BLASTX nr result
ID: Akebia22_contig00008016
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia22_contig00008016
(412 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007215290.1| hypothetical protein PRUPE_ppa004961mg [Prun... 67 2e-09
ref|XP_004304288.1| PREDICTED: polypyrimidine tract-binding prot... 64 2e-08
gb|EXB31948.1| Polypyrimidine tract-binding protein-1-like prote... 62 8e-08
ref|XP_007032572.1| Polypyrimidine tract-binding protein 1 isofo... 59 5e-07
ref|XP_007032571.1| Polypyrimidine tract-binding protein 1 isofo... 59 5e-07
ref|XP_007032570.1| Polypyrimidine tract-binding protein 1 isofo... 59 5e-07
ref|XP_006384308.1| hypothetical protein POPTR_0004s12210g [Popu... 56 6e-06
gb|ABK95931.1| unknown [Populus trichocarpa] 56 6e-06
>ref|XP_007215290.1| hypothetical protein PRUPE_ppa004961mg [Prunus persica]
gi|462411440|gb|EMJ16489.1| hypothetical protein
PRUPE_ppa004961mg [Prunus persica]
Length = 483
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/46 (69%), Positives = 36/46 (78%)
Frame = -1
Query: 412 QAQVQDGQMTSWDPSMQAGRSTFVSVPSTFPGQAYAPSTHPAYSTA 275
QAQ GQ SWDP+MQAGRSTFVSVPSTFPGQ + S+ P YS+A
Sbjct: 381 QAQGPPGQGPSWDPAMQAGRSTFVSVPSTFPGQTFHASSGPVYSSA 426
>ref|XP_004304288.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
[Fragaria vesca subsp. vesca]
Length = 470
Score = 64.3 bits (155), Expect = 2e-08
Identities = 39/83 (46%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Frame = -1
Query: 394 GQMTSWDPSMQAGRSTFVSVPSTFPGQAYAPST-HPAYSTAXXXXXXXXXHQPD------ 236
GQ+ SWDP+MQAGR +FVSVPSTFPGQ Y S+ P Y++A HQP
Sbjct: 389 GQVPSWDPNMQAGRPSFVSVPSTFPGQIYPTSSGGPVYASAPMPPGSSPMHQPGAPPHMR 448
Query: 235 QGSLGGVSQRMPQHGSQPPYYGQ 167
G R P G+ P YYGQ
Sbjct: 449 PGGASPPGVRPP--GASPSYYGQ 469
>gb|EXB31948.1| Polypyrimidine tract-binding protein-1-like protein [Morus
notabilis]
Length = 484
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/46 (60%), Positives = 34/46 (73%)
Frame = -1
Query: 412 QAQVQDGQMTSWDPSMQAGRSTFVSVPSTFPGQAYAPSTHPAYSTA 275
Q Q+ GQ+ WDP+MQAGRST+VS PSTF GQ Y S+ PAY+ A
Sbjct: 381 QGQIPPGQVPPWDPTMQAGRSTYVSSPSTFRGQNYGASSVPAYAAA 426
>ref|XP_007032572.1| Polypyrimidine tract-binding protein 1 isoform 3 [Theobroma cacao]
gi|508711601|gb|EOY03498.1| Polypyrimidine tract-binding
protein 1 isoform 3 [Theobroma cacao]
Length = 339
Score = 59.3 bits (142), Expect = 5e-07
Identities = 38/93 (40%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Frame = -1
Query: 412 QAQVQDGQMTSWDPSMQAGRSTFVSVPSTFPGQAYAPSTHPAYSTAXXXXXXXXXHQPDQ 233
QAQ GQ+ +WDP++QA R + SVP T P Q+Y S+ P Y A QP
