BLASTX nr result

ID: Akebia22_contig00004714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00004714
         (633 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF,...   140   3e-31
ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citr...   140   3e-31
ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF,...   139   5e-31
ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citr...   139   5e-31
ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF,...   139   9e-31
emb|CBI32760.3| unnamed protein product [Vitis vinifera]              137   2e-30
ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citr...   136   5e-30
ref|XP_007204994.1| hypothetical protein PRUPE_ppa003513mg [Prun...   134   3e-29
ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD ...   132   1e-28
ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protei...   130   2e-28
ref|XP_007027376.1| RNA polymerase sigma factor rpoD, putative [...   121   2e-25
ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [...   120   4e-25
ref|XP_004304450.1| PREDICTED: RNA polymerase sigma factor sigF,...   114   2e-23
gb|EXC16188.1| RNA polymerase sigma factor rpoD [Morus notabilis]     111   2e-22
ref|XP_006410876.1| hypothetical protein EUTSA_v10016472mg [Eutr...   106   7e-21
gb|EYU34473.1| hypothetical protein MIMGU_mgv1a003862mg [Mimulus...   105   9e-21
ref|XP_006410875.1| hypothetical protein EUTSA_v10016472mg [Eutr...   102   9e-20
ref|XP_002881484.1| RNA polymerase sigma-70 factor [Arabidopsis ...    99   8e-19
ref|NP_565856.1| RNA polymerase sigma factor sigF [Arabidopsis t...    99   1e-18
ref|XP_003542550.1| PREDICTED: RNA polymerase sigma factor sigF,...    96   9e-18

>ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           isoform X3 [Citrus sinensis]
          Length = 561

 Score =  140 bits (353), Expect = 3e-31
 Identities = 79/172 (45%), Positives = 105/172 (61%), Gaps = 1/172 (0%)
 Frame = +3

Query: 120 MEVGRNLLYSSPLFLPKTHFRSSIPSSVPILHEQATLAVTSTPTTSITRHFPTSVLLQEQ 299
           ME GRNLL S P F  +T  + S+ SS       +  AV S PT+S+ RHFPTSVLLQEQ
Sbjct: 1   MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSAPAVASVPTSSVARHFPTSVLLQEQ 60

Query: 300 RDEFRPLLQI-REDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRXXXXXXXXX 476
           RDE+RPLL + +EDKTSQAT D R  +    F EEK S   DQ ++D E +         
Sbjct: 61  RDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLVQDLEHQFLHWPDLWN 120

Query: 477 XXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
                 +GE P +S+T QS+  D ++ V  +P D +ALA++A+ AS++AASL
Sbjct: 121 LSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASL 172


>ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
           gi|557530789|gb|ESR41972.1| hypothetical protein
           CICLE_v10011376mg [Citrus clementina]
          Length = 561

 Score =  140 bits (353), Expect = 3e-31
 Identities = 79/172 (45%), Positives = 105/172 (61%), Gaps = 1/172 (0%)
 Frame = +3

Query: 120 MEVGRNLLYSSPLFLPKTHFRSSIPSSVPILHEQATLAVTSTPTTSITRHFPTSVLLQEQ 299
           ME GRNLL S P F  +T  + S+ SS       +  AV S PT+S+ RHFPTSVLLQEQ
Sbjct: 1   MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSAPAVASVPTSSVARHFPTSVLLQEQ 60

Query: 300 RDEFRPLLQI-REDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRXXXXXXXXX 476
           RDE+RPLL + +EDKTSQAT D R  +    F EEK S   DQ ++D E +         
Sbjct: 61  RDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLVQDLEHQFLHWPDLWN 120

Query: 477 XXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
                 +GE P +S+T QS+  D ++ V  +P D +ALA++A+ AS++AASL
Sbjct: 121 LSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASL 172


>ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           isoform X2 [Citrus sinensis]
          Length = 569

 Score =  139 bits (351), Expect = 5e-31
 Identities = 83/180 (46%), Positives = 110/180 (61%), Gaps = 9/180 (5%)
 Frame = +3

Query: 120 MEVGRNLLYSSPLFLPKTHFR--------SSIPSSVPILHEQATLAVTSTPTTSITRHFP 275
           ME GRNLL S P F  +T  +        SS  SSV + +EQ+  AV S PT+S+ RHFP
Sbjct: 1   MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSVLMHNEQSAPAVASVPTSSVARHFP 60

