BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00001361
         (2877 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007036533.1| CRS1 / YhbY domain-containing protein [Theob...   965   0.0  
emb|CBI15459.3| unnamed protein product [Vitis vinifera]              953   0.0  
emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]   951   0.0  
ref|XP_007211308.1| hypothetical protein PRUPE_ppa001468mg [Prun...   951   0.0  
ref|XP_004300521.1| PREDICTED: chloroplastic group IIA intron sp...   937   0.0  
gb|EXB56911.1| Chloroplastic group IIA intron splicing facilitat...   926   0.0  
ref|XP_002317913.2| hypothetical protein POPTR_0012s05260g [Popu...   918   0.0  
ref|XP_006440981.1| hypothetical protein CICLE_v10018859mg [Citr...   891   0.0  
ref|XP_006440978.1| hypothetical protein CICLE_v10018859mg [Citr...   891   0.0  
ref|XP_006485796.1| PREDICTED: chloroplastic group IIA intron sp...   890   0.0  
ref|XP_006842297.1| hypothetical protein AMTR_s00079p00107040 [A...   884   0.0  
ref|XP_002532154.1| conserved hypothetical protein [Ricinus comm...   880   0.0  
ref|XP_006406610.1| hypothetical protein EUTSA_v10020034mg [Eutr...   874   0.0  
ref|XP_006341605.1| PREDICTED: chloroplastic group IIA intron sp...   867   0.0  
ref|XP_002883129.1| EMB1865 [Arabidopsis lyrata subsp. lyrata] g...   867   0.0  
ref|XP_004235759.1| PREDICTED: chloroplastic group IIA intron sp...   865   0.0  
ref|NP_188468.1| CRS1 / YhbY domain-containing protein EMB1865 [...   861   0.0  
ref|XP_003533366.1| PREDICTED: chloroplastic group IIA intron sp...   860   0.0  
ref|XP_003530015.2| PREDICTED: chloroplastic group IIA intron sp...   853   0.0  
ref|XP_004512920.1| PREDICTED: chloroplastic group IIA intron sp...   851   0.0  

>ref|XP_007036533.1| CRS1 / YhbY domain-containing protein [Theobroma cacao]
            gi|508773778|gb|EOY21034.1| CRS1 / YhbY domain-containing
            protein [Theobroma cacao]
          Length = 919

 Score =  965 bits (2494), Expect = 0.0
 Identities = 514/774 (66%), Positives = 584/774 (75%), Gaps = 5/774 (0%)
 Frame = +1

Query: 103  MAFCTAKLTEVPLHNSIPLRXXXXXXXXXXXXXXXXXXXXXXX--KPFST-STSSLRSTE 273
            MAF T K TE+PL  S+P                           +PFS+  T +  S++
Sbjct: 66   MAFATTKFTEMPLRTSLPFASYSYSYSSSSLNLFFSAPKPSFRFFRPFSSLRTGNSPSSK 125

Query: 274  HIXXXXXXXXXXXXXXXXVTSAPWLNKWSSVNSS-LDTDKRQKVEDDRAESRYFDGDKGR 450
                                S+  L  WSS +   + +D   K +    E+RYFD DK +
Sbjct: 126  FNRYSYPWDQEASVPPNSSASSSSLQAWSSPSQKVIQSDGDDKTD---VETRYFDRDKSQ 182

Query: 451  GAIERIVYRLRNLGLESXXXXXXXXXXXXXXXXXXXMPCNGEEKLGELLQRKWSRPDSII 630
             AIERIV RLRNLGL S                    P  GEE+LG+LL+R+W RPD+++
Sbjct: 183  SAIERIVLRLRNLGLGSDDEDEGEDETDQYNST----PVTGEERLGDLLKREWVRPDTML 238

Query: 631  VDEDEDEGGLLPWXXXXXXXXXXXXXXXGLKKKRVKAPTLAELTIEDVXXXXXXXXXXXX 810
            ++ +++E  +LPW               G+KK+RV+APTLAELTIED             
Sbjct: 239  IEREKEEA-VLPWERDEAEVEVVKEGVLGVKKRRVRAPTLAELTIEDEELRRLRRMGMYL 297

Query: 811  XXXINIPKAGITQVILETIHDKWRKSELVRLKFHETLATDMKTAHEIVERRTGGLVIWRS 990
               IN+PKAGITQ +LE IHDKWRK ELVRLKFHE LATDMKTAHEIVERRTGGLV+WRS
Sbjct: 298  RERINVPKAGITQAVLEKIHDKWRKEELVRLKFHEVLATDMKTAHEIVERRTGGLVLWRS 357

Query: 991  GSVMVVYRGTNYERPSLRSQSVLREGDTLFVPSISSADHLIAKNGNDAISIPEKSEPYFM 1170
            GSVMVVYRG+NYE PS RSQS+ REG+ LF+P +SSA + +  +     S PEK EP  +
Sbjct: 358  GSVMVVYRGSNYEGPS-RSQSIDREGEALFIPDVSSASNAVRGSETGKTSTPEKCEPVVV 416

Query: 1171 SPD-SERMTQEEAEYNSLLDGLGPRFIDWWGTGLLPVDADLLPSTIPGYKTPFRLLPIGM 1347
             P+ SE MT+EEAEYNSLLDG+GPRF++WWGTG+LPVDADLLP  IPGYKTPFRLLP GM
Sbjct: 417  KPERSESMTEEEAEYNSLLDGVGPRFVEWWGTGVLPVDADLLPQKIPGYKTPFRLLPAGM 476

Query: 1348 RPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIVKLWDKSLVVKIAVKRGIQNTN 1527
            RPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAI+KLW+KSLVVKIAVKRGIQNTN
Sbjct: 477  RPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSLVVKIAVKRGIQNTN 536

Query: 1528 NKLMAEELKNLTGGILLLRNKYYIVIYRGKDFLPTSVAATLAERQELTKEIQDVEEKVRS 1707
            NKLMAEELKNLTGG+LLLRNKY+IVIYRGKDFLPTSVAA LAERQELTK+IQDVEEKVR 
Sbjct: 537  NKLMAEELKNLTGGVLLLRNKYFIVIYRGKDFLPTSVAAALAERQELTKQIQDVEEKVRI 596

Query: 1708 GGVGFAPTNRFEGKALAGTLAEFHEAQARWGREISVEEHEKMKEEASKAKNARIVKRIEH 1887
              V  A +   +G+A AGTLAEF+EAQA WGREIS EE EKM EEASKAK+AR+VKR+EH
Sbjct: 597  RAVEPAQSGEDKGEAPAGTLAEFYEAQACWGREISAEEREKMIEEASKAKHARLVKRVEH 656

Query: 1888 KLAIAQAKTLRAERLLAKIEVSMVPAGPSDDQETITDEERFMFRRIGLRMKAYLPIGIRG 2067
            KLA+AQAK LRAERLLAKIE SM+PA P  DQETITDEER MFRR+GLRMK YLP+GIRG
Sbjct: 657  KLAVAQAKKLRAERLLAKIESSMIPAAPDYDQETITDEERVMFRRVGLRMKPYLPLGIRG 716

Query: 2068 VFDGVIENMHLHWKHRELVKLISKQKTLSFVEDTARLLEYESGGILVAVEKVPKGYALIY 2247
            VFDGVIENMHLHWKHRELVKLISKQKTL+FVEDTARLLE+ESGGILVA+E+VPKGYALIY
Sbjct: 717  VFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEFESGGILVAIERVPKGYALIY 776

Query: 2248 YRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELESAIEQMKTEI 2409
            YRGKNY RPIS+RPRNLLTKAKALKRSVAMQRHEALSQHISELE  IE+MK EI
Sbjct: 777  YRGKNYHRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEEMKKEI 830


>emb|CBI15459.3| unnamed protein product [Vitis vinifera]
          Length = 830

 Score =  953 bits (2464), Expect = 0.0
 Identities = 493/695 (70%), Positives = 557/695 (80%), Gaps = 4/695 (0%)
 Frame = +1

Query: 343  WLNKWSSVNSSLDTDKR--QKVEDDRAESRYFDGDKGRGAIERIVYRLRNLGLESXXXXX 516
            W+NKW S N S++++ +       D  ESRYFDG  G  AIERIV RLRNLGL S     
Sbjct: 78   WINKWPSPNPSIESEHKGIDSKGRDGTESRYFDGRSGTSAIERIVLRLRNLGLGSDDEDK 137

Query: 517  XXXXXXXXXXXXXXMPCNGEEKLGELLQRKWSRPDSIIVDEDEDEGGLLPWXXXXXXXXX 696
                          MP  G+EKLG+LLQR W RPDS+++++++++  +LPW         
Sbjct: 138  NEGEVESGDT----MPVTGDEKLGDLLQRDWVRPDSMLIEDEDEDDMILPWERGEERQEE 193

Query: 697  XXXXXXGLKKKRVKAPTLAELTIEDVXXXXXXXXXXXXXXXINIPKAGITQVILETIHDK 876
                   LK++ V+APTLAELTIED                IN+PKAGITQ +L  IH+K
Sbjct: 194  EGDGR--LKRRAVRAPTLAELTIEDEELRRLRRLGMTIRERINVPKAGITQAVLGKIHEK 251

Query: 877  WRKSELVRLKFHETLATDMKTAHEIVERRTGGLVIWRSGSVMVVYRGTNYERPSLRSQSV 1056
            WRK ELVRLKFHE LA DMKTAHEIVERRTGGLV WRSGSVMVV+RGTNYE P  + Q V
Sbjct: 252  WRKEELVRLKFHEALAHDMKTAHEIVERRTGGLVTWRSGSVMVVFRGTNYEGPP-KPQPV 310

Query: 1057 LREGDTLFVPSISSADHLIAKNGNDAISIPEKSEPYFMSP-DSERMTQEEAEYNSLLDGL 1233
              EGD+LFVP +SS D+   +N N+     EK      +P  +E MT+EEAEYNSLLDGL
Sbjct: 311  DGEGDSLFVPDVSSVDNPAMRNDNNGGPTLEKGSLPVRNPVHAENMTEEEAEYNSLLDGL 370

Query: 1234 GPRFIDWWGTGLLPVDADLLPSTIPGYKTPFRLLPIGMRPRLTNAEMTNLRKLAKSLPCH 1413
            GPRF+DWWGTG+LPVD DLLP +IPGYKTP R+LP GMRPRLTNAEMTNLRKLAKSLPCH
Sbjct: 371  GPRFVDWWGTGVLPVDGDLLPQSIPGYKTPLRILPTGMRPRLTNAEMTNLRKLAKSLPCH 430

Query: 1414 FALGRNRNHQGLAAAIVKLWDKSLVVKIAVKRGIQNTNNKLMAEELKNLTGGILLLRNKY 1593
            FALGRNRNHQGLAAAI+KLW+KS+VVKIAVK GIQNTNNKLMAEE+KNLTGG+LLLRNKY
Sbjct: 431  FALGRNRNHQGLAAAIIKLWEKSIVVKIAVKPGIQNTNNKLMAEEIKNLTGGVLLLRNKY 490

