BLASTX nr result
ID: Akebia22_contig00007362
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia22_contig00007362 (1181 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI29879.3| unnamed protein product [Vitis vinifera] 327 5e-87 ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub... 327 5e-87 ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni... 317 8e-84 ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prun... 313 9e-83 gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus... 309 1e-81 ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 305 3e-80 ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub... 304 4e-80 ref|XP_004299740.1| PREDICTED: DNA-directed RNA polymerase I sub... 303 9e-80 ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub... 293 1e-76 ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobro... 292 2e-76 ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobro... 292 2e-76 ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ... 292 2e-76 ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub... 291 3e-76 ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phas... 291 4e-76 ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub... 291 5e-76 ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub... 290 6e-76 ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citr... 288 3e-75 ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Me... 285 2e-74 ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Popu... 283 1e-73 ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub... 280 1e-72 >emb|CBI29879.3| unnamed protein product [Vitis vinifera] Length = 1669 Score = 327 bits (839), Expect = 5e-87 Identities = 185/329 (56%), Positives = 218/329 (66%), Gaps = 22/329 (6%) Frame = +2 Query: 116 LGVDAQKRRRQATDEMDYEDAXXXXXXXXXXXXQSVGFESEIDQVDVEDDNSVDGEIQIF 295 LG+DAQKR++QA+DEMDY D+ S G EID V+ E + S + E+ I Sbjct: 1349 LGLDAQKRKQQASDEMDYGDSEGEPDEGEP----SAGLTEEIDLVEDEVEISNNEEVGIS 1404 Query: 296 DGEDESRRGPVXXXXXXXXXXXXXXDKEXXXXXXXXXXXXXDNDRAVFVEAKGLEFEVHF 475 D +DE + P K D DRA+ V+AKG FEVHF Sbjct: 1405 DPKDEDSKVPSKSKSSKNKKA-----KTEAKRKKRFRAIKKDFDRAILVKAKGTYFEVHF 1459 Query: 476 RFTNEPHILLAQIAQKTAKKVYIKRSGNIEQCSVI---------------KHDN------ 592 RFTNEPHILLAQIAQK A KVYI+ SG I+ C VI K +N Sbjct: 1460 RFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRDPKKRENIPGEEK 1519 Query: 593 RDTPALQTAGVNFPAFWNMQDDLDIRNIVSNDIHAVLRTFGVEAARATIIKEVMNVFEPY 772 + PALQTAGV+F AFW MQD+LD+R + SN++HA+L TFGVEAARATIIKEV NVF Y Sbjct: 1520 KKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAY 1579 Query: 773 GISVDIRHLSLIADFMTHSGGYRPMSRY-GMAVSTSPFSKMSFETASTFIVEAAYHGEVD 949 G+ V+IRHLSLIADFMTHSGGYRPM+R+ G+A S SPFSKM+FETAS FIVEAA HG D Sbjct: 1580 GVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTD 1639 Query: 950 DLESPSARICLGLPVKMGTGCFDLMQKLQ 1036 +LES SARICLGLPVKMGTGCFDLMQK++ Sbjct: 1640 NLESASARICLGLPVKMGTGCFDLMQKIE 1668 >ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis vinifera] Length = 1740 Score = 327 bits (839), Expect = 5e-87 Identities = 185/329 (56%), Positives = 218/329 (66%), Gaps = 22/329 (6%) Frame = +2 Query: 116 LGVDAQKRRRQATDEMDYEDAXXXXXXXXXXXXQSVGFESEIDQVDVEDDNSVDGEIQIF 295 LG+DAQKR++QA+DEMDY D+ S G EID V+ E + S + E+ I Sbjct: 1420 LGLDAQKRKQQASDEMDYGDSEGEPDEGEP----SAGLTEEIDLVEDEVEISNNEEVGIS 1475 Query: 296 DGEDESRRGPVXXXXXXXXXXXXXXDKEXXXXXXXXXXXXXDNDRAVFVEAKGLEFEVHF 475 D +DE + P K D DRA+ V+AKG FEVHF Sbjct: 1476 DPKDEDSKVPSKSKSSKNKKA-----KTEAKRKKRFRAIKKDFDRAILVKAKGTYFEVHF 1530 Query: 476 RFTNEPHILLAQIAQKTAKKVYIKRSGNIEQCSVI---------------KHDN------ 592 RFTNEPHILLAQIAQK A KVYI+ SG I+ C VI K +N Sbjct: 1531 RFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRDPKKRENIPGEEK 1590 Query: 593 