+ D+WG+ D T + + S G KD + S + GW N+S+
Sbjct: 1669 PAGGSENVQDSWGSGTRKDVTQVDTSVSGSWGGSRKDQTNTT--SNEWAGWGRNKSEIPA 1726
Query: 189 ----QVEEPGETWGRHGTEEADVTGGNQNDGNPQWG------------QWRESHTKPSE- 317
V+E ++WG G + DVT N G+ WG +W + + ++
Sbjct: 1727 GGCETVQE--DSWGS-GKLKDDVTQ-KDNSGSGAWGANKTGLTKTEVDEWARNKVETADG 1782
Query: 318 -----ESPSYGGWNIRKSEKRPCDAWGQRDGEEGTGGWNKSEGKSQSSNAGDWK------ 464
+ S+ N++ K +WG + G+ W+ +Q+S++ W+
Sbjct: 1783 GSEKLQEDSWNSGNLKSESKVGNASWG-KPNSSGSQSWDSHNQSNQNSSSRGWESHIASA 1841
Query: 465 -----------------IKKGRAAMSPGKFDDRNDWSASGIFTATR-QRLDQFTSEEQNI 590
KK R S G+ + DW T QRLD ++SEEQ++
Sbjct: 1842 NSDSEKGFQWGKQGRESFKKNRFEGSQGRGSNSGDWKNRNRPPRTPGQRLDLYSSEEQDV 1901
Query: 591 LSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDHVFNYHPDKTTKMGSGVNYVMVNK 770
L ++EPI+QSI+RIM Q YNDGDPL ADDQ +VL++VF +HPDK TKMG+G++YVMVNK
Sbjct: 1902 LKEIEPIMQSIRRIMQQQGYNDGDPLAADDQLFVLENVFEHHPDKDTKMGAGIDYVMVNK 1961
Query: 771 HSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKPRS 929
HSSFQD+RCFY+V DG REDFSYRKC++N+I+ KYP +AESF KYFRKPR+
Sbjct: 1962 HSSFQDSRCFYVVLKDGRREDFSYRKCLDNWIRKKYPELAESFFGKYFRKPRN 2014
>gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus guttatus]
Length = 2113
Score = 223 bits (569), Expect = 1e-55
Identities = 135/343 (39%), Positives = 190/343 (55%), Gaps = 38/343 (11%)
Frame = +3
Query: 12 SQSSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAK----PSEESPRYGGWNINESQ 179
S + TWG + KT Q +N KS WG D+A PS +S G W+ +
Sbjct: 1719 SSAQKGEQSTWGHV----KTSQTQN--KSTWGG--DTAPIENVPSPKSQEDGLWSSASAA 1770
Query: 180 KRPQV-----------------EEPGETWGRHGT----EEADVTGGNQNDGNPQWGQWRE 296
++ Q EP TWG + TG N + +P W
Sbjct: 1771 QKEQDGSKDNNPWQTKVAEQANSEPLSTWGSSSDWVKPDSQTPTGDNTKNESP----WSS 1826
Query: 297 SHTKPSEESPSYGGWNIRK------SEKRPCDAWGQRDGEEGTGGWNKSEGKSQSSNAG- 455
S K +S GW K ++++P WG+ G GW + G+ + + G
Sbjct: 1827 SQ-KLLNDSTDSQGWGSSKVDTANDNDEQP--QWGRGRGRGRGRGWGRGVGRGREGSQGR 1883
Query: 456 ------DWKIKKGRAAMSPGKFDDRNDWSASGIFTATRQRLDQFTSEEQNILSDVEPILQ 617
DWK K+ S G DD N A GIFTA+RQRLD FT+EEQ +L + E I++
Sbjct: 1884 GPTNDRDWKNKR-----SGGPVDDPN---APGIFTASRQRLDSFTAEEQEVLLETETIMK 1935
Query: 618 SIKRIMHQSRYNDGDPLTADDQSYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRC 797
