BLASTX nr result
ID: Akebia22_contig00008221
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia22_contig00008221 (1405 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI40152.3| unnamed protein product [Vitis vinifera] 271 4e-70 ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub... 271 4e-70 ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub... 265 4e-68 ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 265 4e-68 ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr... 252 2e-64 ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu... 252 2e-64 ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub... 249 3e-63 ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put... 246 2e-62 ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub... 245 4e-62 ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prun... 240 1e-60 gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus no... 236 2e-59 ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub... 234 5e-59 ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V sub... 228 5e-57 ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phas... 228 6e-57 gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus... 223 1e-55 ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|3555218... 221 8e-55 ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag... 221 8e-55 ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub... 213 1e-52 ref|XP_006293553.1| hypothetical protein CARUB_v10022497mg [Caps... 213 2e-52 gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac... 213 2e-52 >emb|CBI40152.3| unnamed protein product [Vitis vinifera] Length = 1890 Score = 271 bits (694), Expect = 4e-70 Identities = 153/330 (46%), Positives = 201/330 (60%), Gaps = 13/330 (3%) Frame = +3 Query: 3 QWPS-QSSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPSEESPRYGGWNINESQ 179 Q PS Q DP+ +W + K N+ W +SP GWN E Q Sbjct: 1581 QSPSEQQRDPAIKSWSSSHNVMKEQSNQPASTHGW-----------DSPGAKGWNDVEEQ 1629 Query: 180 KRPQVEEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSEE---SPSYGGWNIR 350 + W + G+ +Q++ + WG E + PS + SP+ G + Sbjct: 1630 SQ---------WNQRGS----AVKNDQSESSHGWGPSNEQNQLPSSQGWGSPNAGAGHES 1676 Query: 351 KSEKRPCDAWGQRDGE----EGTGGWNKSEGKSQSSNAGDWKIKKGRAAMSPGKFDDRND 518 +++ + WGQ G+ EG+ GW SN +WK KK R G +D D Sbjct: 1677 ETQSQ----WGQPSGKKSRPEGSRGWG--------SNNTEWKNKKNRPNKPQGPLND--D 1722 Query: 519 WSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLD 698 +SA GIFTATRQR+D FTSEEQ+IL DVEPI+QSI+RIMHQ+ YNDGDPL+ADDQSY+LD Sbjct: 1723 YSAGGIFTATRQRVDIFTSEEQDILLDVEPIMQSIRRIMHQAGYNDGDPLSADDQSYILD 1782 Query: 699 HVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKY 878 VFN HPDK KMG+G++YVMV++HSSF ++RCFY+VSTDGH+EDFSYRKC+ENFIK+KY Sbjct: 1783 KVFNNHPDKAVKMGTGIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKY 1842 Query: 879 PGMAESFIKKYFRKPRSG-----NPAPEEG 953 P AE+FI KYFR+PR+G + PE+G Sbjct: 1843 PDNAETFIGKYFRRPRAGGNRERSVIPEDG 1872 >ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera] Length = 1830 Score = 271 bits (694), Expect = 4e-70 Identities = 153/330 (46%), Positives = 201/330 (60%), Gaps = 13/330 (3%) Frame = +3 Query: 3 QWPS-QSSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPSEESPRYGGWNINESQ 179 Q PS Q DP+ +W + K N+ W +SP GWN E Q Sbjct: 1521 QSPSEQQRDPAIKSWSSSHNVMKEQSNQPASTHGW-----------DSPGAKGWNDVEEQ 1569 Query: 180 KRPQVEEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSEE---SPSYGGWNIR 350 + W + G+ +Q++ + WG E + PS + SP+ G + Sbjct: 1570 SQ---------WNQRGS----AVKNDQSESSHGWGPSNEQNQLPSSQGWGSPNAGAGHES 1616 Query: 351 KSEKRPCDAWGQRDGE----EGTGGWNKSEGKSQSSNAGDWKIKKGRAAMSPGKFDDRND 518 +++ + WGQ G+ EG+ GW SN +WK KK R G +D D Sbjct: 1617 ETQSQ----WGQPSGKKSRPEGSRGWG--------SNNTEWKNKKNRPNKPQGPLND--D 1662 Query: 519 WSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLD 698 +SA GIFTATRQR+D FTSEEQ+IL DVEPI+QSI+RIMHQ+ YNDGDPL+ADDQSY+LD Sbjct: 1663 YSAGGIFTATRQRVDIFTSEEQDILLDVEPIMQSIRRIMHQAGYNDGDPLSADDQSYILD 