BLASTX nr result
ID: Akebia22_contig00005566
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia22_contig00005566
(1138 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265961.1| PREDICTED: pentatricopeptide repeat-containi... 141 3e-48
ref|XP_006429524.1| hypothetical protein CICLE_v10013613mg [Citr... 127 7e-44
ref|XP_002309173.2| pentatricopeptide repeat-containing family p... 135 5e-43
ref|XP_004305097.1| PREDICTED: pentatricopeptide repeat-containi... 135 4e-42
ref|XP_003533674.1| PREDICTED: pentatricopeptide repeat-containi... 125 5e-42
ref|XP_007138368.1| hypothetical protein PHAVU_009G202600g [Phas... 131 8e-41
gb|EXB42398.1| hypothetical protein L484_021993 [Morus notabilis] 124 8e-41
ref|XP_007140168.1| hypothetical protein PHAVU_008G089500g [Phas... 127 1e-39
ref|XP_003623530.1| Pentatricopeptide repeat-containing protein ... 115 1e-37
ref|XP_004137893.1| PREDICTED: pentatricopeptide repeat-containi... 126 8e-37
ref|XP_007026524.1| Pentatricopeptide repeat superfamily protein... 120 1e-35
ref|XP_004246310.1| PREDICTED: pentatricopeptide repeat-containi... 115 4e-33
gb|AHB18409.1| pentatricopeptide repeat-containing protein [Goss... 95 3e-30
ref|XP_006294146.1| hypothetical protein CARUB_v10023139mg [Caps... 111 1e-28
ref|XP_002879744.1| pentatricopeptide repeat-containing protein ... 107 3e-28
ref|XP_006411054.1| hypothetical protein EUTSA_v10017948mg [Eutr... 105 6e-27
ref|NP_181376.3| pentatricopeptide repeat-containing protein [Ar... 106 6e-27
gb|AAM98219.1| unknown protein [Arabidopsis thaliana] gi|3137637... 106 6e-27
emb|CAN63706.1| hypothetical protein VITISV_013107 [Vitis vinifera] 108 3e-21
ref|XP_006854116.1| hypothetical protein AMTR_s00048p00149840 [A... 59 6e-16
>ref|XP_002265961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Vitis vinifera]
Length = 505
Score = 141 bits (356), Expect(3) = 3e-48
Identities = 68/136 (50%), Positives = 87/136 (63%)
Frame = +1
Query: 478 RKKWPLLPYKGKWQQTFNQQLAMEALQKAATSXXXXXXXXXXXXXSSKERHLLSVLINSF 657
R+KWPL PYK W +TF+ + AM+ L+ + S LS+LI+SF
Sbjct: 16 RRKWPLSPYKATWHETFHHRQAMQTLKNTIANQSPSPQ-------SPSNSQFLSILIDSF 68
Query: 658 SIYACDPTPSAYSFIIKILTQNSQFQQLPPILDRLEKIEKFNPPEHIFVNLIRIYGFANK 837
IY DPTP+AY F+I LT+ QF LPP+L RLEK+EKF PE IF NLI++YG AN
Sbjct: 69 RIYNSDPTPNAYRFVISTLTRCRQFHHLPPLLHRLEKVEKFETPEFIFTNLIKVYGNANM 128
Query: 838 I*DAIEIFFRIPNFRC 885
DA+++FFRIPNFRC
Sbjct: 129 FEDAVDLFFRIPNFRC 144
Score = 70.9 bits (172), Expect(3) = 3e-48
Identities = 40/68 (58%), Positives = 50/68 (73%)
Frame = +2
Query: 935 KECLQMVHQVLLKSHEAMNIRLEEAGFRILITVLCKINKFSYAIEILNLMPHYGYDPDSK 1114
+E L MV Q+LLKS +AMNIRLEE+ FRIL+ LC+I K +YAI ILN M + GY D+K
Sbjct: 162 REGLVMVPQILLKS-QAMNIRLEESSFRILVAALCRIKKHNYAIRILNYMLNDGYAVDAK 220
Query: 1115 *YSLILLS 1138
S+IL S
Sbjct: 221 MCSIILSS 228
Score = 28.5 bits (62), Expect(3) = 3e-48
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 870 PQLQVYPSVSSLHAILSVLCKKK 938
P + PSV SL+A+L VLCK++
Sbjct: 140 PNFRCVPSVYSLNALLYVLCKRR 162
>ref|XP_006429524.1| hypothetical protein CICLE_v10013613mg [Citrus clementina]
gi|557531581|gb|ESR42764.1| hypothetical protein
CICLE_v10013613mg [Citrus clementina]
Length = 506