+I+R+MHQ+ YNDGDPL+ADDQ Y++D+V N+HP+K+ K+G+G++++MVNKHS FQ +RC
Sbjct: 1936 NIRRVMHQTGYNDGDPLSADDQKYIVDNVLNHHPEKSLKIGAGLDHIMVNKHSEFQMSRC 1995
Query: 798 FYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKPR 926
Y V+ DG + DFSYRKC++NFI+ KYP +AESFI KYF+KP+
Sbjct: 1996 LYAVTIDGSKADFSYRKCLDNFIRGKYPDVAESFIAKYFKKPQ 2038
>ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|355521872|gb|AET02326.1| Protein
DCL [Medicago truncatula]
Length = 481
Score = 221 bits (562), Expect = 8e-55
Identities = 132/358 (36%), Positives = 192/358 (53%), Gaps = 45/358 (12%)
Frame = +3
Query: 12 SQSSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPS-EESPRYGGW-----NINE 173
SQ + WG T ND +S WGQ KD E+S R W N+ +
Sbjct: 74 SQKDSQKSSAWGA------TKPKSNDNRSSWGQKKDEIHVMPEDSSRSNAWEQKPENVKD 127
Query: 174 S------------------QKRP--QVEEPGETWGRHGTEEADVTGGNQNDGNPQWGQWR 293
S + RP EP ++G+ ++E + ++N+ + WG+ +
Sbjct: 128 SWVAKVPVANSSWGKAKSPENRPWDSKNEPNNSFGKPNSQENE-PWDSKNESDSSWGKPK 186
Query: 294 ESHTKP-SEESPSYGGWNIRKS-EKRPCDAWGQRDGEEGTGGWNK--SEGKSQSSNAGDW 461
++P ++ S W KS E P D+ + + G+ GW+ + S+S + W
Sbjct: 187 SQESQPWDSKNESNSSWGKPKSQENHPWDSKNESNQTAGSRGWDSQVASANSESDKSFQW 246
Query: 462 KIKKGRAAMSPGKFD-------DRNDW-SASGIFTATRQRLDQFTSEEQNILSDVEPILQ 617
K+GR + +F+ + DW + S QR + +T EEQ+I+ D+EPI+Q
Sbjct: 247 G-KQGRDSFKKNRFEGSQSGGPNAGDWKNRSRPVRPPGQRFELYTPEEQDIMKDIEPIVQ 305
Query: 618 SIKRIMHQSRYNDGDPLTADDQSYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRC 797
SI+RIM YNDGDPL +DQ YVL++VF +HPDK TKMG GV++VMV+KHS+FQD+RC
Sbjct: 306 SIRRIMQLQGYNDGDPLANEDQKYVLENVFEHHPDKETKMGVGVDHVMVSKHSNFQDSRC 365
Query: 798 FYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKP-------RSGNPAPEE 950
Y+V DG +EDFSYRKC+EN ++ KYP AESF KYFRKP ++ NPA E+
Sbjct: 366 LYVVLKDGKKEDFSYRKCLENLVRKKYPETAESFCGKYFRKPQPRVKRDQTPNPAGEQ 423
>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
subunit [Medicago truncatula]
Length = 2032
Score = 221 bits (562), Expect = 8e-55
Identities = 132/358 (36%), Positives = 192/358 (53%), Gaps = 45/358 (12%)
Frame = +3
Query: 12 SQSSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPS-EESPRYGGW-----NINE 173
SQ + WG T ND +S WGQ KD E+S R W N+ +
Sbjct: 1625 SQKDSQKSSAWGA------TKPKSNDNRSSWGQKKDEIHVMPEDSSRSNAWEQKPENVKD 1678