Sbjct: 253 QAQPPAGQVPAWDPNLQA-RPPYGSVPGTVPSQSYQSSSVPTYVNAATPAGSSPLSQP-- 309
Query: 232 GSLGGVSQRMPQHG-----------SQPPYYGQ 167
G S RMPQ G QPPYYGQ
Sbjct: 310 ---GVSSMRMPQPGVNVRPGGAPVPGQPPYYGQ 339
>ref|XP_007032571.1| Polypyrimidine tract-binding protein 1 isoform 2 [Theobroma cacao]
gi|508711600|gb|EOY03497.1| Polypyrimidine tract-binding
protein 1 isoform 2 [Theobroma cacao]
Length = 397
Score = 59.3 bits (142), Expect = 5e-07
Identities = 38/93 (40%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Frame = -1
Query: 412 QAQVQDGQMTSWDPSMQAGRSTFVSVPSTFPGQAYAPSTHPAYSTAXXXXXXXXXHQPDQ 233
QAQ GQ+ +WDP++QA R + SVP T P Q+Y S+ P Y A QP
Sbjct: 311 QAQPPAGQVPAWDPNLQA-RPPYGSVPGTVPSQSYQSSSVPTYVNAATPAGSSPLSQP-- 367
Query: 232 GSLGGVSQRMPQHG-----------SQPPYYGQ 167
G S RMPQ G QPPYYGQ
Sbjct: 368 ---GVSSMRMPQPGVNVRPGGAPVPGQPPYYGQ 397
>ref|XP_007032570.1| Polypyrimidine tract-binding protein 1 isoform 1 [Theobroma cacao]
gi|508711599|gb|EOY03496.1| Polypyrimidine tract-binding
protein 1 isoform 1 [Theobroma cacao]
Length = 466
Score = 59.3 bits (142), Expect = 5e-07
Identities = 38/93 (40%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Frame = -1
Query: 412 QAQVQDGQMTSWDPSMQAGRSTFVSVPSTFPGQAYAPSTHPAYSTAXXXXXXXXXHQPDQ 233
QAQ GQ+ +WDP++QA R + SVP T P Q+Y S+ P Y A QP
Sbjct: 380 QAQPPAGQVPAWDPNLQA-RPPYGSVPGTVPSQSYQSSSVPTYVNAATPAGSSPLSQP-- 436
Query: 232 GSLGGVSQRMPQHG-----------SQPPYYGQ 167
G S RMPQ G QPPYYGQ
Sbjct: 437 ---GVSSMRMPQPGVNVRPGGAPVPGQPPYYGQ 466
>ref|XP_006384308.1| hypothetical protein POPTR_0004s12210g [Populus trichocarpa]
gi|550340880|gb|ERP62105.1| hypothetical protein
POPTR_0004s12210g [Populus trichocarpa]
Length = 473
Score = 55.8 bits (133), Expect = 6e-06
Identities = 33/92 (35%), Positives = 39/92 (42%), Gaps = 13/92 (14%)
Frame = -1
Query: 406 QVQDGQMTSWDPSMQAGRSTFVSVPSTFPGQAYAPSTHPAYSTAXXXXXXXXXHQPDQGS 227
QV GQ+ +WDP+MQAG + SVP T+PGQ Y AY+TA S
Sbjct: 382 QVPPGQVPAWDPTMQAGGQGYASVPGTYPGQTYPTPPASAYATAAIPAGSSPRSHSSPIS 441
Query: 226 LGGVSQRMPQHG-------------SQPPYYG 170
S M G QPPYYG
Sbjct: 442 HSVASMAMSHPGMQSNLRPSGASPPGQPPYYG 473
>gb|ABK95931.1| unknown [Populus trichocarpa]
Length = 473
Score = 55.8 bits (133), Expect = 6e-06
Identities = 33/92 (35%), Positives = 39/92 (42%), Gaps = 13/92 (14%)
Frame = -1
Query: 406 QVQDGQMTSWDPSMQAGRSTFVSVPSTFPGQAYAPSTHPAYSTAXXXXXXXXXHQPDQGS 227
QV GQ+ +WDP+MQAG + SVP T+PGQ Y AY+TA S
Sbjct: 382 QVPPGQVPAWDPTMQAGGQGYASVPGTYPGQTYPTPPASAYATAAIPAGSSPRSHSSPIS 441
Query: 226 LGGVSQRMPQHG-------------SQPPYYG 170
S M G QPPYYG
Sbjct: 442 HSVASMAMSHPGMQSNLRPSGASPPGQPPYYG 473