Score = 127 bits (320), Expect(3) = 7e-44
Identities = 59/135 (43%), Positives = 87/135 (64%)
Frame = +1
Query: 481 KKWPLLPYKGKWQQTFNQQLAMEALQKAATSXXXXXXXXXXXXXSSKERHLLSVLINSFS 660
+KWPL PYK KW QT +QQ A + ++++ T+ K+ H+LS L++SFS
Sbjct: 18 RKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIP-----KQPHILSSLLHSFS 72
Query: 661 IYACDPTPSAYSFIIKILTQNSQFQQLPPILDRLEKIEKFNPPEHIFVNLIRIYGFANKI 840
IY C+P P AY F+IK L +NSQF + +LD +EK E F PE IF++LI+ Y A++
Sbjct: 73 IYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRF 132
Query: 841 *DAIEIFFRIPNFRC 885
D++ +F++IP FRC
Sbjct: 133 QDSVNLFYKIPKFRC 147
Score = 67.8 bits (164), Expect(3) = 7e-44
Identities = 38/68 (55%), Positives = 50/68 (73%)
Frame = +2
Query: 935 KECLQMVHQVLLKSHEAMNIRLEEAGFRILITVLCKINKFSYAIEILNLMPHYGYDPDSK 1114
KE ++MV Q+LLKS + MNIR+EE+ FRILI+ LC+IN+ +AIEILN M + G+ D K
Sbjct: 165 KEWVKMVPQILLKS-QLMNIRIEESSFRILISTLCRINRVGFAIEILNCMINDGFCVDGK 223
Query: 1115 *YSLILLS 1138
S IL S
Sbjct: 224 TCSWILSS 231
Score = 30.8 bits (68), Expect(3) = 7e-44
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 870 PQLQVYPSVSSLHAILSVLCKKKNVFK 950
P+ + PSV SL+A+LSVLC+ K K
Sbjct: 143 PKFRCVPSVYSLNALLSVLCRNKEWVK 169
>ref|XP_002309173.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550335936|gb|EEE92696.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 490
Score = 135 bits (339), Expect(3) = 5e-43
Identities = 65/135 (48%), Positives = 85/135 (62%)
Frame = +1
Query: 481 KKWPLLPYKGKWQQTFNQQLAMEALQKAATSXXXXXXXXXXXXXSSKERHLLSVLINSFS 660
+KWP PYK +W + FNQQ AM++L+++A S + HLLS LI+SFS
Sbjct: 18 RKWPYSPYKARWHRIFNQQQAMQSLKQSALKPPQQE--------SPNKPHLLSSLIHSFS 69
Query: 661 IYACDPTPSAYSFIIKILTQNSQFQQLPPILDRLEKIEKFNPPEHIFVNLIRIYGFANKI 840
IY +P P A+ FI K L + SQF +P +LD LEK+E F PPE F LI +YG NK
Sbjct: 70 IYDVEPAPKAFDFIFKTLVKTSQFHHIPSVLDHLEKVESFEPPESTFAYLIEVYGRTNKT 129
Query: 841 *DAIEIFFRIPNFRC 885
+AIE+F+RIP FRC
Sbjct: 130 HEAIELFYRIPKFRC 144
Score = 61.6 bits (148), Expect(3) = 5e-43
Identities = 31/63 (49%), Positives = 49/63 (77%)
Frame = +2
Query: 944 LQMVHQVLLKSHEAMNIRLEEAGFRILITVLCKINKFSYAIEILNLMPHYGYDPDSK*YS 1123
L++V ++LLKS + MNIR+EE+ F++LIT LC+I K +AIE+LN M + G+ +++ YS
Sbjct: 165 LKLVPEILLKS-QVMNIRVEESTFQVLITALCRIRKVGFAIEMLNCMVNDGFIVNAEIYS 223
Query: 1124 LIL 1132
L+L
Sbjct: 224 LLL 226
Score = 26.9 bits (58), Expect(3) = 5e-43
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 870 PQLQVYPSVSSLHAILSVLCKKKNVFK 950
P+ + PSV SL+ ++SVLC+ K
Sbjct: 140 PKFRCVPSVYSLNTLISVLCRNSKGLK 166
>ref|XP_004305097.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 491
Score = 135 bits (339), Expect(2) = 4e-42
Identities = 64/135 (47%), Positives = 87/135 (64%)
Frame = +1
Query: 481 KKWPLLPYKGKWQQTFNQQLAMEALQKAATSXXXXXXXXXXXXXSSKERHLLSVLINSFS 660
+KWP+ PY KW + FNQ A++ L+ + + + LLS LI+SF+
Sbjct: 19 RKWPVSPYNTKWHKLFNQHQALQTLKHSPLNPP---------------QTLLSTLIHSFN 63
Query: 661 IYACDPTPSAYSFIIKILTQNSQFQQLPPILDRLEKIEKFNPPEHIFVNLIRIYGFANKI 840
+ CDPTP AY+F++K L + SQ +P +LDRLE IEKF+PPE IF NLIR YG AN++
Sbjct: 64 TFNCDPTPEAYNFVLKTLFKTSQLSHIPSVLDRLESIEKFHPPESIFANLIRFYGSANRV 123
Query: 841 *DAIEIFFRIPNFRC 885
DAI++F RIP FRC
Sbjct: 124 EDAIDVFCRIPKFRC 138
Score = 64.7 bits (156), Expect(2) = 4e-42