Query: 1594 YIVIYRGKDFLPTSVAATLAERQELTKEIQDVEEKVRSGGVGFAPTNRFE-GKALAGTLA 1770
            YIVIYRGKDFLPTSVAA L+ER+ELTK IQ VEEKVR+GG    P+     G+ LAGTLA
Sbjct: 491  YIVIYRGKDFLPTSVAAALSEREELTKHIQVVEEKVRTGGAEAIPSGEDGVGQPLAGTLA 550

Query: 1771 EFHEAQARWGREISVEEHEKMKEEASKAKNARIVKRIEHKLAIAQAKTLRAERLLAKIEV 1950
            EF+EAQARWGREIS EEHEKM EEAS+AK+AR+VKRIEHKLA+AQAK LRAERLLAKIE 
Sbjct: 551  EFYEAQARWGREISAEEHEKMIEEASRAKSARVVKRIEHKLALAQAKKLRAERLLAKIEA 610

Query: 1951 SMVPAGPSDDQETITDEERFMFRRIGLRMKAYLPIGIRGVFDGVIENMHLHWKHRELVKL 2130
            SM+PAGPSDDQETITDEERFMFRR+GLRMKAYL +G+RGVFDGVIENMHLHWKHRELVKL
Sbjct: 611  SMIPAGPSDDQETITDEERFMFRRLGLRMKAYLLLGVRGVFDGVIENMHLHWKHRELVKL 670

Query: 2131 ISKQKTLSFVEDTARLLEYESGGILVAVEKVPKGYALIYYRGKNYQRPISIRPRNLLTKA 2310
            ISKQKTL+FVEDTARLLEYESGGILVA+E+VPKGYALIYYRGKNY+RP+S+RPRNLLTKA
Sbjct: 671  ISKQKTLAFVEDTARLLEYESGGILVAIERVPKGYALIYYRGKNYRRPVSLRPRNLLTKA 730

Query: 2311 KALKRSVAMQRHEALSQHISELESAIEQMKTEIAE 2415
            KALKRSVAMQRHEALSQHISELE  IEQMK EI +
Sbjct: 731  KALKRSVAMQRHEALSQHISELERTIEQMKMEIGD 765


>emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]
          Length = 850

 Score =  951 bits (2459), Expect = 0.0
 Identities = 492/695 (70%), Positives = 556/695 (80%), Gaps = 4/695 (0%)
 Frame = +1

Query: 343  WLNKWSSVNSSLDTDKR--QKVEDDRAESRYFDGDKGRGAIERIVYRLRNLGLESXXXXX 516
            W+NKW S N S++++ +       D  ESRYFDG  G  AIERIV RLRNLGL S     
Sbjct: 78   WINKWPSPNPSIESEHKGIDSKGRDGTESRYFDGRSGTSAIERIVLRLRNLGLGSDDEDK 137

Query: 517  XXXXXXXXXXXXXXMPCNGEEKLGELLQRKWSRPDSIIVDEDEDEGGLLPWXXXXXXXXX 696
                          MP  G+EKLG+LLQR W RPDS+++++++++  +LPW         
Sbjct: 138  NEGEVESGDT----MPVTGDEKLGDLLQRDWVRPDSMLIEDEDEDDMILPWERGEERQEE 193

Query: 697  XXXXXXGLKKKRVKAPTLAELTIEDVXXXXXXXXXXXXXXXINIPKAGITQVILETIHDK 876
                   LK++ V+APTLAELTIED                IN+PKAGITQ +L  IH+K
Sbjct: 194  EGDGR--LKRRAVRAPTLAELTIEDEELRRLRRLGMTIRERINVPKAGITQAVLGKIHEK 251

Query: 877  WRKSELVRLKFHETLATDMKTAHEIVERRTGGLVIWRSGSVMVVYRGTNYERPSLRSQSV 1056
            WRK ELVRLKFHE LA DMKTAHEIVERRTGGLV WRSGSVMVV+RGTNYE P  + Q V
Sbjct: 252  WRKEELVRLKFHEALAHDMKTAHEIVERRTGGLVTWRSGSVMVVFRGTNYEGPP-KPQPV 310

Query: 1057 LREGDTLFVPSISSADHLIAKNGNDAISIPEKSEPYFMSP-DSERMTQEEAEYNSLLDGL 1233
              EGD+LFVP +SS D+   +N N+     EK      +P  +E MT+EEAEYNSLLDGL
Sbjct: 311  DGEGDSLFVPDVSSVDNPAMRNDNNGGPTLEKGSLPVRNPVHAENMTEEEAEYNSLLDGL 370

Query: 1234 GPRFIDWWGTGLLPVDADLLPSTIPGYKTPFRLLPIGMRPRLTNAEMTNLRKLAKSLPCH 1413
            GPRF+DWWGTG+LPVD DLLP +IPGYKTP R+LP GMRPRLTNAEMTNLRKLAKSLPCH
Sbjct: 371  GPRFVDWWGTGVLPVDGDLLPQSIPGYKTPLRILPTGMRPRLTNAEMTNLRKLAKSLPCH 430

Query: 1414 FALGRNRNHQGLAAAIVKLWDKSLVVKIAVKRGIQNTNNKLMAEELKNLTGGILLLRNKY 1593
            FALGRNRNHQGLAAAI+KLW+KS+VVKIAVK GIQNTNNKLMAEE+KNLTGG+LLLRNKY
Sbjct: 431  FALGRNRNHQGLAAAIIKLWEKSIVVKIAVKPGIQNTNNKLMAEEIKNLTGGVLLLRNKY 490

Query: 1594 YIVIYRGKDFLPTSVAATLAERQELTKEIQDVEEKVRSGGVGFAPTNRFE-GKALAGTLA 1770
            YIVIYRGKDFLPTSVAA L+ER+ELTK IQ VEEKVR+GG    P+     G+ LAGTLA
Sbjct: 491  YIVIYRGKDFLPTSVAAALSEREELTKHIQVVEEKVRTGGAEAIPSGEDGVGQPLAGTLA 550

Query: 1771 EFHEAQARWGREISVEEHEKMKEEASKAKNARIVKRIEHKLAIAQAKTLRAERLLAKIEV 1950
            EF+EAQARWGREIS EEHEKM EEAS+AK+AR+VKRIEHKLA+AQAK LR ERLLAKIE 
Sbjct: 551  EFYEAQARWGREISAEEHEKMIEEASRAKSARVVKRIEHKLALAQAKKLRPERLLAKIEA 610

Query: 1951 SMVPAGPSDDQETITDEERFMFRRIGLRMKAYLPIGIRGVFDGVIENMHLHWKHRELVKL 2130
            SM+PAGPSDDQETITDEERFMFRR+GLRMKAYL +G+RGVFDGVIENMHLHWKHRELVKL
Sbjct: 611  SMIPAGPSDDQETITDEERFMFRRLGLRMKAYLLLGVRGVFDGVIENMHLHWKHRELVKL 670

Query: 2131 ISKQKTLSFVEDTARLLEYESGGILVAVEKVPKGYALIYYRGKNYQRPISIRPRNLLTKA 2310
            ISKQKTL+FVEDTARLLEYESGGILVA+E+VPKGYALIYYRGKNY+RP+S+RPRNLLTKA
Sbjct: 671  ISKQKTLAFVEDTARLLEYESGGILVAIERVPKGYALIYYRGKNYRRPVSLRPRNLLTKA 730

Query: 2311 KALKRSVAMQRHEALSQHISELESAIEQMKTEIAE 2415
            KALKRSVAMQRHEALSQHISELE  IEQMK EI +
Sbjct: 731  KALKRSVAMQRHEALSQHISELERTIEQMKMEIGD 765


>ref|XP_007211308.1| hypothetical protein PRUPE_ppa001468mg [Prunus persica]
            gi|462407043|gb|EMJ12507.1| hypothetical protein
            PRUPE_ppa001468mg [Prunus persica]
          Length = 820

 Score =  951 bits (2457), Expect = 0.0
 Identities = 511/782 (65%), Positives = 582/782 (74%), Gaps = 13/782 (1%)
 Frame = +1

Query: 103  MAFCTAKLTEVPLHNSIPLRXXXXXXXXXXXXXXXXXXXXXXXKPFSTSTSSLRSTEHIX 282
            MAF TAK++E+PL +S+PL                        KPFS    SL++TEH  
Sbjct: 1    MAFTTAKISEMPLRSSLPLTSHSSSSLNFLFSASKPSFRLL--KPFS----SLKATEHSG 54

Query: 283  XXXXXXXXXXXXXXXVTSAPWLNKWSSVNSSLDTDKRQKVEDDRAES------------R 426
                             SAPWLN W   NS  +    QKV +   ES            R
Sbjct: 55   NPNAKPSHKSKPP----SAPWLNTWPPRNSPAELPC-QKVNEKVNESHGRDQAVKANTTR 109

Query: 427  YFDGDKGRGAIERIVYRLRNLGLESXXXXXXXXXXXXXXXXXXXMPCNGEEKLGELLQRK 606
            YFD +KG+ AIERIV RLRNLGL S                      +GEEKLG+LLQR+
Sbjct: 110  YFDKNKGQSAIERIVLRLRNLGLGSDDEEEDDGLGLDGQDSMQPAE-SGEEKLGDLLQRE 168

Query: 607  WSRPDSIIVDEDEDEGGLLPWXXXXXXXXXXXXXXXGLKKKRVKAPTLAELTIEDVXXXX 786
            W RPD ++ ++  ++   LPW               GL+K+RVKAP+LAELTIED     
Sbjct: 169  WVRPDYVLAEQKSNDEVALPWEKEDEISEEEEVK--GLRKRRVKAPSLAELTIEDEELKR 226

Query: 787  XXXXXXXXXXXINIPKAGITQVILETIHDKWRKSELVRLKFHETLATDMKTAHEIVERRT 966
                       I++PKAGITQ +LE IHD WRK ELVRLKFHE LA DMKTAHEIVERRT
Sbjct: 227  LRRMGMVLRERISVPKAGITQAVLEKIHDTWRKEELVRLKFHEVLALDMKTAHEIVERRT 286

Query: 967  GGLVIWRSGSVMVVYRGTNYERPSLRSQSVLREGDTLFVPSISSADHLIAKNGNDAISIP 1146
            GGLV+WRSGSVMVVYRG+NY+ PS +SQ+V REG  LF+P +SSA+    ++GNDA S P
Sbjct: 287  GGLVLWRSGSVMVVYRGSNYKGPS-KSQTVDREGGALFIPDVSSAETSATRSGNDATSGP 345

