BLASTX nr result

ID: Akebia22_contig00006023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00006023
         (230 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot...   110   2e-22
ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ...   107   2e-21
gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pach...   105   9e-21
ref|XP_002285646.1| PREDICTED: chlorophyll a-b binding protein 4...   104   1e-20
emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [S...   104   1e-20
sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding pro...   104   1e-20
gb|AAB61237.1| chlorophyll a/b-binding protein [Mesembryanthemum...   101   1e-19
gb|AGJ50622.1| chlorophyll a/b binding protein [Salicornia brach...   100   2e-19
gb|AAA33396.1| light-harvesting chlorophyll a/b protein precurso...   100   3e-19
emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 pr...   100   4e-19
emb|CAJ77391.1| major chlorophyll a/b binding protein LHCb1.1 [S...    97   2e-18
gb|AAB61238.1| chlorophyll a/b-binding protein [Mesembryanthemum...    97   3e-18
ref|XP_004234241.1| PREDICTED: uncharacterized protein LOC101245...    96   5e-18
ref|XP_004234063.1| PREDICTED: chlorophyll a-b binding protein 3...    96   7e-18
ref|XP_004234062.1| PREDICTED: chlorophyll a-b binding protein 3...    96   7e-18
ref|XP_004234058.1| PREDICTED: chlorophyll a-b binding protein 3...    96   7e-18
dbj|BAA25392.1| light harvesting chlorophyll a/b-binding protein...    95   9e-18
sp|P27495.1|CB24_TOBAC RecName: Full=Chlorophyll a-b binding pro...    95   9e-18
ref|XP_004303878.1| PREDICTED: chlorophyll a-b binding protein 4...    95   1e-17
sp|P12469.1|CB23_NICPL RecName: Full=Chlorophyll a-b binding pro...    95   1e-17

>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
           cathayensis]
          Length = 267

 Score =  110 bits (275), Expect = 2e-22
 Identities = 53/58 (91%), Positives = 57/58 (98%)
 Frame = +1

Query: 55  MAASTMALSSPSLAGKAVKLAPSASDLLGEGRVTMRKTAGKPKPVSSSSPWYGPDRVK 228
           MAASTMALSSPSLAG+A+KLAPS+SDLLGEGRVTMRKTAG+PKPVSS SPWYGPDRVK
Sbjct: 1   MAASTMALSSPSLAGQAIKLAPSSSDLLGEGRVTMRKTAGRPKPVSSGSPWYGPDRVK 58


>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Cucumis sativus] gi|449525484|ref|XP_004169747.1|
           PREDICTED: chlorophyll a-b binding protein,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score =  107 bits (267), Expect = 2e-21
 Identities = 51/58 (87%), Positives = 56/58 (96%)
 Frame = +1

Query: 55  MAASTMALSSPSLAGKAVKLAPSASDLLGEGRVTMRKTAGKPKPVSSSSPWYGPDRVK 228
           MAAS+MALSSPS AG+AVKL+P+ASDLLGEGR+TMRKTAGKPKPVSS SPWYGPDRVK
Sbjct: 1   MAASSMALSSPSFAGQAVKLSPTASDLLGEGRITMRKTAGKPKPVSSGSPWYGPDRVK 58


>gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pachysandra
           terminalis]
          Length = 267

 Score =  105 bits (261), Expect = 9e-21
 Identities = 51/58 (87%), Positives = 55/58 (94%)
 Frame = +1

Query: 55  MAASTMALSSPSLAGKAVKLAPSASDLLGEGRVTMRKTAGKPKPVSSSSPWYGPDRVK 228
           MA+STMALSSPSLAGKAVKLAPSAS+LLG GRV+MRKT G+PKPVSS SPWYGPDRVK
Sbjct: 1   MASSTMALSSPSLAGKAVKLAPSASELLGVGRVSMRKTGGRPKPVSSGSPWYGPDRVK 58


>ref|XP_002285646.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic [Vitis
           vinifera] gi|147833686|emb|CAN73057.1| hypothetical
           protein VITISV_007597 [Vitis vinifera]
          Length = 267

