BLASTX nr result
ID: Akebia22_contig00005573
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia22_contig00005573
(1226 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 242 2e-68
emb|CBI33876.3| unnamed protein product [Vitis vinifera] 242 2e-68
ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ri... 225 2e-62
ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 223 7e-62
ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 223 7e-62
ref|XP_006368391.1| 33 kDa ribonucleoprotein [Populus trichocarp... 208 3e-58
gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides] 208 6e-58
ref|XP_007039474.1| RNA-binding family protein isoform 1 [Theobr... 206 5e-57
ref|XP_006428430.1| hypothetical protein CICLE_v10012439mg [Citr... 205 6e-56
gb|EXB32996.1| 31 kDa ribonucleoprotein [Morus notabilis] 209 6e-55
ref|XP_007209418.1| hypothetical protein PRUPE_ppa009362mg [Prun... 204 4e-54
ref|XP_004245902.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 206 7e-54
ref|NP_001242808.1| uncharacterized protein LOC100793319 [Glycin... 203 1e-53
ref|XP_003534278.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop... 203 2e-53
ref|XP_004301780.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 205 2e-53
ref|XP_006352864.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 204 7e-53
ref|XP_006294626.1| hypothetical protein CARUB_v10023663mg [Caps... 197 1e-51
ref|XP_006838538.1| hypothetical protein AMTR_s00002p00197820 [A... 194 2e-51
ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein... 196 3e-51
ref|XP_002879549.1| hypothetical protein ARALYDRAFT_482506 [Arab... 195 3e-51
>ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic [Vitis
vinifera]
Length = 288
Score = 242 bits (617), Expect(2) = 2e-68
Identities = 124/175 (70%), Positives = 141/175 (80%), Gaps = 3/175 (1%)
Frame = +2
Query: 329 TVKDVEIIKQKNGRSRGFAFITMSSGDEARAVIEKFDSYELSGRIIKVEFAKRMKKXXXX 508
TV DVEIIKQK+GRSRG+AF+TM SG+EA+AV+EKFDSYELSGRII+VEFAKR KK
Sbjct: 114 TVTDVEIIKQKDGRSRGYAFVTMDSGEEAQAVVEKFDSYELSGRIIRVEFAKRFKKPSPP 173
Query: 509 XXXXXXXV---ETRHKLYVSNLAWKARSSHLREFFSSSFNPVSARVVFDSPSGRSAGYGF 679
ETRHKLYVSNLAWK RS+HLREFFSS+FNPVS RVVFDSPSGRS GYGF
Sbjct: 174 PPPPPAGPPAGETRHKLYVSNLAWKVRSTHLREFFSSNFNPVSVRVVFDSPSGRSGGYGF 233
Query: 680 LSFATKEEAEAALSAMDGKELLGRPVRLKFSLKNVNXXXXXXXXXDNAKGQPEEA 844
SFATKEEAEAA+SA+DGKEL+GRPV LKFS+K ++ D ++GQPEEA
Sbjct: 234 ASFATKEEAEAAISALDGKELMGRPVHLKFSVKTIDESGDEKEEGDISEGQPEEA 288
Score = 45.8 bits (107), Expect(2) = 2e-68
Identities = 23/40 (57%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +3
Query: 210 FGFELYSTVQEISVEETEERILEDN-RRKLYIFNLPWSFS 326
F FEL S+VQEI VE E+ E N +RKL++ NLPWS S
Sbjct: 62 FSFELCSSVQEIEVEAKPEQTQEPNQKRKLFVLNLPWSLS 101
>emb|CBI33876.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 242 bits (617), Expect(2) = 2e-68
Identities = 124/175 (70%), Positives = 141/175 (80%), Gaps = 3/175 (1%)
Frame = +2
Query: 329 TVKDVEIIKQKNGRSRGFAFITMSSGDEARAVIEKFDSYELSGRIIKVEFAKRMKKXXXX 508
TV DVEIIKQK+GRSRG+AF+TM SG+EA+AV+EKFDSYELSGRII+VEFAKR KK
Sbjct: 84 TVTDVEIIKQKDGRSRGYAFVTMDSGEEAQAVVEKFDSYELSGRIIRVEFAKRFKKPSPP 143
