BLASTX nr result
ID: Akebia22_contig00004714
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia22_contig00004714
(633 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF,... 140 3e-31
ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citr... 140 3e-31
ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF,... 139 5e-31
ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citr... 139 5e-31
ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF,... 139 9e-31
emb|CBI32760.3| unnamed protein product [Vitis vinifera] 137 2e-30
ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citr... 136 5e-30
ref|XP_007204994.1| hypothetical protein PRUPE_ppa003513mg [Prun... 134 3e-29
ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD ... 132 1e-28
ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protei... 130 2e-28
ref|XP_007027376.1| RNA polymerase sigma factor rpoD, putative [... 121 2e-25
ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [... 120 4e-25
ref|XP_004304450.1| PREDICTED: RNA polymerase sigma factor sigF,... 114 2e-23
gb|EXC16188.1| RNA polymerase sigma factor rpoD [Morus notabilis] 111 2e-22
ref|XP_006410876.1| hypothetical protein EUTSA_v10016472mg [Eutr... 106 7e-21
gb|EYU34473.1| hypothetical protein MIMGU_mgv1a003862mg [Mimulus... 105 9e-21
ref|XP_006410875.1| hypothetical protein EUTSA_v10016472mg [Eutr... 102 9e-20
ref|XP_002881484.1| RNA polymerase sigma-70 factor [Arabidopsis ... 99 8e-19
ref|NP_565856.1| RNA polymerase sigma factor sigF [Arabidopsis t... 99 1e-18
ref|XP_003542550.1| PREDICTED: RNA polymerase sigma factor sigF,... 96 9e-18
>ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X3 [Citrus sinensis]
Length = 561
Score = 140 bits (353), Expect = 3e-31
Identities = 79/172 (45%), Positives = 105/172 (61%), Gaps = 1/172 (0%)
Frame = +3
Query: 120 MEVGRNLLYSSPLFLPKTHFRSSIPSSVPILHEQATLAVTSTPTTSITRHFPTSVLLQEQ 299
ME GRNLL S P F +T + S+ SS + AV S PT+S+ RHFPTSVLLQEQ
Sbjct: 1 MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSAPAVASVPTSSVARHFPTSVLLQEQ 60
Query: 300 RDEFRPLLQI-REDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRXXXXXXXXX 476
RDE+RPLL + +EDKTSQAT D R + F EEK S DQ ++D E +
Sbjct: 61 RDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLVQDLEHQFLHWPDLWN 120
Query: 477 XXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
+GE P +S+T QS+ D ++ V +P D +ALA++A+ AS++AASL
Sbjct: 121 LSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASL 172
>ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
gi|557530789|gb|ESR41972.1| hypothetical protein
CICLE_v10011376mg [Citrus clementina]
Length = 561
Score = 140 bits (353), Expect = 3e-31
Identities = 79/172 (45%), Positives = 105/172 (61%), Gaps = 1/172 (0%)
Frame = +3
Query: 120 MEVGRNLLYSSPLFLPKTHFRSSIPSSVPILHEQATLAVTSTPTTSITRHFPTSVLLQEQ 299