Query: 1147 EKSEPYFMSPDS-ERMTQEEAEYNSLLDGLGPRFIDWWGTGLLPVDADLLPSTIPGYKTP 1323
            + +E     P     MT+EEAE+NSLLD LGPRF++WWGTG+LPVDADLLP TIPGYKTP
Sbjct: 346  DNNEKAVKIPAHLPNMTEEEAEFNSLLDDLGPRFVEWWGTGVLPVDADLLPKTIPGYKTP 405

Query: 1324 FRLLPIGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIVKLWDKSLVVKIAV 1503
            FRLLP GMR RLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLA+AI+KLW+KS V KIAV
Sbjct: 406  FRLLPTGMRSRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLASAIIKLWEKSSVAKIAV 465

Query: 1504 KRGIQNTNNKLMAEELKNLTGGILLLRNKYYIVIYRGKDFLPTSVAATLAERQELTKEIQ 1683
            KRGIQNTNNKLMAEELK LTGG+LLLRNKYYIV YRGKDFLPTSVAA LAERQELTK++Q
Sbjct: 466  KRGIQNTNNKLMAEELKTLTGGVLLLRNKYYIVFYRGKDFLPTSVAAALAERQELTKQVQ 525

Query: 1684 DVEEKVRSGGVGFAPTNRFEGKALAGTLAEFHEAQARWGREISVEEHEKMKEEASKAKNA 1863
            DVEEK+R   +  A +   EG+ALAGTLAEF+EAQARWGREIS EE EKM EE SKAKNA
Sbjct: 526  DVEEKMRIKAIDAASSGAEEGQALAGTLAEFYEAQARWGREISAEEREKMIEEDSKAKNA 585

Query: 1864 RIVKRIEHKLAIAQAKTLRAERLLAKIEVSMVPAGPSDDQETITDEERFMFRRIGLRMKA 2043
            R+VKRIEHKL +AQAK LRAE+LL+KIE SM+PAGP  DQET+TDEER MFRR+GLRMKA
Sbjct: 586  RLVKRIEHKLGVAQAKKLRAEKLLSKIESSMLPAGPDYDQETVTDEERVMFRRVGLRMKA 645

Query: 2044 YLPIGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFVEDTARLLEYESGGILVAVEKV 2223
            YLP+GIRGVFDGV+ENMHLHWKHRELVKLISKQKTL+FVEDTARLLE+ESGGILVA+E+V
Sbjct: 646  YLPLGIRGVFDGVVENMHLHWKHRELVKLISKQKTLAFVEDTARLLEFESGGILVAIERV 705

Query: 2224 PKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELESAIEQMKT 2403
            PKGYALIYYRGKNYQRPI++RPRNLLTKAKALKRSVA+QRHEALSQHISELE  IEQM +
Sbjct: 706  PKGYALIYYRGKNYQRPITLRPRNLLTKAKALKRSVAIQRHEALSQHISELEKTIEQMSS 765

Query: 2404 EI 2409
            EI
Sbjct: 766  EI 767


>ref|XP_004300521.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 820

 Score =  937 bits (2421), Expect = 0.0
 Identities = 504/783 (64%), Positives = 576/783 (73%), Gaps = 14/783 (1%)
 Frame = +1

Query: 103  MAFCTAKLTEVPLHNSIPLRXXXXXXXXXXXXXXXXXXXXXXXKPFSTSTSSLRSTEHIX 282
            MAF TAK++E+PL NS+PL                        KPFS    +LR+TEH  
Sbjct: 1    MAFATAKISEMPLRNSLPLTSHSPSSLHLLLKPSFRIL-----KPFS----ALRTTEH-- 49

Query: 283  XXXXXXXXXXXXXXXVTSAPWLNKWSSVNSSLDTDKRQKVEDDRAES-----------RY 429
                            ++APWLNKW S   +     RQK  D   ES           RY
Sbjct: 50   GGNPNARHKSKPSSSSSTAPWLNKWPSRGQAPAEPPRQKFSDRVKESDGREKPSSNAARY 109

Query: 430  FDGDKGRGAIERIVYRLRNLGLESXXXXXXXXXXXXXXXXXXXMPC-NGEEKLGELLQRK 606
             D DKG+ AIERIV+RLRNLGL                     MP  +G EKLG+LLQR+
Sbjct: 110  VDKDKGQSAIERIVFRLRNLGLGDDEEEEESGDGVELDS----MPAASGAEKLGDLLQRE 165

Query: 607  WSRPDSIIVDEDEDEGGLLPWXXXXXXXXXXXXXXXGLKKKRVKAPTLAELTIEDVXXXX 786
            W RPD I+ +E  D+   LPW                 K +R KAP+LAELTIED     
Sbjct: 166  WVRPDYILAEEKGDDDVALPWEKEEEELSEDEEVKGMRKARRSKAPSLAELTIEDEELRR 225

Query: 787  XXXXXXXXXXXINIPKAGITQVILETIHDKWRKSELVRLKFHETLATDMKTAHEIVERRT 966
                       I++PKAGITQ +LE IHDKWRK ELVRLKFHE LA DMKTAHEIVERRT
Sbjct: 226  LRRLGMVLRERISVPKAGITQAVLEKIHDKWRKEELVRLKFHEVLAHDMKTAHEIVERRT 285

Query: 967  GGLVIWRSGSVMVVYRGTNYERPSLRSQSVLREGDTLFVPSISSADHLIAKNGNDAISIP 1146
            GGLV+WRSGSVMVVYRG+NY+ PS +S+   R GD LF+P +SSA+  + + GNDA S P
Sbjct: 286  GGLVLWRSGSVMVVYRGSNYKGPS-KSEPAGRGGDALFIPDVSSAETSVTRGGNDATSAP 344

Query: 1147 EKSEPYFMSPDS--ERMTQEEAEYNSLLDGLGPRFIDWWGTGLLPVDADLLPSTIPGYKT 1320
            +K+E     P+   ++MT EEAE+NSLLD LGPRF+++WGTG+LPVDADLLP TIPGYKT
Sbjct: 345  DKTEQAVKIPEPLPKKMTDEEAEFNSLLDELGPRFVEYWGTGILPVDADLLPKTIPGYKT 404

Query: 1321 PFRLLPIGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIVKLWDKSLVVKIA 1500
            PFRLLP GMR RLTNAEMTNLRKLAKS+PCHFALGRNRNHQGLA+AI+K+W+KS V KIA
Sbjct: 405  PFRLLPTGMRSRLTNAEMTNLRKLAKSIPCHFALGRNRNHQGLASAILKVWEKSSVAKIA 464

Query: 1501 VKRGIQNTNNKLMAEELKNLTGGILLLRNKYYIVIYRGKDFLPTSVAATLAERQELTKEI 1680
            VKRGIQNTNNK+MAEELK LTGG+LLLRNKYYIVIYRGKDF+PT+VA  LAERQELTK++
Sbjct: 465  VKRGIQNTNNKIMAEELKALTGGVLLLRNKYYIVIYRGKDFVPTTVATALAERQELTKQV 524

Query: 1681 QDVEEKVRSGGVGFAPTNRFEGKALAGTLAEFHEAQARWGREISVEEHEKMKEEASKAKN 1860
            QDVEE VR   +  A ++  EG+ALAGTLAEF+EAQARWGREIS EE +KM EE SKAK 
Sbjct: 525  QDVEEIVRIKPIDAAASSTEEGQALAGTLAEFYEAQARWGREISAEERKKMIEEDSKAKM 584

Query: 1861 ARIVKRIEHKLAIAQAKTLRAERLLAKIEVSMVPAGPSDDQETITDEERFMFRRIGLRMK 2040
            AR  KRIEHKL +AQAK LRAE LL KIE +M+PAGP  DQETITDEER MFRR+GLRMK
Sbjct: 585  ARRAKRIEHKLGVAQAKKLRAESLLNKIESAMLPAGPDYDQETITDEERVMFRRVGLRMK 644

Query: 2041 AYLPIGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFVEDTARLLEYESGGILVAVEK 2220
            AYLP+GIRGVFDGVIENMHLHWKHRELVKLISKQKTL+FVED+ARLLEYESGGILVA+E+
Sbjct: 645  AYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDSARLLEYESGGILVAIER 704

Query: 2221 VPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELESAIEQMK 2400
            VPKGYALIYYRGKNYQRPI++RPRNLLTKAKALKRSVAMQRHEALSQHI ELE  IEQM+
Sbjct: 705  VPKGYALIYYRGKNYQRPITLRPRNLLTKAKALKRSVAMQRHEALSQHIEELERTIEQMR 764

Query: 2401 TEI 2409
            +EI
Sbjct: 765  SEI 767


>gb|EXB56911.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
            notabilis]
          Length = 838

 Score =  926 bits (2394), Expect = 0.0
 Identities = 484/706 (68%), Positives = 553/706 (78%), Gaps = 14/706 (1%)
 Frame = +1

Query: 334  SAPWLNKWSSVNSSLDTDKRQKVEDDRAESR----YFDGDKGRGAIERIVYRLRNLGLES 501
            SAPWLNKW  V SS D    +  + DR +      Y D D+GR AIERIV RLRNLGL S
Sbjct: 81   SAPWLNKWPPVESS-DRKVAESTDRDRTDRPDTVGYVDRDRGRNAIERIVLRLRNLGLGS 139

Query: 502  XXXXXXXXXXXXXXXXXXXMPCNGEEKLGELLQRKWSRPDSIIVDEDEDEGGLLPWXXXX 681
                               MP  GEEKLG+LL+R+W RPD ++ +E+  +   LPW    
Sbjct: 140  DDEDEDDKEGDIGLDGQDAMPVTGEEKLGDLLRREWIRPDFVLEEEESKDDLTLPWEREE 199

Query: 682  XXXXXXXXXXXGLKKKRVKAPTLAELTIEDVXXXXXXXXXXXXXXXINIPKAGITQVILE 861
                        L+K+RV APTLAELTIED                I++PKAG+TQ +LE
Sbjct: 200  EEKGVDEGTRE-LRKRRVNAPTLAELTIEDEELRRLRRMGMFLRDRISVPKAGLTQAVLE 258

Query: 862  TIHDKWRKSELVRLKFHETLATDMKTAHEIVERRTGGLVIWRSGSVMVVYRGTNYERPSL 1041
             IHDKWRK ELVRLKFHE LA DMKTAHEIVERRTGGLV WRSGSVMVVYRG+NYE P  
Sbjct: 259  KIHDKWRKEELVRLKFHEVLAHDMKTAHEIVERRTGGLVTWRSGSVMVVYRGSNYEGPP- 317

Query: 1042 RSQSVLREGDTLFVPSISSADHLIAKNGNDAISIPEKSEPYFMSPDS-ERMTQEEAEYNS 1218
            ++Q V +E D LF+P +SSA++ + ++G+   S  EKSE    +P S + MT+EEAE+NS
Sbjct: 318  KTQPVNKERDALFIPDVSSAENFLTRSGDSLTSNAEKSETPVRNPVSVQNMTEEEAEFNS 377