Query: 509 XXXXXXXV---ETRHKLYVSNLAWKARSSHLREFFSSSFNPVSARVVFDSPSGRSAGYGF 679
ETRHKLYVSNLAWK RS+HLREFFSS+FNPVS RVVFDSPSGRS GYGF
Sbjct: 144 PPPPPAGPPAGETRHKLYVSNLAWKVRSTHLREFFSSNFNPVSVRVVFDSPSGRSGGYGF 203
Query: 680 LSFATKEEAEAALSAMDGKELLGRPVRLKFSLKNVNXXXXXXXXXDNAKGQPEEA 844
SFATKEEAEAA+SA+DGKEL+GRPV LKFS+K ++ D ++GQPEEA
Sbjct: 204 ASFATKEEAEAAISALDGKELMGRPVHLKFSVKTIDESGDEKEEGDISEGQPEEA 258
Score = 45.8 bits (107), Expect(2) = 2e-68
Identities = 23/40 (57%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +3
Query: 210 FGFELYSTVQEISVEETEERILEDN-RRKLYIFNLPWSFS 326
F FEL S+VQEI VE E+ E N +RKL++ NLPWS S
Sbjct: 32 FSFELCSSVQEIEVEAKPEQTQEPNQKRKLFVLNLPWSLS 71
>ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532973|gb|EEF34739.1| ribonucleoprotein,
chloroplast, putative [Ricinus communis]
Length = 278
Score = 225 bits (573), Expect(2) = 2e-62
Identities = 110/171 (64%), Positives = 139/171 (81%)
Frame = +2
Query: 329 TVKDVEIIKQKNGRSRGFAFITMSSGDEARAVIEKFDSYELSGRIIKVEFAKRMKKXXXX 508
TV DVEIIKQKNGRSRGFAF+T++SG+EA+A I+K DS+E+SGRII+VEFAKR+K
Sbjct: 108 TVTDVEIIKQKNGRSRGFAFVTLASGEEAQAAIDKLDSHEVSGRIIRVEFAKRLKPPSPP 167
Query: 509 XXXXXXXVETRHKLYVSNLAWKARSSHLREFFSSSFNPVSARVVFDSPSGRSAGYGFLSF 688
ETRHK+YVSNLAWK RS+HLREFFS++F+PVS+RVVFDSP+GRS+GYGF+SF
Sbjct: 168 SPTGTSARETRHKIYVSNLAWKVRSTHLREFFSTNFSPVSSRVVFDSPTGRSSGYGFVSF 227
Query: 689 ATKEEAEAALSAMDGKELLGRPVRLKFSLKNVNXXXXXXXXXDNAKGQPEE 841
AT+EEAEAA+SA+DGKEL+GRP+RLKFS + + +N + Q E+
Sbjct: 228 ATREEAEAAISALDGKELMGRPLRLKFSDRKTDESESENQEEENVEDQSEQ 278
Score = 42.7 bits (99), Expect(2) = 2e-62
Identities = 22/38 (57%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +3
Query: 216 FELYSTVQEISV-EETEERILEDNRRKLYIFNLPWSFS 326
FE +ST QEI + EET+E +RKLY+FNLPWS S
Sbjct: 61 FERFSTAQEIMIPEETQETT---QKRKLYVFNLPWSLS 95
>ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 288
Score = 223 bits (569), Expect(2) = 7e-62
Identities = 113/172 (65%), Positives = 139/172 (80%)
Frame = +2
Query: 329 TVKDVEIIKQKNGRSRGFAFITMSSGDEARAVIEKFDSYELSGRIIKVEFAKRMKKXXXX 508
TV DVEIIKQKNGRSRGFAF+TM+S DEA+A I+KFDS E+SGR+IKVEFAKR+KK
Sbjct: 119 TVSDVEIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRLKKPPPP 178
Query: 509 XXXXXXXVETRHKLYVSNLAWKARSSHLREFFSSSFNPVSARVVFDSPSGRSAGYGFLSF 688
ET +KLYVSNLAWK RS++LR+FFS +FNP++ARVVFDSP+GRSAGYGF+SF
Sbjct: 179 KPPGPPPGETVNKLYVSNLAWKVRSNNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSF 238
Query: 689 ATKEEAEAALSAMDGKELLGRPVRLKFSLKNVNXXXXXXXXXDNAKGQPEEA 844
AT+EEA+ ALS+++GKEL+GRP+RLKFS +NVN D + QPEE+
Sbjct: 239 ATREEAQTALSSLEGKELMGRPLRLKFSERNVN--EAETPKEDIVESQPEES 288
Score = 42.4 bits (98), Expect(2) = 7e-62
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +3
Query: 213 GFELYSTVQEISVEETEERILEDN-RRKLYIFNLPWSFS 326
G L S +QE+++EE E + N +RKLYIFNLPWS S
Sbjct: 68 GARLCSALQEVTLEEASEENQDVNQKRKLYIFNLPWSLS 106
>ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like [Cucumis
sativus]
Length = 282
Score = 223 bits (569), Expect(2) = 7e-62
Identities = 113/172 (65%), Positives = 139/172 (80%)
Frame = +2
Query: 329 TVKDVEIIKQKNGRSRGFAFITMSSGDEARAVIEKFDSYELSGRIIKVEFAKRMKKXXXX 508