RDTPALQTAGVNFPAFWNMQDDLDIRNIVSNDIHAVLRTFGVEAARATIIKEVMNVFEPY 772 + PALQTAGV+F AFW MQD+LD+R + SN++HA+L TFGVEAARATIIKEV NVF Y Sbjct: 1591 KKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAY 1650 Query: 773 GISVDIRHLSLIADFMTHSGGYRPMSRY-GMAVSTSPFSKMSFETASTFIVEAAYHGEVD 949 G+ V+IRHLSLIADFMTHSGGYRPM+R+ G+A S SPFSKM+FETAS FIVEAA HG D Sbjct: 1651 GVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTD 1710 Query: 950 DLESPSARICLGLPVKMGTGCFDLMQKLQ 1036 +LES SARICLGLPVKMGTGCFDLMQK++ Sbjct: 1711 NLESASARICLGLPVKMGTGCFDLMQKIE 1739 >ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus communis] Length = 1686 Score = 317 bits (811), Expect = 8e-84 Identities = 183/336 (54%), Positives = 216/336 (64%), Gaps = 29/336 (8%) Frame = +2 Query: 116 LGVDAQKRRRQATDEMDYEDAXXXXXXXXXXXX--QSVGFESEIDQVDVEDDNSVDGEIQ 289 LG+DAQKR+ QATDEMDY+D + GFESEIDQ D E + S D + Sbjct: 1350 LGLDAQKRKLQATDEMDYDDGFEEELNEGESTASEEESGFESEIDQGDNETEISNDVMLD 1409 Query: 290 IFDGEDESRRGPVXXXXXXXXXXXXXX-----DKEXXXXXXXXXXXXXDNDRAVFVEAKG 454 E R P DK+ D DRA+FVEA+ Sbjct: 1410 NEASETLPLRKPSKPKSKKKAAESPSHGEKSKDKKKKPKAKRKSRISKDFDRAIFVEARK 1469 Query: 455 LEFEVHFRFTNEPHILLAQIAQKTAKKVYIKRSGNIEQCSV------------------- 577 + FEVHF+FTNEPHILLA+IAQKTAKKVYI+ G IEQC V Sbjct: 1470 MHFEVHFKFTNEPHILLAEIAQKTAKKVYIQNPGKIEQCRVTDCKESQVIYYGKDPKERV 1529 Query: 578 -IKHDNRD-TPALQTAGVNFPAFWNMQDDLDIRNIVSNDIHAVLRTFGVEAARATIIKEV 751 +K D ++ PAL GV+F FW MQD LD+R I SN+IHA+L+T+GVEAAR TII+E+ Sbjct: 1530 DLKPDVKEKVPALHATGVDFNTFWKMQDHLDVRYIYSNNIHAMLKTYGVEAARETIIREI 1589 Query: 752 MNVFEPYGISVDIRHLSLIADFMTHSGGYRPMSRY-GMAVSTSPFSKMSFETASTFIVEA 928 +VF+ YGI+V RHLSLIADFMTH+GGYRPMSR G+A S SPFSKMSFETAS FIVEA Sbjct: 1590 NHVFKSYGIAVSNRHLSLIADFMTHTGGYRPMSRMGGIAESISPFSKMSFETASKFIVEA 1649 Query: 929 AYHGEVDDLESPSARICLGLPVKMGTGCFDLMQKLQ 1036 A HGE+D+LE+PSARICLGLPVKMGTG FDLMQKL+ Sbjct: 1650 ALHGEIDNLETPSARICLGLPVKMGTGSFDLMQKLE 1685 >ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prunus persica] gi|462398594|gb|EMJ04262.1| hypothetical protein PRUPE_ppa000153mg [Prunus persica] Length = 1612 Score = 313 bits (802), Expect = 9e-83 Identities = 174/334 (52%), Positives = 213/334 (63%), Gaps = 28/334 (8%) Frame = +2 Query: 119 GVDAQKRRRQATDEMDYEDAXXXXXXXXXXXXQSVGFESEIDQVDVEDDNSVDGEIQIFD 298 G+DA KR+ QATDEMDYED S G ESEID+ + E + DGEI + D Sbjct: 1276 GLDAHKRKLQATDEMDYEDGCDDEVREADL---SDGDESEIDEEENEVEIGKDGEIGVID 1332 Query: 299 GEDESRRGPVXXXXXXXXXXXXXXDKEXXXXXXXXXXXXXD-----NDRAVFVEAKGLEF 463 DE P+ + + DRA+FV AKG F Sbjct: 1333 ANDEMPGSPLEEAGDLAKPKSKEKKTKSGSQIRKKRKVRAEMVKKETDRAIFVSAKGFHF 1392 Query: 464 EVHFRFT-NEPHILLAQIAQKTAKKVYIKRSGNIEQCSVIKHDN---------------- 592 EVHFRF NEPHILL+QIAQKTA+KVYI+RSG + C I D Sbjct: 1393 EVHFRFADNEPHILLSQIAQKTAQKVYIQRSGKVADCKQITCDENQVLCFGKDPENKQSF 1452 Query: 593 -----RDTPALQTAGVNFPAFWNMQDDLDIRNIVSNDIHAVLRTFGVEAARATIIKEVMN 757 ++ PALQT G++F FW +QD LD+R I SN+IHA+L T+GVEAAR TII+E+ N Sbjct: 1453 SSKEKKEMPALQTTGIDFGTFWQLQDVLDVRYIYSNNIHAMLNTYGVEAARETIIREINN 1512 Query: 758 VFEPYGISVDIRHLSLIADFMTHSGGYRPMSRYGMAV-STSPFSKMSFETASTFIVEAAY 934 VF+ YGISV+IRHL+LIADFMTH+GGYRP++R+G V S SPF+KM+FETAS FIVEAAY Sbjct: 1513 VFKSYGISVNIRHLTLIADFMTHAGGYRPLNRFGGIVESISPFNKMTFETASKFIVEAAY 1572 Query: 935 HGEVDDLESPSARICLGLPVKMGTGCFDLMQKLQ 1036 HG+VD LE+PSARICLGLPV +GTGCFDLM K++ Sbjct: 1573 HGQVDRLETPSARICLGLPVNVGTGCFDLMHKME 1606 >gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus notabilis] Length = 1770 Score = 309 bits (792), Expect = 1e-81 Identities = 172/331 (51%), Positives = 211/331 (63%), Gaps = 24/331 (7%) Frame = +2 Query: 116 LGVDAQKRRRQATDEMDYEDAXXXXXXXXXXXXQSVGFESEIDQVDVEDDNSVDGEIQIF 295 LG+DA K++RQATDEMDY+D G ESE D + E + D E+++ Sbjct: 1442 LGLDAVKQKRQATDEMDYDD---DYDERVNEEATRAGSESEDDNDEDEVEFRKDNEVEML 1498 Query: 296 