Identities = 38/67 (56%), Positives = 45/67 (67%)
Frame = +2
Query: 938 ECLQMVHQVLLKSHEAMNIRLEEAGFRILITVLCKINKFSYAIEILNLMPHYGYDPDSK* 1117
E L+MV QVL+ S AM IRLEE+ FRILI+ LC+I YAIEI+ M GYD D K
Sbjct: 157 EGLKMVPQVLMNSR-AMGIRLEESSFRILISALCRIGSVGYAIEIMKCMISNGYDLDVKI 215
Query: 1118 YSLILLS 1138
SL+L S
Sbjct: 216 CSLVLSS 222
>ref|XP_003533674.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Glycine max]
Length = 499
Score = 125 bits (314), Expect(3) = 5e-42
Identities = 61/136 (44%), Positives = 81/136 (59%)
Frame = +1
Query: 481 KKWPLLPYKGKWQQTFNQQLAMEALQKAATSXXXXXXXXXXXXXSSKERHLLSVLINSFS 660
KKWP PYK W F ++ AM+ L++A LLS L++SF
Sbjct: 18 KKWPHSPYKTSWHHNFGEEQAMKNLKQATLEMDSSQHPQRPNLPCP---FLLSTLLDSFK 74
Query: 661 IYACDPTPSAYSFIIKILTQNSQFQQLPPILDRLEKIEKFNPPEHIFVNLIRIYGFANKI 840
Y+ DPTP AY F++K LT SQ Q +PP+L LE +EKF PE I V LIR YG ++++
Sbjct: 75 AYSIDPTPKAYFFVLKTLTSTSQLQDIPPVLYHLEHLEKFETPESILVYLIRFYGLSDRV 134
Query: 841 *DAIEIFFRIPNFRCT 888
DA+++FFRIP FRCT
Sbjct: 135 QDAVDLFFRIPRFRCT 150
Score = 67.0 bits (162), Expect(3) = 5e-42
Identities = 33/67 (49%), Positives = 48/67 (71%)
Frame = +2
Query: 932 EKECLQMVHQVLLKSHEAMNIRLEEAGFRILITVLCKINKFSYAIEILNLMPHYGYDPDS 1111
+++CL+MV ++LLKS MNIR+EE+ FR+LI LC+I + YAI++LN M GY D
Sbjct: 166 KRDCLEMVPEILLKSQH-MNIRVEESTFRVLIRALCRIKRVGYAIKMLNFMVEDGYGLDE 224
Query: 1112 K*YSLIL 1132
K SL++
Sbjct: 225 KICSLVI 231
Score = 27.7 bits (60), Expect(3) = 5e-42
Identities = 10/24 (41%), Positives = 19/24 (79%)
Frame = +3
Query: 870 PQLQVYPSVSSLHAILSVLCKKKN 941
P+ + P+V SL+ +LS+LC+K++
Sbjct: 145 PRFRCTPTVCSLNLVLSLLCRKRD 168
>ref|XP_007138368.1| hypothetical protein PHAVU_009G202600g [Phaseolus vulgaris]
gi|561011455|gb|ESW10362.1| hypothetical protein
PHAVU_009G202600g [Phaseolus vulgaris]
Length = 513
Score = 131 bits (329), Expect(2) = 8e-41
Identities = 65/136 (47%), Positives = 82/136 (60%)
Frame = +1
Query: 481 KKWPLLPYKGKWQQTFNQQLAMEALQKAATSXXXXXXXXXXXXXSSKERHLLSVLINSFS 660
+KWP PYK W F +Q AM L++A + LLS LI+SF
Sbjct: 18 RKWPHSPYKTSWHHNFGEQQAMHKLKQATLEMGCPQTP------NLPHPFLLSTLIDSFK 71
Query: 661 IYACDPTPSAYSFIIKILTQNSQFQQLPPILDRLEKIEKFNPPEHIFVNLIRIYGFANKI 840
Y+CDPTP AY F+IK LT SQFQ +PP+LD LE +EKF PE V LIR YG ++K+
Sbjct: 72 SYSCDPTPKAYYFLIKTLTCTSQFQDIPPVLDHLEHLEKFETPEFNLVYLIRFYGLSDKV 131
Query: 841 *DAIEIFFRIPNFRCT 888
DA+++F RIP FRCT
Sbjct: 132 QDAVDLFLRIPRFRCT 147
Score = 64.3 bits (155), Expect(2) = 8e-41
Identities = 34/69 (49%), Positives = 48/69 (69%)
Frame = +2
Query: 932 EKECLQMVHQVLLKSHEAMNIRLEEAGFRILITVLCKINKFSYAIEILNLMPHYGYDPDS 1111
++ECL+MV ++LLKS MNIR+EE+ F++LI LC+I + YAI++LN M GY D
Sbjct: 163 KRECLKMVPEILLKSQH-MNIRVEESTFQVLIKALCRIKRVGYAIKMLNYMIEGGYGLDE 221
Query: 1112 K*YSLILLS 1138
SLI+ S
Sbjct: 222 TMCSLIISS 230
>gb|EXB42398.1| hypothetical protein L484_021993 [Morus notabilis]
Length = 494
Score = 124 bits (311), Expect(2) = 8e-41
Identities = 58/135 (42%), Positives = 85/135 (62%)
Frame = +1
Query: 481 KKWPLLPYKGKWQQTFNQQLAMEALQKAATSXXXXXXXXXXXXXSSKERHLLSVLINSFS 660
+++P+ PYK KW +TFNQ A++ L++ + LLS+L+NSF+
Sbjct: 17 REFPISPYKTKWHETFNQTQALQTLKR---------------HQNENPNRLLSLLLNSFN 61
Query: 661 IYACDPTPSAYSFIIKILTQNSQFQQLPPILDRLEKIEKFNPPEHIFVNLIRIYGFANKI 840
Y C+PTP AY F++K L + SQF + +LDR+E +EKF PE+ F +I YGF ++I
