BLASTX nr result

ID: Akebia22_contig00008221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00008221
         (1405 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40152.3| unnamed protein product [Vitis vinifera]              271   4e-70
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   271   4e-70
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...   265   4e-68
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   265   4e-68
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr...   252   2e-64
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu...   252   2e-64
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub...   249   3e-63
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put...   246   2e-62
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub...   245   4e-62
ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prun...   240   1e-60
gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus no...   236   2e-59
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub...   234   5e-59
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V sub...   228   5e-57
ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phas...   228   6e-57
gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus...   223   1e-55
ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|3555218...   221   8e-55
ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag...   221   8e-55
ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub...   213   1e-52
ref|XP_006293553.1| hypothetical protein CARUB_v10022497mg [Caps...   213   2e-52
gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac...   213   2e-52

>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  271 bits (694), Expect = 4e-70
 Identities = 153/330 (46%), Positives = 201/330 (60%), Gaps = 13/330 (3%)
 Frame = +3

Query: 3    QWPS-QSSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPSEESPRYGGWNINESQ 179
            Q PS Q  DP+  +W +     K   N+      W           +SP   GWN  E Q
Sbjct: 1581 QSPSEQQRDPAIKSWSSSHNVMKEQSNQPASTHGW-----------DSPGAKGWNDVEEQ 1629

Query: 180  KRPQVEEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSEE---SPSYGGWNIR 350
             +         W + G+        +Q++ +  WG   E +  PS +   SP+ G  +  
Sbjct: 1630 SQ---------WNQRGS----AVKNDQSESSHGWGPSNEQNQLPSSQGWGSPNAGAGHES 1676

Query: 351  KSEKRPCDAWGQRDGE----EGTGGWNKSEGKSQSSNAGDWKIKKGRAAMSPGKFDDRND 518
            +++ +    WGQ  G+    EG+ GW         SN  +WK KK R     G  +D  D
Sbjct: 1677 ETQSQ----WGQPSGKKSRPEGSRGWG--------SNNTEWKNKKNRPNKPQGPLND--D 1722

Query: 519  WSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLD 698
            +SA GIFTATRQR+D FTSEEQ+IL DVEPI+QSI+RIMHQ+ YNDGDPL+ADDQSY+LD
Sbjct: 1723 YSAGGIFTATRQRVDIFTSEEQDILLDVEPIMQSIRRIMHQAGYNDGDPLSADDQSYILD 1782

Query: 699  HVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKY 878
             VFN HPDK  KMG+G++YVMV++HSSF ++RCFY+VSTDGH+EDFSYRKC+ENFIK+KY
Sbjct: 1783 KVFNNHPDKAVKMGTGIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKY 1842

Query: 879  PGMAESFIKKYFRKPRSG-----NPAPEEG 953
            P  AE+FI KYFR+PR+G     +  PE+G
Sbjct: 1843 PDNAETFIGKYFRRPRAGGNRERSVIPEDG 1872


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  271 bits (694), Expect = 4e-70
 Identities = 153/330 (46%), Positives = 201/330 (60%), Gaps = 13/330 (3%)
 Frame = +3

Query: 3    QWPS-QSSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPSEESPRYGGWNINESQ 179
            Q PS Q  DP+  +W +     K   N+      W           +SP   GWN  E Q
Sbjct: 1521 QSPSEQQRDPAIKSWSSSHNVMKEQSNQPASTHGW-----------DSPGAKGWNDVEEQ 1569

Query: 180  KRPQVEEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSEE---SPSYGGWNIR 350
             +         W + G+        +Q++ +  WG   E +  PS +   SP+ G  +  
Sbjct: 1570 SQ---------WNQRGS----AVKNDQSESSHGWGPSNEQNQLPSSQGWGSPNAGAGHES 1616

Query: 351  KSEKRPCDAWGQRDGE----EGTGGWNKSEGKSQSSNAGDWKIKKGRAAMSPGKFDDRND 518
            +++ +    WGQ  G+    EG+ GW         SN  +WK KK R     G  +D  D
Sbjct: 1617 ETQSQ----WGQPSGKKSRPEGSRGWG--------SNNTEWKNKKNRPNKPQGPLND--D 1662

Query: 519  WSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLD 698
            +SA GIFTATRQR+D FTSEEQ+IL DVEPI+QSI+RIMHQ+ YNDGDPL+ADDQSY+LD
Sbjct: 1663 YSAGGIFTATRQRVDIFTSEEQDILLDVEPIMQSIRRIMHQAGYNDGDPLSADDQSYILD 1722

Query: 699  HVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKY 878
             VFN HPDK  KMG+G++YVMV++HSSF ++RCFY+VSTDGH+EDFSYRKC+ENFIK+KY
Sbjct: 1723 KVFNNHPDKAVKMGTGIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKY 1782

Query: 879  PGMAESFIKKYFRKPRSG-----NPAPEEG 953
            P  AE+FI KYFR+PR+G     +  PE+G
Sbjct: 1783 PDNAETFIGKYFRRPRAGGNRERSVIPEDG 1812


>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
            sativus]
          Length = 1959

 Score =  265 bits (677), Expect = 4e-68
 Identities = 146/344 (42%), Positives = 200/344 (58%), Gaps = 30/344 (8%)
 Frame = +3

Query: 9    PSQSSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPSEESPRYGGWNINESQKRP 188
            P  S     D WG     D    +  + +S    W    + +E S  +G   +   QK  
Sbjct: 1597 PEASQGFGNDAWGQQKSRDVIKPSLANNESNLSGWGSQIESNEGSD-HGFDQVTNEQKSS 1655

Query: 189  QV------EEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSEESPSYG----- 335
                    E+  + W +  + EA  + G+QND    WGQ + +  + S ES         
Sbjct: 1656 DTRGWDSQEKTDKPWDKQKSLEASQSWGSQNDSLGSWGQPQRASEECSRESQDDSSTQFS 1715

Query: 336  ---------GWNIRKSEKRPCDAWGQ-RDGEEGTG--GWNKSE--GKSQSSNAGDWKIKK 473
                     GW  +KS +     WG  ++  E T   GW+K     K    NAG+WK +K
Sbjct: 1716 QLKPPETSLGWEQQKSPE-VSHGWGSHKESSEQTSSHGWDKKNQGSKGWGGNAGEWKNRK 1774

Query: 474  GRAAMSPGKFDDRNDWSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYN 653
             R   SPG  +D  D +   ++TA+ QRLD FTSEEQ+IL+D+EPI+QSI+++MHQS YN
Sbjct: 1775 NRPPKSPGMSND--DANLRALYTASGQRLDMFTSEEQDILADIEPIMQSIRKVMHQSGYN 1832