DGEDESRRGPVXXXXXXXXXXXXXXDKEXXXXXXXXXXXXX--DNDRAVFVEAKGLEFEV 469 D + P K D+DR++FVEAKG F+V Sbjct: 1499 DAKGGHLESPSKAEGFSTSESLKTKTKSRAKGKKKIRRQFNRKDDDRSIFVEAKGFYFKV 1558 Query: 470 HFRFTNEPHILLAQIAQKTAKKVYIKRSGNIEQCSVIK---------------------H 586 HFRF+NE HILLAQIAQ TA +VYI+ SG ++ C I Sbjct: 1559 HFRFSNEAHILLAQIAQNTATRVYIQSSGKVDNCQQITCKENQVIYYGKDPKSRDDIPLE 1618 Query: 587 DNRDTPALQTAGVNFPAFWNMQDDLDIRNIVSNDIHAVLRTFGVEAARATIIKEVMNVFE 766 + + PALQT+GV+F FW +QD LD+R I SNDIHA+L T+GVEAAR TII+E+ NVF+ Sbjct: 1619 EKENIPALQTSGVDFMTFWKLQDILDVRYIYSNDIHAMLNTYGVEAARETIIREITNVFK 1678 Query: 767 PYGISVDIRHLSLIADFMTHSGGYRPMSRY-GMAVSTSPFSKMSFETASTFIVEAAYHGE 943 YGISV+IRHL+LIADFMTH+GGYR MSR+ G+A S SPFSKM FETAS FIVEAAYH E Sbjct: 1679 SYGISVNIRHLTLIADFMTHTGGYRSMSRHGGIADSISPFSKMCFETASKFIVEAAYHRE 1738 Query: 944 VDDLESPSARICLGLPVKMGTGCFDLMQKLQ 1036 +DDLE+PSARICLGLPVK+GTGCFDLMQKL+ Sbjct: 1739 MDDLETPSARICLGLPVKVGTGCFDLMQKLE 1769 >ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis sativus] Length = 1652 Score = 305 bits (780), Expect = 3e-80 Identities = 179/364 (49%), Positives = 221/364 (60%), Gaps = 22/364 (6%) Frame = +2 Query: 11 SKDTDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVDAQKRRRQATDEMDYEDAXXXX 190 SK + EGD S S+Q LG D +K++ QA DEMDYED Sbjct: 1296 SKGSSEGDEVSSSRQ---EEMDDDDEGNDLDVAEDLGSDXEKQKLQANDEMDYED---DS 1349 Query: 191 XXXXXXXXQSVGFESEIDQVDVEDDNSVDGEIQIFDGEDESRRGPVXXXXXXXXXXXXXX 370 S GFESE+DQ D + + D + D E++ V Sbjct: 1350 EDDLNAKESSTGFESEVDQGDEAEITNNDMIEIVKDSASENQPEIVDVSKSMSKEKTTET 1409 Query: 371 DKEXXXXXXXXXXXXXDNDRAVFVEAKGLEFEVHFRFTNEPHILLAQIAQKTAKKVYIKR 550 KE + DR++FVEAK FEVHF+FTNEPH LL+QI Q+ A+KV I+R Sbjct: 1410 SKEKKKVKSELVRK--ETDRSIFVEAKENHFEVHFKFTNEPHTLLSQIVQRAAQKVSIQR 1467 Query: 551 SGNIEQCS--------VIKHDNR-------------DTPALQTAGVNFPAFWNMQDDLDI 667 SG I QC VI H N PALQT+GV+F W MQD+LD+ Sbjct: 1468 SGKIIQCQQITCKEGQVIYHGNNLKERKNLKPEEKEKIPALQTSGVDFKTLWEMQDELDV 1527 Query: 668 RNIVSNDIHAVLRTFGVEAARATIIKEVMNVFEPYGISVDIRHLSLIADFMTHSGGYRPM 847 R I SNDIHA+L+T+GVEAARATII+E+ N+F YGISV+IRHLSL+AD+MTHSGGYRPM Sbjct: 1528 RYIYSNDIHAMLQTYGVEAARATIIREIQNIFTSYGISVNIRHLSLVADYMTHSGGYRPM 1587 Query: 848 SRY-GMAVSTSPFSKMSFETASTFIVEAAYHGEVDDLESPSARICLGLPVKMGTGCFDLM 1024 SR G++ S SPFS+M+FETA FIV+AA HGEVD+LE+PS+RICLGLPVKMGTG FDLM Sbjct: 1588 SRLGGISDSISPFSRMTFETAGKFIVQAALHGEVDNLETPSSRICLGLPVKMGTGSFDLM 1647 Query: 1025 QKLQ 1036 QK++ Sbjct: 1648 QKIE 1651 >ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis sativus] Length = 1650 Score = 304 bits (779), Expect = 4e-80 Identities = 179/364 (49%), Positives = 221/364 (60%), Gaps = 22/364 (6%) Frame = +2 Query: 11 SKDTDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVDAQKRRRQATDEMDYEDAXXXX 190 SK + EGD S S+Q LG D +K++ QA DEMDYED Sbjct: 1293 SKGSSEGDEVSSSRQ--KENDDDDDEGNDLDVAEDLGSDMKKQKLQANDEMDYED---DS 1347 Query: 191 XXXXXXXXQSVGFESEIDQVDVEDDNSVDGEIQIFDGEDESRRGPVXXXXXXXXXXXXXX 370 S GFESE+DQ D + + D + D E++ V Sbjct: 1348 EDDLNAKESSTGFESEVDQGDEAEITNNDMIEIVKDSASENQPEIVDVSKSMSKEKTTET 1407 Query: 371 DKEXXXXXXXXXXXXXDNDRAVFVEAKGLEFEVHFRFTNEPHILLAQIAQKTAKKVYIKR 550 KE + DR++FVEAK FEVHF+FTNEPH LL+QI Q+ A+KV I+R Sbjct: 1408 SKEKKKVKSELVRK--ETDRSIFVEAKENHFEVHFKFTNEPHTLLSQIVQRAAQKVSIQR 1465 Query: 551 SGNIEQCS--------VIKHDNR-------------DTPALQTAGVNFPAFWNMQDDLDI 667 SG I QC VI H N PALQT+GV+F W MQD+LD+ Sbjct: 1466 SGKIIQCQQITCKEGQVIYHGNNLKERKNLKPEEKEKIPALQTSGVDFKTLWEMQDELDV 1525 Query: 668 RNIVSNDIHAVLRTFGVEAARATIIKEVMNVFEPYGISVDIRHLSLIADFMTHSGGYRPM 847 R I SNDIHA+L+T+GVEAARATII+E+ N+F YGISV+IRHLSL+AD+MTHSGGYRPM Sbjct: 1526 RYIYSNDIHAMLQTYGVEAARATIIREIQNIFTSYGISVNIRHLSLVADYMTHSGGYRPM 1585 Query: 848 SRY-GMAVSTSPFSKMSFETASTFIVEAAYHGEVDDLESPSARICLGLPVKMGTGCFDLM 1024 SR G++ S SPFS+M+FETA FIV+AA HGEVD+LE+PS+RICLGLPVKMGTG FDLM Sbjct: 1586 SRLGGISDSISPFSRMTFETAGKFIVQAALHGEVDNLETPSSRICLGLPVKMGTGSFDLM 1645 Query: 1025 QKLQ 1036 QK++ Sbjct: 1646 QKIE 1649 >ref|XP_004299740.