1722 Query: 699 HVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKY 878 VFN HPDK KMG+G++YVMV++HSSF ++RCFY+VSTDGH+EDFSYRKC+ENFIK+KY Sbjct: 1723 KVFNNHPDKAVKMGTGIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKY 1782 Query: 879 PGMAESFIKKYFRKPRSG-----NPAPEEG 953 P AE+FI KYFR+PR+G + PE+G Sbjct: 1783 PDNAETFIGKYFRRPRAGGNRERSVIPEDG 1812 >ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis sativus] Length = 1959 Score = 265 bits (677), Expect = 4e-68 Identities = 146/344 (42%), Positives = 200/344 (58%), Gaps = 30/344 (8%) Frame = +3 Query: 9 PSQSSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPSEESPRYGGWNINESQKRP 188 P S D WG D + + +S W + +E S +G + QK Sbjct: 1597 PEASQGFGNDAWGQQKSRDVIKPSLANNESNLSGWGSQIESNEGSD-HGFDQVTNEQKSS 1655 Query: 189 QV------EEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSEESPSYG----- 335 E+ + W + + EA + G+QND WGQ + + + S ES Sbjct: 1656 DTRGWDSQEKTDKPWDKQKSLEASQSWGSQNDSLGSWGQPQRASEECSRESQDDSSTQFS 1715 Query: 336 ---------GWNIRKSEKRPCDAWGQ-RDGEEGTG--GWNKSE--GKSQSSNAGDWKIKK 473 GW +KS + WG ++ E T GW+K K NAG+WK +K Sbjct: 1716 QLKPPETSLGWEQQKSPE-VSHGWGSHKESSEQTSSHGWDKKNQGSKGWGGNAGEWKNRK 1774 Query: 474 GRAAMSPGKFDDRNDWSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYN 653 R SPG +D D + ++TA+ QRLD FTSEEQ+IL+D+EPI+QSI+++MHQS YN Sbjct: 1775 NRPPKSPGMSND--DANLRALYTASGQRLDMFTSEEQDILADIEPIMQSIRKVMHQSGYN 1832 Query: 654 DGDPLTADDQSYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHRED 833 DGDPL+A+DQS+VL VFN+HPDK KMG+G+++ MV++HSSFQ++RCFY+V+TDGH+ED Sbjct: 1833 DGDPLSAEDQSFVLQSVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCFYVVTTDGHKED 1892 Query: 834 FSYRKCMENFIKDKYPGMAESFIKKYFRKPRSG-----NPAPEE 950 FSYRKC++NFIK KYP +AE F+ KYFRKPR NPA EE Sbjct: 1893 FSYRKCLDNFIKGKYPDLAEMFVAKYFRKPRPNRNRDRNPASEE 1936 >ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit 1-like [Cucumis sativus] Length = 2019 Score = 265 bits (677), Expect = 4e-68 Identities = 146/344 (42%), Positives = 200/344 (58%), Gaps = 30/344 (8%) Frame = +3 Query: 9 PSQSSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPSEESPRYGGWNINESQKRP 188 P S D WG D + + +S W + +E S +G + QK Sbjct: 1657 PEASQGFGNDAWGQQKSRDVIKPSLANNESNLSGWGSQIESNEGSD-HGFDQVTNEQKSS 1715 Query: 189 QV------EEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSEESPSYG----- 335 E+ + W + + EA + G+QND WGQ + + + S ES Sbjct: 1716 DTRGWDSQEKTDKPWDKQKSLEASQSWGSQNDSLGSWGQPQRASEECSRESQDDSSTQFS 1775 Query: 336 ---------GWNIRKSEKRPCDAWGQ-RDGEEGTG--GWNKSE--GKSQSSNAGDWKIKK 473 GW +KS + WG ++ E T GW+K K NAG+WK +K Sbjct: 1776 QLKPPETSLGWEQQKSPE-VSHGWGSNKESSEQTSSHGWDKKNQGSKGWGGNAGEWKNRK 1834 Query: 474 GRAAMSPGKFDDRNDWSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYN 653 R SPG +D D + ++TA+ QRLD FTSEEQ+IL+D+EPI+QSI+++MHQS YN Sbjct: 1835 NRPPKSPGMSND--DANLRALYTASGQRLDMFTSEEQDILADIEPIMQSIRKVMHQSGYN 1892 Query: 654 DGDPLTADDQSYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHRED 833 DGDPL+A+DQS+VL VFN+HPDK KMG+G+++ MV++HSSFQ++RCFY+V+TDGH+ED Sbjct: 1893 DGDPLSAEDQSFVLQSVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCFYVVTTDGHKED 1952 Query: 834 FSYRKCMENFIKDKYPGMAESFIKKYFRKPRSG-----NPAPEE 950 FSYRKC++NFIK KYP +AE F+ KYFRKPR NPA EE Sbjct: 1953 FSYRKCLDNFIKGKYPDLAEMFVAKYFRKPRPNRNRDRNPASEE 1996 >ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina] gi|557522591|gb|ESR33958.1| hypothetical protein CICLE_v10004129mg [Citrus clementina] Length = 1867 Score = 252 bits (644), Expect = 2e-64 Identities = 140/329 (42%), Positives = 195/329 (59%), Gaps = 25/329 (7%) Frame = +3 Query: 39 TWGTLA--EADKTGQNKNDGKSQWGQ--------WKDSAKPSEESP----RYGGWNINES 176 +W T A + D G + S WG W+DS+KPS + GGWN+ ++ Sbjct: 1553 SWNTKALDKLDDVGSAVENSSSVWGAREDFSTKGWEDSSKPSANEKSIVHQIGGWNVPDA 1612 Query: 177 QKRPQVEEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSEESP-SYGGWNIRK 353 + +WG+ +T + + WG ++ HT+ P S W++ Sbjct: 1613 KGTDD-----SSWGKQ-----KLTENAKGTDDSSWG--KQKHTENESSQPASSNAWDLPD 