ME GRNLL S P F +T + S+ SS + AV S PT+S+ RHFPTSVLLQEQ
Sbjct: 1 MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSAPAVASVPTSSVARHFPTSVLLQEQ 60
Query: 300 RDEFRPLLQI-REDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRXXXXXXXXX 476
RDE+RPLL + +EDKTSQAT D R + F EEK S DQ ++D E +
Sbjct: 61 RDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLVQDLEHQFLHWPDLWN 120
Query: 477 XXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
+GE P +S+T QS+ D ++ V +P D +ALA++A+ AS++AASL
Sbjct: 121 LSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASL 172
>ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X2 [Citrus sinensis]
Length = 569
Score = 139 bits (351), Expect = 5e-31
Identities = 83/180 (46%), Positives = 110/180 (61%), Gaps = 9/180 (5%)
Frame = +3
Query: 120 MEVGRNLLYSSPLFLPKTHFR--------SSIPSSVPILHEQATLAVTSTPTTSITRHFP 275
ME GRNLL S P F +T + SS SSV + +EQ+ AV S PT+S+ RHFP
Sbjct: 1 MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSVLMHNEQSAPAVASVPTSSVARHFP 60
Query: 276 TSVLLQEQRDEFRPLLQI-REDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRX 452
TSVLLQEQRDE+RPLL + +EDKTSQAT D R + F EEK S DQ ++D E +
Sbjct: 61 TSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLVQDLEHQF 120
Query: 453 XXXXXXXXXXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
+GE P +S+T QS+ D ++ V +P D +ALA++A+ AS++AASL
Sbjct: 121 LHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASL 180
>ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
gi|557530788|gb|ESR41971.1| hypothetical protein
CICLE_v10011376mg [Citrus clementina]
Length = 569
Score = 139 bits (351), Expect = 5e-31
Identities = 83/180 (46%), Positives = 110/180 (61%), Gaps = 9/180 (5%)
Frame = +3
Query: 120 MEVGRNLLYSSPLFLPKTHFR--------SSIPSSVPILHEQATLAVTSTPTTSITRHFP 275
ME GRNLL S P F +T + SS SSV + +EQ+ AV S PT+S+ RHFP
Sbjct: 1 MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSVLMHNEQSAPAVASVPTSSVARHFP 60
Query: 276 TSVLLQEQRDEFRPLLQI-REDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRX 452
TSVLLQEQRDE+RPLL + +EDKTSQAT D R + F EEK S DQ ++D E +
Sbjct: 61 TSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLVQDLEHQF 120
Query: 453 XXXXXXXXXXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
+GE P +S+T QS+ D ++ V +P D +ALA++A+ AS++AASL
Sbjct: 121 LHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASL 180
>ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X1 [Citrus sinensis]
Length = 570
Score = 139 bits (349), Expect = 9e-31
Identities = 82/181 (45%), Positives = 110/181 (60%), Gaps = 10/181 (5%)
Frame = +3
Query: 120 MEVGRNLLYSSPLFLPKTHFRSSIPSSVP--------ILH-EQATLAVTSTPTTSITRHF 272
ME GRNLL S P F +T + S+ SS ++H EQ+ AV S PT+S+ RHF
Sbjct: 1 MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSAVLMHNEQSAPAVASVPTSSVARHF 60
Query: 273 PTSVLLQEQRDEFRPLLQI-REDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERR 449