Query: 1219 LLDGLGPRFIDWWGTGLLPVDADLLPSTIPGYKTPFRLLPIGMRPRLTNAEMTNLRKLAK 1398
            LLD LGPRF +WWGTG++PVDADLLP  IPGYKTPFRLLP GMR RLTN EMTNLRK+AK
Sbjct: 378  LLDDLGPRFDEWWGTGVIPVDADLLPPKIPGYKTPFRLLPTGMRSRLTNGEMTNLRKVAK 437

Query: 1399 SLPCHFALGRNRNHQGLAAAIVKLWDKSLVVKIAVKRGIQNTNNKLMAEELKNLTGGILL 1578
            SLP HFALGRNRNHQGLAAAI+KLW+KSLV KIAVKRGIQNTNNKLMAEELKNLTGG+LL
Sbjct: 438  SLPSHFALGRNRNHQGLAAAIIKLWEKSLVAKIAVKRGIQNTNNKLMAEELKNLTGGVLL 497

Query: 1579 LRNKYYIVIYRGKDFLPTSVAATLAERQELTKEIQDVEEKVR---------SGGVGFAPT 1731
            LRNKYYIVIYRGKDFLPT+VAATLAERQ+L K++QD+EE+VR            V   P+
Sbjct: 498  LRNKYYIVIYRGKDFLPTTVAATLAERQKLAKQVQDLEEQVRVQDIEQKMQKKAVDSVPS 557

Query: 1732 NRFEGKALAGTLAEFHEAQARWGREISVEEHEKMKEEASKAKNARIVKRIEHKLAIAQAK 1911
               EG+ALAGTLAEF+EAQARWGREI+ EE EKM EEA+ AK+AR+VKRIEHK A+AQAK
Sbjct: 558  GEEEGQALAGTLAEFYEAQARWGREITSEEREKMIEEAAVAKHARLVKRIEHKAAVAQAK 617

Query: 1912 TLRAERLLAKIEVSMVPAGPSDDQETITDEERFMFRRIGLRMKAYLPIGIRGVFDGVIEN 2091
             LRAE+LLAKIE SMVPAGP  DQETIT+EER MFRR+GLRMKAYLP+GIRGVFDGVIEN
Sbjct: 618  KLRAEKLLAKIEASMVPAGPDYDQETITEEERVMFRRVGLRMKAYLPLGIRGVFDGVIEN 677

Query: 2092 MHLHWKHRELVKLISKQKTLSFVEDTARLLEYESGGILVAVEKVPKGYALIYYRGKNYQR 2271
            MHLHWKHRELVKLI+KQKTL+FVEDTARLLEYESGGILVA+E+VPKG+ALIYYRGKNY+R
Sbjct: 678  MHLHWKHRELVKLITKQKTLAFVEDTARLLEYESGGILVAIERVPKGFALIYYRGKNYRR 737

Query: 2272 PISIRPRNLLTKAKALKRSVAMQRHEALSQHISELESAIEQMKTEI 2409
            PIS+RPRNLLTKAKALKRSVAMQRHEALSQHISELE+ IEQM+ +I
Sbjct: 738  PISLRPRNLLTKAKALKRSVAMQRHEALSQHISELETTIEQMQDKI 783


>ref|XP_002317913.2| hypothetical protein POPTR_0012s05260g [Populus trichocarpa]
            gi|550326426|gb|EEE96133.2| hypothetical protein
            POPTR_0012s05260g [Populus trichocarpa]
          Length = 807

 Score =  918 bits (2373), Expect = 0.0
 Identities = 494/774 (63%), Positives = 565/774 (72%), Gaps = 5/774 (0%)
 Frame = +1

Query: 103  MAFCTAKLTEVPLHNSIPLRXXXXXXXXXXXXXXXXXXXXXXXKPFSTSTSSLRSTEHIX 282
            M F TAKLTE+PL  +  L                        KPFST+TSS   T    
Sbjct: 2    MTFTTAKLTELPLRTTSTL------PLSSHSLLSKIATFQSLKKPFSTATSSSLRTNKTP 55

Query: 283  XXXXXXXXXXXXXXXVTSAPWLNKWS-SVNSSLDTDKRQKVEDDRAESRYFDGDKGRGAI 459
                             +  W++KW  S N S+   K    E  + +  YF  DKG+ AI
Sbjct: 56   KTQQK------------NPNWISKWKPSQNHSI---KNPPSEVSQEKPHYFSNDKGQNAI 100

Query: 460  ERIVYRLRNLGLESXXXXXXXXXXXXXXXXXXXMPCNGEEKLGELLQRKWSRPDSIIVDE 639
            ERIV RLRNLGL S                       GEE+LG+LL+R+W RPD+++   
Sbjct: 101  ERIVLRLRNLGLGSDDEDELEGLEGSEINGGGL---TGEERLGDLLKREWVRPDTVVFSN 157

Query: 640  DE---DEGGLLPWXXXXXXXXXXXXXXXGLKKKRVKAPTLAELTIEDVXXXXXXXXXXXX 810
            DE    +  +LPW                 +K+R KAPTLAELTIED             
Sbjct: 158  DEGSDSDESVLPWEREERGAVEMEGGIESGRKRRGKAPTLAELTIEDEELRRLRRMGMFI 217

Query: 811  XXXINIPKAGITQVILETIHDKWRKSELVRLKFHETLATDMKTAHEIVERRTGGLVIWRS 990
               I+IPKAGIT  +LE IHD+WRK ELVRLKFHE LA DMKTAHEIVERRTGGLVIWR+
Sbjct: 218  RERISIPKAGITNAVLENIHDRWRKEELVRLKFHEVLAHDMKTAHEIVERRTGGLVIWRA 277

Query: 991  GSVMVVYRGTNYERPSLRSQSVLREGDTLFVPSISSADHLIAKNGNDAISIPEKSEPYF- 1167
            GSVMVV+RGTNY+ P  + Q   REGD LFVP +SS D ++ ++ N A S  EKS+    
Sbjct: 278  GSVMVVFRGTNYQGPPSKLQPADREGDALFVPDVSSTDSVMTRSSNIATSSSEKSKLVMR 337

Query: 1168 MSPDSERMTQEEAEYNSLLDGLGPRFIDWWGTGLLPVDADLLPSTIPGYKTPFRLLPIGM 1347
            ++  +E MT+EEAE NSLLD LGPRF +WWGTGLLPVDADLLP  +P YKTPFRLLP+GM
Sbjct: 338  ITEPTENMTEEEAELNSLLDDLGPRFEEWWGTGLLPVDADLLPPKVPCYKTPFRLLPVGM 397

Query: 1348 RPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIVKLWDKSLVVKIAVKRGIQNTN 1527
            R RLTNAEMTN+RKLAK+LPCHFALGRNRNHQGLA AI+KLW+KSLV KIAVKRGIQNTN
Sbjct: 398  RARLTNAEMTNMRKLAKALPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTN 457

Query: 1528 NKLMAEELKNLTGGILLLRNKYYIVIYRGKDFLPTSVAATLAERQELTKEIQDVEEKVRS 1707
            NKLMA+ELK LTGG+LLLRNKYYIVI+RGKDFLP SVAA LAERQE+TK+IQDVEE+VRS
Sbjct: 458  NKLMADELKMLTGGVLLLRNKYYIVIFRGKDFLPQSVAAALAERQEVTKQIQDVEERVRS 517

Query: 1708 GGVGFAPTNRFEGKALAGTLAEFHEAQARWGREISVEEHEKMKEEASKAKNARIVKRIEH 1887
              V  AP+   EGKALAGTLAEF+EAQARWGR+IS EE EKM EEASKAK AR+VKR EH
Sbjct: 518  NSVEAAPSGEDEGKALAGTLAEFYEAQARWGRDISTEEREKMIEEASKAKTARLVKRTEH 577

Query: 1888 KLAIAQAKTLRAERLLAKIEVSMVPAGPSDDQETITDEERFMFRRIGLRMKAYLPIGIRG 2067
            KLAIAQAK LRAE LL+KIE +MVP+GP  DQETI++EER MFRR+GLRMKAYLP+GIRG
Sbjct: 578  KLAIAQAKKLRAESLLSKIETTMVPSGPDFDQETISEEERVMFRRVGLRMKAYLPLGIRG 637

Query: 2068 VFDGVIENMHLHWKHRELVKLISKQKTLSFVEDTARLLEYESGGILVAVEKVPKGYALIY 2247
            VFDGVIENMHLHWKHRELVKLISKQKTL+FVEDTA+LLEYESGG+LVA+E+VPKG+ALIY
Sbjct: 638  VFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTAKLLEYESGGVLVAIERVPKGFALIY 697

Query: 2248 YRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELESAIEQMKTEI 2409
            YRGKNY+RPISIRPRNLLTKAKALKRSVAMQRHEALSQHI ELE  IE+M  E+
Sbjct: 698  YRGKNYRRPISIRPRNLLTKAKALKRSVAMQRHEALSQHIFELEKNIEEMVKEM 751


>ref|XP_006440981.1| hypothetical protein CICLE_v10018859mg [Citrus clementina]
            gi|557543243|gb|ESR54221.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
          Length = 806

 Score =  891 bits (2303), Expect = 0.0
 Identities = 484/785 (61%), Positives = 570/785 (72%), Gaps = 16/785 (2%)
 Frame = +1

Query: 103  MAFCTAKLTEVPLHNSIPL--RXXXXXXXXXXXXXXXXXXXXXXXKPFSTSTSSLRSTEH 276
            MA  T+KLTE+P  NS+ L                          KPFS    SLR+ ++
Sbjct: 1    MALTTSKLTELPFRNSLTLTSHSTPSLNHLPFSSSSRKTPSFQLLKPFS----SLRTNQN 56

Query: 277  IXXXXXXXXXXXXXXXXVTSAPWLNKWS-----SVNSSLDTDKRQKVEDDRAES----RY 429
                              TSAPWLN WS     S  ++     R ++++ +       RY
Sbjct: 57   -PRTDSQNQQFPKPRSPSTSAPWLNNWSRPKPPSTENANKLGGRNQIDEKQTSPDSYPRY 115

Query: 430  FDGD-KGRGAIERIVYRLRNLGLESXXXXXXXXXXXXXXXXXXXMPCNGEEKLGELLQRK 606
             D D KGR AIERIV RLRNLGL S                       GEE+L +LL+R+
Sbjct: 116  SDSDNKGRNAIERIVLRLRNLGLGSDDEEEGEEEEDDINDA-----ATGEERLEDLLRRE 170

Query: 607  WSRPDSIIVD-EDEDEGGLLPWXXXXXXXXXXXXXXXG--LKKKRVKAPTLAELTIEDVX 777
            W RP++++ + E E++  LLPW                   +++R+KAPTLAELTIED  
Sbjct: 171  WVRPNTVLREVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEE 230