Sbjct: 62 SYDCNPTPEAYHFVLKTLIKTSQFDHIHSVLDRIEFVEKFETPEYFFAQIIGFYGFLDRI 121
Query: 841 *DAIEIFFRIPNFRC 885
DAI+IF+RIP FRC
Sbjct: 122 EDAIDIFWRIPKFRC 136
Score = 71.2 bits (173), Expect(2) = 8e-41
Identities = 41/65 (63%), Positives = 48/65 (73%)
Frame = +2
Query: 938 ECLQMVHQVLLKSHEAMNIRLEEAGFRILITVLCKINKFSYAIEILNLMPHYGYDPDSK* 1117
E L+ V +VL+KS + MNIRLEEA FRILIT LCKI K YAIEIL+ M GYD D++
Sbjct: 155 EGLRFVPEVLIKSRD-MNIRLEEASFRILITALCKIGKVGYAIEILDCMISDGYDIDARI 213
Query: 1118 YSLIL 1132
SLIL
Sbjct: 214 CSLIL 218
>ref|XP_007140168.1| hypothetical protein PHAVU_008G089500g [Phaseolus vulgaris]
gi|561013301|gb|ESW12162.1| hypothetical protein
PHAVU_008G089500g [Phaseolus vulgaris]
Length = 514
Score = 127 bits (318), Expect(2) = 1e-39
Identities = 60/136 (44%), Positives = 81/136 (59%)
Frame = +1
Query: 481 KKWPLLPYKGKWQQTFNQQLAMEALQKAATSXXXXXXXXXXXXXSSKERHLLSVLINSFS 660
+KWP PYK W F +Q AM L++A + LLS L+++F
Sbjct: 18 RKWPHSPYKTSWHHNFGEQQAMHKLKQATLEMGCPQTP------NLPHPFLLSTLLDAFK 71
Query: 661 IYACDPTPSAYSFIIKILTQNSQFQQLPPILDRLEKIEKFNPPEHIFVNLIRIYGFANKI 840
Y+CDPTP AY F+IK LT S Q +PP+LD LE++E F PE I V LIR YG ++++
Sbjct: 72 AYSCDPTPKAYYFVIKTLTSTSHLQDIPPVLDHLEQLETFETPEFILVYLIRFYGLSDRV 131
Query: 841 *DAIEIFFRIPNFRCT 888
DA+++F RIP FRCT
Sbjct: 132 QDAVDLFLRIPRFRCT 147
Score = 64.3 bits (155), Expect(2) = 1e-39
Identities = 34/69 (49%), Positives = 48/69 (69%)
Frame = +2
Query: 932 EKECLQMVHQVLLKSHEAMNIRLEEAGFRILITVLCKINKFSYAIEILNLMPHYGYDPDS 1111
++ECL+MV ++LLKS MNIR+EE+ F++LI LC+I + YAI++LN M GY D
Sbjct: 163 KRECLKMVPEILLKSQH-MNIRVEESTFQVLIEALCRIKRVGYAIKMLNYMIEGGYGLDE 221
Query: 1112 K*YSLILLS 1138
SLI+ S
Sbjct: 222 TICSLIISS 230
>ref|XP_003623530.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498545|gb|AES79748.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 653
Score = 115 bits (289), Expect(3) = 1e-37
Identities = 60/138 (43%), Positives = 81/138 (58%), Gaps = 2/138 (1%)
Frame = +1
Query: 481 KKWPLLPYKGKWQQTFNQQLAMEALQKAATSXXXXXXXXXXXXXSSKERHLLSVLINSFS 660
+KWP PYK W F +Q A++ L A T ++ + LLS LI+SF
Sbjct: 18 RKWPHSPYKTSWHHNFGEQQAIQILINAKTQTQ-----------NNNDPFLLSTLIHSFK 66
Query: 661 IYACDPTPSAYSFIIKILTQ--NSQFQQLPPILDRLEKIEKFNPPEHIFVNLIRIYGFAN 834
Y DP+P AY F+IK +T S ++P IL+ LE EKF PE IF+ LIR YGF +
Sbjct: 67 AYHTDPSPKAYFFLIKTITNINTSHLHEIPHILNHLEHNEKFETPEFIFMYLIRFYGFND 126
Query: 835 KI*DAIEIFFRIPNFRCT 888
++ DA+++FFRIP FRCT
Sbjct: 127 RVQDAVDLFFRIPRFRCT 144
Score = 63.5 bits (153), Expect(3) = 1e-37
Identities = 34/69 (49%), Positives = 47/69 (68%)
Frame = +2
Query: 932 EKECLQMVHQVLLKSHEAMNIRLEEAGFRILITVLCKINKFSYAIEILNLMPHYGYDPDS 1111
++ECL+MV +LLKS + M IRLEE+ F +LI LC+I + YAI+++N M GY D
Sbjct: 160 KRECLRMVPDILLKSRD-MKIRLEESSFWVLIKALCRIKRVDYAIKMMNCMVEDGYCLDD 218
Query: 1112 K*YSLILLS 1138
K SLI+ S
Sbjct: 219 KICSLIISS 227
Score = 25.8 bits (55), Expect(3) = 1e-37
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 870 PQLQVYPSVSSLHAILSVLCKKKNVFK 950
P+ + P+V SL+ +LS+LC K+ +
Sbjct: 139 PRFRCTPTVCSLNLLLSLLCGKRECLR 165
>ref|XP_004137893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Cucumis sativus]
gi|449483740|ref|XP_004156675.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Cucumis sativus]