TV DVEIIKQKNGRSRGFAF+TM+S DEA+A I+KFDS E+SGR+IKVEFAKR+KK
Sbjct: 113 TVSDVEIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRLKKPPPP 172
Query: 509 XXXXXXXVETRHKLYVSNLAWKARSSHLREFFSSSFNPVSARVVFDSPSGRSAGYGFLSF 688
ET +KLYVSNLAWK RS++LR+FFS +FNP++ARVVFDSP+GRSAGYGF+SF
Sbjct: 173 KPPGPPPGETVNKLYVSNLAWKVRSNNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSF 232
Query: 689 ATKEEAEAALSAMDGKELLGRPVRLKFSLKNVNXXXXXXXXXDNAKGQPEEA 844
AT+EEA+ ALS+++GKEL+GRP+RLKFS +NVN D + QPEE+
Sbjct: 233 ATREEAQTALSSLEGKELMGRPLRLKFSERNVN--EAETPKEDIVESQPEES 282
Score = 42.4 bits (98), Expect(2) = 7e-62
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +3
Query: 213 GFELYSTVQEISVEETEERILEDN-RRKLYIFNLPWSFS 326
G L S +QE+++EE E + N +RKLYIFNLPWS S
Sbjct: 62 GARLCSALQEVTLEEASEENQDVNQKRKLYIFNLPWSLS 100
>ref|XP_006368391.1| 33 kDa ribonucleoprotein [Populus trichocarpa]
gi|550346304|gb|ERP64960.1| 33 kDa ribonucleoprotein
[Populus trichocarpa]
Length = 294
Score = 208 bits (529), Expect(2) = 3e-58
Identities = 106/175 (60%), Positives = 133/175 (76%), Gaps = 4/175 (2%)
Frame = +2
Query: 329 TVKDVEIIKQKNGRSRGFAFITMSSGDEARAVIEKFDSYELSGRIIKVEFAKRMKKXXXX 508
TV DVEIIKQKNGRSRGFAF+TM++G+EA+A I+KF+S E+SGRII+VEFAKR+++
Sbjct: 119 TVSDVEIIKQKNGRSRGFAFVTMTTGEEAQAAIDKFNSLEVSGRIIRVEFAKRLRRPPSP 178
Query: 509 XXXXXXXV----ETRHKLYVSNLAWKARSSHLREFFSSSFNPVSARVVFDSPSGRSAGYG 676
ETRHKLY+SNLAWK R SHLREFFS++ NPVS+RVVFD P+GRS+GYG
Sbjct: 179 RLPGTPADIPAGETRHKLYISNLAWKVRGSHLREFFSTNCNPVSSRVVFDGPAGRSSGYG 238
Query: 677 FLSFATKEEAEAALSAMDGKELLGRPVRLKFSLKNVNXXXXXXXXXDNAKGQPEE 841
F+SFAT+EEA AA+SA GKEL+GRP+RLKFS + + ++ Q EE
Sbjct: 239 FVSFATREEAVAAISAFSGKELMGRPIRLKFSEDKADESGTEKKEEETSEVQLEE 293
Score = 45.8 bits (107), Expect(2) = 3e-58
Identities = 25/40 (62%), Positives = 31/40 (77%), Gaps = 3/40 (7%)
Frame = +3
Query: 216 FELYSTVQEISVEET--EERILEDN-RRKLYIFNLPWSFS 326
F+L STVQE++VE T EE I E N +RKL++ NLPWSFS
Sbjct: 67 FQLCSTVQEVTVEITPEEEEIQEANLKRKLFVVNLPWSFS 106
>gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 294
Score = 208 bits (529), Expect(2) = 6e-58
Identities = 106/175 (60%), Positives = 133/175 (76%), Gaps = 4/175 (2%)
Frame = +2
Query: 329 TVKDVEIIKQKNGRSRGFAFITMSSGDEARAVIEKFDSYELSGRIIKVEFAKRMKKXXXX 508
TV DVEIIKQKNGRSRGFAF+TM++G+EA+A I+KF+S E+SGRII+VEFAKR+++
Sbjct: 119 TVSDVEIIKQKNGRSRGFAFVTMTTGEEAQAAIDKFNSLEVSGRIIRVEFAKRLRRPPSP 178
Query: 509 XXXXXXXV----ETRHKLYVSNLAWKARSSHLREFFSSSFNPVSARVVFDSPSGRSAGYG 676
ETRHKLY+SNLAWK R SHLREFFS++ NPVS+RVVFD P+GRS+GYG
Sbjct: 179 RLPGTPADIPAGETRHKLYISNLAWKVRGSHLREFFSTNCNPVSSRVVFDGPAGRSSGYG 238
Query: 677 FLSFATKEEAEAALSAMDGKELLGRPVRLKFSLKNVNXXXXXXXXXDNAKGQPEE 841
F+SFAT+EEA AA+SA GKEL+GRP+RLKFS + + ++ Q EE
Sbjct: 239 FVSFATREEAVAAISAFSGKELMGRPIRLKFSEDKADESGTEKKEEETSEVQLEE 293
Score = 44.7 bits (104), Expect(2) = 6e-58
Identities = 24/40 (60%), Positives = 31/40 (77%), Gaps = 3/40 (7%)
Frame = +3
Query: 216 FELYSTVQEISVEET--EERILEDN-RRKLYIFNLPWSFS 326
F+L STVQE+++E T EE I E N +RKL++ NLPWSFS
Sbjct: 67 FQLCSTVQEVTMEITPEEEEIQEANLKRKLFVVNLPWSFS 106