Query: 276 TSVLLQEQRDEFRPLLQI-REDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRX 452
           TSVLLQEQRDE+RPLL + +EDKTSQAT D R  +    F EEK S   DQ ++D E + 
Sbjct: 61  TSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLVQDLEHQF 120

Query: 453 XXXXXXXXXXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
                         +GE P +S+T QS+  D ++ V  +P D +ALA++A+ AS++AASL
Sbjct: 121 LHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASL 180


>ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
           gi|557530788|gb|ESR41971.1| hypothetical protein
           CICLE_v10011376mg [Citrus clementina]
          Length = 569

 Score =  139 bits (351), Expect = 5e-31
 Identities = 83/180 (46%), Positives = 110/180 (61%), Gaps = 9/180 (5%)
 Frame = +3

Query: 120 MEVGRNLLYSSPLFLPKTHFR--------SSIPSSVPILHEQATLAVTSTPTTSITRHFP 275
           ME GRNLL S P F  +T  +        SS  SSV + +EQ+  AV S PT+S+ RHFP
Sbjct: 1   MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSVLMHNEQSAPAVASVPTSSVARHFP 60

Query: 276 TSVLLQEQRDEFRPLLQI-REDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRX 452
           TSVLLQEQRDE+RPLL + +EDKTSQAT D R  +    F EEK S   DQ ++D E + 
Sbjct: 61  TSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLVQDLEHQF 120

Query: 453 XXXXXXXXXXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
                         +GE P +S+T QS+  D ++ V  +P D +ALA++A+ AS++AASL
Sbjct: 121 LHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASL 180


>ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           isoform X1 [Citrus sinensis]
          Length = 570

 Score =  139 bits (349), Expect = 9e-31
 Identities = 82/181 (45%), Positives = 110/181 (60%), Gaps = 10/181 (5%)
 Frame = +3

Query: 120 MEVGRNLLYSSPLFLPKTHFRSSIPSSVP--------ILH-EQATLAVTSTPTTSITRHF 272
           ME GRNLL S P F  +T  + S+ SS          ++H EQ+  AV S PT+S+ RHF
Sbjct: 1   MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSAVLMHNEQSAPAVASVPTSSVARHF 60

Query: 273 PTSVLLQEQRDEFRPLLQI-REDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERR 449
           PTSVLLQEQRDE+RPLL + +EDKTSQAT D R  +    F EEK S   DQ ++D E +
Sbjct: 61  PTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLVQDLEHQ 120

Query: 450 XXXXXXXXXXXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAAS 629
                          +GE P +S+T QS+  D ++ V  +P D +ALA++A+ AS++AAS
Sbjct: 121 FLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAAS 180

Query: 630 L 632
           L
Sbjct: 181 L 181


>emb|CBI32760.3| unnamed protein product [Vitis vinifera]
          Length = 561

 Score =  137 bits (346), Expect = 2e-30
 Identities = 85/173 (49%), Positives = 113/173 (65%), Gaps = 2/173 (1%)
 Frame = +3

Query: 120 MEVGRNLLYSSPLFLPKTHFRSSIPSSVPILHEQATLAVTSTPTTSITRHFPTSVLLQEQ 299
           ME G N+L S+P F P+THFR+S  SSV +LH+Q   AV S PTT I R FPTSVLLQEQ
Sbjct: 1   MEAGTNILSSTPSFPPRTHFRNS-SSSVLMLHDQVAPAVASIPTT-IARKFPTSVLLQEQ 58

Query: 300 RDEFRPLLQ-IREDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRXXXXXXXXX 476
           RDE+RP  Q +++++T QATL++RQ +  VS  +E+ S   +QY+ +FER+         
Sbjct: 59  RDEYRPFPQALKDERTFQATLEKRQMEIVVS-ADEENSDDHNQYMVNFERQLLLQPGLWY 117

Query: 477 XXXXXXKGEK-PLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
                  GEK P  S   +SI  D +  + +KPCDVLALAK+A+ AS+QA SL
Sbjct: 118 SLPSSQTGEKSPFSSSIMKSITTDIENSMDVKPCDVLALAKKALSASKQAVSL 170


>ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
           gi|557530787|gb|ESR41970.1| hypothetical protein
           CICLE_v10011376mg [Citrus clementina]
          Length = 558

 Score =  136 bits (343), Expect = 5e-30
 Identities = 78/172 (45%), Positives = 106/172 (61%), Gaps = 1/172 (0%)
 Frame = +3

Query: 120 MEVGRNLLYSSPLFLPKTHFRSSIPSSVPILHEQATLAVTSTPTTSITRHFPTSVLLQEQ 299
           ME GRNLL S P F  +T  + S+ SS       ++ +V S PT+S+ RHFPTSVLLQEQ
Sbjct: 1   MEAGRNLLSSPPSFPSRTRVKHSLSSSAS---SSSSSSVASVPTSSVARHFPTSVLLQEQ 57

Query: 300 RDEFRPLLQI-REDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRXXXXXXXXX 476
           RDE+RPLL + +EDKTSQAT D R  +    F EEK S   DQ ++D E +         
Sbjct: 58  RDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLVQDLEHQFLHWPDLWN 117

Query: 477 XXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
                 +GE P +S+T QS+  D ++ V  +P D +ALA++A+ AS++AASL
Sbjct: 118 LSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASL 169


>ref|XP_007204994.1| hypothetical protein PRUPE_ppa003513mg [Prunus persica]
           gi|462400636|gb|EMJ06193.1| hypothetical protein
           PRUPE_ppa003513mg [Prunus persica]
          Length = 568

 Score =  134 bits (336), Expect = 3e-29
 Identities = 83/178 (46%), Positives = 108/178 (60%), Gaps = 7/178 (3%)
 Frame = +3

Query: 120 MEVGRNLLYSSPLFLPKTHFRSSIPSSVP-----ILHEQATLAVTSTPTTSITRHFPTSV 284
           ME GR+ L SS  F   TH R  +PSS P     +LHEQA  AVTS P TS+ RHFPTSV
Sbjct: 1   MEAGRHFLSSSSAFPSTTHLRHPLPSSSPSTSVLMLHEQAVPAVTSVPITSVARHFPTSV 60

Query: 285 LLQEQRDEFRPLLQI-REDKTSQATLDRRQTDNGVSFCEEKKSCQSDQY-LKDFERRXXX 458
           LLQEQRDEF+PLL + +EDKTS+A LDR Q + G S  E+      D Y L +  +    
Sbjct: 61  LLQEQRDEFKPLLHVLKEDKTSEAALDRMQIETGASVHEDLDI--DDFYPLVNSSKPQLL 118

Query: 459 XXXXXXXXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
                        G KP   +T +S+   ++K + ++PC+V+ALAK+A+ ASR+AASL
Sbjct: 119 NHDILDVFSSLQTGAKPSTPLTLESLTTASNKHMDVEPCNVVALAKKALSASREAASL 176


>ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
          Length = 572

 Score =  132 bits (331), Expect = 1e-28
 Identities = 84/183 (45%), Positives = 112/183 (61%), Gaps = 12/183 (6%)
 Frame = +3

Query: 120 MEVGRNLLYSSPLFLPKTHFRSSIPSS----------VPILHEQATLAVTSTPTTSITRH 269
           ME G N+L S+P F P+THFR+S  S           V +LH+Q   AV S PTT I R 
Sbjct: 1   MEAGTNILSSTPSFPPRTHFRNSSSSGNAFFFYVVLFVLMLHDQVAPAVASIPTT-IARK 59

Query: 270 FPTSVLLQEQRDEFRPLLQ-IREDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFER 446
           FPTSVLLQEQRDE+RP  Q +++++T QATL++RQ +  VS  +E+ S   +QY+ +FER
Sbjct: 60  FPTSVLLQEQRDEYRPFPQALKDERTFQATLEKRQMEIVVS-ADEENSDDHNQYMVNFER 118

Query: 447 RXXXXXXXXXXXXXXXKGEK-PLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQA 623
           +                GEK P  S   +SI  D +  + +KPCDVLALAK+A+ AS+QA
Sbjct: 119 QLLLQPGLWYSLPSSQTGEKSPFSSSIMKSITTDIENSMDVKPCDVLALAKKALSASKQA 178