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Fragaria vesca subsp. vesca] Length = 1673 Score = 303 bits (776), Expect = 9e-80 Identities = 168/334 (50%), Positives = 207/334 (61%), Gaps = 28/334 (8%) Frame = +2 Query: 119 GVDAQKRRRQATDEMDYEDAXXXXXXXXXXXXQSVGFESEIDQVDVEDDNSVDGEIQIFD 298 G+DAQK++RQ TDEM+Y+D QS FE+EID +++ + DG I D Sbjct: 1342 GLDAQKQKRQGTDEMEYDD---DWEDEFNEGRQSDEFENEIDNGELDVEIDKDGVTGISD 1398 Query: 299 GEDESRRG-PVXXXXXXXXXXXXXXDKEXXXXXXXXXXXXXDNDRAVFVEAKGLEFEVHF 475 D+ + ++ + DRA FV AKG FE+HF Sbjct: 1399 ANDKMQESCSTGGISKPHSKGKKTKSRDKIKKKTSAKLVRKEYDRATFVSAKGFHFEIHF 1458 Query: 476 RFTNEPHILLAQIAQKTAKKVYIKRSGNIEQCSVI------------------------- 580 +FTNEPHILL QIAQKTA+ VY+K SGNI C I Sbjct: 1459 KFTNEPHILLDQIAQKTARNVYVKSSGNILDCQDIDIYGNEDQVFCCWNDPRNKLSGEKN 1518 Query: 581 -KHDNRDTPALQTAGVNFPAFWNMQDDLDIRNIVSNDIHAVLRTFGVEAARATIIKEVMN 757 + + ALQTAGV+F W +QDDLD+ I SN+IHA+L T+GVEAAR TIIKE+ N Sbjct: 1519 PSEEEKKMRALQTAGVDFATLWKLQDDLDVNYIYSNNIHAMLNTYGVEAARETIIKEISN 1578 Query: 758 VFEPYGISVDIRHLSLIADFMTHSGGYRPMSRY-GMAVSTSPFSKMSFETASTFIVEAAY 934 VF+ YGISV+IRHL LIAD+MT SG YRPM+R+ G+A STSP +KMSFETAS FI EAAY Sbjct: 1579 VFKVYGISVNIRHLLLIADYMTRSGSYRPMNRFGGIAESTSPMNKMSFETASKFIQEAAY 1638 Query: 935 HGEVDDLESPSARICLGLPVKMGTGCFDLMQKLQ 1036 HGE DDLE+PSARICLGLPVK+GTGCFDLM K++ Sbjct: 1639 HGEKDDLETPSARICLGLPVKVGTGCFDLMHKME 1672 >ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum tuberosum] Length = 1675 Score = 293 bits (749), Expect = 1e-76 Identities = 167/333 (50%), Positives = 206/333 (61%), Gaps = 27/333 (8%) Frame = +2 Query: 116 LGVDAQKRRRQATDEMDYEDAXXXXXXXXXXXXQSVGFES--EIDQVDVEDDNSVDGEIQ 289 L DAQKR++Q TDEMDY+D + E EID D E+ + E Q Sbjct: 1349 LSSDAQKRKQQTTDEMDYDDDENEDEAETTAEIEDEKSEQTDEIDNGDEEEIGNRGNEEQ 1408 Query: 290 IFD----GEDESRRGPVXXXXXXXXXXXXXXDKEXXXXXXXXXXXXXDNDRAVFVEAKGL 457 + +D S KE D+DR VFV+ +GL Sbjct: 1409 MSKLQSTEDDISNTKSSKSKTKTKTTVKQNKKKERRSKK--------DSDRCVFVDVEGL 1460 Query: 458 EFEVHFRFTNEPHILLAQIAQKTAKKVYIKRSGNIEQCSVIKHDNRDTP----------- 604 FEVHFRF NEPHILLAQ+AQKTAKKVYIK SG I+QC ++K++ + Sbjct: 1461 HFEVHFRFVNEPHILLAQVAQKTAKKVYIKNSGKIDQCRMVKYEVTENTVMWDEYQTKQQ 1520 Query: 605 ---------ALQTAGVNFPAFWNMQDDLDIRNIVSNDIHAVLRTFGVEAARATIIKEVMN 757 AL+ AGV+F FW MQDDLD+ I +N+I A+L T+GVEAARA+I++EV Sbjct: 1521 SQDSDSAYWALKAAGVDFGTFWEMQDDLDVTRIYTNNIRAMLNTYGVEAARASILREVKT 1580 Query: 758 VFEPYGISVDIRHLSLIADFMTHSGGYRPMSRYG-MAVSTSPFSKMSFETASTFIVEAAY 934 VF YG+ +D RHLSLIADFMTH+GGY+PMSR+G ++ S SPF KMSFETAS FIVEAA Sbjct: 1581 VFGIYGVEIDFRHLSLIADFMTHTGGYQPMSRHGSISESLSPFLKMSFETASKFIVEAAA 1640 Query: 935 HGEVDDLESPSARICLGLPVKMGTGCFDLMQKL 1033 HG D+LE+PS+RICLGLPVKMGTGCFD+MQKL Sbjct: 1641 HGLTDNLETPSSRICLGLPVKMGTGCFDIMQKL 1673 >ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma cacao] gi|508717461|gb|EOY09358.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma cacao] Length = 1397 Score = 292 bits (748), Expect = 2e-76 Identities = 172/364 (47%), Positives = 213/364 (58%), Gaps = 21/364 (5%) Frame = +2 Query: 8 SSKDTDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVDAQKRRRQATDEMDYEDAXXX 187 +S + DE + +S++ LG+DAQK+++Q TDEMDYED Sbjct: 1036 ASNEMDEDVSEGRSRETKNDDDDDDDDADDEERAEDLGLDAQKQKQQTTDEMDYED---D 1092 Query: 188 XXXXXXXXXQSVGFESEIDQVDVEDDNSVDGEIQIFDGEDE-SRRGPVXXXXXXXXXXXX 364 ESEID + E I +G+DE S+ P Sbjct: 1093 SEVEQNEGASLAALESEIDMSEDETGTIQINMIGSDNGKDEISQSSPNLENRSNPKSREE 1152 Query: 365 XXDKEXXXXXXXXXXXXXDNDRAVFVEAKGLEFEVHFRFTNEPHILLAQIAQKTAKKVYI 544 E ++DRA+F +GL FEVHF+ NEPHILLAQIA+KTAKKVYI Sbjct: 1153 KTGSEPKRKKMKAKFVRKESDRAIFNAIRGLCFEVHFKLKNEPHILLAQIAEKTAKKVYI 1212 Query: 545 