Query: 174 S------------------QKRP--QVEEPGETWGRHGTEEADVTGGNQNDGNPQWGQWR 293
S + RP EP ++G+ ++E + ++N+ + WG+ +
Sbjct: 1679 SWVAKVPVANSSWGKAKSPENRPWDSKNEPNNSFGKPNSQENE-PWDSKNESDSSWGKPK 1737
Query: 294 ESHTKP-SEESPSYGGWNIRKS-EKRPCDAWGQRDGEEGTGGWNK--SEGKSQSSNAGDW 461
++P ++ S W KS E P D+ + + G+ GW+ + S+S + W
Sbjct: 1738 SQESQPWDSKNESNSSWGKPKSQENHPWDSKNESNQTAGSRGWDSQVASANSESDKSFQW 1797
Query: 462 KIKKGRAAMSPGKFD-------DRNDW-SASGIFTATRQRLDQFTSEEQNILSDVEPILQ 617
K+GR + +F+ + DW + S QR + +T EEQ+I+ D+EPI+Q
Sbjct: 1798 G-KQGRDSFKKNRFEGSQSGGPNAGDWKNRSRPVRPPGQRFELYTPEEQDIMKDIEPIVQ 1856
Query: 618 SIKRIMHQSRYNDGDPLTADDQSYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRC 797
SI+RIM YNDGDPL +DQ YVL++VF +HPDK TKMG GV++VMV+KHS+FQD+RC
Sbjct: 1857 SIRRIMQLQGYNDGDPLANEDQKYVLENVFEHHPDKETKMGVGVDHVMVSKHSNFQDSRC 1916
Query: 798 FYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKP-------RSGNPAPEE 950
Y+V DG +EDFSYRKC+EN ++ KYP AESF KYFRKP ++ NPA E+
Sbjct: 1917 LYVVLKDGKKEDFSYRKCLENLVRKKYPETAESFCGKYFRKPQPRVKRDQTPNPAGEQ 1974
>ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer
arietinum]
Length = 2263
Score = 213 bits (543), Expect = 1e-52
Identities = 128/329 (38%), Positives = 172/329 (52%), Gaps = 29/329 (8%)
Frame = +3
Query: 27 PSADTWGTLAEADKTGQNKNDGKSQWGQWKD------SAKPSEESPRYGGWNINESQKRP 188
P +WG +A K K++ S WG+ KD S K E+S G
Sbjct: 1896 PKMGSWGATKDATKP---KSNDWSSWGKKKDEIHDGGSEKIQEDSWSSGKRKAESKSVAD 1952
Query: 189 QVEEPGE---TWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKP------SEESPSYGGW 341
++E TW + D N WG+ + +P S + S GW
Sbjct: 1953 VMQEDSSKSNTWEHKSDDVKDSWDAKVPVANSSWGKPKSQENQPWDSKNESNPTASSRGW 2012
Query: 342 NIR----KSEKRPCDAWGQR----------DGEEGTGGWNKSEGKSQSSNAGDWKIKKGR 479
+ + S+ WG+ +G +G+ GW SNAGDWK K R
Sbjct: 2013 DSQVASANSDSDKNFQWGKPGRESFKKNRFEGSQGSQGWG--------SNAGDWK-NKNR 2063
Query: 480 AAMSPGKFDDRNDWSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDG 659
A PG RLD ++SEEQ+IL D+EPI+QSI+RIM Q YNDG
Sbjct: 2064 PARPPGP------------------RLDLYSSEEQDILKDIEPIVQSIRRIMQQQGYNDG 2105
Query: 660 DPLTADDQSYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFS 839
DPL A+DQ YVL++VF +HPDK TKMG G+++VMV++HS+FQ++RCFY+V DG +EDFS
Sbjct: 2106 DPLAAEDQQYVLENVFEHHPDKETKMGVGIDHVMVSRHSNFQESRCFYVVLKDGKKEDFS 2165