Query: 624 ASL 632
            SL
Sbjct: 179 VSL 181


>ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protein [Populus trichocarpa]
           gi|550336129|gb|ERP59223.1| RNA POLYMERASE SIGMA-70
           FACTOR family protein [Populus trichocarpa]
          Length = 535

 Score =  130 bits (328), Expect = 2e-28
 Identities = 81/172 (47%), Positives = 104/172 (60%), Gaps = 1/172 (0%)
 Frame = +3

Query: 120 MEVGRNLLYSSPLFLPKTHFRSSIPSSVPILHEQATLAVTSTPTTSITRHFPTSVLLQEQ 299
           ME GR LL SSP F  +TH ++S+ SSV IL EQAT AV+S PTTS  +HFPTSVLLQEQ
Sbjct: 1   MEAGRTLLSSSPSFPTRTHLKNSLTSSVLILREQATPAVSSIPTTSTAQHFPTSVLLQEQ 60

Query: 300 RDEFRPLLQI-REDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRXXXXXXXXX 476
           RDEFRPL  I +ED+ SQATLDRR+T+ G S  E K S + DQ +++FE +         
Sbjct: 61  RDEFRPLQNIFKEDRASQATLDRRKTEIGTSGHEGKDSDELDQLVENFEYQLHHWPAYWN 120

Query: 477 XXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
                                   DK++ ++P +V+ LAK A+ AS+ AA L
Sbjct: 121 L----------------------TDKLIDVEPTNVINLAKRALSASKHAAFL 150


>ref|XP_007027376.1| RNA polymerase sigma factor rpoD, putative [Theobroma cacao]
           gi|508715981|gb|EOY07878.1| RNA polymerase sigma factor
           rpoD, putative [Theobroma cacao]
          Length = 568

 Score =  121 bits (304), Expect = 2e-25
 Identities = 75/178 (42%), Positives = 100/178 (56%), Gaps = 7/178 (3%)
 Frame = +3

Query: 120 MEVGRNLLYSSPLFLPKTHFRSSI----PSSVPILHEQATLAVTSTPTTSITRHFPTSVL 287
           ME  RNLL   P F  +T  +SS+     SSV + HEQA  A TS P TS+ RHFPTSVL
Sbjct: 1   MEAARNLLSPPPTFSTRTQLKSSVFSTSSSSVLMFHEQAAPAATSIPITSVARHFPTSVL 60

Query: 288 LQEQRDEFRPLLQI---REDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRXXX 458
           LQEQRD++RPL  +   +EDK      D++Q +NG S  EE  S    Q    FE++   
Sbjct: 61  LQEQRDDYRPLPVLHFFKEDKAYPGATDKQQIENGASLNEENASNNFGQL--GFEKKLLQ 118

Query: 459 XXXXXXXXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
                         E P  +   QS+  D  +IV ++P +++ALAK+A+ AS+QAASL
Sbjct: 119 WPDLTQLLSLLESEENPSSTSNMQSVAADTKEIVDVEPSNIVALAKKALSASKQAASL 176


>ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223541372|gb|EEF42923.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 548

 Score =  120 bits (300), Expect = 4e-25
 Identities = 80/179 (44%), Positives = 104/179 (58%), Gaps = 8/179 (4%)
 Frame = +3

Query: 120 MEVGRNLLYSSPLFLPKTHFRSSIPSS-------VPILHEQATLAVTSTPTTSITRHFPT 278
           ME  R  L S P F  +THF++S+ SS       V +LHEQA  AVTS PTTSI R+FPT
Sbjct: 1   METARTFLSSPPPFPSRTHFKNSLSSSDAYVDNFVFMLHEQAVPAVTSAPTTSIARNFPT 60

Query: 279 SVLLQEQRDEFRPLLQI-REDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRXX 455
           SVLLQEQRDEFRPLL I +EDKT QAT+D +Q D G S  E   S   DQ +        
Sbjct: 61  SVLLQEQRDEFRPLLNIFKEDKTFQATVDTKQMDPGTSDQEGICSDVLDQLILHSNLSW- 119

Query: 456 XXXXXXXXXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
                               S+T QSI  + D+++ ++P +V+ LA++A+ AS++AA L
Sbjct: 120 --------------------SLTMQSITTNTDELMVVEPTNVIDLARKALSASKEAALL 158