Query: 778  XXXXXXXXXXXXXXINIPKAGITQVILETIHDKWRKSELVRLKFHETLATDMKTAHEIVE 957
                          IN+PKAG+TQ ++  IHDKWRK ELVRLKFHE LATDMKTAHEIVE
Sbjct: 231  LRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVE 290

Query: 958  RRTGGLVIWRSGSVMVVYRGTNYERPSLRSQSVLREGDTLFVPSISSADHLIAKNGNDAI 1137
            RRTGGLVIWR+GSVMVVYRG+NY  PS + Q +  +GDTLFVP +SS D      G+ A 
Sbjct: 291  RRTGGLVIWRAGSVMVVYRGSNYAGPSSKPQPIDGDGDTLFVPHVSSTD------GSTAR 344

Query: 1138 SIPEKSE-PYFMSPDSERMTQEEAEYNSLLDGLGPRFIDWWGTGLLPVDADLLPSTIPGY 1314
            S+ EKSE P  +   S+ MT+EEAE NSLLD LGPRF +WWGTG+LPVDADLLP  + GY
Sbjct: 345  SVDEKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGY 404

Query: 1315 KTPFRLLPIGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIVKLWDKSLVVK 1494
            KTPFRLLP GMR RLTNAEMT+LR+LA+SLPCHFALGRNRNHQGLA AI+KLW+KSLV K
Sbjct: 405  KTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAK 464

Query: 1495 IAVKRGIQNTNNKLMAEELKNLTGGILLLRNKYYIVIYRGKDFLPTSVAATLAERQELTK 1674
            IAVKRGIQNTNNKLMAEELK+LTGG LL RNK+YIV+YRGKDFLP +VA+ LAER++  K
Sbjct: 465  IAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAK 524

Query: 1675 EIQDVEEKVRSGGVGFAPTNRFEGKALAGTLAEFHEAQARWGREISVEEHEKMKEEASKA 1854
            +IQDVEEKVRS  +   P+   EG+A AGTLAEF+EAQ RWGRE+S EE EKM EEASKA
Sbjct: 525  QIQDVEEKVRSKTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKA 584

Query: 1855 KNARIVKRIEHKLAIAQAKTLRAERLLAKIEVSMVPAGPSDDQETITDEERFMFRRIGLR 2034
            K+ R+VKRIEHKLA++QAK LRAERLLAKIE SMVP+GP  DQETITDEER MFRR+GLR
Sbjct: 585  KHGRLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLR 644

Query: 2035 MKAYLPIGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFVEDTARLLEYESGGILVAV 2214
            MKA+LP+GIRGVFDGV+ENMHLHWK+RELVKLI+KQKTL++VEDTARLLEYES GIL+A+
Sbjct: 645  MKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESVGILIAI 704

Query: 2215 EKVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELESAIEQ 2394
            E+VPKG+ALI+YRGKNY+RPIS+RPRNLLTKAKALKRSVAMQRHEALSQHIS+LE+ IEQ
Sbjct: 705  ERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQ 764

Query: 2395 MKTEI 2409
            MK EI
Sbjct: 765  MKKEI 769


>ref|XP_006440978.1| hypothetical protein CICLE_v10018859mg [Citrus clementina]
            gi|567896982|ref|XP_006440979.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
            gi|567896984|ref|XP_006440980.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
            gi|557543240|gb|ESR54218.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
            gi|557543241|gb|ESR54219.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
            gi|557543242|gb|ESR54220.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
          Length = 833

 Score =  891 bits (2303), Expect = 0.0
 Identities = 484/785 (61%), Positives = 570/785 (72%), Gaps = 16/785 (2%)
 Frame = +1

Query: 103  MAFCTAKLTEVPLHNSIPL--RXXXXXXXXXXXXXXXXXXXXXXXKPFSTSTSSLRSTEH 276
            MA  T+KLTE+P  NS+ L                          KPFS    SLR+ ++
Sbjct: 1    MALTTSKLTELPFRNSLTLTSHSTPSLNHLPFSSSSRKTPSFQLLKPFS----SLRTNQN 56

Query: 277  IXXXXXXXXXXXXXXXXVTSAPWLNKWS-----SVNSSLDTDKRQKVEDDRAES----RY 429
                              TSAPWLN WS     S  ++     R ++++ +       RY
Sbjct: 57   -PRTDSQNQQFPKPRSPSTSAPWLNNWSRPKPPSTENANKLGGRNQIDEKQTSPDSYPRY 115

Query: 430  FDGD-KGRGAIERIVYRLRNLGLESXXXXXXXXXXXXXXXXXXXMPCNGEEKLGELLQRK 606
             D D KGR AIERIV RLRNLGL S                       GEE+L +LL+R+
Sbjct: 116  SDSDNKGRNAIERIVLRLRNLGLGSDDEEEGEEEEDDINDA-----ATGEERLEDLLRRE 170

Query: 607  WSRPDSIIVD-EDEDEGGLLPWXXXXXXXXXXXXXXXG--LKKKRVKAPTLAELTIEDVX 777
            W RP++++ + E E++  LLPW                   +++R+KAPTLAELTIED  
Sbjct: 171  WVRPNTVLREVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEE 230

Query: 778  XXXXXXXXXXXXXXINIPKAGITQVILETIHDKWRKSELVRLKFHETLATDMKTAHEIVE 957
                          IN+PKAG+TQ ++  IHDKWRK ELVRLKFHE LATDMKTAHEIVE
Sbjct: 231  LRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVE 290

Query: 958  RRTGGLVIWRSGSVMVVYRGTNYERPSLRSQSVLREGDTLFVPSISSADHLIAKNGNDAI 1137
            RRTGGLVIWR+GSVMVVYRG+NY  PS + Q +  +GDTLFVP +SS D      G+ A 
Sbjct: 291  RRTGGLVIWRAGSVMVVYRGSNYAGPSSKPQPIDGDGDTLFVPHVSSTD------GSTAR 344

Query: 1138 SIPEKSE-PYFMSPDSERMTQEEAEYNSLLDGLGPRFIDWWGTGLLPVDADLLPSTIPGY 1314
            S+ EKSE P  +   S+ MT+EEAE NSLLD LGPRF +WWGTG+LPVDADLLP  + GY
Sbjct: 345  SVDEKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGY 404

Query: 1315 KTPFRLLPIGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIVKLWDKSLVVK 1494
            KTPFRLLP GMR RLTNAEMT+LR+LA+SLPCHFALGRNRNHQGLA AI+KLW+KSLV K
Sbjct: 405  KTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAK 464

Query: 1495 IAVKRGIQNTNNKLMAEELKNLTGGILLLRNKYYIVIYRGKDFLPTSVAATLAERQELTK 1674
            IAVKRGIQNTNNKLMAEELK+LTGG LL RNK+YIV+YRGKDFLP +VA+ LAER++  K
Sbjct: 465  IAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAK 524

Query: 1675 EIQDVEEKVRSGGVGFAPTNRFEGKALAGTLAEFHEAQARWGREISVEEHEKMKEEASKA 1854
            +IQDVEEKVRS  +   P+   EG+A AGTLAEF+EAQ RWGRE+S EE EKM EEASKA
Sbjct: 525  QIQDVEEKVRSKTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKA 584

Query: 1855 KNARIVKRIEHKLAIAQAKTLRAERLLAKIEVSMVPAGPSDDQETITDEERFMFRRIGLR 2034
            K+ R+VKRIEHKLA++QAK LRAERLLAKIE SMVP+GP  DQETITDEER MFRR+GLR
Sbjct: 585  KHGRLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLR 644

Query: 2035 MKAYLPIGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFVEDTARLLEYESGGILVAV 2214
            MKA+LP+GIRGVFDGV+ENMHLHWK+RELVKLI+KQKTL++VEDTARLLEYES GIL+A+
Sbjct: 645  MKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESVGILIAI 704

Query: 2215 EKVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELESAIEQ 2394
            E+VPKG+ALI+YRGKNY+RPIS+RPRNLLTKAKALKRSVAMQRHEALSQHIS+LE+ IEQ
Sbjct: 705  ERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQ 764

Query: 2395 MKTEI 2409
            MK EI
Sbjct: 765  MKKEI 769


>ref|XP_006485796.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Citrus sinensis]
          Length = 837

 Score =  890 bits (2300), Expect = 0.0
 Identities = 486/789 (61%), Positives = 573/789 (72%), Gaps = 20/789 (2%)
 Frame = +1

Query: 103  MAFCTAKLTEVPLHNSIPL--RXXXXXXXXXXXXXXXXXXXXXXXKPFSTSTSSLRSTEH 276
            MA  T+KLTE+P  NS+ L                          KPFS    SLR+ ++
Sbjct: 1    MALTTSKLTELPFRNSLTLTSHSTPSLNHLLFSSSSRKTPSFQLLKPFS----SLRTNQN 56

Query: 277  IXXXXXXXXXXXXXXXXVTSAPWLNKWS-----SVNSSLDTDKRQKVEDDRAES----RY 429
                              TSAPWLN WS     S  +   +D R ++++ +       RY
Sbjct: 57   -PRTDSQNQKFPKPRFPSTSAPWLNNWSRPKPPSTENVNKSDGRNQIDEKQTAPDSYPRY 115

Query: 430  FDGD-KGRGAIERIVYRLRNLGLESXXXXXXXXXXXXXXXXXXXMPCNGEEKLGELLQRK 606
             D D KGR AIERIV RLRNLGL S                       GEE+L +LL+R+
Sbjct: 116  SDSDNKGRNAIERIVLRLRNLGLGSDDEEEGEEEEDDINGA-----ATGEERLEDLLRRE 170

Query: 607  WSRPDSIIVD-EDEDEGGLLPWXXXXXXXXXXXXXXXG--LKKKRVKAPTLAELTIEDVX 777
            W RP++++ + E E++  LLPW                   +++R+KAPTLAELTIED  
Sbjct: 171  WVRPNTVLREVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEE 230

Query: 778  XXXXXXXXXXXXXXINIPKAGITQVILETIHDKWRKSELVRLKFHETLATDMKTAHEIVE 957
                          IN+PKAG+TQ ++  IHDKWRK ELVRLKFHE LATDMKTAHEIVE
Sbjct: 231  LRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVE 290

Query: 958  RRTGGLVIWRSGSVMVVYRGTNYERPSLRSQSVLREGD----TLFVPSISSADHLIAKNG 1125
            RRTGGLVIWR+GSVMVVY+G+NY  PS + Q +  +GD    TLFVP +SS D      G
Sbjct: 291  RRTGGLVIWRAGSVMVVYQGSNYAGPSSKPQPLDGDGDGDGDTLFVPHVSSTD------G 344

Query: 1126 NDAISIPEKSE-PYFMSPDSERMTQEEAEYNSLLDGLGPRFIDWWGTGLLPVDADLLPST 1302
            + A S+ EKSE P  +   S+ MT+EEAE NSLLD LGPRF +WWGTG+LPVDADLLP  
Sbjct: 345  STARSVDEKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPK 404

Query: 1303 IPGYKTPFRLLPIGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIVKLWDKS 1482
            + GYKTPFRLLP GMR RLTNAEMT+LR+LA+SLPCHFALGRNRNHQGLA AI+KLW+KS
Sbjct: 405  VDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKS 464

Query: 1483 LVVKIAVKRGIQNTNNKLMAEELKNLTGGILLLRNKYYIVIYRGKDFLPTSVAATLAERQ 1662
            LV KIAVKRGIQNTNNKLMAEELK+LTGG LL RNK+YIV+YRGKDFLP +VA+ LAER+
Sbjct: 465  LVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAERE 524

Query: 1663 ELTKEIQDVEEKVRSGGVGFAPTNRFEGKALAGTLAEFHEAQARWGREISVEEHEKMKEE 1842
            +  K+IQDVEEKVRS  +   P+   EG+A AGTLAEF+EAQ RWGRE+S EE EKM EE
Sbjct: 525  QCAKQIQDVEEKVRSKTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEE 584

Query: 1843 ASKAKNARIVKRIEHKLAIAQAKTLRAERLLAKIEVSMVPAGPSDDQETITDEERFMFRR 2022
            ASKAK+AR+VKRIEHKLA++QAK LRAERLLAKIE SMVP+GP  DQETITDEER MFRR
Sbjct: 585  ASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRR 644

Query: 2023 IGLRMKAYLPIGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFVEDTARLLEYESGGI 2202
            +GLRMKA+LP+GIRGVFDGV+ENMHLHWK+RELVKLI+KQKTL++VEDTARLLEYESGGI
Sbjct: 645  VGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGI 704

Query: 2203 LVAVEKVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELES 2382
            L+A+E+VPKG+ALI+YRGKNY+RPIS+RPRNLLTKAKALKRSVAMQRHEALSQHIS+LE+
Sbjct: 705  LIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLEN 764

Query: 2383 AIEQMKTEI 2409
             IEQMK EI
Sbjct: 765  TIEQMKKEI 773


>ref|XP_006842297.1| hypothetical protein AMTR_s00079p00107040 [Amborella trichopoda]
            gi|548844363|gb|ERN03972.1| hypothetical protein
            AMTR_s00079p00107040 [Amborella trichopoda]
          Length = 826

 Score =  884 bits (2283), Expect = 0.0
 Identities = 460/699 (65%), Positives = 528/699 (75%), Gaps = 10/699 (1%)
 Frame = +1

Query: 343  WLNKWSSVNSSLDTDKRQKVEDDRAESRYFDGDKGRGAIERIVYRLRNLGLESXXXXXXX 522
            WLNKW+  + S + + R   E+DR +  YFDGDKGR AI RIV RLRNLGL         
Sbjct: 69   WLNKWTQSDPSSNPNSRTSSEEDRVQ--YFDGDKGRSAIHRIVDRLRNLGLSDGDGDDDS 126

Query: 523  XXXXXXXXXXXXMPCNGEEKLGELLQRKWSRPDSIIVDEDEDEGGLLPWXXXXXXXXXXX 702
                        +    ++ LG LLQ+ W RPD + V+ D     LLPW           
Sbjct: 127  KDLPWGSREKGNLD---DKDLGFLLQKTWERPDQV-VNGDRISDALLPWERSEEGEYETK 182

Query: 703  XXXXGLKKKRVKAPTLAELTIEDVXXXXXXXXXXXXXXXINIPKAGITQVILETIHDKWR 882
                  K +R+KAPTLAELTIED                IN+PKAG+TQ +LE IH  WR
Sbjct: 183  KE----KSRRIKAPTLAELTIEDSELRRLRKLGITLRERINVPKAGVTQAVLEKIHMAWR 238

Query: 883  KSELVRLKFHETLATDMKTAHEIVERRTGGLVIWRSGSVMVVYRGTNY-ERPSLR----- 1044
            KSELVRLKFHETL  DMKTAHEIVERRTGGLVIW SGSVMVVYRG+ Y ++PS R     
Sbjct: 239  KSELVRLKFHETLVHDMKTAHEIVERRTGGLVIWMSGSVMVVYRGSTYGQQPSSRPNTSE 298

Query: 1045 ----SQSVLREGDTLFVPSISSADHLIAKNGNDAISIPEKSEPYFMSPDSERMTQEEAEY 1212
                + +++ EGDTLFVP ++ ++ +      ++I   EK    F   +   +T+EE EY
Sbjct: 299  EEVIATNLVHEGDTLFVPDVAHSEKIPESARKNSIITAEKPS-LFSVDEVPTLTEEEKEY 357

Query: 1213 NSLLDGLGPRFIDWWGTGLLPVDADLLPSTIPGYKTPFRLLPIGMRPRLTNAEMTNLRKL 1392
            NS+LDGLGPRF++WWGTG LPVDADLLP  +PGYK PFRLLPIGMR RLTNAEMTNLRK 
Sbjct: 358  NSILDGLGPRFVEWWGTGFLPVDADLLPQKVPGYKPPFRLLPIGMRSRLTNAEMTNLRKF 417

Query: 1393 AKSLPCHFALGRNRNHQGLAAAIVKLWDKSLVVKIAVKRGIQNTNNKLMAEELKNLTGGI 1572
            A+ LP HFALGRNRNHQG+AAAI+KLW++SL+VKIAVKRGIQNTNNKLMAEELK LTGGI
Sbjct: 418  ARKLPSHFALGRNRNHQGMAAAIIKLWERSLIVKIAVKRGIQNTNNKLMAEELKKLTGGI 477

Query: 1573 LLLRNKYYIVIYRGKDFLPTSVAATLAERQELTKEIQDVEEKVRSGGVGFAPTNRFEGKA 1752
            LLLRNKYYIVIYRGKDFLP SVA+ LAERQ LTK IQD EE+ R G +G A     + + 
Sbjct: 478  LLLRNKYYIVIYRGKDFLPPSVASALAERQALTKNIQDEEERARKGAIGAAEAELEKQEV 537

Query: 1753 LAGTLAEFHEAQARWGREISVEEHEKMKEEASKAKNARIVKRIEHKLAIAQAKTLRAERL 1932
            LAGTLAEF EAQARWGREI+ EE EKMKEE SKAK+A +V+RIEHK A+AQAK LRAE+ 
Sbjct: 538  LAGTLAEFKEAQARWGREIAAEEQEKMKEEISKAKHAGLVRRIEHKFAVAQAKKLRAEKQ 597

Query: 1933 LAKIEVSMVPAGPSDDQETITDEERFMFRRIGLRMKAYLPIGIRGVFDGVIENMHLHWKH 2112
            L+KIE SMVP GPSDDQET+TDEER+MFRR+GLRMKAYLP+GIRGVFDGVIENMHLHWKH
Sbjct: 598  LSKIEASMVPVGPSDDQETVTDEERYMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKH 657

Query: 2113 RELVKLISKQKTLSFVEDTARLLEYESGGILVAVEKVPKGYALIYYRGKNYQRPISIRPR 2292
            RELVKLISKQKTL+FVE+TARLLEYESGGIL+A+E+VPKGYALIYYRGKNYQRP++IRPR
Sbjct: 658  RELVKLISKQKTLAFVEETARLLEYESGGILIAIERVPKGYALIYYRGKNYQRPVTIRPR 717

Query: 2293 NLLTKAKALKRSVAMQRHEALSQHISELESAIEQMKTEI 2409
            NLLTKAKALKRSV MQRHEALSQHI ELE  IE MK E+
Sbjct: 718  NLLTKAKALKRSVEMQRHEALSQHILELERTIEHMKLEL 756


>ref|XP_002532154.1| conserved hypothetical protein [Ricinus communis]
            gi|223528164|gb|EEF30228.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 745

 Score =  880 bits (2275), Expect = 0.0
 Identities = 472/753 (62%), Positives = 548/753 (72%), Gaps = 5/753 (0%)
 Frame = +1

Query: 115  TAKLTEVPLHNSIPLRXXXXXXXXXXXXXXXXXXXXXXXKPFSTSTSSLRSTEHIXXXXX 294
            TA+LTE+PL NS+PL                        +PFS+S+SS  S+  +     
Sbjct: 7    TARLTELPLRNSLPL---------FSSKTPKKPSFHPLNRPFSSSSSSSSSSSSLGTNQN 57

Query: 295  XXXXXXXXXXXVTSAPWLNKWSSVNSSLDTDKRQKVEDDRAESRYFDGDKGRGAIERIVY 474
                          +PWL+KW+  +S   T K         + +    DKG+ AIERIV 
Sbjct: 58   PKPNNP-------KSPWLSKWAPHSSPPPTVKTSPKLAQDKKIQSLTKDKGQNAIERIVL 110

Query: 475  RLRNLGLESXXXXXXXXXXXXXXXXXXXMPCNGEEKLGELLQRKWSRPDSIIVDEDEDEG 654
            RLRNLGL S                   +   GEE+L +LLQR+W RPD+I + +DE++ 
Sbjct: 111  RLRNLGLGSDDEEEEGDMEYKPNGGDS-IAVTGEERLADLLQREWVRPDTIFIKDDEEDD 169

Query: 655  G---LLPWXXXXXXXXXXXXXXXGLKKKRV-KAPTLAELTIEDVXXXXXXXXXXXXXXXI 822
                +LPW                 +++RV KAPTLAELTIED                +
Sbjct: 170  NDDLVLPWERKEKVRREGEKEEGERERRRVVKAPTLAELTIEDEELRRLRRMGMFLRERV 229

Query: 823  NIPKAGITQVILETIHDKWRKSELVRLKFHETLATDMKTAHEIVERRTGGLVIWRSGSVM 1002
            N+PKAG+T+ ++E IHDKWRK+ELVRLKFHE LA DMKTAHEI ERRTGGLVIWR+GSVM
Sbjct: 230  NVPKAGLTKEVVEKIHDKWRKNELVRLKFHEVLAHDMKTAHEITERRTGGLVIWRAGSVM 289

Query: 1003 VVYRGTNYERPSLRSQSVLREGDTLFVPSISSADHLIAKNGNDAISIPEKSEPYFMSPD- 1179
            VVYRG++YE P  ++Q V REGD LF+P +SSA     K  N A S  EK E      D 
Sbjct: 290  VVYRGSSYEGPPSKTQPVNREGDALFIPDVSSAGSETMKGDNVAPSAAEKRELAMRRLDH 349

Query: 1180 SERMTQEEAEYNSLLDGLGPRFIDWWGTGLLPVDADLLPSTIPGYKTPFRLLPIGMRPRL 1359
            S+ MT+EE EY+S LD LGPRF +WWGTG+LPVDADLLP  IP YKTPFRLLP GMR RL
Sbjct: 350  SKDMTEEEIEYDSFLDSLGPRFEEWWGTGILPVDADLLPPKIPDYKTPFRLLPTGMRSRL 409