>ref|XP_007039474.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508776719|gb|EOY23975.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 281
Score = 206 bits (524), Expect(2) = 5e-57
Identities = 104/169 (61%), Positives = 131/169 (77%)
Frame = +2
Query: 332 VKDVEIIKQKNGRSRGFAFITMSSGDEARAVIEKFDSYELSGRIIKVEFAKRMKKXXXXX 511
V DVEIIKQK+GRSR FAF+TM+SG+EA+A ++K DS+E+S RII+VEFA+R KK
Sbjct: 114 VTDVEIIKQKDGRSRNFAFVTMASGEEAQAAVDKLDSHEVSARIIRVEFARRFKKPSPSP 173
Query: 512 XXXXXXVETRHKLYVSNLAWKARSSHLREFFSSSFNPVSARVVFDSPSGRSAGYGFLSFA 691
ET HKLYVSNLAWK RSSHLREFF S+FNPV+ARV+F +PSG+SAGYGF+SFA
Sbjct: 174 QPIVPPRETHHKLYVSNLAWKVRSSHLREFF-SAFNPVAARVIFGTPSGQSAGYGFVSFA 232
Query: 692 TKEEAEAALSAMDGKELLGRPVRLKFSLKNVNXXXXXXXXXDNAKGQPE 838
TKEEA+AA+S ++GKEL+ RP+RLKFS +NV+ +GQ +
Sbjct: 233 TKEEADAAISTLNGKELMDRPLRLKFSERNVDESGGEKKEEKEREGQTD 281
Score = 43.5 bits (101), Expect(2) = 5e-57
Identities = 20/39 (51%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Frame = +3
Query: 213 GFELYSTVQEISVEETEERILEDN-RRKLYIFNLPWSFS 326
GF L STVQE++VE E+ + N +RKL++ NLPWS++
Sbjct: 62 GFLLCSTVQEVNVEAETEKTQKSNVKRKLFVLNLPWSYT 100
>ref|XP_006428430.1| hypothetical protein CICLE_v10012439mg [Citrus clementina]
gi|567871683|ref|XP_006428431.1| hypothetical protein
CICLE_v10012439mg [Citrus clementina]
gi|567871685|ref|XP_006428432.1| hypothetical protein
CICLE_v10012439mg [Citrus clementina]
gi|568877400|ref|XP_006491727.1| PREDICTED:
ribonucleoprotein At2g37220, chloroplastic-like isoform
X1 [Citrus sinensis] gi|568877402|ref|XP_006491728.1|
PREDICTED: ribonucleoprotein At2g37220,
chloroplastic-like isoform X2 [Citrus sinensis]
gi|568877404|ref|XP_006491729.1| PREDICTED:
ribonucleoprotein At2g37220, chloroplastic-like isoform
X3 [Citrus sinensis] gi|557530487|gb|ESR41670.1|
hypothetical protein CICLE_v10012439mg [Citrus
clementina] gi|557530488|gb|ESR41671.1| hypothetical
protein CICLE_v10012439mg [Citrus clementina]
gi|557530489|gb|ESR41672.1| hypothetical protein
CICLE_v10012439mg [Citrus clementina]
Length = 275
Score = 205 bits (522), Expect(2) = 6e-56
Identities = 102/172 (59%), Positives = 132/172 (76%)
Frame = +2
Query: 329 TVKDVEIIKQKNGRSRGFAFITMSSGDEARAVIEKFDSYELSGRIIKVEFAKRMKKXXXX 508
TV DVEIIK K G++R FAF+TM+S +EA+A + +FD+ E+SGRII+VEFAK+ KK
Sbjct: 104 TVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQ 163
Query: 509 XXXXXXXVETRHKLYVSNLAWKARSSHLREFFSSSFNPVSARVVFDSPSGRSAGYGFLSF 688
ET+HKLYVSNL+WK RS+HLREFFS++FNPVS++VVF+S GRSAGYGF+SF
Sbjct: 164 RSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSF 223
Query: 689 ATKEEAEAALSAMDGKELLGRPVRLKFSLKNVNXXXXXXXXXDNAKGQPEEA 844
ATKEEAEAA+S++DGKEL+GRP+RLKF KN + D ++ Q E+
Sbjct: 224 ATKEEAEAAISSLDGKELMGRPLRLKFGQKNDDVSESNKEEEDVSEDQSAES 275
Score = 40.8 bits (94), Expect(2) = 6e-56
Identities = 18/37 (48%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Frame = +3
Query: 219 ELYSTVQEISVEETEERILEDN-RRKLYIFNLPWSFS 326
++ ST+Q+ +V+ E+ + N RRK+Y+FNLPWSFS
Sbjct: 55 QVCSTLQDTTVQTKPEQTQKQNIRRKIYVFNLPWSFS 91
>gb|EXB32996.1| 31 kDa ribonucleoprotein [Morus notabilis]
Length = 295
Score = 209 bits (533), Expect(2) = 6e-55
Identities = 107/181 (59%), Positives = 135/181 (74%)