1660 Query: 354 S---EKRPCDAWGQRDGEEGTGGWNKSEGKSQSSNAGDWKIKKGRAAMSPGKFDDRNDWS 524 + + WGQ E + K+ G + SS G+WK KK R SPG +D D + Sbjct: 1661 ATGGSETEMQVWGQSRKEP----FKKNRGWASSS--GEWKGKKNRPPRSPGVVND--DST 1712 Query: 525 ASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDHV 704 + ++T TRQRLD FTSEEQ+ILSDVEPI++SI+RIMHQS YNDGD L+ADD+S++ D+V Sbjct: 1713 VNAMYTVTRQRLDMFTSEEQDILSDVEPIMRSIRRIMHQSGYNDGDRLSADDKSFIFDNV 1772 Query: 705 FNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPG 884 FNYHPDK KMG+G+++ V+KH SFQD+RC ++VSTDG ++DFSYRKC+E+FI+ KYP Sbjct: 1773 FNYHPDKAMKMGAGIDHFKVDKHGSFQDSRCLFVVSTDGSQQDFSYRKCLESFIRGKYPE 1832 Query: 885 MAESFIKKYFRKPRSGN-------PAPEE 950 + FI KYFR+PRSG P PEE Sbjct: 1833 FVDEFIGKYFRRPRSGGNREPSLPPVPEE 1861 >ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa] gi|550343552|gb|EEE78905.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa] Length = 1920 Score = 252 bits (644), Expect = 2e-64 Identities = 150/332 (45%), Positives = 193/332 (58%), Gaps = 18/332 (5%) Frame = +3 Query: 6 WPSQSSDPSADTWGTLAEADKTGQNKNDGKSQ-WGQWKDSAKPSEE--SPRYGGWN---I 167 W ++ + ADT A G+ K+ SQ WG K+S K E P G N Sbjct: 1600 WGNKVTSNQADT------ASGWGKPKSSENSQGWGLSKESGKEVHEWGVPNSAGGNGSET 1653 Query: 168 NESQKRPQVEEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSEESPSYGGWNI 347 N + + + E G+ G ++ G G P+ E P E + GW + Sbjct: 1654 NNNNENQSLVEQGKESGWDNKASSNQEGTASGWGKPKSPALSEGWGSPREPVKAVHGWGV 1713 Query: 348 RKSE----KRPCDAWGQRDGE------EGTGGWNKSEGKSQSSNAGDWKIKKGRAAMSPG 497 S WGQ+ E EG+ GW SN GDWK K+ R P Sbjct: 1714 PNSGGGNGSGRDQQWGQQSREFKKDRFEGSRGWG--------SNNGDWKNKRNR----PS 1761 Query: 498 KFDDRNDWSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTAD 677 K D +ASGIFT TRQRLD FTS+EQ+ILSD+EP++ SI+RIMHQ+ YNDGDPL+AD Sbjct: 1762 K--PHEDLNASGIFTTTRQRLDVFTSQEQDILSDIEPLMLSIRRIMHQTGYNDGDPLSAD 1819 Query: 678 DQSYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCME 857 DQSYVLD+VF+YHPDK KMG+G+++V V++HS+FQ++RCFYIVSTDG ++DFSYRKC+E Sbjct: 1820 DQSYVLDNVFHYHPDKAVKMGAGIDHVTVSRHSNFQESRCFYIVSTDGCKQDFSYRKCLE 1879 Query: 858 NFIKDKYPGMAESFIKKYF--RKPRSGNPAPE 947 NFIK KYP +A+ FI KYF R R PAPE Sbjct: 1880 NFIKGKYPDLADEFIAKYFARRGNRQRTPAPE 1911 >ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus sinensis] Length = 1865 Score = 249 bits (635), Expect = 3e-63 Identities = 139/329 (42%), Positives = 194/329 (58%), Gaps = 25/329 (7%) Frame = +3 Query: 39 TWGTLA--EADKTGQNKNDGKSQWGQ--------WKDSAKPSEESP----RYGGWNINES 176 +W T A + D G + S WG W+DS+KPS + GGWN+ ++ Sbjct: 1551 SWKTKALDKLDDVGSAVENSSSVWGAREDFSTKGWEDSSKPSANEKSIVHQIGGWNVPDA 1610 Query: 177 QKRPQVEEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSEESP-SYGGWNIRK 353 + WG+ +T + + WG ++ HT+ P S W++ Sbjct: 1611 KGTDD-----SCWGKQ-----KLTENAKGTDDSSWG--KQKHTENESPQPASSNAWDLPD 1658 Query: 354 S---EKRPCDAWGQRDGEEGTGGWNKSEGKSQSSNAGDWKIKKGRAAMSPGKFDDRNDWS 524 + + WGQ E + K+ G + SS G+WK KK R SPG +D D + Sbjct: 1659 ATGGSETEMQVWGQSRKEP----FKKNRGWASSS--GEWKGKKNRPPRSPGVVND--DST 1710 Query: 525 ASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDHV 704 + ++T TRQRLD FTSEEQ+ILS VEPI++SI+RIMHQS YNDGD L+ADD+S++ D+V Sbjct: 1711 VNAMYTVTRQRLDMFTSEEQDILSHVEPIMRSIRRIMHQSGYNDGDRLSADDKSFIFDNV 1770 Query: 705 FNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPG 884 FNYHPDK KMG+G+++ V+KH SFQD+RC ++VSTDG ++DFSYRKC+E+FI+ KYP Sbjct: 1771 FNYHPDKAMKMGAGIDHFKVDKHGSFQDSRCLFVVSTDGSQQDFSYRKCLESFIRGKYPD 1830 Query: 885 MAESFIKKYFRKPRSGN-------PAPEE 950 + + FI KYFR+PRSG P PEE Sbjct: 1831 LVDEFIGKYFRRPRSGGNREPSLPPVPEE 1859 >ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1 [Theobroma cacao] gi|590569189|ref|XP_007011000.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1 [Theobroma cacao] gi|508727912|gb|EOY19809.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1 [Theobroma cacao] gi|508727913|gb|EOY19810.