PTSVLLQEQRDE+RPLL + +EDKTSQAT D R + F EEK S DQ ++D E +
Sbjct: 61 PTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLVQDLEHQ 120
Query: 450 XXXXXXXXXXXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAAS 629
+GE P +S+T QS+ D ++ V +P D +ALA++A+ AS++AAS
Sbjct: 121 FLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAAS 180
Query: 630 L 632
L
Sbjct: 181 L 181
>emb|CBI32760.3| unnamed protein product [Vitis vinifera]
Length = 561
Score = 137 bits (346), Expect = 2e-30
Identities = 85/173 (49%), Positives = 113/173 (65%), Gaps = 2/173 (1%)
Frame = +3
Query: 120 MEVGRNLLYSSPLFLPKTHFRSSIPSSVPILHEQATLAVTSTPTTSITRHFPTSVLLQEQ 299
ME G N+L S+P F P+THFR+S SSV +LH+Q AV S PTT I R FPTSVLLQEQ
Sbjct: 1 MEAGTNILSSTPSFPPRTHFRNS-SSSVLMLHDQVAPAVASIPTT-IARKFPTSVLLQEQ 58
Query: 300 RDEFRPLLQ-IREDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRXXXXXXXXX 476
RDE+RP Q +++++T QATL++RQ + VS +E+ S +QY+ +FER+
Sbjct: 59 RDEYRPFPQALKDERTFQATLEKRQMEIVVS-ADEENSDDHNQYMVNFERQLLLQPGLWY 117
Query: 477 XXXXXXKGEK-PLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
GEK P S +SI D + + +KPCDVLALAK+A+ AS+QA SL
Sbjct: 118 SLPSSQTGEKSPFSSSIMKSITTDIENSMDVKPCDVLALAKKALSASKQAVSL 170
>ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
gi|557530787|gb|ESR41970.1| hypothetical protein
CICLE_v10011376mg [Citrus clementina]
Length = 558
Score = 136 bits (343), Expect = 5e-30
Identities = 78/172 (45%), Positives = 106/172 (61%), Gaps = 1/172 (0%)
Frame = +3
Query: 120 MEVGRNLLYSSPLFLPKTHFRSSIPSSVPILHEQATLAVTSTPTTSITRHFPTSVLLQEQ 299
ME GRNLL S P F +T + S+ SS ++ +V S PT+S+ RHFPTSVLLQEQ
Sbjct: 1 MEAGRNLLSSPPSFPSRTRVKHSLSSSAS---SSSSSSVASVPTSSVARHFPTSVLLQEQ 57
Query: 300 RDEFRPLLQI-REDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRXXXXXXXXX 476
RDE+RPLL + +EDKTSQAT D R + F EEK S DQ ++D E +
Sbjct: 58 RDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLVQDLEHQFLHWPDLWN 117
Query: 477 XXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
+GE P +S+T QS+ D ++ V +P D +ALA++A+ AS++AASL
Sbjct: 118 LSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASL 169
>ref|XP_007204994.1| hypothetical protein PRUPE_ppa003513mg [Prunus persica]
gi|462400636|gb|EMJ06193.1| hypothetical protein
PRUPE_ppa003513mg [Prunus persica]
Length = 568
Score = 134 bits (336), Expect = 3e-29
Identities = 83/178 (46%), Positives = 108/178 (60%), Gaps = 7/178 (3%)
Frame = +3
Query: 120 MEVGRNLLYSSPLFLPKTHFRSSIPSSVP-----ILHEQATLAVTSTPTTSITRHFPTSV 284
ME GR+ L SS F TH R +PSS P +LHEQA AVTS P TS+ RHFPTSV
Sbjct: 1 MEAGRHFLSSSSAFPSTTHLRHPLPSSSPSTSVLMLHEQAVPAVTSVPITSVARHFPTSV 60
Query: 285 LLQEQRDEFRPLLQI-REDKTSQATLDRRQTDNGVSFCEEKKSCQSDQY-LKDFERRXXX 458
LLQEQRDEF+PLL + +EDKTS+A LDR Q + G S E+ D Y L + +
Sbjct: 61 LLQEQRDEFKPLLHVLKEDKTSEAALDRMQIETGASVHEDLDI--DDFYPLVNSSKPQLL 118