Query: 1360 TNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIVKLWDKSLVVKIAVKRGIQNTNNKLM 1539
            TNAEMTNLRKLAK LPCHFALGRNRNHQGLA+ I+K+W+KSLV KIAVKRGIQNTNNKLM
Sbjct: 410  TNAEMTNLRKLAKKLPCHFALGRNRNHQGLASTILKVWEKSLVAKIAVKRGIQNTNNKLM 469

Query: 1540 AEELKNLTGGILLLRNKYYIVIYRGKDFLPTSVAATLAERQELTKEIQDVEEKVRSGGVG 1719
            A+ELK LTGG+LLLRNKYYIVIYRGKDFLPTSVAA L ERQELTK+IQDVEEKVRS  + 
Sbjct: 470  ADELKMLTGGVLLLRNKYYIVIYRGKDFLPTSVAAALTERQELTKKIQDVEEKVRSREIE 529

Query: 1720 FAPTNRFEGKALAGTLAEFHEAQARWGREISVEEHEKMKEEASKAKNARIVKRIEHKLAI 1899
              P+   EGK LAGTLAEF+EAQ+RWG++ S E+ EKM E+ ++AK ARIVKRIEHKLA+
Sbjct: 530  AVPSKEEEGKPLAGTLAEFYEAQSRWGKDTSAEDREKMIEDDTRAKRARIVKRIEHKLAV 589

Query: 1900 AQAKTLRAERLLAKIEVSMVPAGPSDDQETITDEERFMFRRIGLRMKAYLPIGIRGVFDG 2079
            AQAK LRAERLLAKIEVSM+P+GP  DQETITDEER +FRRIGLRMKAYLP+GIRGVFDG
Sbjct: 590  AQAKKLRAERLLAKIEVSMLPSGPDYDQETITDEERAVFRRIGLRMKAYLPLGIRGVFDG 649

Query: 2080 VIENMHLHWKHRELVKLISKQKTLSFVEDTARLLEYESGGILVAVEKVPKGYALIYYRGK 2259
            VIENMHLHWKHRELVKLISKQKTL+F EDTARLLEYESGGILVA+E+VPKG+ALIYYRGK
Sbjct: 650  VIENMHLHWKHRELVKLISKQKTLAFAEDTARLLEYESGGILVAIERVPKGFALIYYRGK 709

Query: 2260 NYQRPISIRPRNLLTKAKALKRSVAMQRHEALS 2358
            NY+RPI++RPRNLLTKAKALKRSVAMQRHE  S
Sbjct: 710  NYRRPINLRPRNLLTKAKALKRSVAMQRHEVSS 742


>ref|XP_006406610.1| hypothetical protein EUTSA_v10020034mg [Eutrema salsugineum]
            gi|557107756|gb|ESQ48063.1| hypothetical protein
            EUTSA_v10020034mg [Eutrema salsugineum]
          Length = 874

 Score =  874 bits (2257), Expect = 0.0
 Identities = 467/819 (57%), Positives = 563/819 (68%), Gaps = 50/819 (6%)
 Frame = +1

Query: 103  MAFCTAKLTEVPLHNSIPLRXXXXXXXXXXXXXXXXXXXXXXX-KPFSTSTSSLRSTEHI 279
            MA     +TE+PL +S+PL                         +P     SSLR++E  
Sbjct: 1    MALVPPNITEMPLRSSLPLTSSSRYCSSPSLHALLFYSLSAKPSRPIVRQFSSLRTSERS 60

Query: 280  XXXXXXXXXXXXXXXXVTSAPWLNKWSSVNSSLDTDKRQKV-------------EDDRAE 420
                              + PW++KW   ++       +KV             E+  A+
Sbjct: 61   SNNRSHNNRRLDQRHSKPTPPWIDKWPPSSAGAGDHSGKKVAEQNGGGKIRSAEEEAEAK 120

Query: 421  SRYFDGDKGRGAIERIVYRLRNLGLESXXXXXXXXXXXXXXXXXXXMPCNGEEKLGELLQ 600
             RY + DKG  AIERIV RLRNLGL S                    P  GEE+LG+LL+
Sbjct: 121  RRYLEKDKGHSAIERIVLRLRNLGLASDDEDDVEDNEGDGINGGDVKPVTGEERLGDLLK 180

Query: 601  RKWSRPDSIIVD----EDEDEGGLLPWXXXXXXXXXXXXXXXG--LKKKRVKAPTLAELT 762
            R+W RPD ++ +     DED+  LLPW               G  +KK+R +AP+LAELT
Sbjct: 181  REWVRPDMMLAEGEEESDEDDDVLLPWEKNEEEQAAERMEGDGAAVKKRRARAPSLAELT 240

Query: 763  IEDVXXXXXXXXXXXXXXXINIPKAGITQVILETIHDKWRKSELVRLKFHETLATDMKTA 942
            +ED                I+IPKAG+TQ ++E IHD WRK ELVRLKFHE LA DM+TA
Sbjct: 241  VEDSELRRLRRDGMYLRVRISIPKAGLTQAVMEKIHDTWRKEELVRLKFHEVLARDMRTA 300

Query: 943  HEIVERRTGGLVIWRSGSVMVVYRGTNYERPSLRSQSVLREGDTLFVPSISSADHLIAKN 1122
            HEIVERRTGG+VIWR+GSVMVVYRG +Y+ PS+ S  + R  +TLFVP +SSA      +
Sbjct: 301  HEIVERRTGGMVIWRAGSVMVVYRGRDYQGPSMISNQMARPEETLFVPDVSSAGDEATGS 360

Query: 1123 GNDAISIPEKSEPYFMSP-DSERMTQEEAEYNSLLDGLGPRFIDWWGTGLLPVDADLLPS 1299
             ++  + PE  +P   +P   E MT+EEAE+NSLLD LGPRF +WWGTG+LPV+ADLLP 
Sbjct: 361  KDNQSAPPEIKDPIVRNPIRKETMTEEEAEFNSLLDSLGPRFHEWWGTGVLPVNADLLPP 420

Query: 1300 TIPGYKTPFRLLPIGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIVKLWDK 1479
            TIPGYKTPFRLLP GMR  LTNAEMTNLRK+ K+LPCHFALGRNRNHQGLAAAI+KLW+K
Sbjct: 421  TIPGYKTPFRLLPTGMRSNLTNAEMTNLRKIGKTLPCHFALGRNRNHQGLAAAILKLWEK 480

Query: 1480 SLVVKIAVKRGIQNTNNKLMAEELKNLTGGILLLRNKYYIVIYRGKDFLPTSVAATLAER 1659
            SL+ KIAVKRGIQNTNNKLMA+E+K LTGG+LLLRNKYYIVIYRGKDFLP+SVAATLAER
Sbjct: 481  SLIAKIAVKRGIQNTNNKLMADEIKTLTGGVLLLRNKYYIVIYRGKDFLPSSVAATLAER 540

Query: 1660 QELTKEIQDVEEKVRSGGVGFAPT----------------NRFEGK-------------A 1752
            QELTKEIQDVEE+VR+  +  +                   R   +             A
Sbjct: 541  QELTKEIQDVEERVRTRDIETSQPVGDTVPAEAGTLADIEERVNNRDIEASQPVGDKVPA 600

Query: 1753 LAGTLAEFHEAQARWGREISVEEHEKMKEEASKAKNARIVKRIEHKLAIAQAKTLRAERL 1932
             AGTLAEF+EAQARWG+EI+ +  EKM EEAS+  +AR+VKRI+HKL +AQ+K  RAE+L
Sbjct: 601  EAGTLAEFYEAQARWGKEITPDHREKMIEEASRVASARVVKRIQHKLNLAQSKFHRAEKL 660

Query: 1933 LAKIEVSMVPAGPSDDQETITDEERFMFRRIGLRMKAYLPIGIRGVFDGVIENMHLHWKH 2112
            L+KIE SM+P GP  DQE I++EER MFR++GL+MK+YLP+GIRGVFDGVIENMHLHWKH
Sbjct: 661  LSKIEASMIPNGPDYDQEVISEEERIMFRKVGLKMKSYLPLGIRGVFDGVIENMHLHWKH 720

Query: 2113 RELVKLISKQKTLSFVEDTARLLEYESGGILVAVEKVPKGYALIYYRGKNYQRPISIRPR 2292
            RELVKLISKQK+L+FVEDTARLLEYESGG+LVA+EKVPKG+ALIYYRGKNYQRPIS+RPR
Sbjct: 721  RELVKLISKQKSLAFVEDTARLLEYESGGVLVAIEKVPKGFALIYYRGKNYQRPISLRPR 780

Query: 2293 NLLTKAKALKRSVAMQRHEALSQHISELESAIEQMKTEI 2409
            NLLTKAKALKRS+AMQRHEALSQHISELE  IEQM+ E+
Sbjct: 781  NLLTKAKALKRSIAMQRHEALSQHISELEKTIEQMQNEL 819


>ref|XP_006341605.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum tuberosum]
          Length = 824

 Score =  867 bits (2241), Expect = 0.0
 Identities = 455/700 (65%), Positives = 534/700 (76%), Gaps = 6/700 (0%)
 Frame = +1

Query: 334  SAPWLNKWSSVNSSLDTDKRQKVEDDRAESRYFDGDK--GRGAIERIVYRLRNLGLESXX 507
            S+ WLNKW + +  +      +  + + E+RYFD +   G  AI+RIV RLRNLGL S  
Sbjct: 71   SSTWLNKWPNTSPPVKHSSNSRTVESKTETRYFDENTRVGTTAIDRIVLRLRNLGLGSDD 130

Query: 508  XXXXXXXXXXXXXXXXX--MPCNGEE-KLGELLQRKWSRPDSIIVDEDEDEGGLLPWXXX 678
                               M  NGEE KLG+LL+R W RPD I+ + D++    LPW   
Sbjct: 131  EGEGEDEEEGNLKLDSSSTMQVNGEEEKLGDLLKRDWVRPDMILEESDDEGDTYLPWERS 190

Query: 679  XXXXXXXXXXXXGLKKKRVKAPTLAELTIEDVXXXXXXXXXXXXXXXINIPKAGITQVIL 858
                           K+ VKAP+LAELTIED                IN+PKAG+T  +L
Sbjct: 191  VEEEAVEVQRGG---KRTVKAPSLAELTIEDEELRRLRRMGMTLRERINVPKAGVTGAVL 247

Query: 859  ETIHDKWRKSELVRLKFHETLATDMKTAHEIVERRTGGLVIWRSGSVMVVYRGTNYERPS 1038
            E IH  WRK+ELVRLKFHE LA DM+T HEIVERRT GLVIWR+GSVMVVYRG+NYE PS
Sbjct: 248  EKIHHSWRKNELVRLKFHEVLAHDMRTGHEIVERRTRGLVIWRAGSVMVVYRGSNYEGPS 307