 Score =  104 bits (260), Expect = 1e-20
 Identities = 52/58 (89%), Positives = 54/58 (93%)
 Frame = +1

Query: 55  MAASTMALSSPSLAGKAVKLAPSASDLLGEGRVTMRKTAGKPKPVSSSSPWYGPDRVK 228
           MAASTMALSSPSLAGKA+KLAPSASDLLGEGRVTMRKT G+ KPVSS SPWYG DRVK
Sbjct: 1   MAASTMALSSPSLAGKALKLAPSASDLLGEGRVTMRKTGGRAKPVSSGSPWYGTDRVK 58


>emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea]
          Length = 267

 Score =  104 bits (260), Expect = 1e-20
 Identities = 50/58 (86%), Positives = 55/58 (94%)
 Frame = +1

Query: 55  MAASTMALSSPSLAGKAVKLAPSASDLLGEGRVTMRKTAGKPKPVSSSSPWYGPDRVK 228
           MA+STMALSSPSLAGKA+KL P+AS++LGEGRVTMRKTAGKPK VSS SPWYGPDRVK
Sbjct: 1   MASSTMALSSPSLAGKAIKLGPTASEILGEGRVTMRKTAGKPKNVSSGSPWYGPDRVK 58


>sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
           AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
           Precursor gi|14240|emb|CAA32526.1| chlorophyll a/b
           binding protein precursor [Spinacia oleracea]
           gi|193783447|emb|CAJ77389.3| major chlorophyll a/b
           binding protein LHCb1.3 [Spinacia oleracea]
          Length = 267

 Score =  104 bits (259), Expect = 1e-20
 Identities = 49/58 (84%), Positives = 55/58 (94%)
 Frame = +1

Query: 55  MAASTMALSSPSLAGKAVKLAPSASDLLGEGRVTMRKTAGKPKPVSSSSPWYGPDRVK 228
           MA+STMALSSPSLAGKAVKL P+AS+++GEGR+TMRKTAGKPK V SSSPWYGPDRVK
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVK 58


>gb|AAB61237.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
          Length = 267

 Score =  101 bits (252), Expect = 1e-19
 Identities = 49/58 (84%), Positives = 54/58 (93%)
 Frame = +1

Query: 55  MAASTMALSSPSLAGKAVKLAPSASDLLGEGRVTMRKTAGKPKPVSSSSPWYGPDRVK 228
           MA+STMALSSPSLAGK VKLAP+AS++LGEGR+TMRKTAGK K VSS SPWYGPDRVK
Sbjct: 1   MASSTMALSSPSLAGKMVKLAPTASEILGEGRITMRKTAGKTKSVSSDSPWYGPDRVK 58


>gb|AGJ50622.1| chlorophyll a/b binding protein [Salicornia brachiata]
          Length = 267

 Score =  100 bits (250), Expect = 2e-19
 Identities = 47/58 (81%), Positives = 54/58 (93%)
 Frame = +1

Query: 55  MAASTMALSSPSLAGKAVKLAPSASDLLGEGRVTMRKTAGKPKPVSSSSPWYGPDRVK 228
           MA+STMALSSPSLAGK +KL P+A+++LGEGRVTMRKTAGKPK V+S SPWYGPDRVK
Sbjct: 1   MASSTMALSSPSLAGKPIKLGPNAAEILGEGRVTMRKTAGKPKQVASGSPWYGPDRVK 58


>gb|AAA33396.1| light-harvesting chlorophyll a/b protein precursor [Lemna gibba]
          Length = 266

 Score =  100 bits (248), Expect = 3e-19
 Identities = 47/56 (83%), Positives = 53/56 (94%)
 Frame = +1

Query: 61  ASTMALSSPSLAGKAVKLAPSASDLLGEGRVTMRKTAGKPKPVSSSSPWYGPDRVK 228
           A++MALSSPSL GKAVKLAP+AS++ GEGRV+MRKTAGKPKPVSS SPWYGPDRVK
Sbjct: 2   AASMALSSPSLVGKAVKLAPAASEVFGEGRVSMRKTAGKPKPVSSGSPWYGPDRVK 57


>emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 precursor [Spinacia
           oleracea]
          Length = 267

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 47/58 (81%), Positives = 54/58 (93%)
 Frame = +1

Query: 55  MAASTMALSSPSLAGKAVKLAPSASDLLGEGRVTMRKTAGKPKPVSSSSPWYGPDRVK 228
           MA+++MALSSPSLAGKA+KL P+AS++L EGRVTMRKTAGKPK VSS SPWYGPDRVK
Sbjct: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVK 58


>emb|CAJ77391.1| major chlorophyll a/b binding protein LHCb1.1 [Spinacia oleracea]
           gi|283549607|emb|CAX64457.1| major chlorophyll a/b
           binding protein LHCb1.1 precursor [Spinacia oleracea]
          Length = 267

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 45/58 (77%), Positives = 52/58 (89%)
 Frame = +1

Query: 55  MAASTMALSSPSLAGKAVKLAPSASDLLGEGRVTMRKTAGKPKPVSSSSPWYGPDRVK 228
           MA+STMALSSP+  GKAVKL PS SD++GEGR++MRK+AGKPK VSS SPWYGPDRVK
Sbjct: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVK 58


>gb|AAB61238.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
          Length = 267

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 47/58 (81%), Positives = 51/58 (87%)
 Frame = +1

Query: 55  MAASTMALSSPSLAGKAVKLAPSASDLLGEGRVTMRKTAGKPKPVSSSSPWYGPDRVK 228
           MA+S MALSSPSLAGKAVKL P+ S +LGEGR+TMRKTAGK K VSS SPWYGPDRVK
Sbjct: 1   MASSAMALSSPSLAGKAVKLNPTTSQILGEGRITMRKTAGKTKNVSSDSPWYGPDRVK 58


>ref|XP_004234241.1| PREDICTED: uncharacterized protein LOC101245729 [Solanum
           lycopersicum]
          Length = 554

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 45/58 (77%), Positives = 51/58 (87%)
 Frame = +1

Query: 55  MAASTMALSSPSLAGKAVKLAPSASDLLGEGRVTMRKTAGKPKPVSSSSPWYGPDRVK 228
           MAASTMALSS + AGKAVKL+PS+S++ G GR+TMRKTA KPKP SS SPWYGPDRVK
Sbjct: 1   MAASTMALSSSTFAGKAVKLSPSSSEISGNGRITMRKTAAKPKPASSGSPWYGPDRVK 58



 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 44/58 (75%), Positives = 49/58 (84%)
 Frame = +1

Query: 55  MAASTMALSSPSLAGKAVKLAPSASDLLGEGRVTMRKTAGKPKPVSSSSPWYGPDRVK 228
           MA STMALSS + AGKAVKL+PS+S++ G GRVTMRKTA K KP SS SPWYGPDRVK
Sbjct: 288 MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVK 345


>ref|XP_004234063.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           isoform 6 [Solanum lycopersicum]
          Length = 244

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 45/58 (77%), Positives = 50/58 (86%)
 Frame = +1

Query: 55  MAASTMALSSPSLAGKAVKLAPSASDLLGEGRVTMRKTAGKPKPVSSSSPWYGPDRVK 228
           MAASTMALSS + AGK VKLAPS+S++ G GR+TMRKTA KPKP SS SPWYGPDRVK
Sbjct: 1   MAASTMALSSSTFAGKTVKLAPSSSEISGNGRITMRKTAAKPKPASSGSPWYGPDRVK 58


>ref|XP_004234062.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           isoform 5 [Solanum lycopersicum]
          Length = 255

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 45/58 (77%), Positives = 50/58 (86%)
 Frame = +1

Query: 55  MAASTMALSSPSLAGKAVKLAPSASDLLGEGRVTMRKTAGKPKPVSSSSPWYGPDRVK 228
           MAASTMALSS + AGK VKLAPS+S++ G GR+TMRKTA KPKP SS SPWYGPDRVK
Sbjct: 1   MAASTMALSSSTFAGKTVKLAPSSSEISGNGRITMRKTAAKPKPASSGSPWYGPDRVK 58