Query: 654  DGDPLTADDQSYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHRED 833
            DGDPL+A+DQS+VL  VFN+HPDK  KMG+G+++ MV++HSSFQ++RCFY+V+TDGH+ED
Sbjct: 1833 DGDPLSAEDQSFVLQSVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCFYVVTTDGHKED 1892

Query: 834  FSYRKCMENFIKDKYPGMAESFIKKYFRKPRSG-----NPAPEE 950
            FSYRKC++NFIK KYP +AE F+ KYFRKPR       NPA EE
Sbjct: 1893 FSYRKCLDNFIKGKYPDLAEMFVAKYFRKPRPNRNRDRNPASEE 1936


>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
            1-like [Cucumis sativus]
          Length = 2019

 Score =  265 bits (677), Expect = 4e-68
 Identities = 146/344 (42%), Positives = 200/344 (58%), Gaps = 30/344 (8%)
 Frame = +3

Query: 9    PSQSSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPSEESPRYGGWNINESQKRP 188
            P  S     D WG     D    +  + +S    W    + +E S  +G   +   QK  
Sbjct: 1657 PEASQGFGNDAWGQQKSRDVIKPSLANNESNLSGWGSQIESNEGSD-HGFDQVTNEQKSS 1715

Query: 189  QV------EEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSEESPSYG----- 335
                    E+  + W +  + EA  + G+QND    WGQ + +  + S ES         
Sbjct: 1716 DTRGWDSQEKTDKPWDKQKSLEASQSWGSQNDSLGSWGQPQRASEECSRESQDDSSTQFS 1775

Query: 336  ---------GWNIRKSEKRPCDAWGQ-RDGEEGTG--GWNKSE--GKSQSSNAGDWKIKK 473
                     GW  +KS +     WG  ++  E T   GW+K     K    NAG+WK +K
Sbjct: 1776 QLKPPETSLGWEQQKSPE-VSHGWGSNKESSEQTSSHGWDKKNQGSKGWGGNAGEWKNRK 1834

Query: 474  GRAAMSPGKFDDRNDWSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYN 653
             R   SPG  +D  D +   ++TA+ QRLD FTSEEQ+IL+D+EPI+QSI+++MHQS YN
Sbjct: 1835 NRPPKSPGMSND--DANLRALYTASGQRLDMFTSEEQDILADIEPIMQSIRKVMHQSGYN 1892

Query: 654  DGDPLTADDQSYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHRED 833
            DGDPL+A+DQS+VL  VFN+HPDK  KMG+G+++ MV++HSSFQ++RCFY+V+TDGH+ED
Sbjct: 1893 DGDPLSAEDQSFVLQSVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCFYVVTTDGHKED 1952

Query: 834  FSYRKCMENFIKDKYPGMAESFIKKYFRKPRSG-----NPAPEE 950
            FSYRKC++NFIK KYP +AE F+ KYFRKPR       NPA EE
Sbjct: 1953 FSYRKCLDNFIKGKYPDLAEMFVAKYFRKPRPNRNRDRNPASEE 1996


>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
            gi|557522591|gb|ESR33958.1| hypothetical protein
            CICLE_v10004129mg [Citrus clementina]
          Length = 1867

 Score =  252 bits (644), Expect = 2e-64
 Identities = 140/329 (42%), Positives = 195/329 (59%), Gaps = 25/329 (7%)
 Frame = +3

Query: 39   TWGTLA--EADKTGQNKNDGKSQWGQ--------WKDSAKPSEESP----RYGGWNINES 176
            +W T A  + D  G    +  S WG         W+DS+KPS        + GGWN+ ++
Sbjct: 1553 SWNTKALDKLDDVGSAVENSSSVWGAREDFSTKGWEDSSKPSANEKSIVHQIGGWNVPDA 1612

Query: 177  QKRPQVEEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSEESP-SYGGWNIRK 353
            +          +WG+       +T   +   +  WG  ++ HT+     P S   W++  
Sbjct: 1613 KGTDD-----SSWGKQ-----KLTENAKGTDDSSWG--KQKHTENESSQPASSNAWDLPD 1660

Query: 354  S---EKRPCDAWGQRDGEEGTGGWNKSEGKSQSSNAGDWKIKKGRAAMSPGKFDDRNDWS 524
            +    +     WGQ   E     + K+ G + SS  G+WK KK R   SPG  +D  D +
Sbjct: 1661 ATGGSETEMQVWGQSRKEP----FKKNRGWASSS--GEWKGKKNRPPRSPGVVND--DST 1712

Query: 525  ASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDHV 704
             + ++T TRQRLD FTSEEQ+ILSDVEPI++SI+RIMHQS YNDGD L+ADD+S++ D+V
Sbjct: 1713 VNAMYTVTRQRLDMFTSEEQDILSDVEPIMRSIRRIMHQSGYNDGDRLSADDKSFIFDNV 1772

Query: 705  FNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPG 884
            FNYHPDK  KMG+G+++  V+KH SFQD+RC ++VSTDG ++DFSYRKC+E+FI+ KYP 
Sbjct: 1773 FNYHPDKAMKMGAGIDHFKVDKHGSFQDSRCLFVVSTDGSQQDFSYRKCLESFIRGKYPE 1832

Query: 885  MAESFIKKYFRKPRSGN-------PAPEE 950
              + FI KYFR+PRSG        P PEE
Sbjct: 1833 FVDEFIGKYFRRPRSGGNREPSLPPVPEE 1861


>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
            gi|550343552|gb|EEE78905.2| hypothetical protein
            POPTR_0003s19630g [Populus trichocarpa]
          Length = 1920

 Score =  252 bits (644), Expect = 2e-64
 Identities = 150/332 (45%), Positives = 193/332 (58%), Gaps = 18/332 (5%)
 Frame = +3

Query: 6    WPSQSSDPSADTWGTLAEADKTGQNKNDGKSQ-WGQWKDSAKPSEE--SPRYGGWN---I 167
            W ++ +   ADT      A   G+ K+   SQ WG  K+S K   E   P   G N    
Sbjct: 1600 WGNKVTSNQADT------ASGWGKPKSSENSQGWGLSKESGKEVHEWGVPNSAGGNGSET 1653

Query: 168  NESQKRPQVEEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSEESPSYGGWNI 347
            N + +   + E G+  G      ++  G     G P+     E    P E   +  GW +
Sbjct: 1654 NNNNENQSLVEQGKESGWDNKASSNQEGTASGWGKPKSPALSEGWGSPREPVKAVHGWGV 1713