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1 [Theobroma cacao] Length = 1788 Score = 246 bits (627), Expect = 2e-62 Identities = 139/319 (43%), Positives = 185/319 (57%), Gaps = 39/319 (12%) Frame = +3 Query: 93 KSQWGQW-KDSAKPSEESPRYGGWNINESQK---------------------RPQVEEPG 206 +++WG W K +K + SP+ G +NE K + + G Sbjct: 1456 ETEWGDWGKGKSKTQDVSPKVDGTCVNEQTKLSDWGLKKNDTQDVSMEEKTFKSNGADTG 1515 Query: 207 ETWGRHGTEEADVTGGNQNDGNPQ--WGQWRESHTKPSEESPSYGGWNIRKSEKRPCDAW 380 +WG G E + ND P WG TK ++S GW +KS + W Sbjct: 1516 TSWGTMGKESEKP---DANDALPWSGWGTQDVIPTKTLDDSSKSSGWEQQKSPECS-QGW 1571 Query: 381 GQRDGEE---GTGGWNKSEG--KSQSSNAGDWKIKKG--RAAMSPGKFDD--------RN 515 G D + GW+ G +QS W +G R A K + + Sbjct: 1572 GSLDESNQPASSNGWDTPNGLGSTQSEKQHQWGQSRGSRRWASDASKKNHPVKSARVMND 1631 Query: 516 DWSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVL 695 D S + ++TATRQRLD FTSEEQ+ILSDVEP++QSI++IMHQS YNDGDPL+A DQS++L Sbjct: 1632 DSSMAAMYTATRQRLDMFTSEEQDILSDVEPLMQSIRKIMHQSGYNDGDPLSALDQSFIL 1691 Query: 696 DHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDK 875 ++VF +HPDK KMG+GV+YVMV+KHS+F D+RCFY+VSTDG ++DFSYRKC++NFIK K Sbjct: 1692 ENVFTHHPDKAIKMGAGVDYVMVSKHSNFPDSRCFYVVSTDGRKQDFSYRKCLDNFIKGK 1751 Query: 876 YPGMAESFIKKYFRKPRSG 932 YP MA+ FI KYFRKPR G Sbjct: 1752 YPDMADVFIAKYFRKPRFG 1770 >ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria vesca subsp. vesca] Length = 1991 Score = 245 bits (625), Expect = 4e-62 Identities = 137/321 (42%), Positives = 188/321 (58%), Gaps = 10/321 (3%) Frame = +3 Query: 6 WPSQSS-DPSADTWGTLAEADKT----GQNKNDGKSQ--WGQWKDSAKPSEESPRYGGWN 164 W Q S D S TW A+ + GQ K+ SQ WG K ++ S+ G W Sbjct: 1671 WERQKSPDTSKGTWEQPKSAEMSHGAWGQQKSPDVSQGVWGLEKPASTNSQ-----GSWG 1725 Query: 165 INESQKRPQVEEPGETWGRHGTEE-ADVTGGNQNDGNPQWGQWRESHTKPSEESPSYGGW 341 QK P++ P WG+ + + + T G Q G W + + + + W Sbjct: 1726 ---QQKSPEI--PQGNWGQQTSPDISQGTWGQQKSPEMSQGSWGQQKPSDTSQPATVNQW 1780 Query: 342 NIRKSEKRPCDAWGQRDGEEGTGGWNK--SEGKSQSSNAGDWKIKKGRAAMSPGKFDDRN 515 + S+ Q+ G G K G+S NAG+WK K R A SPG +D Sbjct: 1781 D---SQSEAAVERHQQWGHNGDSNKRKRFEGGRSWGPNAGEWKGKNSRPAKSPGMVND-- 1835 Query: 516 DWSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVL 695 D S + I+TATRQRLD FTSEEQ++LS +EP + SI+RIMHQS YNDGD L+A+D S++L Sbjct: 1836 DSSVAAIYTATRQRLDIFTSEEQDVLSHIEPTMLSIRRIMHQSGYNDGDQLSAEDHSFIL 1895 Query: 696 DHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDK 875 D VFN+HP+K KMGSG++Y V++H SFQ++RC +++STDG +EDFSYRKC++N IK+K Sbjct: 1896 DKVFNFHPEKEAKMGSGIDYFTVDRHGSFQESRCLFVISTDGRKEDFSYRKCLQNMIKEK 1955 Query: 876 YPGMAESFIKKYFRKPRSGNP 938 YP +AE+F KYF +PR NP Sbjct: 1956 YPELAEAFNDKYFSRPRPRNP 1976 >ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica] gi|462415343|gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica] Length = 1855 Score = 240 bits (612), Expect = 1e-60 Identities = 134/321 (41%), Positives = 186/321 (57%), Gaps = 14/321 (4%) Frame = +3 Query: 18 SSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPSEESPRYGGWNINESQ------ 179 + + + TWGT ++ + G S K S W N ++ Sbjct: 1523 AKENTTSTWGTTTASENDWCGRGVGHDDSASL--SGKKSSVLNTSSVWATNTAREDATSA 1580 Query: 180 --KRPQVEEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSEESPSYGGWNIRK 353 K P E TWG E D G P Q TKP ++S S GW+ Sbjct: 1581 WGKNPAKENTTSTWGTTTASENDWCGREAGKVEPVDLQ----PTKPQDDSASLSGWDSPT 1636 Query: 354 SEKRPCDA---WGQRDGEEGTGGWNKSEG-KSQSSNAGDWKIKKGRAAMSPGKFDDRNDW 521 + + WGQ G++ N+ EG ++ S+ G+WK K R SPG +D + Sbjct: 1637 GDGNSGERNHQWGQHRGDQTKK--NRFEGARNWVSSPGEWK-NKNRPPKSPGMVNDNSTM 1693 Query: 522 SASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDH 701 A ++T TRQRLD FTSEEQ++LS++EP+++S++RIMHQS YNDGDPL+ DDQS+VLD+ Sbjct: 1694 GA--LYTVTRQRLDMFTSEEQDVLSNIEPVMRSLRRIMHQSGYNDGDPLSGDDQSFVLDN 1751 Query: 702 VFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYP 881 VFNYHPDK KMG G++++ VN+H SFQD+RCF++VSTDG EDFSYRKC++N+I++K+P Sbjct: 1752 VFNYHPDKAAKMGCGIDHLTVNRHGSFQDSRCFFVVSTDGRTEDFSYRKCLDNYIREKFP 1811 Query: 882 GMAESFIKKYF--RKPRSGNP 938 +AE+FI KYF R R NP Sbjct: 1812 DLAETFIGKYFSRRGNRERNP 1832 >gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis] Length = 2054 Score = 236 bits (601), Expect = 2e-59 Identities = 139/361 (38%), Positives = 198/361 (54%), Gaps = 51/361 (14%) Frame = +3 Query: 3 QWPSQSSDPS---ADTWGTLAEADKTGQNKNDGKSQWGQWKD---------SAKPSEESP 146 +W SD + + W T ++ KT K+ W W S K ++ P Sbjct: 1664 RWSKADSDNTHAKSTDWNTTSDRTKTMT-----KNTWSGWHGEKSEKEDILSTKSQQDLP 1718 Query: 147 RYGGWN---------------INESQKRP-QVEEPGETWGRHGTEEADVTGGNQNDGNPQ 278 R W +++ Q P QV EP + W T + V+G ++ Sbjct: 1719 RNSDWGAVSNRENNAERAYEFVSKDQPLPDQVSEPCD-WDNKLTPQKAVSGWLSSNDEGW 1777 Query: 279 WGQWRESHTKPSEESPS-YGGWNIRKS-------EKRPCDAWGQRDGEEG---------- 404 S K +SP Y W R S E ++W R G+ G Sbjct: 1778 TKDANSSERKEPTDSPVVYNSWEKRTSSEISQNVESASFNSWLPRAGDGGEVEKPNEWVK 1837 Query: 405 -TGGWNKSEGKSQS---SNAGDWKIKKGRAAMSPGKFDD-RNDWSASGIFTATRQRLDQF 569 +G + K+ G++ S++GDWKIKK PGKF ND ++ +FT TRQRLD F Sbjct: 1838 KSGSFKKNHGETSGGWGSDSGDWKIKKNH----PGKFPRMNNDNTSVRLFTETRQRLDLF 1893 Query: 570 TSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDHVFNYHPDKTTKMGSGV 749 TSEEQ+ LS +EP ++SI+RIMH+S YNDGDP+ +DQS+++D+VFNYHPDK KMGSG+ Sbjct: 1894 TSEEQDALSLIEPTMKSIRRIMHKSGYNDGDPIRPEDQSFIIDNVFNYHPDKAAKMGSGI 1953 Query: 750 NYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKPRS 929 +++M+++HSSFQD+RC Y+VSTDG +EDFSYRKC+ N IK ++P +A+ F+ KYFRKP+ Sbjct: 1954 DHLMISRHSSFQDSRCLYVVSTDGRKEDFSYRKCLGNLIKSRFPDVADEFLDKYFRKPKP 2013 Query: 930 G 932 G Sbjct: 2014 G 2014 >ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max] Length = 2082 Score = 234 bits (598), Expect = 5e-59 Identities = 130/330 (39%), Positives = 176/330 (53%), Gaps = 28/330 (8%) Frame = +3 Query: 24 DPSADTWGTLAEADKTGQNKNDGKSQWG------------QWKDSAKPSEESPRYGG--- 158 D D+WG+ DK Q N G WG +W K E P G Sbjct: 1713 DNVQDSWGSGKRKDKVTQEDNSGSGGWGANRTDLAKSKSSEWSSWGKNKSEIPAGGSENV 1772 Query: 159 ----WNINESQKRPQVEEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSEESP 326 W + + Q E G W R+ E D GG++ PQ W + K + Sbjct: 1773 QNDSWGSGKLEDDTQKENSGSAWVRNKAETID--GGSEK---PQEDAWNSGNWKAESKVG 1827 Query: 327 SYGGWNIRKSEKRPCDAWGQRDGEEGTGGWNK--SEGKSQSSNAGDW------KIKKGRA 482 + + SE + D+ Q + + GW + S+S W KK R Sbjct: 1828 NASWGKPKSSESQAWDSHNQSNQNSSSQGWESHIASANSESEKGFQWGKQGRDSFKKNRF 1887 Query: 483 AMSPGKFDDRNDW-SASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDG 659 S G+ + DW + + A QRLD ++S EQ++L D+EPI+QSI+RIM Q YNDG Sbjct: 1888 EGSQGRGSNAGDWKNRNRPPRAPGQRLDIYSSGEQDVLKDIEPIMQSIRRIMQQQGYNDG 1947 Query: 660 DPLTADDQSYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFS 839 DPL A+DQ +VL++VF +HPDK TKMG+G++YVMVNKHSSFQ++RCFY+V DG +DFS Sbjct: 1948 DPLAAEDQLFVLENVFEHHPDKETKMGTGIDYVMVNKHSSFQESRCFYVVCKDGESKDFS 2007 Query: 840 YRKCMENFIKDKYPGMAESFIKKYFRKPRS 929 YRKC+ N+I KYP +AESF+ KYFRKPR+ Sbjct: 2008 YRKCLANYISKKYPDLAESFLGKYFRKPRA 2037 >ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max] Length = 2020 Score = 228 bits (581), Expect = 5e-57 Identities = 128/332 (38%), Positives = 178/332 (53%), Gaps = 35/332 (10%) Frame = +3 Query: 39 TWGTLAEADKTGQNKNDGKSQWG------------QWKDSAKPSEESPRYGGWNI----- 167 +WG+ DK Q N G WG +W K E P G N+ Sbjct: 1668 SWGSGKRKDKVTQEDNSGSGDWGANRTDLAITKSSEWSSWGKNKTEIPAGGSANVQNDSW 1727 Query: 168 -----NESQKRPQV-----EEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSE 317 N++QK E G W R+ E D GG++ PQ W + K Sbjct: 1728 GLGKLNDTQKDNSGCGAWGENSGSAWVRNKAETID--GGSEK---PQEDAWNSGNWKAES 1782 Query: 318 ESPSYGGWNIRKSEKRPCDAWGQRDGEEGTGGWNKSEGKSQSSNAGDWKIKKGRAAMSPG 497 + + + SE D+ Q + + GW + S N ++ KGR + Sbjct: 1783 KVGNTTWGKPKSSESHAWDSHNQSNQNSSSQGWESHIASANSENEKGFQWGKGRDSFKKN 1842 Query: 498 KFD-------DRNDW-SASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYN 653 +F+ + DW + + A QRLD ++SEEQ++L D+EPI+QSI+RIM Q Y+ Sbjct: 1843 RFEGSQGRGSNAGDWKNRNRPPRAPGQRLDIYSSEEQDVLKDIEPIMQSIRRIMQQQGYS 1902 Query: 654 DGDPLTADDQSYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHRED 833 DGDPL A+DQ +VL++VF +HPDK TKMG+G++YVMVNKHSSFQ++RCFY+V DG +D Sbjct: 1903 