KRSGNIEQCSVIK-------------------HDNRDTPALQTAGVNFPAFWNMQDDLDI 667 + G I+QC V D AL T GV+F AFW M+D +D+ Sbjct: 1213 QSFGKIDQCRVTDCSENQVFYYGEDPKKRKSPSDKEKIQALHTTGVDFGAFWKMEDHIDV 1272 Query: 668 RNIVSNDIHAVLRTFGVEAARATIIKEVMNVFEPYGISVDIRHLSLIADFMTHSGGYRPM 847 R + SN IHA+L T+GVEAAR TII+E+ +VF YGI+V+IRHL+LIADFMTHSG YRPM Sbjct: 1273 RYLYSNSIHAMLNTYGVEAARETIIREISHVFTSYGIAVNIRHLTLIADFMTHSGRYRPM 1332 Query: 848 SRY-GMAVSTSPFSKMSFETASTFIVEAAYHGEVDDLESPSARICLGLPVKMGTGCFDLM 1024 SR G+A S SPFSKMSFETAS FIVEAA HG VD+LE+PS+RICLGLPVKMGTG FDLM Sbjct: 1333 SRLGGIAESISPFSKMSFETASKFIVEAAKHGLVDNLETPSSRICLGLPVKMGTGSFDLM 1392 Query: 1025 QKLQ 1036 QK++ Sbjct: 1393 QKVE 1396 >ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobroma cacao] gi|508717460|gb|EOY09357.1| Nuclear RNA polymerase A1 isoform 3 [Theobroma cacao] Length = 1400 Score = 292 bits (748), Expect = 2e-76 Identities = 172/364 (47%), Positives = 213/364 (58%), Gaps = 21/364 (5%) Frame = +2 Query: 8 SSKDTDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVDAQKRRRQATDEMDYEDAXXX 187 +S + DE + +S++ LG+DAQK+++Q TDEMDYED Sbjct: 1039 ASNEMDEDVSEGRSRETKNDDDDDDDDADDEERAEDLGLDAQKQKQQTTDEMDYED---D 1095 Query: 188 XXXXXXXXXQSVGFESEIDQVDVEDDNSVDGEIQIFDGEDE-SRRGPVXXXXXXXXXXXX 364 ESEID + E I +G+DE S+ P Sbjct: 1096 SEVEQNEGASLAALESEIDMSEDETGTIQINMIGSDNGKDEISQSSPNLENRSNPKSREE 1155 Query: 365 XXDKEXXXXXXXXXXXXXDNDRAVFVEAKGLEFEVHFRFTNEPHILLAQIAQKTAKKVYI 544 E ++DRA+F +GL FEVHF+ NEPHILLAQIA+KTAKKVYI Sbjct: 1156 KTGSEPKRKKMKAKFVRKESDRAIFNAIRGLCFEVHFKLKNEPHILLAQIAEKTAKKVYI 1215 Query: 545 KRSGNIEQCSVIK-------------------HDNRDTPALQTAGVNFPAFWNMQDDLDI 667 + G I+QC V D AL T GV+F AFW M+D +D+ Sbjct: 1216 QSFGKIDQCRVTDCSENQVFYYGEDPKKRKSPSDKEKIQALHTTGVDFGAFWKMEDHIDV 1275 Query: 668 RNIVSNDIHAVLRTFGVEAARATIIKEVMNVFEPYGISVDIRHLSLIADFMTHSGGYRPM 847 R + SN IHA+L T+GVEAAR TII+E+ +VF YGI+V+IRHL+LIADFMTHSG YRPM Sbjct: 1276 RYLYSNSIHAMLNTYGVEAARETIIREISHVFTSYGIAVNIRHLTLIADFMTHSGRYRPM 1335 Query: 848 SRY-GMAVSTSPFSKMSFETASTFIVEAAYHGEVDDLESPSARICLGLPVKMGTGCFDLM 1024 SR G+A S SPFSKMSFETAS FIVEAA HG VD+LE+PS+RICLGLPVKMGTG FDLM Sbjct: 1336 SRLGGIAESISPFSKMSFETASKFIVEAAKHGLVDNLETPSSRICLGLPVKMGTGSFDLM 1395 Query: 1025 QKLQ 1036 QK++ Sbjct: 1396 QKVE 1399 >ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao] gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao] Length = 1689 Score = 292 bits (748), Expect = 2e-76 Identities = 172/364 (47%), Positives = 213/364 (58%), Gaps = 21/364 (5%) Frame = +2 Query: 8 SSKDTDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVDAQKRRRQATDEMDYEDAXXX 187 +S + DE + +S++ LG+DAQK+++Q TDEMDYED Sbjct: 1328 ASNEMDEDVSEGRSRETKNDDDDDDDDADDEERAEDLGLDAQKQKQQTTDEMDYED---D 1384 Query: 188 XXXXXXXXXQSVGFESEIDQVDVEDDNSVDGEIQIFDGEDE-SRRGPVXXXXXXXXXXXX 364 ESEID + E I +G+DE S+ P Sbjct: 1385 SEVEQNEGASLAALESEIDMSEDETGTIQINMIGSDNGKDEISQSSPNLENRSNPKSREE 1444 Query: 365 XXDKEXXXXXXXXXXXXXDNDRAVFVEAKGLEFEVHFRFTNEPHILLAQIAQKTAKKVYI 544 E ++DRA+F +GL FEVHF+ NEPHILLAQIA+KTAKKVYI Sbjct: 1445 KTGSEPKRKKMKAKFVRKESDRAIFNAIRGLCFEVHFKLKNEPHILLAQIAEKTAKKVYI 1504 Query: 545 KRSGNIEQCSVIK-------------------HDNRDTPALQTAGVNFPAFWNMQDDLDI 667 + G I+QC V D AL T GV+F AFW M+D +D+ Sbjct: 1505 QSFGKIDQCRVTDCSENQVFYYGEDPKKRKSPSDKEKIQALHTTGVDFGAFWKMEDHIDV 1564 Query: 668 RNIVSNDIHAVLRTFGVEAARATIIKEVMNVFEPYGISVDIRHLSLIADFMTHSGGYRPM 847 R + SN IHA+L T+GVEAAR TII+E+ +VF YGI+V+IRHL+LIADFMTHSG YRPM Sbjct: 1565 RYLYSNSIHAMLNTYGVEAARETIIREISHVFTSYGIAVNIRHLTLIADFMTHSGRYRPM 1624 Query: 848 SRY-GMAVSTSPFSKMSFETASTFIVEAAYHGEVDDLESPSARICLGLPVKMGTGCFDLM 1024 SR G+A S SPFSKMSFETAS FIVEAA HG VD+LE+PS+RICLGLPVKMGTG FDLM Sbjct: 1625 SRLGGIAESISPFSKMSFETASKFIVEAAKHGLVDNLETPSSRICLGLPVKMGTGSFDLM 1684 Query: 1025 QKLQ 1036 QK++ Sbjct: 1685 QKVE 1688 >ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine max] Length = 1651 Score = 291 bits (746), Expect = 3e-76 Identities = 165/329 (50%), Positives = 199/329 (60%), Gaps = 22/329 (6%) Frame = +2 Query: 116 LGVDAQKRRRQATDEMDYEDAXXXXXXXXXXXXQSVGFESEIDQVDVEDDNSVDGEIQIF 295 LG DAQKR+ Q TDE+DYED + G E D E+ N+V Sbjct: 1334 LGSDAQKRKLQGTDEVDYEDGPEEETHDGELSEEIEGDEDGSDVDANENYNNVTDA---- 1389 Query: 296 DGEDESRRGPVXXXXXXXXXXXXXXDKEXXXXXXXXXXXXXDNDRAVFVEAKGLEFEVHF 475 E P K+ DRA+FVEAKG FE+HF Sbjct: 1390 -NNSEGLEKPSKSKTIDEKQNLKREKKKSEPTTKKY-------DRAIFVEAKGKHFEIHF 1441 Query: 476 RFTNEPHILLAQIAQKTAKKVYIKRSGNIEQCSVIK---------------------HDN 592 RFT EPHILL QIAQ+TAKKV I+ G + +C I + Sbjct: 1442 RFTGEPHILLTQIAQRTAKKVCIQNFGKVGECKAITCKESGVIYYGKDGRKRIEISASEK 1501 Query: 593 RDTPALQTAGVNFPAFWNMQDDLDIRNIVSNDIHAVLRTFGVEAARATIIKEVMNVFEPY 772 PALQT+GV+F FW ++DDLD+R I SN++HA+L +GVEAAR TII+EV NVF+ Y Sbjct: 1502 EQIPALQTSGVHFKTFWELEDDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQNVFKSY 1561 Query: 773 GISVDIRHLSLIADFMTHSGGYRPMSRYG-MAVSTSPFSKMSFETASTFIVEAAYHGEVD 949 GISV+IRHL+LIADFMTH+G YRPM+R G +A STSPF KM FETA FIVEAAYHG+VD Sbjct: 1562 GISVNIRHLTLIADFMTHTGSYRPMNRTGSIADSTSPFIKMCFETAGNFIVEAAYHGQVD 1621 Query: 950 DLESPSARICLGLPVKMGTGCFDLMQKLQ 1036 +LE+PSARICLGLPVKMGTGC DL+QKL+ Sbjct: 1622 NLETPSARICLGLPVKMGTGCHDLIQKLE 1650 >ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris] gi|561018822|gb|ESW17626.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris] Length = 1637 Score = 291 bits (745), Expect = 4e-76 Identities = 166/329 (50%), Positives = 212/329 (64%), Gaps = 22/329 (6%) Frame = +2 Query: 116 LGVDAQKRRRQATDEMDYEDAXXXXXXXXXXXXQSVGFESEIDQVDVEDDNSVDGEIQIF 295 LG DAQKR+RQ TDE+DYED + E E D+ +V+D+ ++D Sbjct: 1326 LGSDAQKRKRQGTDEVDYEDGPEEETHDGV-----LSEEIENDEDNVDDNMTLDASDS-- 1378 Query: 296 DGEDESRRGPVXXXXXXXXXXXXXXDKEXXXXXXXXXXXXXDNDRAVFVEAKGLEFEVHF 475 +G DE + +K+ DRAVFV+AKG+ F++HF Sbjct: 1379 EGLDE-----LSESKSIFEKDSLKREKKKSRPTTRKY------DRAVFVKAKGMHFQIHF 1427 Query: 476 RFTNEPHILLAQIAQKTAKKVYIKRSGNIEQCSVI---------------KHDN------ 592 +FT EP ILLA+IA ++AKKV I+ SG + +C + K D+ Sbjct: 1428 KFTGEPDILLAEIALRSAKKVCIQNSGRVGECKAVTCKESGVMYYGEDSRKRDDIPASVK 1487 Query: 593 RDTPALQTAGVNFPAFWNMQDDLDIRNIVSNDIHAVLRTFGVEAARATIIKEVMNVFEPY 772 PALQT+GV+F FW +QDDLD+R I SN++HA+L +GVEAAR TII+EV NVF+ Y Sbjct: 1488 EKIPALQTSGVHFKTFWELQDDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQNVFKSY 1547 Query: 773 GISVDIRHLSLIADFMTHSGGYRPMSRYG-MAVSTSPFSKMSFETASTFIVEAAYHGEVD 949 GISV+IRHL+LIADFMTHSGGYRPM+R G +A TSPF KM FETAS FIVEAAYHG+VD Sbjct: 1548 GISVNIRHLTLIADFMTHSGGYRPMNRNGSIADCTSPFIKMCFETASKFIVEAAYHGQVD 1607 Query: 950 DLESPSARICLGLPVKMGTGCFDLMQKLQ 1036 +LE+PS+RICLGLPVKMGTGC DL+QKL+ Sbjct: 1608 NLETPSSRICLGLPVKMGTGCHDLIQKLE 1636 >ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum lycopersicum] Length = 1677 Score = 291 bits (744), Expect = 5e-76 Identities = 162/331 (48%), Positives = 202/331 (61%), Gaps = 25/331 (7%) Frame = +2 Query: 116 LGVDAQKRRRQATDEMDYED----AXXXXXXXXXXXXQSVGFESEIDQVDVEDDNSVDGE 283 L DAQKR++Q TDEMDY+D A + EID D E++ E Sbjct: 1351 LSSDAQKRKQQTTDEMDYDDDEDEAEAEAEATAEIEDEKSEQTDEIDNGDEEENGDRGNE 1410 Query: 284 IQIFDGEDESRRGPVXXXXXXXXXXXXXXDKEXXXXXXXXXXXXXDNDRAVFVEAKGLEF 463 E S+ D+DR VFV+ +GL F Sbjct: 1411 ------EHTSKLQSTEEDISNTKTSKSKTKTTVKQKKKKERRSKKDSDRCVFVDVEGLHF 1464 Query: 464 EVHFRFTNEPHILLAQIAQKTAKKVYIKRSGNIEQCSVIKHDNRDTP------------- 604 EVHFRF NEPHILLAQ+AQKTAKKVY+K SG I+QC ++K++ + Sbjct: 1465 EVHFRFVNEPHILLAQVAQKTAKKVYVKNSGKIDQCRMVKYEVTENTVMWDENQTKQQRQ 1524 Query: 605 -------ALQTAGVNFPAFWNMQDDLDIRNIVSNDIHAVLRTFGVEAARATIIKEVMNVF 763 AL+ AGV+F FW MQDDLD+ I +N+I A+L T+GVEAARA+I++EV VF Sbjct: 1525 DSDSAYWALKAAGVDFGTFWEMQDDLDVTRIYTNNIRAMLNTYGVEAARASILREVKTVF 1584 Query: 764 