Length = 491
Score = 126 bits (317), Expect(2) = 8e-37
Identities = 64/143 (44%), Positives = 89/143 (62%)
Frame = +1
Query: 481 KKWPLLPYKGKWQQTFNQQLAMEALQKAATSXXXXXXXXXXXXXSSKERHLLSVLINSFS 660
+KWPL +K KW QTF+Q A+ L++AA + LLS L+ SF+
Sbjct: 19 RKWPLSSHKTKWHQTFDQDEALRILKQAANP--------------DQPHLLLSALVTSFT 64
Query: 661 IYACDPTPSAYSFIIKILTQNSQFQQLPPILDRLEKIEKFNPPEHIFVNLIRIYGFANKI 840
Y+C PTP+AY F++K L + SQF +PP+L RL+ +E F PE+IFV+LI++YG N+I
Sbjct: 65 AYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLIKLYGRMNRI 124
Query: 841 *DAIEIFFRIPNFRCTLLCPPST 909
DA+ +F RIP FRC PST
Sbjct: 125 QDAVTLFRRIPMFRCV----PST 143
Score = 55.5 bits (132), Expect(2) = 8e-37
Identities = 30/65 (46%), Positives = 43/65 (66%)
Frame = +2
Query: 944 LQMVHQVLLKSHEAMNIRLEEAGFRILITVLCKINKFSYAIEILNLMPHYGYDPDSK*YS 1123
L ++ ++L SH +M IRLE + F+ILIT LCK+NK +A+E+ N M GY + + S
Sbjct: 160 LPIIPDIILNSH-SMGIRLEHSTFQILITALCKVNKVGHAMELFNYMITEGYGLNPQICS 218
Query: 1124 LILLS 1138
LIL S
Sbjct: 219 LILAS 223
>ref|XP_007026524.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao] gi|508715129|gb|EOY07026.1| Pentatricopeptide
repeat superfamily protein, putative [Theobroma cacao]
Length = 542
Score = 120 bits (301), Expect(2) = 1e-35
Identities = 60/135 (44%), Positives = 78/135 (57%)
Frame = +1
Query: 481 KKWPLLPYKGKWQQTFNQQLAMEALQKAATSXXXXXXXXXXXXXSSKERHLLSVLINSFS 660
++WP YK KW QTF Q+ AM + ++ LLS L+ SFS
Sbjct: 61 RRWPHFAYKTKWNQTFTQKQAMLSFKQLVAVAQDNLPPPI----------LLSTLVRSFS 110
Query: 661 IYACDPTPSAYSFIIKILTQNSQFQQLPPILDRLEKIEKFNPPEHIFVNLIRIYGFANKI 840
+Y PTP AY F+IK L QN F +P +L LE +EKF PE+IF +LI YG AN+I
Sbjct: 111 LYNVHPTPQAYHFLIKTLIQNLHFNHIPSVLHHLEHVEKFQTPEYIFADLITTYGIANRI 170
Query: 841 *DAIEIFFRIPNFRC 885
DA++IF+RIP FRC
Sbjct: 171 QDAVDIFYRIPKFRC 185
Score = 57.4 bits (137), Expect(2) = 1e-35
Identities = 40/88 (45%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Frame = +2
Query: 890 FCVLPPRNSIRSL*EKEC-----LQMVHQVLLKSHEAMNIRLEEAGFRILITVLCKINKF 1054
F +P S+ SL C L++V QVLLKS MNIR+EE+ RIL++ LC++NK
Sbjct: 183 FRCVPSAYSLNSLLALLCRNQYSLKLVPQVLLKSL-LMNIRVEESTLRILVSALCRMNKV 241
Query: 1055 SYAIEILNLMPHYGYDPDSK*YSLILLS 1138
SYAI+IL M G + K S IL S
Sbjct: 242 SYAIDILQRMIDEGLGVNDKVCSFILSS 269
>ref|XP_004246310.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Solanum lycopersicum]
Length = 496
Score = 115 bits (287), Expect(3) = 4e-33
Identities = 62/138 (44%), Positives = 85/138 (61%), Gaps = 2/138 (1%)
Frame = +1
Query: 478 RKKWPLLPYKGKWQQT-FNQQLAMEALQKAATSXXXXXXXXXXXXXSSKERHLLSVLINS 654
R+KWPL YK KWQ+ QL+M+ L ++ + S + HLLS+L++S
Sbjct: 35 RRKWPLSLYKTKWQEEKLTHQLSMQKLVESTPNR-------------SPKTHLLSILLDS 81
Query: 655 FSIYACDPTPSAYSFIIKILTQN-SQFQQLPPILDRLEKIEKFNPPEHIFVNLIRIYGFA 831
FS Y CDPTP+AY FI+K LTQN S + ++P ILD + K E F PE+IF LI+ YG +
Sbjct: 82 FSAYECDPTPNAYYFILKTLTQNPSTWDEIPLILDYIRKFENFETPEYIFTYLIKFYGDS 141
Query: 832 NKI*DAIEIFFRIPNFRC 885
N A E+FF +P +RC
Sbjct: 142 NMTHLAYEMFFTMPAYRC 159
Score = 51.2 bits (121), Expect(3) = 4e-33
Identities = 29/63 (46%), Positives = 45/63 (71%)
Frame = +2
Query: 944 LQMVHQVLLKSHEAMNIRLEEAGFRILITVLCKINKFSYAIEILNLMPHYGYDPDSK*YS 1123
L++V QVL+KS + +NI +EE+ F+ILI LC+I K + A+++L LM G++ D+ S