Query: 348  RKSE----KRPCDAWGQRDGE------EGTGGWNKSEGKSQSSNAGDWKIKKGRAAMSPG 497
              S           WGQ+  E      EG+ GW         SN GDWK K+ R    P 
Sbjct: 1714 PNSGGGNGSGRDQQWGQQSREFKKDRFEGSRGWG--------SNNGDWKNKRNR----PS 1761

Query: 498  KFDDRNDWSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTAD 677
            K     D +ASGIFT TRQRLD FTS+EQ+ILSD+EP++ SI+RIMHQ+ YNDGDPL+AD
Sbjct: 1762 K--PHEDLNASGIFTTTRQRLDVFTSQEQDILSDIEPLMLSIRRIMHQTGYNDGDPLSAD 1819

Query: 678  DQSYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCME 857
            DQSYVLD+VF+YHPDK  KMG+G+++V V++HS+FQ++RCFYIVSTDG ++DFSYRKC+E
Sbjct: 1820 DQSYVLDNVFHYHPDKAVKMGAGIDHVTVSRHSNFQESRCFYIVSTDGCKQDFSYRKCLE 1879

Query: 858  NFIKDKYPGMAESFIKKYF--RKPRSGNPAPE 947
            NFIK KYP +A+ FI KYF  R  R   PAPE
Sbjct: 1880 NFIKGKYPDLADEFIAKYFARRGNRQRTPAPE 1911


>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
            sinensis]
          Length = 1865

 Score =  249 bits (635), Expect = 3e-63
 Identities = 139/329 (42%), Positives = 194/329 (58%), Gaps = 25/329 (7%)
 Frame = +3

Query: 39   TWGTLA--EADKTGQNKNDGKSQWGQ--------WKDSAKPSEESP----RYGGWNINES 176
            +W T A  + D  G    +  S WG         W+DS+KPS        + GGWN+ ++
Sbjct: 1551 SWKTKALDKLDDVGSAVENSSSVWGAREDFSTKGWEDSSKPSANEKSIVHQIGGWNVPDA 1610

Query: 177  QKRPQVEEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSEESP-SYGGWNIRK 353
            +           WG+       +T   +   +  WG  ++ HT+     P S   W++  
Sbjct: 1611 KGTDD-----SCWGKQ-----KLTENAKGTDDSSWG--KQKHTENESPQPASSNAWDLPD 1658

Query: 354  S---EKRPCDAWGQRDGEEGTGGWNKSEGKSQSSNAGDWKIKKGRAAMSPGKFDDRNDWS 524
            +    +     WGQ   E     + K+ G + SS  G+WK KK R   SPG  +D  D +
Sbjct: 1659 ATGGSETEMQVWGQSRKEP----FKKNRGWASSS--GEWKGKKNRPPRSPGVVND--DST 1710

Query: 525  ASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDHV 704
             + ++T TRQRLD FTSEEQ+ILS VEPI++SI+RIMHQS YNDGD L+ADD+S++ D+V
Sbjct: 1711 VNAMYTVTRQRLDMFTSEEQDILSHVEPIMRSIRRIMHQSGYNDGDRLSADDKSFIFDNV 1770

Query: 705  FNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPG 884
            FNYHPDK  KMG+G+++  V+KH SFQD+RC ++VSTDG ++DFSYRKC+E+FI+ KYP 
Sbjct: 1771 FNYHPDKAMKMGAGIDHFKVDKHGSFQDSRCLFVVSTDGSQQDFSYRKCLESFIRGKYPD 1830

Query: 885  MAESFIKKYFRKPRSGN-------PAPEE 950
            + + FI KYFR+PRSG        P PEE
Sbjct: 1831 LVDEFIGKYFRRPRSGGNREPSLPPVPEE 1859


>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
            [Theobroma cacao] gi|590569189|ref|XP_007011000.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao]
          Length = 1788

 Score =  246 bits (627), Expect = 2e-62
 Identities = 139/319 (43%), Positives = 185/319 (57%), Gaps = 39/319 (12%)
 Frame = +3

Query: 93   KSQWGQW-KDSAKPSEESPRYGGWNINESQK---------------------RPQVEEPG 206
            +++WG W K  +K  + SP+  G  +NE  K                     +    + G
Sbjct: 1456 ETEWGDWGKGKSKTQDVSPKVDGTCVNEQTKLSDWGLKKNDTQDVSMEEKTFKSNGADTG 1515

Query: 207  ETWGRHGTEEADVTGGNQNDGNPQ--WGQWRESHTKPSEESPSYGGWNIRKSEKRPCDAW 380
             +WG  G E       + ND  P   WG      TK  ++S    GW  +KS +     W
Sbjct: 1516 TSWGTMGKESEKP---DANDALPWSGWGTQDVIPTKTLDDSSKSSGWEQQKSPECS-QGW 1571

Query: 381  GQRDGEE---GTGGWNKSEG--KSQSSNAGDWKIKKG--RAAMSPGKFDD--------RN 515
            G  D       + GW+   G   +QS     W   +G  R A    K +          +
Sbjct: 1572 GSLDESNQPASSNGWDTPNGLGSTQSEKQHQWGQSRGSRRWASDASKKNHPVKSARVMND 1631

Query: 516  DWSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVL 695
            D S + ++TATRQRLD FTSEEQ+ILSDVEP++QSI++IMHQS YNDGDPL+A DQS++L
Sbjct: 1632 DSSMAAMYTATRQRLDMFTSEEQDILSDVEPLMQSIRKIMHQSGYNDGDPLSALDQSFIL 1691

Query: 696  DHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDK 875
            ++VF +HPDK  KMG+GV+YVMV+KHS+F D+RCFY+VSTDG ++DFSYRKC++NFIK K
Sbjct: 1692 ENVFTHHPDKAIKMGAGVDYVMVSKHSNFPDSRCFYVVSTDGRKQDFSYRKCLDNFIKGK 1751

Query: 876  YPGMAESFIKKYFRKPRSG 932
            YP MA+ FI KYFRKPR G
Sbjct: 1752 YPDMADVFIAKYFRKPRFG 1770


>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
            vesca subsp. vesca]
          Length = 1991

 Score =  245 bits (625), Expect = 4e-62
 Identities = 137/321 (42%), Positives = 188/321 (58%), Gaps = 10/321 (3%)
 Frame = +3