>ref|XP_004234058.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           isoform 1 [Solanum lycopersicum]
           gi|460376546|ref|XP_004234059.1| PREDICTED: chlorophyll
           a-b binding protein 3C, chloroplastic-like isoform 2
           [Solanum lycopersicum] gi|460376548|ref|XP_004234060.1|
           PREDICTED: chlorophyll a-b binding protein 3C,
           chloroplastic-like isoform 3 [Solanum lycopersicum]
           gi|460376550|ref|XP_004234061.1| PREDICTED: chlorophyll
           a-b binding protein 3C, chloroplastic-like isoform 4
           [Solanum lycopersicum]
          Length = 267

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 45/58 (77%), Positives = 50/58 (86%)
 Frame = +1

Query: 55  MAASTMALSSPSLAGKAVKLAPSASDLLGEGRVTMRKTAGKPKPVSSSSPWYGPDRVK 228
           MAASTMALSS + AGK VKLAPS+S++ G GR+TMRKTA KPKP SS SPWYGPDRVK
Sbjct: 1   MAASTMALSSSTFAGKTVKLAPSSSEISGNGRITMRKTAAKPKPASSGSPWYGPDRVK 58


>dbj|BAA25392.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
           sylvestris]
          Length = 267

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 46/58 (79%), Positives = 51/58 (87%)
 Frame = +1

Query: 55  MAASTMALSSPSLAGKAVKLAPSASDLLGEGRVTMRKTAGKPKPVSSSSPWYGPDRVK 228
           MAASTMALSS S AGKAVKL+PS+S++ G G+VTMRKTA K KPVSS SPWYGPDRVK
Sbjct: 1   MAASTMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSGSPWYGPDRVK 58


>sp|P27495.1|CB24_TOBAC RecName: Full=Chlorophyll a-b binding protein 40, chloroplastic;
           AltName: Full=LHCII type I CAB-40; Short=LHCP; Flags:
           Precursor gi|19829|emb|CAA36958.1| unnamed protein
           product [Nicotiana tabacum]
          Length = 267

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 46/58 (79%), Positives = 51/58 (87%)
 Frame = +1

Query: 55  MAASTMALSSPSLAGKAVKLAPSASDLLGEGRVTMRKTAGKPKPVSSSSPWYGPDRVK 228
           MAASTMALSSPS AGKAVKL+PS+S++ G G+VTMRKTA K K VSS SPWYGPDRVK
Sbjct: 1   MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVK 58


>ref|XP_004303878.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 267

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 45/58 (77%), Positives = 52/58 (89%)
 Frame = +1

Query: 55  MAASTMALSSPSLAGKAVKLAPSASDLLGEGRVTMRKTAGKPKPVSSSSPWYGPDRVK 228
           MAASTMALSSPSLAG+AV+L+P+AS++ GEGR+TMRKT  K K VSS SPWYGPDRVK
Sbjct: 1   MAASTMALSSPSLAGQAVQLSPAASNIFGEGRITMRKTGAKSKAVSSGSPWYGPDRVK 58


>sp|P12469.1|CB23_NICPL RecName: Full=Chlorophyll a-b binding protein C, chloroplastic;
           AltName: Full=LHCII type I CAB-C; Short=LHCP; Flags:
           Precursor gi|170210|gb|AAA34055.1| chlorophyll
           a/b-binding protein-C [Nicotiana plumbaginifolia]
          Length = 267

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 46/58 (79%), Positives = 52/58 (89%)
 Frame = +1

Query: 55  MAASTMALSSPSLAGKAVKLAPSASDLLGEGRVTMRKTAGKPKPVSSSSPWYGPDRVK 228
           MAASTMALSS S AGKAVKL+PS+S++ G G+VTMRKTA K KPVSSSSPWYGP+RVK
Sbjct: 1   MAASTMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVK 58


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