EPYGISVDIRHLSLIADFMTHSGGYRPMSRYG-MAVSTSPFSKMSFETASTFIVEAAYHG 940 YG+ +D RHLSLIADFMTH+GGY+PMSR+G ++ S SPF KMSFETAS FIVEAA HG Sbjct: 1585 GIYGVEIDFRHLSLIADFMTHTGGYQPMSRHGSISESLSPFLKMSFETASKFIVEAAAHG 1644 Query: 941 EVDDLESPSARICLGLPVKMGTGCFDLMQKL 1033 D+LE+PS+RICLGLPVKMGTGCFD+MQ+L Sbjct: 1645 LTDNLETPSSRICLGLPVKMGTGCFDIMQEL 1675 >ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus sinensis] Length = 1715 Score = 290 bits (743), Expect = 6e-76 Identities = 175/373 (46%), Positives = 223/373 (59%), Gaps = 30/373 (8%) Frame = +2 Query: 8 SSKDTDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVDAQKRRRQATDEMDYEDAXXX 187 +S +TD+ +G+ SQ LG+DA K++++ATDE DYED Sbjct: 1351 ASNETDQDGSGNVSQ---CRGDDDDADDADGEEAEDLGMDAHKQKQRATDEKDYEDGSEE 1407 Query: 188 XXXXXXXXXQSVGFESEIDQVDVE-DDNSVDGEIQ-------IFDGEDESRRGPVXXXXX 343 + GF SEIDQ + E DD+ + EI+ I +D++ Sbjct: 1408 EMNDGV---SAAGFGSEIDQAESEIDDDQAETEIEDDRATNEIETSQDQASENLKPFTPK 1464 Query: 344 XXXXXXXXXDKEXXXXXXXXXXXXXDNDRAVFVEAKGLEFEVHFRFTNEPHILLAQIAQK 523 K D DRA++V A+G+ FE HF+F NEP+ILLAQIA+ Sbjct: 1465 SSKKKSKSKSKRKKARAKLVKK---DTDRAIYVAARGMHFEAHFKFINEPNILLAQIARH 1521 Query: 524 TAKKVYIKRSGNIEQCSV--------------------IKHDNRD-TPALQTAGVNFPAF 640 AKKVYI+ SG I+QC V IK + ++ AL T GV+F AF Sbjct: 1522 VAKKVYIQSSGKIDQCQVTNCKESQVIYYGKDPKTREDIKPEEKEKVQALHTTGVDFHAF 1581 Query: 641 WNMQDDLDIRNIVSNDIHAVLRTFGVEAARATIIKEVMNVFEPYGISVDIRHLSLIADFM 820 W +QD +D+R I SN+I A+L T+GVEAAR TII+E+ +VF YGISV+ RHLSLIADFM Sbjct: 1582 WRLQDFIDVRYIYSNNIQAMLETYGVEAARETIIREIKHVFGSYGISVNTRHLSLIADFM 1641 Query: 821 THSGGYRPMSRY-GMAVSTSPFSKMSFETASTFIVEAAYHGEVDDLESPSARICLGLPVK 997 THSGGYRPMSR G+A S SPFSKM+FETAS FIVEAA +G+VD L++PSARICLGLPVK Sbjct: 1642 THSGGYRPMSRLGGIAESVSPFSKMTFETASKFIVEAASYGQVDKLDTPSARICLGLPVK 1701 Query: 998 MGTGCFDLMQKLQ 1036 MGTG FDLMQKL+ Sbjct: 1702 MGTGSFDLMQKLE 1714 >ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citrus clementina] gi|557523327|gb|ESR34694.1| hypothetical protein CICLE_v10004132mg [Citrus clementina] Length = 1715 Score = 288 bits (737), Expect = 3e-75 Identities = 168/337 (49%), Positives = 212/337 (62%), Gaps = 30/337 (8%) Frame = +2 Query: 116 LGVDAQKRRRQATDEMDYEDAXXXXXXXXXXXXQSVGFESEIDQVDVE-DDNSVDGEIQ- 289 LG+DA K++++ATDE DYED + GF SEIDQ + E DD+ + EI+ Sbjct: 1384 LGMDAHKQKQRATDEKDYEDGSEGEMNDGV---SAAGFGSEIDQAESEIDDDQAETEIED 1440 Query: 290 ------IFDGEDESRRGPVXXXXXXXXXXXXXXDKEXXXXXXXXXXXXXDNDRAVFVEAK 451 I + +D++ K D DRA++V A+ Sbjct: 1441 DRATNEIENSQDQASENLKPFTPKSSKKKSKSKTKRKKARAKLVKK---DTDRAIYVAAR 1497 Query: 452 GLEFEVHFRFTNEPHILLAQIAQKTAKKVYIKRSGNIEQCSV------------------ 577 G+ FE HF+F NEP+ILLAQIA+ AKKVYI+ SG I+QC V Sbjct: 1498 GMHFEAHFKFINEPNILLAQIARHVAKKVYIQSSGKIDQCQVTNCKESQVIYYGKDPKKR 1557 Query: 578 --IKHDNRD-TPALQTAGVNFPAFWNMQDDLDIRNIVSNDIHAVLRTFGVEAARATIIKE 748 IK + ++ AL T GV+F AFW +QD +D+R I SN+I A+L T+GVEAAR TII+E Sbjct: 1558 EDIKPEEKEKVQALHTTGVDFHAFWQLQDFIDVRYIYSNNIQAMLETYGVEAARETIIRE 1617 Query: 749 VMNVFEPYGISVDIRHLSLIADFMTHSGGYRPMSRY-GMAVSTSPFSKMSFETASTFIVE 925 + +VF YGISV+ RHLSLIADFMTHSGGYRPMSR G+A S SPFSKM+FE AS FIVE Sbjct: 1618 IKHVFGSYGISVNTRHLSLIADFMTHSGGYRPMSRLGGIAESVSPFSKMTFEIASKFIVE 1677 Query: 926 AAYHGEVDDLESPSARICLGLPVKMGTGCFDLMQKLQ 1036 AA +G+VD L++PSARICLGLPVKMGTG FDLMQKL+ Sbjct: 1678 AASYGQVDKLDTPSARICLGLPVKMGTGSFDLMQKLE 1714 >ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula] gi|355509045|gb|AES90187.