Frame = +2
Query: 329 TVKDVEIIKQKNGRSRGFAFITMSSGDEARAVIEKFDSYELSGRIIKVEFAKRMKKXXXX 508
TV DVEIIKQK+GR+RGFAF+TM+ G+EA+AVI++F+ ++SGRIIK+E AK+ KK
Sbjct: 119 TVTDVEIIKQKDGRNRGFAFVTMACGEEAQAVIDRFNLQDVSGRIIKIELAKQFKKPSPP 178
Query: 509 XXXXXXXVETRHKLYVSNLAWKARSSHLREFFSSSFNPVSARVVFDSPSGRSAGYGFLSF 688
ET HKLYVSN+ WK RS+HLR+F S +F PVSARVVFD P GRSAGYGF+SF
Sbjct: 179 RPPGPQPGETTHKLYVSNIEWKVRSTHLRDFVSENFKPVSARVVFDGPKGRSAGYGFVSF 238
Query: 689 ATKEEAEAALSAMDGKELLGRPVRLKFSLKNVNXXXXXXXXXDNAKGQPEEASNAIEKTE 868
AT+EEAEAA+S++DGKEL+GRP+RLKFS KN D + Q EE + + +TE
Sbjct: 239 ATREEAEAAISSLDGKELMGRPLRLKFSEKNAG-----EKNVDETENQKEEETVSEGQTE 293
Query: 869 E 871
E
Sbjct: 294 E 294
Score = 33.1 bits (74), Expect(2) = 6e-55
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 4/34 (11%)
Frame = +3
Query: 237 QEISVEE-TEERILE---DNRRKLYIFNLPWSFS 326
QEI+V+E EE LE + +RKLY+ NLPWS +
Sbjct: 73 QEIAVQEKAEETHLEKENNQKRKLYVVNLPWSLT 106
>ref|XP_007209418.1| hypothetical protein PRUPE_ppa009362mg [Prunus persica]
gi|462405153|gb|EMJ10617.1| hypothetical protein
PRUPE_ppa009362mg [Prunus persica]
Length = 295
Score = 204 bits (520), Expect(2) = 4e-54
Identities = 108/172 (62%), Positives = 130/172 (75%), Gaps = 1/172 (0%)
Frame = +2
Query: 329 TVKDVEIIKQKNGRSRGFAFITMSSGDEARAVIEKFDSYELSGRIIKVEFAKRMKKXXXX 508
TV DVEIIKQ NG+SRGFAF+TM+SG+EA+AVIEKF S+E+ R I+VEFAK+ KK
Sbjct: 124 TVTDVEIIKQPNGKSRGFAFVTMASGEEAQAVIEKFHSHEVLDRTIRVEFAKQFKKPSPP 183
Query: 509 XXXXXXXVETRHKLYVSNLAWKARSSHLREFFSSSFN-PVSARVVFDSPSGRSAGYGFLS 685
VETR+KLYVSNL WK RSSHLR+F S +F PVSARVVF PSG+S GYGFLS
Sbjct: 184 PPNPQI-VETRYKLYVSNLGWKVRSSHLRDFVSENFKVPVSARVVFSGPSGKSGGYGFLS 242
Query: 686 FATKEEAEAALSAMDGKELLGRPVRLKFSLKNVNXXXXXXXXXDNAKGQPEE 841
FATKEEAE+A+S+++GKEL+GRP+ LKFS KN + +GQPEE
Sbjct: 243 FATKEEAESAISSLNGKELMGRPLNLKFSEKNDRNSGSQKDEEEKFEGQPEE 294
Score = 35.4 bits (80), Expect(2) = 4e-54
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 7/44 (15%)
Frame = +3
Query: 216 FELY-STVQEISVEE------TEERILEDNRRKLYIFNLPWSFS 326
FEL S VQE++ EE EE ++ +RKLY+ NLPWS +
Sbjct: 68 FELMCSAVQEVTAEEEAVEEKAEETQTQNLKRKLYVVNLPWSLT 111
>ref|XP_004245902.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Solanum
lycopersicum]
Length = 285
Score = 206 bits (524), Expect(2) = 7e-54
Identities = 104/153 (67%), Positives = 127/153 (83%), Gaps = 1/153 (0%)
Frame = +2
Query: 332 VKDVEIIKQKNGRSRGFAFITMSSGDEARAVIEKFDSYELSGRIIKVEFAKRMKKXXXXX 511
V DVEIIK K+G+SRGFAF+TMSSG+EA+A I+K DSYE+SGRII+VEFAKR KK
Sbjct: 116 VDDVEIIKTKDGKSRGFAFVTMSSGEEAQAAIDKLDSYEVSGRIIRVEFAKRFKKPPGAP 175
Query: 512 XXXXXXV-ETRHKLYVSNLAWKARSSHLREFFSSSFNPVSARVVFDSPSGRSAGYGFLSF 688
E RHKLYVSNLAWK RS+ LREFFS++ NP+SARVVFD+ SGR+AGYGF++F
Sbjct: 176 PPSTPPQGEARHKLYVSNLAWKVRSTQLREFFSANNNPISARVVFDNASGRAAGYGFVTF 235
Query: 689 ATKEEAEAALSAMDGKELLGRPVRLKFSLKNVN 787
TKE+AEAALSA+DGKEL+GRP+RLKFS ++ +
Sbjct: 236 DTKEQAEAALSALDGKELMGRPIRLKFSERDAD 268
Score = 33.1 bits (74), Expect(2) = 7e-54
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +3
Query: 231 TVQEISVEETEERILEDNRRKLYIFNLPWSFS 326
TVQE E+TE+ + RRKL++ NLPWS +
Sbjct: 74 TVQE---EKTEKPQKNNQRRKLFVLNLPWSLT 102