Query: 6    WPSQSS-DPSADTWGTLAEADKT----GQNKNDGKSQ--WGQWKDSAKPSEESPRYGGWN 164
            W  Q S D S  TW     A+ +    GQ K+   SQ  WG  K ++  S+     G W 
Sbjct: 1671 WERQKSPDTSKGTWEQPKSAEMSHGAWGQQKSPDVSQGVWGLEKPASTNSQ-----GSWG 1725

Query: 165  INESQKRPQVEEPGETWGRHGTEE-ADVTGGNQNDGNPQWGQWRESHTKPSEESPSYGGW 341
                QK P++  P   WG+  + + +  T G Q       G W +     + +  +   W
Sbjct: 1726 ---QQKSPEI--PQGNWGQQTSPDISQGTWGQQKSPEMSQGSWGQQKPSDTSQPATVNQW 1780

Query: 342  NIRKSEKRPCDAWGQRDGEEGTGGWNK--SEGKSQSSNAGDWKIKKGRAAMSPGKFDDRN 515
            +   S+        Q+ G  G     K    G+S   NAG+WK K  R A SPG  +D  
Sbjct: 1781 D---SQSEAAVERHQQWGHNGDSNKRKRFEGGRSWGPNAGEWKGKNSRPAKSPGMVND-- 1835

Query: 516  DWSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVL 695
            D S + I+TATRQRLD FTSEEQ++LS +EP + SI+RIMHQS YNDGD L+A+D S++L
Sbjct: 1836 DSSVAAIYTATRQRLDIFTSEEQDVLSHIEPTMLSIRRIMHQSGYNDGDQLSAEDHSFIL 1895

Query: 696  DHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDK 875
            D VFN+HP+K  KMGSG++Y  V++H SFQ++RC +++STDG +EDFSYRKC++N IK+K
Sbjct: 1896 DKVFNFHPEKEAKMGSGIDYFTVDRHGSFQESRCLFVISTDGRKEDFSYRKCLQNMIKEK 1955

Query: 876  YPGMAESFIKKYFRKPRSGNP 938
            YP +AE+F  KYF +PR  NP
Sbjct: 1956 YPELAEAFNDKYFSRPRPRNP 1976


>ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
            gi|462415343|gb|EMJ20080.1| hypothetical protein
            PRUPE_ppa000088mg [Prunus persica]
          Length = 1855

 Score =  240 bits (612), Expect = 1e-60
 Identities = 134/321 (41%), Positives = 186/321 (57%), Gaps = 14/321 (4%)
 Frame = +3

Query: 18   SSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPSEESPRYGGWNINESQ------ 179
            + + +  TWGT   ++     +  G         S K S        W  N ++      
Sbjct: 1523 AKENTTSTWGTTTASENDWCGRGVGHDDSASL--SGKKSSVLNTSSVWATNTAREDATSA 1580

Query: 180  --KRPQVEEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSEESPSYGGWNIRK 353
              K P  E    TWG     E D  G       P   Q     TKP ++S S  GW+   
Sbjct: 1581 WGKNPAKENTTSTWGTTTASENDWCGREAGKVEPVDLQ----PTKPQDDSASLSGWDSPT 1636

Query: 354  SEKRPCDA---WGQRDGEEGTGGWNKSEG-KSQSSNAGDWKIKKGRAAMSPGKFDDRNDW 521
             +    +    WGQ  G++     N+ EG ++  S+ G+WK  K R   SPG  +D +  
Sbjct: 1637 GDGNSGERNHQWGQHRGDQTKK--NRFEGARNWVSSPGEWK-NKNRPPKSPGMVNDNSTM 1693

Query: 522  SASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDH 701
             A  ++T TRQRLD FTSEEQ++LS++EP+++S++RIMHQS YNDGDPL+ DDQS+VLD+
Sbjct: 1694 GA--LYTVTRQRLDMFTSEEQDVLSNIEPVMRSLRRIMHQSGYNDGDPLSGDDQSFVLDN 1751

Query: 702  VFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYP 881
            VFNYHPDK  KMG G++++ VN+H SFQD+RCF++VSTDG  EDFSYRKC++N+I++K+P
Sbjct: 1752 VFNYHPDKAAKMGCGIDHLTVNRHGSFQDSRCFFVVSTDGRTEDFSYRKCLDNYIREKFP 1811

Query: 882  GMAESFIKKYF--RKPRSGNP 938
             +AE+FI KYF  R  R  NP
Sbjct: 1812 DLAETFIGKYFSRRGNRERNP 1832


>gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
          Length = 2054

 Score =  236 bits (601), Expect = 2e-59
 Identities = 139/361 (38%), Positives = 198/361 (54%), Gaps = 51/361 (14%)
 Frame = +3

Query: 3    QWPSQSSDPS---ADTWGTLAEADKTGQNKNDGKSQWGQWKD---------SAKPSEESP 146
            +W    SD +   +  W T ++  KT       K+ W  W           S K  ++ P
Sbjct: 1664 RWSKADSDNTHAKSTDWNTTSDRTKTMT-----KNTWSGWHGEKSEKEDILSTKSQQDLP 1718

Query: 147  RYGGWN---------------INESQKRP-QVEEPGETWGRHGTEEADVTGGNQNDGNPQ 278
            R   W                +++ Q  P QV EP + W    T +  V+G   ++    
Sbjct: 1719 RNSDWGAVSNRENNAERAYEFVSKDQPLPDQVSEPCD-WDNKLTPQKAVSGWLSSNDEGW 1777

Query: 279  WGQWRESHTKPSEESPS-YGGWNIRKS-------EKRPCDAWGQRDGEEG---------- 404
                  S  K   +SP  Y  W  R S       E    ++W  R G+ G          
Sbjct: 1778 TKDANSSERKEPTDSPVVYNSWEKRTSSEISQNVESASFNSWLPRAGDGGEVEKPNEWVK 1837

Query: 405  -TGGWNKSEGKSQS---SNAGDWKIKKGRAAMSPGKFDD-RNDWSASGIFTATRQRLDQF 569
             +G + K+ G++     S++GDWKIKK      PGKF    ND ++  +FT TRQRLD F
Sbjct: 1838 KSGSFKKNHGETSGGWGSDSGDWKIKKNH----PGKFPRMNNDNTSVRLFTETRQRLDLF 1893

Query: 570  TSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDHVFNYHPDKTTKMGSGV 749
            TSEEQ+ LS +EP ++SI+RIMH+S YNDGDP+  +DQS+++D+VFNYHPDK  KMGSG+
Sbjct: 1894 TSEEQDALSLIEPTMKSIRRIMHKSGYNDGDPIRPEDQSFIIDNVFNYHPDKAAKMGSGI 1953