Query: 459 XXXXXXXXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
G KP +T +S+ ++K + ++PC+V+ALAK+A+ ASR+AASL
Sbjct: 119 NHDILDVFSSLQTGAKPSTPLTLESLTTASNKHMDVEPCNVVALAKKALSASREAASL 176
>ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
Length = 572
Score = 132 bits (331), Expect = 1e-28
Identities = 84/183 (45%), Positives = 112/183 (61%), Gaps = 12/183 (6%)
Frame = +3
Query: 120 MEVGRNLLYSSPLFLPKTHFRSSIPSS----------VPILHEQATLAVTSTPTTSITRH 269
ME G N+L S+P F P+THFR+S S V +LH+Q AV S PTT I R
Sbjct: 1 MEAGTNILSSTPSFPPRTHFRNSSSSGNAFFFYVVLFVLMLHDQVAPAVASIPTT-IARK 59
Query: 270 FPTSVLLQEQRDEFRPLLQ-IREDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFER 446
FPTSVLLQEQRDE+RP Q +++++T QATL++RQ + VS +E+ S +QY+ +FER
Sbjct: 60 FPTSVLLQEQRDEYRPFPQALKDERTFQATLEKRQMEIVVS-ADEENSDDHNQYMVNFER 118
Query: 447 RXXXXXXXXXXXXXXXKGEK-PLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQA 623
+ GEK P S +SI D + + +KPCDVLALAK+A+ AS+QA
Sbjct: 119 QLLLQPGLWYSLPSSQTGEKSPFSSSIMKSITTDIENSMDVKPCDVLALAKKALSASKQA 178
Query: 624 ASL 632
SL
Sbjct: 179 VSL 181
>ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protein [Populus trichocarpa]
gi|550336129|gb|ERP59223.1| RNA POLYMERASE SIGMA-70
FACTOR family protein [Populus trichocarpa]
Length = 535
Score = 130 bits (328), Expect = 2e-28
Identities = 81/172 (47%), Positives = 104/172 (60%), Gaps = 1/172 (0%)
Frame = +3
Query: 120 MEVGRNLLYSSPLFLPKTHFRSSIPSSVPILHEQATLAVTSTPTTSITRHFPTSVLLQEQ 299
ME GR LL SSP F +TH ++S+ SSV IL EQAT AV+S PTTS +HFPTSVLLQEQ
Sbjct: 1 MEAGRTLLSSSPSFPTRTHLKNSLTSSVLILREQATPAVSSIPTTSTAQHFPTSVLLQEQ 60
Query: 300 RDEFRPLLQI-REDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRXXXXXXXXX 476
RDEFRPL I +ED+ SQATLDRR+T+ G S E K S + DQ +++FE +
Sbjct: 61 RDEFRPLQNIFKEDRASQATLDRRKTEIGTSGHEGKDSDELDQLVENFEYQLHHWPAYWN 120
Query: 477 XXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
DK++ ++P +V+ LAK A+ AS+ AA L
Sbjct: 121 L----------------------TDKLIDVEPTNVINLAKRALSASKHAAFL 150
>ref|XP_007027376.1| RNA polymerase sigma factor rpoD, putative [Theobroma cacao]
gi|508715981|gb|EOY07878.1| RNA polymerase sigma factor
rpoD, putative [Theobroma cacao]
Length = 568
Score = 121 bits (304), Expect = 2e-25
Identities = 75/178 (42%), Positives = 100/178 (56%), Gaps = 7/178 (3%)
Frame = +3
Query: 120 MEVGRNLLYSSPLFLPKTHFRSSI----PSSVPILHEQATLAVTSTPTTSITRHFPTSVL 287
ME RNLL P F +T +SS+ SSV + HEQA A TS P TS+ RHFPTSVL
Sbjct: 1 MEAARNLLSPPPTFSTRTQLKSSVFSTSSSSVLMFHEQAAPAATSIPITSVARHFPTSVL 60
Query: 288 LQEQRDEFRPLLQI---REDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRXXX 458
LQEQRD++RPL + +EDK D++Q +NG S EE S Q FE++
Sbjct: 61 LQEQRDDYRPLPVLHFFKEDKAYPGATDKQQIENGASLNEENASNNFGQL--GFEKKLLQ 118
Query: 459 XXXXXXXXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
E P + QS+ D +IV ++P +++ALAK+A+ AS+QAASL
Sbjct: 119 WPDLTQLLSLLESEENPSSTSNMQSVAADTKEIVDVEPSNIVALAKKALSASKQAASL 176
>ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223541372|gb|EEF42923.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 548
Score = 120 bits (300), Expect = 4e-25
Identities = 80/179 (44%), Positives = 104/179 (58%), Gaps = 8/179 (4%)
Frame = +3
Query: 120 MEVGRNLLYSSPLFLPKTHFRSSIPSS-------VPILHEQATLAVTSTPTTSITRHFPT 278
ME R L S P F +THF++S+ SS V +LHEQA AVTS PTTSI R+FPT
Sbjct: 1 METARTFLSSPPPFPSRTHFKNSLSSSDAYVDNFVFMLHEQAVPAVTSAPTTSIARNFPT 60
Query: 279 SVLLQEQRDEFRPLLQI-REDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRXX 455
SVLLQEQRDEFRPLL I +EDKT QAT+D +Q D G S E S DQ +
Sbjct: 61 SVLLQEQRDEFRPLLNIFKEDKTFQATVDTKQMDPGTSDQEGICSDVLDQLILHSNLSW- 119
Query: 456 XXXXXXXXXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
S+T QSI + D+++ ++P +V+ LA++A+ AS++AA L
Sbjct: 120 --------------------SLTMQSITTNTDELMVVEPTNVIDLARKALSASKEAALL 158
>ref|XP_004304450.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 554
Score = 114 bits (285), Expect = 2e-23
Identities = 82/179 (45%), Positives = 101/179 (56%), Gaps = 8/179 (4%)
Frame = +3
Query: 120 MEVGRNLLYSSPLFLPKTHFRSSIPSSVP-----ILHEQATLAVTSTPTTSITRHFPTSV 284
ME GR+ L SS F T R +P S P +LHEQA AVTS PT+ ITRHFPTSV
Sbjct: 1 MEAGRHFLSSSSAFPSTTQLRHPLPPSSPSTSVLMLHEQAAPAVTSVPTSFITRHFPTSV 60
Query: 285 LLQEQRDEFRPLLQI-REDKTSQATLDRRQTDNGVSFCEEKKSCQSDQY--LKDFERRXX 455
LLQEQRDEF+PLL I +E+K SQATLDR Q +N + E+ D Y +KDF +
Sbjct: 61 LLQEQRDEFKPLLHIFKEEKASQATLDRIQIENTTA---EEDFNIDDFYKLVKDFRQLHV 117
Query: 456 XXXXXXXXXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
L S TT ++ +D ++P DVL LAK A+ AS +AASL
Sbjct: 118 TPSQIGENSPTG----SALESNTTANVHMD------VEPSDVLTLAKHALSASLEAASL 166
>gb|EXC16188.1| RNA polymerase sigma factor rpoD [Morus notabilis]
Length = 543
Score = 111 bits (278), Expect = 2e-22
Identities = 72/173 (41%), Positives = 99/173 (57%), Gaps = 2/173 (1%)
Frame = +3
Query: 120 MEVGRNLLYSSPLFLPKTHFRSSIPSSVPI-LHEQATLAVTSTPTTSITRHFPTSVLLQE 296
MEVGRNLL P F +TH R+ +PSS +TS P TSI + F TSVLLQE
Sbjct: 1 MEVGRNLLSPPPSFPSRTHLRNYLPSSSSASTSANVATGITSMPATSIAQPFSTSVLLQE 60
Query: 297 QRDEFRPLLQI-REDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRXXXXXXXX 473
QRDEF+PLL++ +EDKTSQ L+RRQ D+G E+ +Q++ +FER
Sbjct: 61 QRDEFKPLLRVNKEDKTSQGVLNRRQNDSGALVHEDTLE-DYNQFVWEFERPSVHWPGFW 119
Query: 474 XXXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
K S+T ++ K V ++ D +ALAK+A++AS++AASL
Sbjct: 120 HVLPSLKTKVKLSSSLTMETTMGSCTKDVDVEVSDAIALAKKALMASKEAASL 172
>ref|XP_006410876.1| hypothetical protein EUTSA_v10016472mg [Eutrema salsugineum]
gi|312282671|dbj|BAJ34201.1| unnamed protein product
[Thellungiella halophila] gi|557112045|gb|ESQ52329.1|
hypothetical protein EUTSA_v10016472mg [Eutrema
salsugineum]
Length = 547
Score = 106 bits (264), Expect = 7e-21
Identities = 76/175 (43%), Positives = 100/175 (57%), Gaps = 4/175 (2%)