DGDPLAAEDQLFVLENVFEHHPDKETKMGAGIDYVMVNKHSSFQESRCFYVVCKDGQSKD 1962 Query: 834 FSYRKCMENFIKDKYPGMAESFIKKYFRKPRS 929 FSYRKC+ N+I KYP +AESF+ KYFRKPR+ Sbjct: 1963 FSYRKCLANYISKKYPDLAESFLGKYFRKPRA 1994 >ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phaseolus vulgaris] gi|561006762|gb|ESW05756.1| hypothetical protein PHAVU_011G206900g [Phaseolus vulgaris] Length = 2052 Score = 228 bits (580), Expect = 6e-57 Identities = 134/353 (37%), Positives = 192/353 (54%), Gaps = 46/353 (13%) Frame = +3 Query: 9 PSQSSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPSEESPRYGGWNINESQKRP 188 P+ S+ D+WG+ D T + + S G KD + S + GW N+S+ Sbjct: 1669 PAGGSENVQDSWGSGTRKDVTQVDTSVSGSWGGSRKDQTNTT--SNEWAGWGRNKSEIPA 1726 Query: 189 ----QVEEPGETWGRHGTEEADVTGGNQNDGNPQWG------------QWRESHTKPSE- 317 V+E ++WG G + DVT N G+ WG +W + + ++ Sbjct: 1727 GGCETVQE--DSWGS-GKLKDDVTQ-KDNSGSGAWGANKTGLTKTEVDEWARNKVETADG 1782 Query: 318 -----ESPSYGGWNIRKSEKRPCDAWGQRDGEEGTGGWNKSEGKSQSSNAGDWK------ 464 + S+ N++ K +WG + G+ W+ +Q+S++ W+ Sbjct: 1783 GSEKLQEDSWNSGNLKSESKVGNASWG-KPNSSGSQSWDSHNQSNQNSSSRGWESHIASA 1841 Query: 465 -----------------IKKGRAAMSPGKFDDRNDWSASGIFTATR-QRLDQFTSEEQNI 590 KK R S G+ + DW T QRLD ++SEEQ++ Sbjct: 1842 NSDSEKGFQWGKQGRESFKKNRFEGSQGRGSNSGDWKNRNRPPRTPGQRLDLYSSEEQDV 1901 Query: 591 LSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDHVFNYHPDKTTKMGSGVNYVMVNK 770 L ++EPI+QSI+RIM Q YNDGDPL ADDQ +VL++VF +HPDK TKMG+G++YVMVNK Sbjct: 1902 LKEIEPIMQSIRRIMQQQGYNDGDPLAADDQLFVLENVFEHHPDKDTKMGAGIDYVMVNK 1961 Query: 771 HSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKPRS 929 HSSFQD+RCFY+V DG REDFSYRKC++N+I+ KYP +AESF KYFRKPR+ Sbjct: 1962 HSSFQDSRCFYVVLKDGRREDFSYRKCLDNWIRKKYPELAESFFGKYFRKPRN 2014 >gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus guttatus] Length = 2113 Score = 223 bits (569), Expect = 1e-55 Identities = 135/343 (39%), Positives = 190/343 (55%), Gaps = 38/343 (11%) Frame = +3 Query: 12 SQSSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAK----PSEESPRYGGWNINESQ 179 S + TWG + KT Q +N KS WG D+A PS +S G W+ + Sbjct: 1719 SSAQKGEQSTWGHV----KTSQTQN--KSTWGG--DTAPIENVPSPKSQEDGLWSSASAA 1770 Query: 180 KRPQV-----------------EEPGETWGRHGT----EEADVTGGNQNDGNPQWGQWRE 296 ++ Q EP TWG + TG N + +P W Sbjct: 1771 QKEQDGSKDNNPWQTKVAEQANSEPLSTWGSSSDWVKPDSQTPTGDNTKNESP----WSS 1826 Query: 297 SHTKPSEESPSYGGWNIRK------SEKRPCDAWGQRDGEEGTGGWNKSEGKSQSSNAG- 455 S K +S GW K ++++P WG+ G GW + G+ + + G Sbjct: 1827 SQ-KLLNDSTDSQGWGSSKVDTANDNDEQP--QWGRGRGRGRGRGWGRGVGRGREGSQGR 1883 Query: 456 ------DWKIKKGRAAMSPGKFDDRNDWSASGIFTATRQRLDQFTSEEQNILSDVEPILQ 617 DWK K+ S G DD N A GIFTA+RQRLD FT+EEQ +L + E I++ Sbjct: 1884 GPTNDRDWKNKR-----SGGPVDDPN---APGIFTASRQRLDSFTAEEQEVLLETETIMK 1935 Query: 618 SIKRIMHQSRYNDGDPLTADDQSYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRC 797 +I+R+MHQ+ YNDGDPL+ADDQ Y++D+V N+HP+K+ K+G+G++++MVNKHS FQ +RC Sbjct: 1936 NIRRVMHQTGYNDGDPLSADDQKYIVDNVLNHHPEKSLKIGAGLDHIMVNKHSEFQMSRC 1995 Query: 798 FYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKPR 926 Y V+ DG + DFSYRKC++NFI+ KYP +AESFI KYF+KP+ Sbjct: 1996 LYAVTIDGSKADFSYRKCLDNFIRGKYPDVAESFIAKYFKKPQ 2038 >ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|355521872|gb|AET02326.1| Protein DCL [Medicago truncatula] Length = 481 Score = 221 bits (562), Expect = 8e-55 Identities = 132/358 (36%), Positives = 192/358 (53%), Gaps = 45/358 (12%) Frame = +3 Query: 12 SQSSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPS-EESPRYGGW-----NINE 173 SQ + WG T ND +S WGQ KD E+S R W N+ + Sbjct: 74 SQKDSQKSSAWGA------TKPKSNDNRSSWGQKKDEIHVMPEDSSRSNAWEQKPENVKD 127 Query: 174 S------------------QKRP--QVEEPGETWGRHGTEEADVTGGNQNDGNPQWGQWR 293 S + RP EP ++G+ ++E + ++N+ + WG+ + Sbjct: 128 SWVAKVPVANSSWGKAKSPENRPWDSKNEPNNSFGKPNSQENE-PWDSKNESDSSWGKPK 186 Query: 294 ESHTKP-SEESPSYGGWNIRKS-EKRPCDAWGQRDGEEGTGGWNK--SEGKSQSSNAGDW 461 ++P ++ S W KS E P D+ + + G+ GW+ + S+S + W Sbjct: 187 SQESQPWDSKNESNSSWGKPKSQENHPWDSKNESNQTAGSRGWDSQVASANSESDKSFQW 