Query: 750  NYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKPRS 929
            +++M+++HSSFQD+RC Y+VSTDG +EDFSYRKC+ N IK ++P +A+ F+ KYFRKP+ 
Sbjct: 1954 DHLMISRHSSFQDSRCLYVVSTDGRKEDFSYRKCLGNLIKSRFPDVADEFLDKYFRKPKP 2013

Query: 930  G 932
            G
Sbjct: 2014 G 2014


>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
          Length = 2082

 Score =  234 bits (598), Expect = 5e-59
 Identities = 130/330 (39%), Positives = 176/330 (53%), Gaps = 28/330 (8%)
 Frame = +3

Query: 24   DPSADTWGTLAEADKTGQNKNDGKSQWG------------QWKDSAKPSEESPRYGG--- 158
            D   D+WG+    DK  Q  N G   WG            +W    K   E P  G    
Sbjct: 1713 DNVQDSWGSGKRKDKVTQEDNSGSGGWGANRTDLAKSKSSEWSSWGKNKSEIPAGGSENV 1772

Query: 159  ----WNINESQKRPQVEEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSEESP 326
                W   + +   Q E  G  W R+  E  D  GG++    PQ   W   + K   +  
Sbjct: 1773 QNDSWGSGKLEDDTQKENSGSAWVRNKAETID--GGSEK---PQEDAWNSGNWKAESKVG 1827

Query: 327  SYGGWNIRKSEKRPCDAWGQRDGEEGTGGWNK--SEGKSQSSNAGDW------KIKKGRA 482
            +      + SE +  D+  Q +    + GW    +   S+S     W        KK R 
Sbjct: 1828 NASWGKPKSSESQAWDSHNQSNQNSSSQGWESHIASANSESEKGFQWGKQGRDSFKKNRF 1887

Query: 483  AMSPGKFDDRNDW-SASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDG 659
              S G+  +  DW + +    A  QRLD ++S EQ++L D+EPI+QSI+RIM Q  YNDG
Sbjct: 1888 EGSQGRGSNAGDWKNRNRPPRAPGQRLDIYSSGEQDVLKDIEPIMQSIRRIMQQQGYNDG 1947

Query: 660  DPLTADDQSYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFS 839
            DPL A+DQ +VL++VF +HPDK TKMG+G++YVMVNKHSSFQ++RCFY+V  DG  +DFS
Sbjct: 1948 DPLAAEDQLFVLENVFEHHPDKETKMGTGIDYVMVNKHSSFQESRCFYVVCKDGESKDFS 2007

Query: 840  YRKCMENFIKDKYPGMAESFIKKYFRKPRS 929
            YRKC+ N+I  KYP +AESF+ KYFRKPR+
Sbjct: 2008 YRKCLANYISKKYPDLAESFLGKYFRKPRA 2037


>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
          Length = 2020

 Score =  228 bits (581), Expect = 5e-57
 Identities = 128/332 (38%), Positives = 178/332 (53%), Gaps = 35/332 (10%)
 Frame = +3

Query: 39   TWGTLAEADKTGQNKNDGKSQWG------------QWKDSAKPSEESPRYGGWNI----- 167
            +WG+    DK  Q  N G   WG            +W    K   E P  G  N+     
Sbjct: 1668 SWGSGKRKDKVTQEDNSGSGDWGANRTDLAITKSSEWSSWGKNKTEIPAGGSANVQNDSW 1727

Query: 168  -----NESQKRPQV-----EEPGETWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKPSE 317
                 N++QK         E  G  W R+  E  D  GG++    PQ   W   + K   
Sbjct: 1728 GLGKLNDTQKDNSGCGAWGENSGSAWVRNKAETID--GGSEK---PQEDAWNSGNWKAES 1782

Query: 318  ESPSYGGWNIRKSEKRPCDAWGQRDGEEGTGGWNKSEGKSQSSNAGDWKIKKGRAAMSPG 497
            +  +      + SE    D+  Q +    + GW      + S N   ++  KGR +    
Sbjct: 1783 KVGNTTWGKPKSSESHAWDSHNQSNQNSSSQGWESHIASANSENEKGFQWGKGRDSFKKN 1842

Query: 498  KFD-------DRNDW-SASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYN 653
            +F+       +  DW + +    A  QRLD ++SEEQ++L D+EPI+QSI+RIM Q  Y+
Sbjct: 1843 RFEGSQGRGSNAGDWKNRNRPPRAPGQRLDIYSSEEQDVLKDIEPIMQSIRRIMQQQGYS 1902

Query: 654  DGDPLTADDQSYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHRED 833
            DGDPL A+DQ +VL++VF +HPDK TKMG+G++YVMVNKHSSFQ++RCFY+V  DG  +D
Sbjct: 1903 DGDPLAAEDQLFVLENVFEHHPDKETKMGAGIDYVMVNKHSSFQESRCFYVVCKDGQSKD 1962

Query: 834  FSYRKCMENFIKDKYPGMAESFIKKYFRKPRS 929
            FSYRKC+ N+I  KYP +AESF+ KYFRKPR+
Sbjct: 1963 FSYRKCLANYISKKYPDLAESFLGKYFRKPRA 1994


>ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phaseolus vulgaris]
            gi|561006762|gb|ESW05756.1| hypothetical protein
            PHAVU_011G206900g [Phaseolus vulgaris]
          Length = 2052

 Score =  228 bits (580), Expect = 6e-57
 Identities = 134/353 (37%), Positives = 192/353 (54%), Gaps = 46/353 (13%)
 Frame = +3

Query: 9    PSQSSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPSEESPRYGGWNINESQKRP 188
            P+  S+   D+WG+    D T  + +   S  G  KD    +  S  + GW  N+S+   
Sbjct: 1669 PAGGSENVQDSWGSGTRKDVTQVDTSVSGSWGGSRKDQTNTT--SNEWAGWGRNKSEIPA 1726

Query: 189  ----QVEEPGETWGRHGTEEADVTGGNQNDGNPQWG------------QWRESHTKPSE- 317
                 V+E  ++WG  G  + DVT    N G+  WG            +W  +  + ++ 
Sbjct: 1727 GGCETVQE--DSWGS-GKLKDDVTQ-KDNSGSGAWGANKTGLTKTEVDEWARNKVETADG 1782