>ref|NP_001242808.1| uncharacterized protein LOC100793319 [Glycine max]
gi|255639879|gb|ACU20232.1| unknown [Glycine max]
Length = 289
Score = 203 bits (517), Expect(2) = 1e-53
Identities = 107/183 (58%), Positives = 130/183 (71%), Gaps = 2/183 (1%)
Frame = +2
Query: 329 TVKDVEIIKQKNGRSRGFAFITMSSGDEARAVIEKFDSYELSGRIIKVEFAKRMKKXXXX 508
TV DVEIIK K+GRS+G+AF+TM+SG+EA+A ++KFDSYELSGRII+VE AKR KK
Sbjct: 105 TVTDVEIIKSKDGRSKGYAFVTMASGEEAQAAVDKFDSYELSGRIIRVELAKRFKKPPSP 164
Query: 509 XXXXXXXV-ETRHKLYVSNLAWKARSSHLREFFSSSFN-PVSARVVFDSPSGRSAGYGFL 682
ETRH +Y SNLAWKARS+HLR+ F+ +F P SARVVFDSPSGRSAGYGF+
Sbjct: 165 PPPPGPRPGETRHVIYASNLAWKARSTHLRQLFAENFKTPSSARVVFDSPSGRSAGYGFV 224
Query: 683 SFATKEEAEAALSAMDGKELLGRPVRLKFSLKNVNXXXXXXXXXDNAKGQPEEASNAIEK 862
SF TKE+AEAA+S +DGKEL+GRP+RLKFS K D G E+ +
Sbjct: 225 SFLTKEDAEAAISTVDGKELMGRPLRLKFSEKKDKAGREKDEDQDKDAGSEEDEDEGSDA 284
Query: 863 TEE 871
E
Sbjct: 285 RPE 287
Score = 35.0 bits (79), Expect(2) = 1e-53
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +3
Query: 216 FELYSTVQEISVEETEERILE--DNRRKLYIFNLPWSFS 326
F+L ST+QE++ E + + DN +KLY+ NL WS +
Sbjct: 54 FQLCSTLQEVAATEETPELTQPTDNVKKLYVVNLSWSLT 92
>ref|XP_003534278.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 282
Score = 203 bits (517), Expect(2) = 2e-53
Identities = 103/153 (67%), Positives = 126/153 (82%), Gaps = 2/153 (1%)
Frame = +2
Query: 329 TVKDVEIIKQKNGRSRGFAFITMSSGDEARAVIEKFDSYELSGRIIKVEFAKRMKKXXXX 508
TV DVEIIK K+GRS+G+AF+TM+SG+EA+A ++KFDSYELSGRII+VE AKR+KK
Sbjct: 98 TVTDVEIIKSKDGRSKGYAFVTMASGEEAQAAVDKFDSYELSGRIIRVELAKRLKKPPSL 157
Query: 509 XXXXXXXV-ETRHKLYVSNLAWKARSSHLREFFSSSFN-PVSARVVFDSPSGRSAGYGFL 682
ETRH +Y SNLAWKARS+HLR+ F+ +F P SARVVFDSPSGRSAGYGF+
Sbjct: 158 PPPPGPRPGETRHVIYASNLAWKARSTHLRQVFTENFKTPSSARVVFDSPSGRSAGYGFV 217
Query: 683 SFATKEEAEAALSAMDGKELLGRPVRLKFSLKN 781
SF T+E+AEAA+S +DGKEL+GRP+RLKFS KN
Sbjct: 218 SFLTREDAEAAISTVDGKELMGRPLRLKFSEKN 250
Score = 34.3 bits (77), Expect(2) = 2e-53
Identities = 19/39 (48%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Frame = +3
Query: 216 FELYSTVQEIS-VEETEERILE-DNRRKLYIFNLPWSFS 326
F+L ST+QE++ E+T E I DN +KLY+ NL WS +
Sbjct: 47 FQLCSTLQEVAPTEQTLEPIQPTDNVKKLYVVNLSWSLT 85
>ref|XP_004301780.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 299
Score = 205 bits (521), Expect(2) = 2e-53
Identities = 111/181 (61%), Positives = 136/181 (75%), Gaps = 1/181 (0%)
Frame = +2
Query: 332 VKDVEIIKQKNGRSRGFAFITMSSGDEARAVIEKFDSYELSGRIIKVEFAKRMKKXXXXX 511
VKDVEIIKQ +GR+RGFAF+TM+SG+EA+AVI+KFDS ELSGR +KVEFAK+ KK
Sbjct: 119 VKDVEIIKQMDGRNRGFAFVTMASGEEAQAVIDKFDSQELSGRTVKVEFAKQFKKPTPRP 178
Query: 512 XXXXXXVETRHKLYVSNLAWKARSSHLREFFSSSF-NPVSARVVFDSPSGRSAGYGFLSF 688
ETR+KLYVSNLAWKARSSHLR+F S +F PVSARVVFD PSG+S GYGF+SF
Sbjct: 179 STPKVQ-ETRYKLYVSNLAWKARSSHLRDFVSLNFKTPVSARVVFDGPSGKSVGYGFVSF 237
Query: 689 ATKEEAEAALSAMDGKELLGRPVRLKFSLKNVNXXXXXXXXXDNAKGQPEEASNAIEKTE 868
A EEAE A+SA++G+EL+GRPV LKFS KN+ ++ + ++ SN EK E
Sbjct: 238 ARMEEAEEAISALNGQELMGRPVTLKFSEKNIG---------ESTNQEEKDNSNQEEKVE 288
Query: 869 E 871
E
Sbjct: 289 E 289
Score = 32.3 bits (72), Expect(2) = 2e-53