Query: 840 YRKCMENFIKDKYPGMAESFIKKYFRKPR 926
YRKC+E+F++ KY AESF KYFRKPR
Sbjct: 2166 YRKCLESFVRKKYADTAESFCGKYFRKPR 2194
>ref|XP_006293553.1| hypothetical protein CARUB_v10022497mg [Capsella rubella]
gi|482562261|gb|EOA26451.1| hypothetical protein
CARUB_v10022497mg [Capsella rubella]
Length = 1959
Score = 213 bits (542), Expect = 2e-52
Identities = 120/311 (38%), Positives = 179/311 (57%), Gaps = 5/311 (1%)
Frame = +3
Query: 18 SSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPSEESPRYGGWNINESQKRPQVE 197
+S+PSA WG+ K G + WG W K SE GW N + + E
Sbjct: 1571 NSEPSA--WGSQG---KKKAETESGPASWGAW--DKKISETESGLAGWG-NGDKINSETE 1622
Query: 198 EPGETWGRHG--TEEADVTGGNQNDGNPQWGQWRESHT--KPSEESPSYGGWNIRKSEKR 365
WG G + A N++DGNP W +E+ + K +E +G ++K
Sbjct: 1623 SGAAAWGSWGQPSPTAADKDTNEDDGNP-WVSLKETKSGEKDEKEKSQWGN----PAKKF 1677
Query: 366 PCDAWGQRDGEEGTGGWNKSEGKSQSSNAGDWKIKKGRAAMSPGKFDDRNDWSASGIFTA 545
P D GGW+ G +W+ K+ P R++ + + +FTA
Sbjct: 1678 PSDG--------SYGGWSNGGG-------AEWRGKRNHTPRPP-----RSEDNLAPMFTA 1717
Query: 546 TRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDHVFNYHPDK 725
T+QRLD FTSEEQ +LSDVEP+++++++IMH S Y DG+P++ DD+++VL+ + N+HP+K
Sbjct: 1718 TKQRLDSFTSEEQELLSDVEPVMRTLRKIMHMSGYPDGEPISDDDKTFVLEKILNFHPEK 1777
Query: 726 TTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIK 905
K+GS V+++ V+KH++F DTRCF++VSTDG ++DFSYRK + N++ KYP AE FI
Sbjct: 1778 ERKLGSAVDFITVDKHTTFTDTRCFFVVSTDGAKQDFSYRKSLNNYLMTKYPDRAEEFID 1837
Query: 906 KYFRKPR-SGN 935
KYF+KPR SGN
Sbjct: 1838 KYFKKPRPSGN 1848
>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
Length = 1902
Score = 213 bits (542), Expect = 2e-52
Identities = 126/330 (38%), Positives = 187/330 (56%), Gaps = 23/330 (6%)
Frame = +3
Query: 24 DPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPSEESPRYGGWNINESQKRPQVE-- 197
D + +WG+ E D+ ND G + AK S W+ + +++ Q
Sbjct: 1556 DGVSSSWGSQKE-DRPQPKSNDRSVGDGNFDKDAKEEGLS----SWDAKKVERKTQSSWG 1610
Query: 198 EPGETWGRHGTEEADVTGG---NQNDGNPQWGQWRESHTKPSEESPSYGGWNIRKSEKRP 368
+P E+ AD G NQ + WG + K SE+ S+G N+ +K
Sbjct: 1611 QPSES-KNSAQSSADHWGSDKSNQPGKSSGWGSEDTNAGKDSEKQDSWGKSNVSTWKKES 1669
Query: 369 CDAWGQRD------GEEGTGGWNKSEGKSQ----SSNAGDWKIKKGRAAMSPGKFDDR-- 512
+ D G+ G GWNK + + SSN G+WK +K + + + +R