Query: 318  -----ESPSYGGWNIRKSEKRPCDAWGQRDGEEGTGGWNKSEGKSQSSNAGDWK------ 464
                 +  S+   N++   K    +WG +    G+  W+     +Q+S++  W+      
Sbjct: 1783 GSEKLQEDSWNSGNLKSESKVGNASWG-KPNSSGSQSWDSHNQSNQNSSSRGWESHIASA 1841

Query: 465  -----------------IKKGRAAMSPGKFDDRNDWSASGIFTATR-QRLDQFTSEEQNI 590
                              KK R   S G+  +  DW        T  QRLD ++SEEQ++
Sbjct: 1842 NSDSEKGFQWGKQGRESFKKNRFEGSQGRGSNSGDWKNRNRPPRTPGQRLDLYSSEEQDV 1901

Query: 591  LSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDHVFNYHPDKTTKMGSGVNYVMVNK 770
            L ++EPI+QSI+RIM Q  YNDGDPL ADDQ +VL++VF +HPDK TKMG+G++YVMVNK
Sbjct: 1902 LKEIEPIMQSIRRIMQQQGYNDGDPLAADDQLFVLENVFEHHPDKDTKMGAGIDYVMVNK 1961

Query: 771  HSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKPRS 929
            HSSFQD+RCFY+V  DG REDFSYRKC++N+I+ KYP +AESF  KYFRKPR+
Sbjct: 1962 HSSFQDSRCFYVVLKDGRREDFSYRKCLDNWIRKKYPELAESFFGKYFRKPRN 2014


>gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus guttatus]
          Length = 2113

 Score =  223 bits (569), Expect = 1e-55
 Identities = 135/343 (39%), Positives = 190/343 (55%), Gaps = 38/343 (11%)
 Frame = +3

Query: 12   SQSSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAK----PSEESPRYGGWNINESQ 179
            S +      TWG +    KT Q +N  KS WG   D+A     PS +S   G W+   + 
Sbjct: 1719 SSAQKGEQSTWGHV----KTSQTQN--KSTWGG--DTAPIENVPSPKSQEDGLWSSASAA 1770

Query: 180  KRPQV-----------------EEPGETWGRHGT----EEADVTGGNQNDGNPQWGQWRE 296
            ++ Q                   EP  TWG        +    TG N  + +P    W  
Sbjct: 1771 QKEQDGSKDNNPWQTKVAEQANSEPLSTWGSSSDWVKPDSQTPTGDNTKNESP----WSS 1826

Query: 297  SHTKPSEESPSYGGWNIRK------SEKRPCDAWGQRDGEEGTGGWNKSEGKSQSSNAG- 455
            S  K   +S    GW   K      ++++P   WG+  G     GW +  G+ +  + G 
Sbjct: 1827 SQ-KLLNDSTDSQGWGSSKVDTANDNDEQP--QWGRGRGRGRGRGWGRGVGRGREGSQGR 1883

Query: 456  ------DWKIKKGRAAMSPGKFDDRNDWSASGIFTATRQRLDQFTSEEQNILSDVEPILQ 617
                  DWK K+     S G  DD N   A GIFTA+RQRLD FT+EEQ +L + E I++
Sbjct: 1884 GPTNDRDWKNKR-----SGGPVDDPN---APGIFTASRQRLDSFTAEEQEVLLETETIMK 1935

Query: 618  SIKRIMHQSRYNDGDPLTADDQSYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRC 797
            +I+R+MHQ+ YNDGDPL+ADDQ Y++D+V N+HP+K+ K+G+G++++MVNKHS FQ +RC
Sbjct: 1936 NIRRVMHQTGYNDGDPLSADDQKYIVDNVLNHHPEKSLKIGAGLDHIMVNKHSEFQMSRC 1995

Query: 798  FYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKPR 926
             Y V+ DG + DFSYRKC++NFI+ KYP +AESFI KYF+KP+
Sbjct: 1996 LYAVTIDGSKADFSYRKCLDNFIRGKYPDVAESFIAKYFKKPQ 2038


>ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|355521872|gb|AET02326.1| Protein
            DCL [Medicago truncatula]
          Length = 481

 Score =  221 bits (562), Expect = 8e-55
 Identities = 132/358 (36%), Positives = 192/358 (53%), Gaps = 45/358 (12%)
 Frame = +3

Query: 12   SQSSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPS-EESPRYGGW-----NINE 173
            SQ     +  WG       T    ND +S WGQ KD      E+S R   W     N+ +
Sbjct: 74   SQKDSQKSSAWGA------TKPKSNDNRSSWGQKKDEIHVMPEDSSRSNAWEQKPENVKD 127

Query: 174  S------------------QKRP--QVEEPGETWGRHGTEEADVTGGNQNDGNPQWGQWR 293
            S                  + RP     EP  ++G+  ++E +    ++N+ +  WG+ +
Sbjct: 128  SWVAKVPVANSSWGKAKSPENRPWDSKNEPNNSFGKPNSQENE-PWDSKNESDSSWGKPK 186

Query: 294  ESHTKP-SEESPSYGGWNIRKS-EKRPCDAWGQRDGEEGTGGWNK--SEGKSQSSNAGDW 461
               ++P   ++ S   W   KS E  P D+  + +   G+ GW+   +   S+S  +  W
Sbjct: 187  SQESQPWDSKNESNSSWGKPKSQENHPWDSKNESNQTAGSRGWDSQVASANSESDKSFQW 246

Query: 462  KIKKGRAAMSPGKFD-------DRNDW-SASGIFTATRQRLDQFTSEEQNILSDVEPILQ 617
              K+GR +    +F+       +  DW + S       QR + +T EEQ+I+ D+EPI+Q
Sbjct: 247  G-KQGRDSFKKNRFEGSQSGGPNAGDWKNRSRPVRPPGQRFELYTPEEQDIMKDIEPIVQ 305

Query: 618  SIKRIMHQSRYNDGDPLTADDQSYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRC 797
            SI+RIM    YNDGDPL  +DQ YVL++VF +HPDK TKMG GV++VMV+KHS+FQD+RC
Sbjct: 306  SIRRIMQLQGYNDGDPLANEDQKYVLENVFEHHPDKETKMGVGVDHVMVSKHSNFQDSRC 365

Query: 798  FYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKP-------RSGNPAPEE 950
             Y+V  DG +EDFSYRKC+EN ++ KYP  AESF  KYFRKP       ++ NPA E+
Sbjct: 366  LYVVLKDGKKEDFSYRKCLENLVRKKYPETAESFCGKYFRKPQPRVKRDQTPNPAGEQ 423