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 10/45 (22%)
Frame = +3
Query: 222 LYSTVQEISVEETEERILEDN----------RRKLYIFNLPWSFS 326
L S VQEI+ +E E+ E +RKLY+ NLPWS +
Sbjct: 61 LCSAVQEITTQEEEQAEQESAEEKTQKQQNLKRKLYVVNLPWSLT 105
>ref|XP_006352864.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Solanum
tuberosum]
Length = 284
Score = 204 bits (519), Expect(2) = 7e-53
Identities = 101/153 (66%), Positives = 127/153 (83%), Gaps = 1/153 (0%)
Frame = +2
Query: 332 VKDVEIIKQKNGRSRGFAFITMSSGDEARAVIEKFDSYELSGRIIKVEFAKRMKKXXXXX 511
V DVEIIK ++G+SRGFAF+TMSSG+EA+A I+K DSYE+ GRII+VEFAKR KK
Sbjct: 115 VDDVEIIKTEDGKSRGFAFVTMSSGEEAQAAIDKLDSYEVLGRIIRVEFAKRFKKPPGAP 174
Query: 512 XXXXXXV-ETRHKLYVSNLAWKARSSHLREFFSSSFNPVSARVVFDSPSGRSAGYGFLSF 688
E RHKLYVSNLAWK RS+ LREFFS+++NP+SARV+FD+ SGR+AGYGF+SF
Sbjct: 175 PPSTPPQGEARHKLYVSNLAWKVRSTQLREFFSANYNPISARVIFDNASGRAAGYGFVSF 234
Query: 689 ATKEEAEAALSAMDGKELLGRPVRLKFSLKNVN 787
TKE+AEAA+SA+DGKEL+GRP+RLKFS ++ +
Sbjct: 235 DTKEQAEAAVSALDGKELMGRPIRLKFSERDAD 267
Score = 31.6 bits (70), Expect(2) = 7e-53
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +3
Query: 231 TVQEISVEETEERILEDNRRKLYIFNLPWSFS 326
TVQE E+TE+ + RRKL++ NLPWS +
Sbjct: 72 TVQE--EEKTEKPQKNNLRRKLFVLNLPWSLT 101
>ref|XP_006294626.1| hypothetical protein CARUB_v10023663mg [Capsella rubella]
gi|482563334|gb|EOA27524.1| hypothetical protein
CARUB_v10023663mg [Capsella rubella]
Length = 318
Score = 197 bits (500), Expect(2) = 1e-51
Identities = 102/183 (55%), Positives = 134/183 (73%), Gaps = 6/183 (3%)
Frame = +2
Query: 329 TVKDVEIIKQKNGRSRGFAFITMSSGDEARAVIEKFDSYELSGRIIKVEFAKRMKKXXXX 508
TV +VEII+QK+G++RGFAF+TM+SG+EA+A ++KFD++E+SGRII+V FA+R KK
Sbjct: 119 TVNNVEIIRQKDGKNRGFAFVTMASGEEAQAAVDKFDAFEVSGRIIRVNFARRFKKPTPK 178
Query: 509 XXXXXXXV---ETRHKLYVSNLAWKARSSHLREFFSSS-FNPVSARVVFDSPSGRSAGYG 676
+TRHKLYVSNLAWKARS+HLRE F+++ FNPVSARVVF P GRS+GYG
Sbjct: 179 PPNALPSPPPGDTRHKLYVSNLAWKARSTHLRELFTAADFNPVSARVVFADPEGRSSGYG 238
Query: 677 FLSFATKEEAEAALSAMDGKELLGRPVRLKFSLKNVNXXXXXXXXXDN--AKGQPEEASN 850
F+SFAT+EEAE A++ +DGKE++GRP+ LKFSL + DN +K E N
Sbjct: 239 FVSFATREEAENAITKLDGKEIMGRPIILKFSLTTASESEDGDTVEDNNTSKDSDTEEDN 298
Query: 851 AIE 859
E
Sbjct: 299 TSE 301
Score = 35.0 bits (79), Expect(2) = 1e-51
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 228 STVQEISVEETEERILEDN-RRKLYIFNLPWSFS 326
ST E S E+ E + N +RKL++FNLPWS S
Sbjct: 73 STEDETSQEDKTEETQKSNLKRKLFVFNLPWSMS 106
>ref|XP_006838538.1| hypothetical protein AMTR_s00002p00197820 [Amborella trichopoda]
gi|548841044|gb|ERN01107.1| hypothetical protein
AMTR_s00002p00197820 [Amborella trichopoda]
Length = 280
Score = 194 bits (493), Expect(2) = 2e-51
Identities = 99/171 (57%), Positives = 127/171 (74%)
Frame = +2
Query: 332 VKDVEIIKQKNGRSRGFAFITMSSGDEARAVIEKFDSYELSGRIIKVEFAKRMKKXXXXX 511
VKDV+IIK KNG+SRGFAFITM S +EA A I+KFDSYEL GRII+V+FAKRMK
Sbjct: 114 VKDVDIIKHKNGKSRGFAFITMDSTEEAVAAIDKFDSYELMGRIIRVQFAKRMKPPRPDN 173
Query: 512 XXXXXXVETRHKLYVSNLAWKARSSHLREFFSSSFNPVSARVVFDSPSGRSAGYGFLSFA 691
++T +K+Y +NL WK RSSHLREFF ++ +PVSARVVFDSPSG+SAGYGF+ +A
Sbjct: 174 MV----MDTNYKIYATNLTWKVRSSHLREFFMATTSPVSARVVFDSPSGKSAGYGFIGYA 229