Sbjct: 1670 GEKLHGSDDSQSPWGQPGGSGWNKKQPEGGRGWGSSNTGEWKSRKNQN-QNQNQNQNRPP 1728
Query: 513 ---NDWSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQ 683
ND S TATR+R+D+F +EE+++LS+VE ++QSI+RIMHQS DG+PL DDQ
Sbjct: 1729 RGPNDDSPRVALTATRKRMDEFPTEEKDVLSEVESLMQSIRRIMHQSGCVDGEPLLPDDQ 1788
Query: 684 SYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENF 863
+Y++D++ NYHPDK K+G+GV+++ V KHS+FQ++RCFY+VSTDG DFSY KC+E F
Sbjct: 1789 TYLIDNILNYHPDKAAKIGAGVDFITVKKHSNFQESRCFYVVSTDGKDTDFSYIKCIETF 1848
Query: 864 IKDKYPGMAESFIKKYFR---KPRSGNPAP 944
+K KYP +AESF KYFR +P+ +P+P
Sbjct: 1849 VKGKYPSVAESFTSKYFRRSQRPQPASPSP 1878
Score = 75.1 bits (183), Expect = 7e-11
Identities = 58/207 (28%), Positives = 79/207 (38%), Gaps = 39/207 (18%)
Frame = +3
Query: 27 PSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPSEESPRYGGWNINESQKRPQVEEPG 206
PS+ T + D + G S WG KD A P E+S + GGW+ S+++PQ E+
Sbjct: 1117 PSSGTGWNANKIDTGSGSAEGGWSSWGSKKDQANP-EDSSKTGGWSSGGSKQKPQPEDSS 1175
Query: 207 ETWGRHGTEEADVTGGNQNDGNPQWGQ-----------------------WRESHTK--- 308
++ G ++ G NQ D +P WGQ W S K
Sbjct: 1176 KSGGWDASKSWG--GSNQGDPSPVWGQPVKATNDISIENDHGSGSAEGGGWANSGMKKDL 1233
Query: 309 -PSEESPSYGGWNIRKS-----EKRPCDAWGQRDGEEGTGGWNKSEGKS-------QSSN 449
E S + GGW+ KS K P AWG + GW KS+ K +
Sbjct: 1234 SKQENSSTAGGWDASKSWSGSKPKDPSSAWGAGKKTDDNNGWKKSDSKKDLASGSVEDGG 1293
Query: 450 AGDWKIKKGRAAMSPGKFDDRNDWSAS 530
W KK + P N W AS
Sbjct: 1294 CSGWGPKKD--LLQPEDSAGENGWGAS 1318
Score = 63.9 bits (154), Expect = 2e-07
Identities = 52/205 (25%), Positives = 80/205 (39%), Gaps = 27/205 (13%)
Frame = +3
Query: 12 SQSSDPSADTWGTLAEADKTGQNKND---GKSQWGQWKDSA-----KPSEESPRYGGWNI 167
S DPS WG +A +ND G ++ G W +S E S GGW+
Sbjct: 1189 SNQGDPSP-VWGQPVKATNDISIENDHGSGSAEGGGWANSGMKKDLSKQENSSTAGGWDA 1247
Query: 168 NESQKRPQVEEPGETWG-----------RHGTEEADVTGGNQNDGNPQ-WGQWRESHTKP 311
++S + ++P WG + + D+ G+ DG WG ++
Sbjct: 1248 SKSWSGSKPKDPSSAWGAGKKTDDNNGWKKSDSKKDLASGSVEDGGCSGWGPKKD--LLQ 1305
Query: 312 SEESPSYGGWNIRKSE-KRPCDAWGQRDGEEGTGGWNKSEGKSQSSNA------GDWKIK 470
E+S GW KS+ K P AWG+ E GW K+ + S N D K
Sbjct: 1306 PEDSAGENGWGASKSKSKEPSSAWGKPAQETDNIGWKKNNPQRDSENLEGTSGWNDKLQK 1365
Query: 471 KGRAAMSPGKFDDRNDWSASGIFTA 545
+ ++ + DW ++G TA
Sbjct: 1366 ENKSFSKQSQPASSKDWDSTGNITA 1390