>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
            gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
            subunit [Medicago truncatula]
          Length = 2032

 Score =  221 bits (562), Expect = 8e-55
 Identities = 132/358 (36%), Positives = 192/358 (53%), Gaps = 45/358 (12%)
 Frame = +3

Query: 12   SQSSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPS-EESPRYGGW-----NINE 173
            SQ     +  WG       T    ND +S WGQ KD      E+S R   W     N+ +
Sbjct: 1625 SQKDSQKSSAWGA------TKPKSNDNRSSWGQKKDEIHVMPEDSSRSNAWEQKPENVKD 1678

Query: 174  S------------------QKRP--QVEEPGETWGRHGTEEADVTGGNQNDGNPQWGQWR 293
            S                  + RP     EP  ++G+  ++E +    ++N+ +  WG+ +
Sbjct: 1679 SWVAKVPVANSSWGKAKSPENRPWDSKNEPNNSFGKPNSQENE-PWDSKNESDSSWGKPK 1737

Query: 294  ESHTKP-SEESPSYGGWNIRKS-EKRPCDAWGQRDGEEGTGGWNK--SEGKSQSSNAGDW 461
               ++P   ++ S   W   KS E  P D+  + +   G+ GW+   +   S+S  +  W
Sbjct: 1738 SQESQPWDSKNESNSSWGKPKSQENHPWDSKNESNQTAGSRGWDSQVASANSESDKSFQW 1797

Query: 462  KIKKGRAAMSPGKFD-------DRNDW-SASGIFTATRQRLDQFTSEEQNILSDVEPILQ 617
              K+GR +    +F+       +  DW + S       QR + +T EEQ+I+ D+EPI+Q
Sbjct: 1798 G-KQGRDSFKKNRFEGSQSGGPNAGDWKNRSRPVRPPGQRFELYTPEEQDIMKDIEPIVQ 1856

Query: 618  SIKRIMHQSRYNDGDPLTADDQSYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRC 797
            SI+RIM    YNDGDPL  +DQ YVL++VF +HPDK TKMG GV++VMV+KHS+FQD+RC
Sbjct: 1857 SIRRIMQLQGYNDGDPLANEDQKYVLENVFEHHPDKETKMGVGVDHVMVSKHSNFQDSRC 1916

Query: 798  FYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKP-------RSGNPAPEE 950
             Y+V  DG +EDFSYRKC+EN ++ KYP  AESF  KYFRKP       ++ NPA E+
Sbjct: 1917 LYVVLKDGKKEDFSYRKCLENLVRKKYPETAESFCGKYFRKPQPRVKRDQTPNPAGEQ 1974


>ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer
            arietinum]
          Length = 2263

 Score =  213 bits (543), Expect = 1e-52
 Identities = 128/329 (38%), Positives = 172/329 (52%), Gaps = 29/329 (8%)
 Frame = +3

Query: 27   PSADTWGTLAEADKTGQNKNDGKSQWGQWKD------SAKPSEESPRYGGWNINESQKRP 188
            P   +WG   +A K    K++  S WG+ KD      S K  E+S   G           
Sbjct: 1896 PKMGSWGATKDATKP---KSNDWSSWGKKKDEIHDGGSEKIQEDSWSSGKRKAESKSVAD 1952

Query: 189  QVEEPGE---TWGRHGTEEADVTGGNQNDGNPQWGQWRESHTKP------SEESPSYGGW 341
             ++E      TW     +  D         N  WG+ +    +P      S  + S  GW
Sbjct: 1953 VMQEDSSKSNTWEHKSDDVKDSWDAKVPVANSSWGKPKSQENQPWDSKNESNPTASSRGW 2012

Query: 342  NIR----KSEKRPCDAWGQR----------DGEEGTGGWNKSEGKSQSSNAGDWKIKKGR 479
            + +     S+      WG+           +G +G+ GW         SNAGDWK  K R
Sbjct: 2013 DSQVASANSDSDKNFQWGKPGRESFKKNRFEGSQGSQGWG--------SNAGDWK-NKNR 2063

Query: 480  AAMSPGKFDDRNDWSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDG 659
             A  PG                   RLD ++SEEQ+IL D+EPI+QSI+RIM Q  YNDG
Sbjct: 2064 PARPPGP------------------RLDLYSSEEQDILKDIEPIVQSIRRIMQQQGYNDG 2105

Query: 660  DPLTADDQSYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFS 839
            DPL A+DQ YVL++VF +HPDK TKMG G+++VMV++HS+FQ++RCFY+V  DG +EDFS
Sbjct: 2106 DPLAAEDQQYVLENVFEHHPDKETKMGVGIDHVMVSRHSNFQESRCFYVVLKDGKKEDFS 2165

Query: 840  YRKCMENFIKDKYPGMAESFIKKYFRKPR 926
            YRKC+E+F++ KY   AESF  KYFRKPR
Sbjct: 2166 YRKCLESFVRKKYADTAESFCGKYFRKPR 2194


>ref|XP_006293553.1| hypothetical protein CARUB_v10022497mg [Capsella rubella]
            gi|482562261|gb|EOA26451.1| hypothetical protein
            CARUB_v10022497mg [Capsella rubella]
          Length = 1959

 Score =  213 bits (542), Expect = 2e-52
 Identities = 120/311 (38%), Positives = 179/311 (57%), Gaps = 5/311 (1%)
 Frame = +3

Query: 18   SSDPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPSEESPRYGGWNINESQKRPQVE 197
            +S+PSA  WG+     K       G + WG W    K SE      GW  N  +   + E
Sbjct: 1571 NSEPSA--WGSQG---KKKAETESGPASWGAW--DKKISETESGLAGWG-NGDKINSETE 1622

Query: 198  EPGETWGRHG--TEEADVTGGNQNDGNPQWGQWRESHT--KPSEESPSYGGWNIRKSEKR 365
                 WG  G  +  A     N++DGNP W   +E+ +  K  +E   +G      ++K 
Sbjct: 1623 SGAAAWGSWGQPSPTAADKDTNEDDGNP-WVSLKETKSGEKDEKEKSQWGN----PAKKF 1677

Query: 366  PCDAWGQRDGEEGTGGWNKSEGKSQSSNAGDWKIKKGRAAMSPGKFDDRNDWSASGIFTA 545
            P D           GGW+   G        +W+ K+      P     R++ + + +FTA
Sbjct: 1678 PSDG--------SYGGWSNGGG-------AEWRGKRNHTPRPP-----RSEDNLAPMFTA 1717