246 Query: 462 KIKKGRAAMSPGKFD-------DRNDW-SASGIFTATRQRLDQFTSEEQNILSDVEPILQ 617 K+GR + +F+ + DW + S QR + +T EEQ+I+ D+EPI+Q Sbjct: 247 G-KQGRDSFKKNRFEGSQSGGPNAGDWKNRSRPVRPPGQRFELYTPEEQDIMKDIEPIVQ 305 Query: 618 SIKRIMHQSRYNDGDPLTADDQSYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRC 797 SI+RIM YNDGDPL +DQ YVL++VF +HPDK TKMG GV++VMV+KHS+FQD+RC Sbjct: 306 SIRRIMQLQGYNDGDPLANEDQKYVLENVFEHHPDKETKMGVGVDHVMVSKHSNFQDSRC 365 Query: 798 FYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKP-------RSGNPAPEE 950 Y+V DG +EDFSYRKC+EN ++ KYP AESF KYFRKP ++ NPA E+ Sbjct: 366 LYVVLKDGKKEDFSYRKCLENLVRKKYPETAESFCGKYFRKPQPRVKRDQTPNPAGEQ 423 >ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula] gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase subunit [Medicago truncatula] Length = 2032 Score = 221 bits (562), Expect = 8e-55 Identities = 132/358 (36%), Positives = 192/358 (53%), Gaps = 45/358 (12%) Frame = +3 Query: 12 SQSSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPS-EESPRYGGW-----NINE 173 SQ + WG T ND +S WGQ KD E+S R W N+ + Sbjct: 1625 SQKDSQKSSAWGA------TKPKSNDNRSSWGQKKDEIHVMPEDSSRSNAWEQKPENVKD 1678 Query: 174 S------------------QKRP--QVEEPGETWGRHGTEEADVTGGNQNDGNPQWGQWR 293 S + RP EP ++G+ ++E + ++N+ + WG+ + Sbjct: 1679 SWVAKVPVANSSWGKAKSPENRPWDSKNEPNNSFGKPNSQENE-PWDSKNESDSSWGKPK 1737 Query: 294 ESHTKP-SEESPSYGGWNIRKS-EKRPCDAWGQRDGEEGTGGWNK--SEGKSQSSNAGDW 461 ++P ++ S W KS E P D+ + + G+ GW+ + S+S + W Sbjct: 1738 SQESQPWDSKNESNSSWGKPKSQENHPWDSKNESNQTAGSRGWDSQVASANSESDKSFQW 1797 Query: 462 KIKKGRAAMSPGKFD-------DRNDW-SASGIFTATRQRLDQFTSEEQNILSDVEPILQ 617 K+GR + +F+ + DW + S QR + +T EEQ+I+ D+EPI+Q Sbjct: 1798 G-KQGRDSFKKNRFEGSQSGGPNAGDWKNRSRPVRPPGQRFELYTPEEQDIMKDIEPIVQ 1856 Query: 618 SIKRIMHQSRYNDGDPLTADDQSYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRC 797 SI+RIM YNDGDPL +DQ YVL++VF +HPDK TKMG GV++VMV+KHS+FQD+RC Sbjct: 1857 SIRRIMQLQGYNDGDPLANEDQKYVLENVFEHHPDKETKMGVGVDHVMVSKHSNFQDSRC 1916 Query: 798 FYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKP-------RSGNPAPEE 950 Y+V DG +EDFSYRKC+EN ++ KYP AESF KYFRKP ++ NPA E+ Sbjct: 1917 LYVVLKDGKKEDFSYRKCLENLVRKKYPETAESFCGKYFRKPQPRVKRDQTPNPAGEQ 1974 >ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer arietinum] Length = 2263 Score = 213 bits (543), Expect = 1e-52 Identities = 128/329 (38%), Positives = 172/329 (52%), Gaps = 29/329 (8%) Frame = +3 Query: 27 PSADTWGTLAEADKTGQNKNDGKSQWGQWKD------SAKPSEESPRYGGWNINESQKRP 188 P +WG +A K K++ S WG+ KD S K E+S G Sbjct: 1896 PKMGSWGATKDATKP---KSNDWSSWGKKKDEIHDGGSEKIQEDSWSSGKRKAESKSVAD 1952 Query: 189 QVEEPGE---TWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKP------SEESPSYGGW 341 ++E TW + D N WG+ + +P S + S GW Sbjct: 1953 VMQEDSSKSNTWEHKSDDVKDSWDAKVPVANSSWGKPKSQENQPWDSKNESNPTASSRGW 2012 Query: 342 NIR----KSEKRPCDAWGQR----------DGEEGTGGWNKSEGKSQSSNAGDWKIKKGR 479 + + S+ WG+ +G +G+ GW SNAGDWK K R Sbjct: 2013 DSQVASANSDSDKNFQWGKPGRESFKKNRFEGSQGSQGWG--------SNAGDWK-NKNR 2063 Query: 480 AAMSPGKFDDRNDWSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDG 659 A PG RLD ++SEEQ+IL D+EPI+QSI+RIM Q YNDG Sbjct: 2064 PARPPGP------------------RLDLYSSEEQDILKDIEPIVQSIRRIMQQQGYNDG 2105 Query: 660 DPLTADDQSYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFS 839 DPL A+DQ YVL++VF +HPDK TKMG G+++VMV++HS+FQ++RCFY+V DG +EDFS Sbjct: 2106 DPLAAEDQQYVLENVFEHHPDKETKMGVGIDHVMVSRHSNFQESRCFYVVLKDGKKEDFS 2165 Query: 840 YRKCMENFIKDKYPGMAESFIKKYFRKPR 926 YRKC+E+F++ KY AESF KYFRKPR Sbjct: 2166 YRKCLESFVRKKYADTAESFCGKYFRKPR 2194 >ref|XP_006293553.1| hypothetical protein CARUB_v10022497mg [Capsella rubella] gi|482562261|gb|EOA26451.1| hypothetical protein CARUB_v10022497mg [Capsella rubella] Length = 1959 Score = 213 bits (542), Expect = 2e-52 Identities = 120/311 (38%), Positives = 179/311 (57%), Gaps = 5/311 (1%) Frame = +3 Query: 18 SSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPSEESPRYGGWNINESQKRPQVE 197 +S+PSA WG+ K G + WG