Sbjct: 180 LRIVLQVLVKS-QLLNIWVEESTFKILIRALCRIGKTNNAVDLLKLMVDSGFNLDANICS 238
Query: 1124 LIL 1132
LIL
Sbjct: 239 LIL 241
Score = 23.9 bits (50), Expect(3) = 4e-33
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 870 PQLQVYPSVSSLHAILSVLCK 932
P + PSV SL+ ++ VLCK
Sbjct: 155 PAYRCNPSVKSLNCLIWVLCK 175
>gb|AHB18409.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
Length = 480
Score = 94.7 bits (234), Expect(3) = 3e-30
Identities = 49/136 (36%), Positives = 76/136 (55%), Gaps = 1/136 (0%)
Frame = +1
Query: 481 KKWPLLP-YKGKWQQTFNQQLAMEALQKAATSXXXXXXXXXXXXXSSKERHLLSVLINSF 657
+KWPL+ +K KW+Q F Q M + ++ + + + L+ S
Sbjct: 14 RKWPLISSHKTKWRQAFTQNQPMVSFKQLVARH------------NPLQPDFVPSLLQSL 61
Query: 658 SIYACDPTPSAYSFIIKILTQNSQFQQLPPILDRLEKIEKFNPPEHIFVNLIRIYGFANK 837
S+Y +P AY F+IK L N QF +P +L L+ ++ F PE+IF +L++ YG AN+
Sbjct: 62 SLYNLHQSPQAYHFLIKTLLHNRQFHHIPSLLHHLQ-LQHFQTPEYIFTHLVKFYGKANR 120
Query: 838 I*DAIEIFFRIPNFRC 885
I DA++IF+RIP FRC
Sbjct: 121 IQDAVDIFYRIPQFRC 136
Score = 56.6 bits (135), Expect(3) = 3e-30
Identities = 32/65 (49%), Positives = 44/65 (67%)
Frame = +2
Query: 944 LQMVHQVLLKSHEAMNIRLEEAGFRILITVLCKINKFSYAIEILNLMPHYGYDPDSK*YS 1123
L+++ QVLL S MNIRLEE+ FR+L+ LC++NK +YAIEIL M G + K +S
Sbjct: 157 LKLLPQVLLNSLH-MNIRLEESTFRLLVCTLCRMNKVAYAIEILQRMLDDGLGVNDKVFS 215
Query: 1124 LILLS 1138
+L S
Sbjct: 216 FVLSS 220
Score = 28.9 bits (63), Expect(3) = 3e-30
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 870 PQLQVYPSVSSLHAILSVLCKKKNVFK 950
PQ + +PS SL+A+L++LC+ + K
Sbjct: 132 PQFRCFPSAYSLNALLALLCRSQRGLK 158
>ref|XP_006294146.1| hypothetical protein CARUB_v10023139mg [Capsella rubella]
gi|482562854|gb|EOA27044.1| hypothetical protein
CARUB_v10023139mg [Capsella rubella]
Length = 470
Score = 111 bits (277), Expect(2) = 1e-28
Identities = 58/155 (37%), Positives = 87/155 (56%)
Frame = +1
Query: 481 KKWPLLPYKGKWQQTFNQQLAMEALQKAATSXXXXXXXXXXXXXSSKERHLLSVLINSFS 660
+K P P+K KW + Q+ AME L+ + + S++ ++ L++SF
Sbjct: 35 RKIPHSPFKTKWNENLKQKYAMEELRSSPVA-------------DSEDGGVIRTLVSSFR 81
Query: 661 IYACDPTPSAYSFIIKILTQNSQFQQLPPILDRLEKIEKFNPPEHIFVNLIRIYGFANKI 840
++ C+PTP AY F+IK L + SQ + + +L LE EKF+ PE IF ++I YGFA +I
Sbjct: 82 LHNCEPTPQAYRFVIKTLAKTSQLENIASVLSHLEVSEKFDTPESIFRDVIAAYGFAGRI 141
Query: 841 *DAIEIFFRIPNFRCTLLCPPSTQFYPFSVRKRMS 945
+AI++FF+IPNFRC VRKR S
Sbjct: 142 GEAIDVFFKIPNFRCVPSAYTLNALLLVLVRKRES 176
Score = 43.1 bits (100), Expect(2) = 1e-28
Identities = 26/69 (37%), Positives = 41/69 (59%)
Frame = +2
Query: 932 EKECLQMVHQVLLKSHEAMNIRLEEAGFRILITVLCKINKFSYAIEILNLMPHYGYDPDS 1111
++E L++V ++L+K+ M +RLEE+ F ILI LCKI + A E++ M D
Sbjct: 173 KRESLELVPEILVKASR-MGVRLEESTFGILIDALCKIGEVDCATELVRYMSIDCVIVDP 231
Query: 1112 K*YSLILLS 1138
+ YS +L S
Sbjct: 232 RLYSQLLSS 240
>ref|XP_002879744.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297325583|gb|EFH56003.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 444
Score = 107 bits (267), Expect(2) = 3e-28
Identities = 56/155 (36%), Positives = 85/155 (54%)
Frame = +1
Query: 481 KKWPLLPYKGKWQQTFNQQLAMEALQKAATSXXXXXXXXXXXXXSSKERHLLSVLINSFS 660
+K P +K KW + Q+ AME L+ + S+ ++ L++SF
Sbjct: 9 RKIPQSSFKTKWNENLKQKYAMEELRSNLLA-------------DSENGSVMRTLVSSFQ 55