Query: 692 TKEEAEAALSAMDGKELLGRPVRLKFSLKNVNXXXXXXXXXDNAKGQPEEA 844
TKEEAEAA++ +GKEL+GRP+RL+ S + + + + Q EE+
Sbjct: 230 TKEEAEAAIAEFNGKELMGRPLRLQLSQRPPDEPDGESKVESDPEDQSEES 280
Score = 37.0 bits (84), Expect(2) = 2e-51
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3
Query: 252 EETEERILEDNRRKLYIFNLPWSFS 326
EE EE IL + +RKLY NLPW+FS
Sbjct: 76 EEEEEEILIEKKRKLYAENLPWTFS 100
>ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana] gi|3608147|gb|AAC36180.1| putative chloroplast
RNA binding protein precursor [Arabidopsis thaliana]
gi|14596023|gb|AAK68739.1| putative chloroplast RNA
binding protein precursor [Arabidopsis thaliana]
gi|23198314|gb|AAN15684.1| putative chloroplast RNA
binding protein precursor [Arabidopsis thaliana]
gi|330254012|gb|AEC09106.1| RNA-binding (RRM/RBD/RNP
motifs) family protein [Arabidopsis thaliana]
Length = 308
Score = 196 bits (498), Expect(2) = 3e-51
Identities = 101/181 (55%), Positives = 137/181 (75%), Gaps = 4/181 (2%)
Frame = +2
Query: 329 TVKDVEIIKQKNGRSRGFAFITMSSGDEARAVIEKFDSYELSGRIIKVEFAKRMKKXXXX 508
TV +VEII+QK+G++RGFAF+TM+SG+EA+A I+KFD++++SGRII V FA+R KK
Sbjct: 120 TVNNVEIIRQKDGKNRGFAFVTMASGEEAQAAIDKFDTFQVSGRIISVSFARRFKKPTPK 179
Query: 509 XXXXXXXV---ETRHKLYVSNLAWKARSSHLREFFSSS-FNPVSARVVFDSPSGRSAGYG 676
+TRHKLYVSNLAWKARS+HLRE F+++ FNPVSARVVF P GRS+GYG
Sbjct: 180 SPNDLPSPAPGDTRHKLYVSNLAWKARSTHLRELFTAADFNPVSARVVFADPEGRSSGYG 239
Query: 677 FLSFATKEEAEAALSAMDGKELLGRPVRLKFSLKNVNXXXXXXXXXDNAKGQPEEASNAI 856
F+SFAT+EEAE A++ ++GKE++GRP+ LKFSL++ + ++ G EA+NA
Sbjct: 240 FVSFATREEAENAITKLNGKEIMGRPITLKFSLRSAS---------ESEDGDSVEANNAS 290
Query: 857 E 859
E
Sbjct: 291 E 291
Score = 34.3 bits (77), Expect(2) = 3e-51
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +3
Query: 231 TVQEISVEETEERILEDNRRKLYIFNLPWSFS 326
T QE EET+ L +RKL++FNLPWS S
Sbjct: 79 TSQEEKTEETQNSNL---KRKLFVFNLPWSMS 107
>ref|XP_002879549.1| hypothetical protein ARALYDRAFT_482506 [Arabidopsis lyrata subsp.
lyrata] gi|297325388|gb|EFH55808.1| hypothetical protein
ARALYDRAFT_482506 [Arabidopsis lyrata subsp. lyrata]
Length = 308
Score = 195 bits (496), Expect(2) = 3e-51
Identities = 101/185 (54%), Positives = 134/185 (72%), Gaps = 4/185 (2%)
Frame = +2
Query: 329 TVKDVEIIKQKNGRSRGFAFITMSSGDEARAVIEKFDSYELSGRIIKVEFAKRMKKXXXX 508
TV +VEII+QK+G++RGFAF+TM+SG+EA+A I+KFD+ ++SGRII V FA+R KK
Sbjct: 120 TVNNVEIIRQKDGKNRGFAFVTMASGEEAQAAIDKFDTSQVSGRIISVNFARRFKKPTPK 179
Query: 509 XXXXXXXV---ETRHKLYVSNLAWKARSSHLREFFSSS-FNPVSARVVFDSPSGRSAGYG 676
+TRHKLYVSNLAWKARS+HLRE F++S FNPVSARVVF P GRS+GYG
Sbjct: 180 PPNDLPSPPPGDTRHKLYVSNLAWKARSTHLRELFTASDFNPVSARVVFADPEGRSSGYG 239
Query: 677 FLSFATKEEAEAALSAMDGKELLGRPVRLKFSLKNVNXXXXXXXXXDNAKGQPEEASNAI 856
F+SFAT+EEAE A++ +DGKE++GRP+ LKFSL++ + DN + +
Sbjct: 240 FVSFATREEAEDAIAKLDGKEIMGRPIILKFSLRSASESEDGDTVGDNNTSEDGDTVEDK 299
Query: 857 EKTEE 871
+EE
Sbjct: 300 NTSEE 304
Score = 35.0 bits (79), Expect(2) = 3e-51
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 228 STVQEISVEETEERILEDN-RRKLYIFNLPWSFS 326
S +E S EE E + N +RKL++FNLPWS S
Sbjct: 74 SAEEETSQEEKTEETQKSNLKRKLFVFNLPWSMS 107