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula] Length = 1628 Score = 285 bits (730), Expect = 2e-74 Identities = 158/329 (48%), Positives = 204/329 (62%), Gaps = 23/329 (6%) Frame = +2 Query: 119 GVDAQKRRRQATDEMDYEDAXXXXXXXXXXXXQSVGFESEIDQVDVEDDNSVD--GEIQI 292 G DAQK +++ATDE+DY+D +S E D D EDDN V+ G+ Sbjct: 1316 GFDAQKSKQRATDEVDYDDGPEEETHDGE---KSEDVEVSEDGKDDEDDNGVEVNGDDSD 1372 Query: 293 FDGEDESRRGPVXXXXXXXXXXXXXXDKEXXXXXXXXXXXXXDNDRAVFVEAKGLEFEVH 472 + D + + K+ DR V+V+A G+ FE+H Sbjct: 1373 IEVNDSDKNVTLEETSKSKKRKFEPASKKY--------------DRRVYVKAGGMRFEIH 1418 Query: 473 FRFTNEPHILLAQIAQKTAKKVYIKRSGNIEQCSVI---------------KHDN----- 592 F+F EPHILLAQIAQ+TA+KV I+ G + QC I K D+ Sbjct: 1419 FKFIGEPHILLAQIAQRTAEKVCIQNFGKVGQCKAITCKESGVIYYGEDDSKRDDIPSSV 1478 Query: 593 -RDTPALQTAGVNFPAFWNMQDDLDIRNIVSNDIHAVLRTFGVEAARATIIKEVMNVFEP 769 PALQT+G++F FW M+DDL +R + SND+HA+L+ +GVEAA+ II+EV NVF+ Sbjct: 1479 KEKIPALQTSGIHFKTFWEMEDDLKVRYVYSNDVHAILKAYGVEAAKEVIIREVQNVFKS 1538 Query: 770 YGISVDIRHLSLIADFMTHSGGYRPMSRYGMAVSTSPFSKMSFETASTFIVEAAYHGEVD 949 YGISV+IRHL LIADFMTHSG YRP++R G+A STSPF K+S+ETAS FIVEAA HG+VD Sbjct: 1539 YGISVNIRHLMLIADFMTHSGSYRPLTRSGIADSTSPFVKISYETASNFIVEAARHGQVD 1598 Query: 950 DLESPSARICLGLPVKMGTGCFDLMQKLQ 1036 LE+PS+RICLGLPVKMGTGC DL+QKL+ Sbjct: 1599 TLETPSSRICLGLPVKMGTGCIDLIQKLE 1627 >ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Populus trichocarpa] gi|550335519|gb|ERP58815.1| hypothetical protein POPTR_0006s05420g [Populus trichocarpa] Length = 1132 Score = 283 bits (724), Expect = 1e-73 Identities = 164/349 (46%), Positives = 208/349 (59%), Gaps = 42/349 (12%) Frame = +2 Query: 116 LGVDAQKRRRQATDEMDYEDAXXXXXXXXXXXXQSV----GFESEIDQVDVEDDNS---- 271 LG+D QKR++Q TDEMDY+D G ES+ + D E + S Sbjct: 783 LGLDVQKRKQQVTDEMDYDDGSEGVLNEDEGDLSGSQAPSGSESDTEPADKESEISNTDM 842 Query: 272 VDGEIQIFD--------GEDESRR----GPVXXXXXXXXXXXXXXDKEXXXXXXXXXXXX 415 VD + + F+ + +SR+ ++ Sbjct: 843 VDYDSEYFEKPTHLGNYSKPKSRKKTSESSSQVEMHSKLKSTEKKKQKAKGKKVRSKLVK 902 Query: 416 XDNDRAVFVEAKGLEFEVHFRFTNEPHILLAQIAQKTAKKVYIKRSGNIEQCSVIK---- 583 D DR++FVEAKGL FE+H +FTNEPHILLA+IAQKTAKKV I+ G +++C V Sbjct: 903 KDFDRSIFVEAKGLHFEIHLKFTNEPHILLAEIAQKTAKKVCIQNPGKVQRCQVTDCKEN 962 Query: 584 -----------------HDNRDTPALQTAGVNFPAFWNMQDDLDIRNIVSNDIHAVLRTF 712 + + PAL T GV+F FW MQD LD+R + SN IH +L+ + Sbjct: 963 QVIYYGKDPKRRIDIEPGEKQKIPALHTIGVDFNTFWKMQDHLDVRYMYSNSIHGMLKAY 1022 Query: 713 GVEAARATIIKEVMNVFEPYGISVDIRHLSLIADFMTHSGGYRPMSRY-GMAVSTSPFSK 889 GVEAAR TII+E+ +VF YGISV+ RHLSLIAD+MTH+G YRPMSR G++ S SP SK Sbjct: 1023 GVEAARETIIREIKHVFNSYGISVNTRHLSLIADYMTHTGEYRPMSRIGGISESISPLSK 1082 Query: 890 MSFETASTFIVEAAYHGEVDDLESPSARICLGLPVKMGTGCFDLMQKLQ 1036 MSFETAS FIVEAA HGEVD+LE+PSAR+CLGLPVKMGTG FDLMQKL+ Sbjct: 1083 MSFETASKFIVEAALHGEVDNLEAPSARVCLGLPVKMGTGSFDLMQKLE 1131 >ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer arietinum] Length = 1650 Score = 280 bits (715), Expect = 1e-72 Identities = 160/330 (48%), Positives = 206/330 (62%), Gaps = 23/330 (6%) Frame = +2 Query: 116 LGVDAQKRRRQATDEMDYEDAXXXXXXXXXXXXQSV-GFESEIDQVDVEDDNSVDGEIQI 292 LG+DAQK +RQ D++DY+D + + G E D V+DD DG+ Sbjct: 1323 LGLDAQKSKRQVVDDVDYDDGPEEETLEDGELSEDLEGVEDAKDNEYVKDDG--DGKDDE 1380 Query: 293 FDGEDESRRGPVXXXXXXXXXXXXXXDKEXXXXXXXXXXXXXDNDRAVFVEAKGLEFEVH 472 DG+ + + + DR V+V+ + FE+H Sbjct: 1381 -DGKGDEDGSDIEVNENDKKVTLGANYSQGPEENSKSQPVSKKFDRRVYVKFEKRHFEIH 1439 Query: 473 FRFTNEPHILLAQIAQKTAKKVYIKRSGNIEQCS--------VIKHDNRDT--------- 601 F+FT EPHILLAQIAQKTA+KV I+ G + QC VI + D+ Sbjct: 1440 FKFTGEPHILLAQIAQKTAEKVCIQNFGKVGQCKAITCKESGVIYYGEDDSKREEIPSSV 1499 Query: 602 ----PALQTAGVNFPAFWNMQDDLDIRNIVSNDIHAVLRTFGVEAARATIIKEVMNVFEP 769 PALQT+G++F +FW MQDDL++R + SN++HA+L T+GVEAA+ TII+EV NVF+ Sbjct: 1500 KEKIPALQTSGIHFKSFWEMQDDLNVRYVYSNNVHAILSTYGVEAAKETIIREVQNVFKS 1559 Query: 770 YGISVDIRHLSLIADFMTHSGGYRPMSRYG-MAVSTSPFSKMSFETASTFIVEAAYHGEV 946 YGISV+IRHL LIADFMTHSG YRPMSR G +A STSPF K+ FETAS FIVEAA HG+V Sbjct: 1560 YGISVNIRHLMLIADFMTHSGCYRPMSRKGSIADSTSPFLKICFETASNFIVEAACHGQV 1619 Query: 947 DDLESPSARICLGLPVKMGTGCFDLMQKLQ 1036 D+L+SPSARICLGLPVKMGTGC +L+QKL+ Sbjct: 1620 DNLDSPSARICLGLPVKMGTGCHELIQKLE 1649