Query: 661 IYACDPTPSAYSFIIKILTQNSQFQQLPPILDRLEKIEKFNPPEHIFVNLIRIYGFANKI 840
++ C+PTP AY F+I+ L + SQ + + +LD LE EKF+ PE IF ++I YGF+ +I
Sbjct: 56 LHNCEPTPQAYRFVIETLAKTSQLENIASVLDHLEVSEKFDTPESIFRDVIAAYGFSGRI 115
Query: 841 *DAIEIFFRIPNFRCTLLCPPSTQFYPFSVRKRMS 945
+AI++FF+IPNFRC VRKR S
Sbjct: 116 EEAIDVFFKIPNFRCVPSAYTLNALLLVLVRKRQS 150
Score = 45.8 bits (107), Expect(2) = 3e-28
Identities = 25/69 (36%), Positives = 42/69 (60%)
Frame = +2
Query: 932 EKECLQMVHQVLLKSHEAMNIRLEEAGFRILITVLCKINKFSYAIEILNLMPHYGYDPDS 1111
+++ L++V ++L+K+ M +RLEE+ F ILI LC+I + A E++ M D
Sbjct: 147 KRQSLELVPEILVKASR-MGVRLEESTFGILINALCRIGEVDCATELVRYMSEDSVIVDP 205
Query: 1112 K*YSLILLS 1138
+ YSL+L S
Sbjct: 206 RLYSLLLSS 214
>ref|XP_006411054.1| hypothetical protein EUTSA_v10017948mg [Eutrema salsugineum]
gi|557112223|gb|ESQ52507.1| hypothetical protein
EUTSA_v10017948mg [Eutrema salsugineum]
Length = 456
Score = 105 bits (263), Expect(2) = 6e-27
Identities = 56/153 (36%), Positives = 85/153 (55%)
Frame = +1
Query: 481 KKWPLLPYKGKWQQTFNQQLAMEALQKAATSXXXXXXXXXXXXXSSKERHLLSVLINSFS 660
+K P +K KW + Q+ AME L+ + S++ +L LI+SF
Sbjct: 18 RKIPHSSFKTKWNENLKQKYAMEELRSGLIADSG----------SNENDGVLRTLISSFR 67
Query: 661 IYACDPTPSAYSFIIKILTQNSQFQQLPPILDRLEKIEKFNPPEHIFVNLIRIYGFANKI 840
++ C+PTP AY F+IK L + SQ + + +L+ +E EKF+ PE IF ++I YGF+ +I
Sbjct: 68 LHNCEPTPQAYKFVIKTLAKTSQLENIASVLNHIEISEKFDTPESIFRDVIFAYGFSGRI 127
Query: 841 *DAIEIFFRIPNFRCTLLCPPSTQFYPFSVRKR 939
+AI++FF+IPNFRC VRKR
Sbjct: 128 EEAIDVFFKIPNFRCVPSAYTLNALLSVLVRKR 160
Score = 43.1 bits (100), Expect(2) = 6e-27
Identities = 26/69 (37%), Positives = 43/69 (62%)
Frame = +2
Query: 932 EKECLQMVHQVLLKSHEAMNIRLEEAGFRILITVLCKINKFSYAIEILNLMPHYGYDPDS 1111
+++ L+MV +VLLK+ + + +RLEE+ ILI LC+I + A +++ M Y D
Sbjct: 159 KRQGLKMVPEVLLKASK-LGVRLEESTLGILIDALCRIGEVDCATDLVKDMSDDCYIVDP 217
Query: 1112 K*YSLILLS 1138
+ YSL+L S
Sbjct: 218 RLYSLLLSS 226
>ref|NP_181376.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546769|sp|Q8L6Y7.2|PP193_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g38420, mitochondrial; Flags: Precursor
gi|3395430|gb|AAC28762.1| hypothetical protein
[Arabidopsis thaliana] gi|330254441|gb|AEC09535.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 453
Score = 106 bits (265), Expect(2) = 6e-27
Identities = 57/155 (36%), Positives = 85/155 (54%)
Frame = +1
Query: 481 KKWPLLPYKGKWQQTFNQQLAMEALQKAATSXXXXXXXXXXXXXSSKERHLLSVLINSFS 660
+K P +K KW + Q+ AME L+ + S+ ++ L++SF
Sbjct: 18 RKIPHSSFKTKWNENLKQKYAMEELRSNLLT-------------DSENASVMRTLLSSFQ 64
Query: 661 IYACDPTPSAYSFIIKILTQNSQFQQLPPILDRLEKIEKFNPPEHIFVNLIRIYGFANKI 840
++ C+PTP AY F+IK L ++SQ + + +L LE EKF+ PE IF ++I YGF+ +I
Sbjct: 65 LHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRI 124
Query: 841 *DAIEIFFRIPNFRCTLLCPPSTQFYPFSVRKRMS 945
+AIE+FF+IPNFRC VRKR S
Sbjct: 125 EEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQS 159
Score = 42.4 bits (98), Expect(2) = 6e-27
Identities = 24/69 (34%), Positives = 41/69 (59%)
Frame = +2
Query: 932 EKECLQMVHQVLLKSHEAMNIRLEEAGFRILITVLCKINKFSYAIEILNLMPHYGYDPDS 1111
+++ L++V ++L+K+ M +RLEE+ F ILI LC+I + A E++ M D
Sbjct: 156 KRQSLELVPEILVKACR-MGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDP 214
