BLASTX nr result

ID: Akebia22_contig00008167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00008167
         (630 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300778.1| hypothetical protein POPTR_0002s03950g [Popu...    49   8e-07

>ref|XP_002300778.1| hypothetical protein POPTR_0002s03950g [Populus trichocarpa]
           gi|222842504|gb|EEE80051.1| hypothetical protein
           POPTR_0002s03950g [Populus trichocarpa]
          Length = 190

 Score = 49.3 bits (116), Expect(2) = 8e-07
 Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
 Frame = -3

Query: 529 KLKPARKAWKNFKSTLEKKLHKLKRPKSINKT---TKRLGNNLAAILHSSRSLPPPRLGR 359
           +L PA+KAWK+F S L++KLHKL   KSI K+   TK + +  + IL   +     R G 
Sbjct: 7   RLPPAKKAWKSFTSKLQRKLHKLNTSKSITKSKYPTKNINSTASHILFDQK-----RDGN 61

Query: 358 KGRVRARPPYAL 323
           + R+ A PP AL
Sbjct: 62  RKRL-AYPPRAL 72



 Score = 30.0 bits (66), Expect(2) = 8e-07
 Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
 Frame = -2

Query: 227 PTMMEIKFID-------MPTWSETSKDGEKGEVSCISSTYGPSV--TVEELHDVDKRAEE 75
           PT   +K +D        P  +    +  +GE  C +     S+     ++  +D+RAE+
Sbjct: 112 PTPKTMKILDHQAATTVAPAGTSMEDEINRGERGCAADDMWESLGFASPQMQGIDERAEQ 171

Query: 74  FIAKFKEDMRLQ 39
           FI  F+ +M +Q
Sbjct: 172 FILTFRAEMEIQ 183


Top