>ref|XP_004304450.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 554

 Score =  114 bits (285), Expect = 2e-23
 Identities = 82/179 (45%), Positives = 101/179 (56%), Gaps = 8/179 (4%)
 Frame = +3

Query: 120 MEVGRNLLYSSPLFLPKTHFRSSIPSSVP-----ILHEQATLAVTSTPTTSITRHFPTSV 284
           ME GR+ L SS  F   T  R  +P S P     +LHEQA  AVTS PT+ ITRHFPTSV
Sbjct: 1   MEAGRHFLSSSSAFPSTTQLRHPLPPSSPSTSVLMLHEQAAPAVTSVPTSFITRHFPTSV 60

Query: 285 LLQEQRDEFRPLLQI-REDKTSQATLDRRQTDNGVSFCEEKKSCQSDQY--LKDFERRXX 455
           LLQEQRDEF+PLL I +E+K SQATLDR Q +N  +   E+     D Y  +KDF +   
Sbjct: 61  LLQEQRDEFKPLLHIFKEEKASQATLDRIQIENTTA---EEDFNIDDFYKLVKDFRQLHV 117

Query: 456 XXXXXXXXXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
                             L S TT ++ +D      ++P DVL LAK A+ AS +AASL
Sbjct: 118 TPSQIGENSPTG----SALESNTTANVHMD------VEPSDVLTLAKHALSASLEAASL 166


>gb|EXC16188.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 543

 Score =  111 bits (278), Expect = 2e-22
 Identities = 72/173 (41%), Positives = 99/173 (57%), Gaps = 2/173 (1%)
 Frame = +3

Query: 120 MEVGRNLLYSSPLFLPKTHFRSSIPSSVPI-LHEQATLAVTSTPTTSITRHFPTSVLLQE 296
           MEVGRNLL   P F  +TH R+ +PSS            +TS P TSI + F TSVLLQE
Sbjct: 1   MEVGRNLLSPPPSFPSRTHLRNYLPSSSSASTSANVATGITSMPATSIAQPFSTSVLLQE 60

Query: 297 QRDEFRPLLQI-REDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRXXXXXXXX 473
           QRDEF+PLL++ +EDKTSQ  L+RRQ D+G    E+      +Q++ +FER         
Sbjct: 61  QRDEFKPLLRVNKEDKTSQGVLNRRQNDSGALVHEDTLE-DYNQFVWEFERPSVHWPGFW 119

Query: 474 XXXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
                     K   S+T ++      K V ++  D +ALAK+A++AS++AASL
Sbjct: 120 HVLPSLKTKVKLSSSLTMETTMGSCTKDVDVEVSDAIALAKKALMASKEAASL 172


>ref|XP_006410876.1| hypothetical protein EUTSA_v10016472mg [Eutrema salsugineum]
           gi|312282671|dbj|BAJ34201.1| unnamed protein product
           [Thellungiella halophila] gi|557112045|gb|ESQ52329.1|
           hypothetical protein EUTSA_v10016472mg [Eutrema
           salsugineum]
          Length = 547

 Score =  106 bits (264), Expect = 7e-21
 Identities = 76/175 (43%), Positives = 100/175 (57%), Gaps = 4/175 (2%)
 Frame = +3

Query: 120 MEVGRNLLYSSPLFLPKTHFRS--SIPSSVPILHEQ-ATLAVTSTPTTSITRHFPTSVLL 290
           ME  RNL+ SSP F  KTH +S  S PSSV +LHEQ AT  V S   TS++RHFP SVL 
Sbjct: 1   MEATRNLVSSSPSFQTKTHLKSGFSSPSSVVMLHEQTATPVVNSRHLTSLSRHFPASVLS 60

Query: 291 QEQRDEFRPLLQ-IREDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRXXXXXX 467
           QE R+E +PL   +RED+TSQ TL+RRQ D  VS  E++K          FE++      
Sbjct: 61  QELREESKPLSHALREDRTSQLTLERRQFDELVSSREDEK----------FEQQLLHSAG 110

Query: 468 XXXXXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
                      EK L ++ + S + D         CD++ALA++A+ AS+QAA L
Sbjct: 111 LWNLLISPLTTEKQLPAVVSPSADADL--------CDLVALAQKALSASKQAALL 157


>gb|EYU34473.1| hypothetical protein MIMGU_mgv1a003862mg [Mimulus guttatus]
          Length = 559