Query: 1112 K*YSLILLS 1138
+ YS +L S
Sbjct: 215 RLYSRLLSS 223
>gb|AAM98219.1| unknown protein [Arabidopsis thaliana] gi|31376375|gb|AAP49514.1|
At2g38420 [Arabidopsis thaliana]
Length = 444
Score = 106 bits (265), Expect(2) = 6e-27
Identities = 57/155 (36%), Positives = 85/155 (54%)
Frame = +1
Query: 481 KKWPLLPYKGKWQQTFNQQLAMEALQKAATSXXXXXXXXXXXXXSSKERHLLSVLINSFS 660
+K P +K KW + Q+ AME L+ + S+ ++ L++SF
Sbjct: 9 RKIPHSSFKTKWNENLKQKYAMEELRSNLLT-------------DSENASVMRTLLSSFQ 55
Query: 661 IYACDPTPSAYSFIIKILTQNSQFQQLPPILDRLEKIEKFNPPEHIFVNLIRIYGFANKI 840
++ C+PTP AY F+IK L ++SQ + + +L LE EKF+ PE IF ++I YGF+ +I
Sbjct: 56 LHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRI 115
Query: 841 *DAIEIFFRIPNFRCTLLCPPSTQFYPFSVRKRMS 945
+AIE+FF+IPNFRC VRKR S
Sbjct: 116 EEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQS 150
Score = 42.4 bits (98), Expect(2) = 6e-27
Identities = 24/69 (34%), Positives = 41/69 (59%)
Frame = +2
Query: 932 EKECLQMVHQVLLKSHEAMNIRLEEAGFRILITVLCKINKFSYAIEILNLMPHYGYDPDS 1111
+++ L++V ++L+K+ M +RLEE+ F ILI LC+I + A E++ M D
Sbjct: 147 KRQSLELVPEILVKACR-MGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDP 205
Query: 1112 K*YSLILLS 1138
+ YS +L S
Sbjct: 206 RLYSRLLSS 214
>emb|CAN63706.1| hypothetical protein VITISV_013107 [Vitis vinifera]
Length = 390
Score = 108 bits (271), Expect = 3e-21
Identities = 54/114 (47%), Positives = 69/114 (60%)
Frame = +1
Query: 478 RKKWPLLPYKGKWQQTFNQQLAMEALQKAATSXXXXXXXXXXXXXSSKERHLLSVLINSF 657
R+KWPL PYK W +TF+ + AM+ L+ + S LS+LI+SF
Sbjct: 18 RRKWPLSPYKATWHETFHHRQAMQTLKNTIANQSPSPQ-------SPSNSQFLSILIDSF 70
Query: 658 SIYACDPTPSAYSFIIKILTQNSQFQQLPPILDRLEKIEKFNPPEHIFVNLIRI 819
IY DPTP+AY F+I LT+ QF LPP+L RLEK+EKF PE IF NLI+I
Sbjct: 71 RIYNSDPTPNAYRFVISTLTRCRQFHHLPPLLHRLEKVEKFETPEFIFTNLIKI 124
Score = 64.3 bits (155), Expect = 9e-08
Identities = 35/60 (58%), Positives = 45/60 (75%)
Frame = +2
Query: 959 QVLLKSHEAMNIRLEEAGFRILITVLCKINKFSYAIEILNLMPHYGYDPDSK*YSLILLS 1138
++LLKS +AMNIRLEE+ FRIL+ LC+I K +YAI ILN M + GY D+K S+IL S
Sbjct: 123 KILLKS-QAMNIRLEESSFRILVAALCRIKKHNYAIRILNYMLNDGYAVDAKMCSIILSS 181
>ref|XP_006854116.1| hypothetical protein AMTR_s00048p00149840 [Amborella trichopoda]
gi|548857785|gb|ERN15583.1| hypothetical protein
AMTR_s00048p00149840 [Amborella trichopoda]
Length = 464
Score = 58.5 bits (140), Expect(3) = 6e-16
Identities = 32/67 (47%), Positives = 45/67 (67%)
Frame = +2
Query: 932 EKECLQMVHQVLLKSHEAMNIRLEEAGFRILITVLCKINKFSYAIEILNLMPHYGYDPDS 1111
+ + +V ++L+K+ E MNIRL+ + FRILI LC+I K +AIE+L LMP G PDS
Sbjct: 164 DTDSFHLVPELLIKTLE-MNIRLDASSFRILIGSLCRIGKLGFAIELLRLMPDQGCWPDS 222
Query: 1112 K*YSLIL 1132
Y+ IL
Sbjct: 223 GFYAEIL 229
Score = 44.7 bits (104), Expect(3) = 6e-16
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +1
Query: 703 IKILTQNSQFQQLPPILDRLEKIEKFNPPEHIFVNLIRIYGFANKI*DAIEIFFRIPNFR 882
I IL QN QF L +L L+ KF+ PE + LI+ + + +A+++FF +P+ R
Sbjct: 88 IVILAQNPQFSGLKTLLRCLQSNRKFSTPETRIIGLIQSCASSKMVKEALDLFFAMPHLR 147
Query: 883 C 885
C
Sbjct: 148 C 148
Score = 28.5 bits (62), Expect(3) = 6e-16
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 870 PQLQVYPSVSSLHAILSVLC 929
P L+ PS +SL+A+LSVLC
Sbjct: 144 PHLRCQPSTTSLNALLSVLC 163