Query: 546  TRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDHVFNYHPDK 725
            T+QRLD FTSEEQ +LSDVEP+++++++IMH S Y DG+P++ DD+++VL+ + N+HP+K
Sbjct: 1718 TKQRLDSFTSEEQELLSDVEPVMRTLRKIMHMSGYPDGEPISDDDKTFVLEKILNFHPEK 1777

Query: 726  TTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIK 905
              K+GS V+++ V+KH++F DTRCF++VSTDG ++DFSYRK + N++  KYP  AE FI 
Sbjct: 1778 ERKLGSAVDFITVDKHTTFTDTRCFFVVSTDGAKQDFSYRKSLNNYLMTKYPDRAEEFID 1837

Query: 906  KYFRKPR-SGN 935
            KYF+KPR SGN
Sbjct: 1838 KYFKKPRPSGN 1848


>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
          Length = 1902

 Score =  213 bits (542), Expect = 2e-52
 Identities = 126/330 (38%), Positives = 187/330 (56%), Gaps = 23/330 (6%)
 Frame = +3

Query: 24   DPSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPSEESPRYGGWNINESQKRPQVE-- 197
            D  + +WG+  E D+     ND     G +   AK    S     W+  + +++ Q    
Sbjct: 1556 DGVSSSWGSQKE-DRPQPKSNDRSVGDGNFDKDAKEEGLS----SWDAKKVERKTQSSWG 1610

Query: 198  EPGETWGRHGTEEADVTGG---NQNDGNPQWGQWRESHTKPSEESPSYGGWNIRKSEKRP 368
            +P E+        AD  G    NQ   +  WG    +  K SE+  S+G  N+   +K  
Sbjct: 1611 QPSES-KNSAQSSADHWGSDKSNQPGKSSGWGSEDTNAGKDSEKQDSWGKSNVSTWKKES 1669

Query: 369  CDAWGQRD------GEEGTGGWNKSEGKSQ----SSNAGDWKIKKGRAAMSPGKFDDR-- 512
             +     D      G+ G  GWNK + +      SSN G+WK +K +   +  +  +R  
Sbjct: 1670 GEKLHGSDDSQSPWGQPGGSGWNKKQPEGGRGWGSSNTGEWKSRKNQN-QNQNQNQNRPP 1728

Query: 513  ---NDWSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQ 683
               ND S     TATR+R+D+F +EE+++LS+VE ++QSI+RIMHQS   DG+PL  DDQ
Sbjct: 1729 RGPNDDSPRVALTATRKRMDEFPTEEKDVLSEVESLMQSIRRIMHQSGCVDGEPLLPDDQ 1788

Query: 684  SYVLDHVFNYHPDKTTKMGSGVNYVMVNKHSSFQDTRCFYIVSTDGHREDFSYRKCMENF 863
            +Y++D++ NYHPDK  K+G+GV+++ V KHS+FQ++RCFY+VSTDG   DFSY KC+E F
Sbjct: 1789 TYLIDNILNYHPDKAAKIGAGVDFITVKKHSNFQESRCFYVVSTDGKDTDFSYIKCIETF 1848

Query: 864  IKDKYPGMAESFIKKYFR---KPRSGNPAP 944
            +K KYP +AESF  KYFR   +P+  +P+P
Sbjct: 1849 VKGKYPSVAESFTSKYFRRSQRPQPASPSP 1878



 Score = 75.1 bits (183), Expect = 7e-11
 Identities = 58/207 (28%), Positives = 79/207 (38%), Gaps = 39/207 (18%)
 Frame = +3

Query: 27   PSADTWGTLAEADKTGQNKNDGKSQWGQWKDSAKPSEESPRYGGWNINESQKRPQVEEPG 206
            PS+ T     + D    +   G S WG  KD A P E+S + GGW+   S+++PQ E+  
Sbjct: 1117 PSSGTGWNANKIDTGSGSAEGGWSSWGSKKDQANP-EDSSKTGGWSSGGSKQKPQPEDSS 1175

Query: 207  ETWGRHGTEEADVTGGNQNDGNPQWGQ-----------------------WRESHTK--- 308
            ++ G   ++     G NQ D +P WGQ                       W  S  K   
Sbjct: 1176 KSGGWDASKSWG--GSNQGDPSPVWGQPVKATNDISIENDHGSGSAEGGGWANSGMKKDL 1233

Query: 309  -PSEESPSYGGWNIRKS-----EKRPCDAWGQRDGEEGTGGWNKSEGKS-------QSSN 449
               E S + GGW+  KS      K P  AWG     +   GW KS+ K        +   
Sbjct: 1234 SKQENSSTAGGWDASKSWSGSKPKDPSSAWGAGKKTDDNNGWKKSDSKKDLASGSVEDGG 1293

Query: 450  AGDWKIKKGRAAMSPGKFDDRNDWSAS 530
               W  KK    + P      N W AS
Sbjct: 1294 CSGWGPKKD--LLQPEDSAGENGWGAS 1318



 Score = 63.9 bits (154), Expect = 2e-07
 Identities = 52/205 (25%), Positives = 80/205 (39%), Gaps = 27/205 (13%)
 Frame = +3

Query: 12   SQSSDPSADTWGTLAEADKTGQNKND---GKSQWGQWKDSA-----KPSEESPRYGGWNI 167
            S   DPS   WG   +A      +ND   G ++ G W +S         E S   GGW+ 
Sbjct: 1189 SNQGDPSP-VWGQPVKATNDISIENDHGSGSAEGGGWANSGMKKDLSKQENSSTAGGWDA 1247

Query: 168  NESQKRPQVEEPGETWG-----------RHGTEEADVTGGNQNDGNPQ-WGQWRESHTKP 311
            ++S    + ++P   WG           +    + D+  G+  DG    WG  ++     
Sbjct: 1248 SKSWSGSKPKDPSSAWGAGKKTDDNNGWKKSDSKKDLASGSVEDGGCSGWGPKKD--LLQ 1305

Query: 312  SEESPSYGGWNIRKSE-KRPCDAWGQRDGEEGTGGWNKSEGKSQSSNA------GDWKIK 470
             E+S    GW   KS+ K P  AWG+   E    GW K+  +  S N        D   K
Sbjct: 1306 PEDSAGENGWGASKSKSKEPSSAWGKPAQETDNIGWKKNNPQRDSENLEGTSGWNDKLQK 1365

Query: 471  KGRAAMSPGKFDDRNDWSASGIFTA 545
            + ++     +     DW ++G  TA
Sbjct: 1366 ENKSFSKQSQPASSKDWDSTGNITA 1390


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