 Score =  105 bits (263), Expect = 9e-21
 Identities = 71/176 (40%), Positives = 94/176 (53%), Gaps = 5/176 (2%)
 Frame = +3

Query: 120 MEVGRNLLYSSPLFLPKTHFR--SSIPSSVPILHEQATLAVTSTPTTSITRHFPTSVLLQ 293
           ME  R+L+ S P F  +TH R  SS  SSV +LHEQ T A+TS  T S+ RH  TSVL+Q
Sbjct: 1   METVRSLVSSPPQFPLRTHVRNCSSSCSSVLLLHEQVTPALTSLSTPSLARHTTTSVLIQ 60

Query: 294 EQRDEFRPLLQIREDKTSQATLDRRQ---TDNGVSFCEEKKSCQSDQYLKDFERRXXXXX 464
           +QR+E RPLL +++D T Q T DRRQ   T    S  E       DQY  D + +     
Sbjct: 61  DQRNESRPLLSLKDDNTFQQTFDRRQMVTTPASSSSNEGNDKIDPDQYDNDLQLQLLRRP 120

Query: 465 XXXXXXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
                     K E P  + T  S+   A+ +   +   VLALA+EA  A ++AAS+
Sbjct: 121 ELWYLWSSLQKKEHPFPTTTPNSLPSTAENVTGAEANHVLALAREAFSACKEAASI 176


>ref|XP_006410875.1| hypothetical protein EUTSA_v10016472mg [Eutrema salsugineum]
           gi|557112044|gb|ESQ52328.1| hypothetical protein
           EUTSA_v10016472mg [Eutrema salsugineum]
          Length = 546

 Score =  102 bits (254), Expect = 9e-20
 Identities = 76/175 (43%), Positives = 100/175 (57%), Gaps = 4/175 (2%)
 Frame = +3

Query: 120 MEVGRNLLYSSPLFLPKTHFRS--SIPSSVPILHEQ-ATLAVTSTPTTSITRHFPTSVLL 290
           ME  RNL+ SSP F  KTH +S  S PSSV +LHEQ AT  V S   TS++RHFP SVL 
Sbjct: 1   MEATRNLVSSSPSFQTKTHLKSGFSSPSSV-MLHEQTATPVVNSRHLTSLSRHFPASVLS 59

Query: 291 QEQRDEFRPLLQ-IREDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRXXXXXX 467
           QE R+E +PL   +RED+TSQ TL+RRQ D  VS  E++K          FE++      
Sbjct: 60  QELREESKPLSHALREDRTSQLTLERRQFDELVSSREDEK----------FEQQLLHSAG 109

Query: 468 XXXXXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
                      EK L ++ + S + D         CD++ALA++A+ AS+QAA L
Sbjct: 110 LWNLLISPLTTEKQLPAVVSPSADADL--------CDLVALAQKALSASKQAALL 156


>ref|XP_002881484.1| RNA polymerase sigma-70 factor [Arabidopsis lyrata subsp. lyrata]
           gi|297327323|gb|EFH57743.1| RNA polymerase sigma-70
           factor [Arabidopsis lyrata subsp. lyrata]
          Length = 546

 Score = 99.4 bits (246), Expect = 8e-19
 Identities = 72/174 (41%), Positives = 94/174 (54%), Gaps = 3/174 (1%)
 Frame = +3

Query: 120 MEVGRNLLYSSPLFLPKTHFRS-SIPSSVPILHEQATL-AVTSTPTTSITRHFPTSVLLQ 293
           ME  RNL+ SSP F  KTH +S S PSSV +LHEQ T   V S    S++RHFP SVL Q
Sbjct: 1   MEATRNLVSSSPSFQTKTHLKSYSSPSSVVMLHEQTTTPVVNSRHLNSLSRHFPASVLSQ 60

Query: 294 EQRDEFRPLLQ-IREDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRXXXXXXX 470
           E R+E RPL   +RED+TSQ TL+RRQ D  VS  E++K          FE++       
Sbjct: 61  EPREESRPLSHALREDRTSQLTLERRQFDELVSSREDEK----------FEQQLLHSAGL 110