Frame = +3
Query: 120 MEVGRNLLYSSPLFLPKTHFRS--SIPSSVPILHEQ-ATLAVTSTPTTSITRHFPTSVLL 290
ME RNL+ SSP F KTH +S S PSSV +LHEQ AT V S TS++RHFP SVL
Sbjct: 1 MEATRNLVSSSPSFQTKTHLKSGFSSPSSVVMLHEQTATPVVNSRHLTSLSRHFPASVLS 60
Query: 291 QEQRDEFRPLLQ-IREDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRXXXXXX 467
QE R+E +PL +RED+TSQ TL+RRQ D VS E++K FE++
Sbjct: 61 QELREESKPLSHALREDRTSQLTLERRQFDELVSSREDEK----------FEQQLLHSAG 110
Query: 468 XXXXXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
EK L ++ + S + D CD++ALA++A+ AS+QAA L
Sbjct: 111 LWNLLISPLTTEKQLPAVVSPSADADL--------CDLVALAQKALSASKQAALL 157
>gb|EYU34473.1| hypothetical protein MIMGU_mgv1a003862mg [Mimulus guttatus]
Length = 559
Score = 105 bits (263), Expect = 9e-21
Identities = 71/176 (40%), Positives = 94/176 (53%), Gaps = 5/176 (2%)
Frame = +3
Query: 120 MEVGRNLLYSSPLFLPKTHFR--SSIPSSVPILHEQATLAVTSTPTTSITRHFPTSVLLQ 293
ME R+L+ S P F +TH R SS SSV +LHEQ T A+TS T S+ RH TSVL+Q
Sbjct: 1 METVRSLVSSPPQFPLRTHVRNCSSSCSSVLLLHEQVTPALTSLSTPSLARHTTTSVLIQ 60
Query: 294 EQRDEFRPLLQIREDKTSQATLDRRQ---TDNGVSFCEEKKSCQSDQYLKDFERRXXXXX 464
+QR+E RPLL +++D T Q T DRRQ T S E DQY D + +
Sbjct: 61 DQRNESRPLLSLKDDNTFQQTFDRRQMVTTPASSSSNEGNDKIDPDQYDNDLQLQLLRRP 120
Query: 465 XXXXXXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
K E P + T S+ A+ + + VLALA+EA A ++AAS+
Sbjct: 121 ELWYLWSSLQKKEHPFPTTTPNSLPSTAENVTGAEANHVLALAREAFSACKEAASI 176
>ref|XP_006410875.1| hypothetical protein EUTSA_v10016472mg [Eutrema salsugineum]
gi|557112044|gb|ESQ52328.1| hypothetical protein
EUTSA_v10016472mg [Eutrema salsugineum]
Length = 546
Score = 102 bits (254), Expect = 9e-20
Identities = 76/175 (43%), Positives = 100/175 (57%), Gaps = 4/175 (2%)
Frame = +3
Query: 120 MEVGRNLLYSSPLFLPKTHFRS--SIPSSVPILHEQ-ATLAVTSTPTTSITRHFPTSVLL 290
ME RNL+ SSP F KTH +S S PSSV +LHEQ AT V S TS++RHFP SVL
Sbjct: 1 MEATRNLVSSSPSFQTKTHLKSGFSSPSSV-MLHEQTATPVVNSRHLTSLSRHFPASVLS 59
Query: 291 QEQRDEFRPLLQ-IREDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRXXXXXX 467
QE R+E +PL +RED+TSQ TL+RRQ D VS E++K FE++
Sbjct: 60 QELREESKPLSHALREDRTSQLTLERRQFDELVSSREDEK----------FEQQLLHSAG 109
Query: 468 XXXXXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
EK L ++ + S + D CD++ALA++A+ AS+QAA L
Sbjct: 110 LWNLLISPLTTEKQLPAVVSPSADADL--------CDLVALAQKALSASKQAALL 156
>ref|XP_002881484.1| RNA polymerase sigma-70 factor [Arabidopsis lyrata subsp. lyrata]
gi|297327323|gb|EFH57743.1| RNA polymerase sigma-70
factor [Arabidopsis lyrata subsp. lyrata]
Length = 546
Score = 99.4 bits (246), Expect = 8e-19
Identities = 72/174 (41%), Positives = 94/174 (54%), Gaps = 3/174 (1%)
Frame = +3
Query: 120 MEVGRNLLYSSPLFLPKTHFRS-SIPSSVPILHEQATL-AVTSTPTTSITRHFPTSVLLQ 293
ME RNL+ SSP F KTH +S S PSSV +LHEQ T V S S++RHFP SVL Q
Sbjct: 1 MEATRNLVSSSPSFQTKTHLKSYSSPSSVVMLHEQTTTPVVNSRHLNSLSRHFPASVLSQ 60