W K SE GW N + + E Sbjct: 1571 NSEPSA--WGSQG---KKKAETESGPASWGAW--DKKISETESGLAGWG-NGDKINSETE 1622 Query: 198 EPGETWGRHG--TEEADVTGGNQNDGNPQWGQWRESHT--KPSEESPSYGGWNIRKSEKR 365 WG G + A N++DGNP W +E+ + K +E +G ++K Sbjct: 1623 SGAAAWGSWGQPSPTAADKDTNEDDGNP-WVSLKETKSGEKDEKEKSQWGN----PAKKF 1677 Query: 366 PCDAWGQRDGEEGTGGWNKSEGKSQSSNAGDWKIKKGRAAMSPGKFDDRNDWSASGIFTA 545 P D GGW+ G +W+ K+ P R++ + + +FTA Sbjct: 1678 PSDG--------SYGGWSNGGG-------AEWRGKRNHTPRPP-----RSEDNLAPMFTA 1717 Query: 546 TRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDHVFNYHPDK 725 T+QRLD FTSEEQ +LSDVEP+++++++IMH S Y DG+P++ DD+++VL+ + N+HP+K Sbjct: 1718 TKQRLDSFTSEEQELLSDVEPVMRTLRKIMHMSGYPDGEPISDDDKTFVLEKILNFHPEK 1777 Query: 726 TTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIK 905 K+GS V+++ V+KH++F DTRCF++VSTDG ++DFSYRK + N++ KYP AE FI Sbjct: 1778 ERKLGSAVDFITVDKHTTFTDTRCFFVVSTDGAKQDFSYRKSLNNYLMTKYPDRAEEFID 1837 Query: 906 KYFRKPR-SGN 935 KYF+KPR SGN Sbjct: 1838 KYFKKPRPSGN 1848 >gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea] Length = 1902 Score = 213 bits (542), Expect = 2e-52 Identities = 126/330 (38%), Positives = 187/330 (56%), Gaps = 23/330 (6%) Frame = +3 Query: 24 DPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPSEESPRYGGWNINESQKRPQVE-- 197 D + +WG+ E D+ ND G + AK S W+ + +++ Q Sbjct: 1556 DGVSSSWGSQKE-DRPQPKSNDRSVGDGNFDKDAKEEGLS----SWDAKKVERKTQSSWG 1610 Query: 198 EPGETWGRHGTEEADVTGG---NQNDGNPQWGQWRESHTKPSEESPSYGGWNIRKSEKRP 368 +P E+ AD G NQ + WG + K SE+ S+G N+ +K Sbjct: 1611 QPSES-KNSAQSSADHWGSDKSNQPGKSSGWGSEDTNAGKDSEKQDSWGKSNVSTWKKES 1669 Query: 369 CDAWGQRD------GEEGTGGWNKSEGKSQ----SSNAGDWKIKKGRAAMSPGKFDDR-- 512 + D G+ G GWNK + + SSN G+WK +K + + + +R Sbjct: 1670 GEKLHGSDDSQSPWGQPGGSGWNKKQPEGGRGWGSSNTGEWKSRKNQN-QNQNQNQNRPP 1728 Query: 513 ---NDWSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQ 683 ND S TATR+R+D+F +EE+++LS+VE ++QSI+RIMHQS DG+PL DDQ Sbjct: 1729 RGPNDDSPRVALTATRKRMDEFPTEEKDVLSEVESLMQSIRRIMHQSGCVDGEPLLPDDQ 1788 Query: 684 SYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENF 863 +Y++D++ NYHPDK K+G+GV+++ V KHS+FQ++RCFY+VSTDG DFSY KC+E F Sbjct: 1789 TYLIDNILNYHPDKAAKIGAGVDFITVKKHSNFQESRCFYVVSTDGKDTDFSYIKCIETF 1848 Query: 864 IKDKYPGMAESFIKKYFR---KPRSGNPAP 944 +K KYP +AESF KYFR +P+ +P+P Sbjct: 1849 VKGKYPSVAESFTSKYFRRSQRPQPASPSP 1878 Score = 75.1 bits (183), Expect = 7e-11 Identities = 58/207 (28%), Positives = 79/207 (38%), Gaps = 39/207 (18%) Frame = +3 Query: 27 PSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPSEESPRYGGWNINESQKRPQVEEPG 206 PS+ T + D + G S WG KD A P E+S + GGW+ S+++PQ E+ Sbjct: 1117 PSSGTGWNANKIDTGSGSAEGGWSSWGSKKDQANP-EDSSKTGGWSSGGSKQKPQPEDSS 1175 Query: 207 ETWGRHGTEEADVTGGNQNDGNPQWGQ-----------------------WRESHTK--- 308 ++ G ++ G NQ D +P WGQ W S K Sbjct: 1176 KSGGWDASKSWG--GSNQGDPSPVWGQPVKATNDISIENDHGSGSAEGGGWANSGMKKDL 1233 Query: 309 -PSEESPSYGGWNIRKS-----EKRPCDAWGQRDGEEGTGGWNKSEGKS-------QSSN 449 E S + GGW+ KS K P AWG + GW KS+ K + Sbjct: 1234 SKQENSSTAGGWDASKSWSGSKPKDPSSAWGAGKKTDDNNGWKKSDSKKDLASGSVEDGG 1293 Query: 450 AGDWKIKKGRAAMSPGKFDDRNDWSAS 530 W KK + P N W AS Sbjct: 1294 CSGWGPKKD--LLQPEDSAGENGWGAS 1318 Score = 63.9 bits (154), Expect = 2e-07 Identities = 52/205 (25%), Positives = 80/205 (39%), Gaps = 27/205 (13%) Frame = +3 Query: 12 SQSSDPSADTWGTLAEADKTGQNKND---GKSQWGQWKDSA-----KPSEESPRYGGWNI 167 S DPS WG +A +ND G ++ G W +S E S GGW+ Sbjct: 1189 SNQGDPSP-VWGQPVKATNDISIENDHGSGSAEGGGWANSGMKKDLSKQENSSTAGGWDA 1247 Query: 168 NESQKRPQVEEPGETWG-----------RHGTEEADVTGGNQNDGNPQ-WGQWRESHTKP 311 ++S + ++P WG + + D+ G+ DG WG ++ Sbjct: 1248 SKSWSGSKPKDPSSAWGAGKKTDDNNGWKKSDSKKDLASGSVEDGGCSGWGPKKD--LLQ 1305 Query: 312 SEESPSYGGWNIRKSE-KRPCDAWGQRDGEEGTGGWNKSEGKSQSSNA------GDWKIK 470 E+S GW KS+ K P AWG+ E GW K+ + S N D K Sbjct: 1306 PEDSAGENGWGASKSKSKEPSSAWGKPAQETDNIGWKKNNPQRDSENLEGTSGWNDKLQK 1365 Query: 471 KGRAAMSPGKFDDRNDWSASGIFTA 545 + ++ + DW ++G TA Sbjct: 1366 ENKSFSKQSQPASSKDWDSTGNITA 1390