Query: 471 XXXXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
                     E  L  +     + +         CD++ALA++A+ AS+QAA L
Sbjct: 111 WNLLISPLTAETKLPPVVPPLADAEL--------CDIVALAQKALSASKQAALL 156


>ref|NP_565856.1| RNA polymerase sigma factor sigF [Arabidopsis thaliana]
           gi|75173811|sp|Q9LD95.1|SIGF_ARATH RecName: Full=RNA
           polymerase sigma factor sigF, chloroplastic; Short=Sigma
           factor F; Short=Sigma-F; AltName: Full=Protein SINGLET
           OXYGEN-LINKED DEATH ACTIVATOR 8; AltName: Full=RNA
           polymerase sigma factor sig6; Short=Atsig6; Short=Sigma
           factor 6; Flags: Precursor gi|7209640|dbj|BAA92288.1|
           SigF [Arabidopsis thaliana] gi|7688083|emb|CAB89775.1|
           sigma factor-like protein [Arabidopsis thaliana]
           gi|16604647|gb|AAL24116.1| putative RNA polymerase
           sigma-70 factor [Arabidopsis thaliana]
           gi|20197948|gb|AAD31584.2| putative RNA polymerase
           sigma-70 factor [Arabidopsis thaliana]
           gi|20259557|gb|AAM14121.1| putative RNA polymerase
           sigma-70 factor protein [Arabidopsis thaliana]
           gi|330254238|gb|AEC09332.1| RNA polymerase sigma factor
           sigF [Arabidopsis thaliana]
          Length = 547

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 74/177 (41%), Positives = 98/177 (55%), Gaps = 6/177 (3%)
 Frame = +3

Query: 120 MEVGRNLLYSSPLFLPKTHFRSSI--PSSVPILHEQATL-AVTSTPTTSITRHFPTSVLL 290
           ME  RNL+ SSP F  KTH +SS   PSSV +LH+Q T   V S    S++RHFP SVL 
Sbjct: 1   MEATRNLVSSSPSFQTKTHLKSSYSSPSSVVMLHDQTTTPVVNSRHLNSLSRHFPASVLS 60

Query: 291 QEQRDEFRPLLQ-IREDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRXXXXXX 467
           QE R+E RPL   +R+D+TSQ TL+RRQ D  VS  E++K          FE++      
Sbjct: 61  QEPREESRPLSHALRDDRTSQLTLERRQFDELVSSREDEK----------FEQQLLHSTG 110

Query: 468 XXXXXXXXXKGEKPLLSMTTQSIELDA--DKIVFMKPCDVLALAKEAVLASRQAASL 632
                         L+S  T   +L A    +   + CDV+ALA++A+ AS+QAA L
Sbjct: 111 LWNL----------LISPLTSETKLPAVVSPLADAELCDVVALAQKALSASKQAALL 157


>ref|XP_003542550.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Glycine
           max]
          Length = 574

 Score = 95.9 bits (237), Expect = 9e-18
 Identities = 68/177 (38%), Positives = 96/177 (54%), Gaps = 6/177 (3%)
 Frame = +3

Query: 120 MEVGRNLLYSSPLFLPKTHFR-SSIP----SSVPILHEQATLAVTSTPTTSITRHFPTSV 284
           ME  R +  SSP F P+TH   +++P    +SV +L EQA+  V S  +    ++FP SV
Sbjct: 1   MEFSRTMFCSSPPFPPRTHHPWNTLPLSSSTSVLMLREQASPTVASWSSNFSAQNFPASV 60

Query: 285 LLQEQRDEFRPLLQI-REDKTSQATLDRRQTDNGVSFCEEKKSCQSDQYLKDFERRXXXX 461
           LLQEQRDE+RPLL + +EDKTSQA L  RQ D  V   EE  +  +DQ + DF +     
Sbjct: 61  LLQEQRDEYRPLLHMSKEDKTSQAMLSTRQMDT-VMVHEENNTENADQVVLDFRKHLHYW 119

Query: 462 XXXXXXXXXXXKGEKPLLSMTTQSIELDADKIVFMKPCDVLALAKEAVLASRQAASL 632
                       GE    S T Q +  D D+      C+ ++LAK+A+  S+Q +S+
Sbjct: 120 PHLQNLLASSQTGEIS-ASSTLQQVSSDLDRHTNGVQCNRVSLAKKALSTSKQGSSV 175


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