Query: 294 EQRDEFRPLLQ-IREDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRXXXXXXX 470
E R+E RPL +RED+TSQ TL+RRQ D VS E++K FE++
Sbjct: 61 EPREESRPLSHALREDRTSQLTLERRQFDELVSSREDEK----------FEQQLLHSAGL 110
Query: 471 XXXXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
E L + + + CD++ALA++A+ AS+QAA L
Sbjct: 111 WNLLISPLTAETKLPPVVPPLADAEL--------CDIVALAQKALSASKQAALL 156
>ref|NP_565856.1| RNA polymerase sigma factor sigF [Arabidopsis thaliana]
gi|75173811|sp|Q9LD95.1|SIGF_ARATH RecName: Full=RNA
polymerase sigma factor sigF, chloroplastic; Short=Sigma
factor F; Short=Sigma-F; AltName: Full=Protein SINGLET
OXYGEN-LINKED DEATH ACTIVATOR 8; AltName: Full=RNA
polymerase sigma factor sig6; Short=Atsig6; Short=Sigma
factor 6; Flags: Precursor gi|7209640|dbj|BAA92288.1|
SigF [Arabidopsis thaliana] gi|7688083|emb|CAB89775.1|
sigma factor-like protein [Arabidopsis thaliana]
gi|16604647|gb|AAL24116.1| putative RNA polymerase
sigma-70 factor [Arabidopsis thaliana]
gi|20197948|gb|AAD31584.2| putative RNA polymerase
sigma-70 factor [Arabidopsis thaliana]
gi|20259557|gb|AAM14121.1| putative RNA polymerase
sigma-70 factor protein [Arabidopsis thaliana]
gi|330254238|gb|AEC09332.1| RNA polymerase sigma factor
sigF [Arabidopsis thaliana]
Length = 547
Score = 99.0 bits (245), Expect = 1e-18
Identities = 74/177 (41%), Positives = 98/177 (55%), Gaps = 6/177 (3%)
Frame = +3
Query: 120 MEVGRNLLYSSPLFLPKTHFRSSI--PSSVPILHEQATL-AVTSTPTTSITRHFPTSVLL 290
ME RNL+ SSP F KTH +SS PSSV +LH+Q T V S S++RHFP SVL
Sbjct: 1 MEATRNLVSSSPSFQTKTHLKSSYSSPSSVVMLHDQTTTPVVNSRHLNSLSRHFPASVLS 60
Query: 291 QEQRDEFRPLLQ-IREDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRXXXXXX 467
QE R+E RPL +R+D+TSQ TL+RRQ D VS E++K FE++
Sbjct: 61 QEPREESRPLSHALRDDRTSQLTLERRQFDELVSSREDEK----------FEQQLLHSTG 110
Query: 468 XXXXXXXXXKGEKPLLSMTTQSIELDA--DKIVFMKPCDVLALAKEAVLASRQAASL 632
L+S T +L A + + CDV+ALA++A+ AS+QAA L
Sbjct: 111 LWNL----------LISPLTSETKLPAVVSPLADAELCDVVALAQKALSASKQAALL 157
>ref|XP_003542550.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Glycine
max]
Length = 574
Score = 95.9 bits (237), Expect = 9e-18
Identities = 68/177 (38%), Positives = 96/177 (54%), Gaps = 6/177 (3%)
Frame = +3
Query: 120 MEVGRNLLYSSPLFLPKTHFR-SSIP----SSVPILHEQATLAVTSTPTTSITRHFPTSV 284
ME R + SSP F P+TH +++P +SV +L EQA+ V S + ++FP SV
Sbjct: 1 MEFSRTMFCSSPPFPPRTHHPWNTLPLSSSTSVLMLREQASPTVASWSSNFSAQNFPASV 60
Query: 285 LLQEQRDEFRPLLQI-REDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRXXXX 461
LLQEQRDE+RPLL + +EDKTSQA L RQ D V EE + +DQ + DF +
Sbjct: 61 LLQEQRDEYRPLLHMSKEDKTSQAMLSTRQMDT-VMVHEENNTENADQVVLDFRKHLHYW 119
Query: 462 XXXXXXXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
GE S T Q + D D+ C+ ++LAK+A+ S+Q +S+
Sbjct: 120 PHLQNLLASSQTGEIS-ASSTLQQVSSDLDRHTNGVQCNRVSLAKKALSTSKQGSSV 175