Query: 1039 LRSQSVLREGDTLFVPSISSADHLIAKNGNDAISIPEKSEPYFMSPDS-ERMTQEEAEYN 1215
             RSQSV  E + LFVP +SS D  I K+      + E      + P+S + MT EE+E+N
Sbjct: 308  SRSQSVNEEDNALFVPDVSS-DKSITKDNKSFNPVIENRNQ--VHPNSVQSMTVEESEFN 364

Query: 1216 SLLDGLGPRFIDWWGTGLLPVDADLLPSTIPGYKTPFRLLPIGMRPRLTNAEMTNLRKLA 1395
             +LDGLGPRF DWWGTG+LPVDADLLP TIPGYKTPFRLLP GMR RLTNAEMTNLRK+A
Sbjct: 365  RVLDGLGPRFEDWWGTGVLPVDADLLPQTIPGYKTPFRLLPTGMRSRLTNAEMTNLRKIA 424

Query: 1396 KSLPCHFALGRNRNHQGLAAAIVKLWDKSLVVKIAVKRGIQNTNNKLMAEELKNLTGGIL 1575
            KSLPCHFALGRNRNHQGLAAAIVKLW+KSLVVKIAVKRGIQNTNNKLM+EELK LTGG+L
Sbjct: 425  KSLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMSEELKMLTGGVL 484

Query: 1576 LLRNKYYIVIYRGKDFLPTSVAATLAERQELTKEIQDVEEKVRSGGVGFAPTNRFEGKAL 1755
            LLRNKYYI+ YRGKDF+P +VAA LAERQELTK+IQDVEE+ RSG    AP    +G+A+
Sbjct: 485  LLRNKYYIIFYRGKDFVPPTVAAVLAERQELTKQIQDVEEQTRSGPAKVAPLTT-DGQAV 543

Query: 1756 AGTLAEFHEAQARWGREISVEEHEKMKEEASKAKNARIVKRIEHKLAIAQAKTLRAERLL 1935
            AG+LAEF+EAQARWGREIS EE E+M +EA+ AK AR+VKR+EHK  I+Q K L+AE++L
Sbjct: 544  AGSLAEFYEAQARWGREISAEERERMLKEAAMAKTARVVKRLEHKFEISQTKKLKAEKIL 603

Query: 1936 AKIEVSMVPAGPSDDQETITDEERFMFRRIGLRMKAYLPIGIRGVFDGVIENMHLHWKHR 2115
            AKI  S +PAGPSDD ETIT+EER M RR+GLRMK+YLP+GIRGVFDGVIENMHLHWKHR
Sbjct: 604  AKIVESWIPAGPSDDLETITEEERVMLRRVGLRMKSYLPLGIRGVFDGVIENMHLHWKHR 663

Query: 2116 ELVKLISKQKTLSFVEDTARLLEYESGGILVAVEKVPKGYALIYYRGKNYQRPISIRPRN 2295
            ELVKLISK+K L+FVE+TARLLEYESGGILVA+E+VPKGYALI+YRGKNY+RPIS+RPRN
Sbjct: 664  ELVKLISKEKVLAFVEETARLLEYESGGILVAIERVPKGYALIFYRGKNYRRPISLRPRN 723

Query: 2296 LLTKAKALKRSVAMQRHEALSQHISELESAIEQMKTEIAE 2415
            LLTKAKALKR VA+QR+EALSQHI+ELE+ IEQ K++I +
Sbjct: 724  LLTKAKALKRRVALQRYEALSQHIAELETTIEQTKSKIVD 763


>ref|XP_002883129.1| EMB1865 [Arabidopsis lyrata subsp. lyrata]
            gi|297328969|gb|EFH59388.1| EMB1865 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 846

 Score =  867 bits (2239), Expect = 0.0
 Identities = 455/714 (63%), Positives = 537/714 (75%), Gaps = 24/714 (3%)
 Frame = +1

Query: 340  PWLNKWSSVNSSLDTDK--------------RQKVEDDRAESRYFDGDKGRGAIERIVYR 477
            PW++KW   ++ +  D               R   E+  A+ RY + DKG+ AIERIV R
Sbjct: 81   PWIDKWPPSSAGVGGDHAGKRGGENNGGDKIRSAEEEAEAKLRYLERDKGQNAIERIVLR 140

Query: 478  LRNLGLESXXXXXXXXXXXXXXXXXXXMPCNGEEKLGELLQRKWSRPDSIIVD----EDE 645
            LRNLGL S                    P  GEE+LG+LL+R+W RPD ++ +    E+E
Sbjct: 141  LRNLGLGSDDEEDVEDEEGGGINGGDVKPVTGEERLGDLLKREWVRPDMMLAEGEESEEE 200

Query: 646  DEGGLLPWXXXXXXXXXXXXXXXG----LKKKRVKAPTLAELTIEDVXXXXXXXXXXXXX 813
            DE  LLPW               G    +KK R +AP+LAELT+ED              
Sbjct: 201  DEV-LLPWEKNEEEQAAERVEGEGGVAVMKKGRARAPSLAELTVEDSELRRLRRDGMYLR 259

Query: 814  XXINIPKAGITQVILETIHDKWRKSELVRLKFHETLATDMKTAHEIVERRTGGLVIWRSG 993
              INIPKAG+TQ ++E I+D WRK ELVRLKFHE LA DMKTAHEIVERRTGG+VIWR+G
Sbjct: 260  VRINIPKAGLTQAVMEKIYDTWRKEELVRLKFHEVLARDMKTAHEIVERRTGGMVIWRAG 319

Query: 994  SVMVVYRGTNYERPSLRSQSVLREGDTLFVPSISSADHLIAKNGNDAISIP-EKSEPYFM 1170
            SVMVVYRG +Y+ P + S  +    +TLFVP +SSA    A N  D  S P E  +P   
Sbjct: 320  SVMVVYRGLDYKGPPVISNQMAGPKETLFVPDVSSAGDE-ATNAKDNQSPPSEIKDPIIK 378

Query: 1171 SP-DSERMTQEEAEYNSLLDGLGPRFIDWWGTGLLPVDADLLPSTIPGYKTPFRLLPIGM 1347
            +P   E MT+EEAE+NSLLD LGPRF +WWGTG+LPVDADLLP TIPGYKTPFRLLP GM
Sbjct: 379  NPIRKENMTEEEAEFNSLLDSLGPRFQEWWGTGVLPVDADLLPPTIPGYKTPFRLLPTGM 438

Query: 1348 RPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIVKLWDKSLVVKIAVKRGIQNTN 1527
            R  LTNAEMTNLRK+ K+LPCHFALGRNRNHQGLAAAI+++W+KSL+ KIAVKRGIQNTN
Sbjct: 439  RSNLTNAEMTNLRKIGKTLPCHFALGRNRNHQGLAAAILQIWEKSLIAKIAVKRGIQNTN 498

Query: 1528 NKLMAEELKNLTGGILLLRNKYYIVIYRGKDFLPTSVAATLAERQELTKEIQDVEEKVRS 1707
            NKLMA+E+K LTGG+LLLRNKYYIVIYRGKDFLP+SVAATLAERQELTKEIQDVEE+VR+
Sbjct: 499  NKLMADEVKALTGGVLLLRNKYYIVIYRGKDFLPSSVAATLAERQELTKEIQDVEERVRN 558

Query: 1708 GGVGFAPTNRFEGKALAGTLAEFHEAQARWGREISVEEHEKMKEEASKAKNARIVKRIEH 1887
              +        +  A AGTLAEF+EAQARWG+EI+ +  EKM EEAS+  NAR+VKRI+H
Sbjct: 559  REIEAVQPVGDKVPAEAGTLAEFYEAQARWGKEITPDHREKMIEEASRVANARVVKRIQH 618

Query: 1888 KLAIAQAKTLRAERLLAKIEVSMVPAGPSDDQETITDEERFMFRRIGLRMKAYLPIGIRG 2067
            KL +AQ+K  RAE+LL+KIE SM+P GP  DQE I++EER MFR++GL+MKAYLP+GIRG
Sbjct: 619  KLNLAQSKFQRAEKLLSKIEASMIPNGPDYDQEVISEEERAMFRKVGLKMKAYLPLGIRG 678

Query: 2068 VFDGVIENMHLHWKHRELVKLISKQKTLSFVEDTARLLEYESGGILVAVEKVPKGYALIY 2247
            VFDGVIENMHLHWKHRELVKLISKQK L+FVEDTARLLEYESGG+LVA+EKVPKG+ALIY
Sbjct: 679  VFDGVIENMHLHWKHRELVKLISKQKNLAFVEDTARLLEYESGGVLVAIEKVPKGFALIY 738

Query: 2248 YRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELESAIEQMKTEI 2409
            YRGKNY+RPIS+RPRNLLTKAKALKRS+AMQRHEALSQHISELE  IEQM++E+
Sbjct: 739  YRGKNYRRPISLRPRNLLTKAKALKRSIAMQRHEALSQHISELERTIEQMQSEL 792


>ref|XP_004235759.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum lycopersicum]
          Length = 820

 Score =  865 bits (2236), Expect = 0.0
 Identities = 454/700 (64%), Positives = 534/700 (76%), Gaps = 6/700 (0%)
 Frame = +1

Query: 334  SAPWLNKWSSVNSSLDTDKRQKVEDDRAESRYFDGDK--GRGAIERIVYRLRNLGLESXX 507
            S+ WLNKW + +S +      +  + + E+RYFD +   G  AI+RIV RLRNLGL S  
Sbjct: 71   SSTWLNKWPNTSSPVKHSSNSRTVESKTETRYFDENTRVGTTAIDRIVLRLRNLGLGSDD 130

Query: 508  XXXXXXXXXXXXXXXXX--MPCNGEE-KLGELLQRKWSRPDSIIVDEDEDEGGLLPWXXX 678
                               M  NGEE KLG+LL+R W RPD I+ + D++    LPW   
Sbjct: 131  EGEGEDEEEGNLKLDSSSTMQVNGEEEKLGDLLKRDWVRPDMILEESDDEGDTYLPWERS 190

Query: 679  XXXXXXXXXXXXGLKKKRVKAPTLAELTIEDVXXXXXXXXXXXXXXXINIPKAGITQVIL 858
                           K+ V+AP+LAELTIED                IN+PKAG+T  +L
Sbjct: 191  VEEEAVEVQRGG---KRTVRAPSLAELTIEDEELRRLRRIGMTLRERINVPKAGVTGAVL 247

Query: 859  ETIHDKWRKSELVRLKFHETLATDMKTAHEIVERRTGGLVIWRSGSVMVVYRGTNYERPS 1038
            E IH  WRK+ELVRLKFHE LA DM+T HEIVERRT GLVIWR+GSVMVVYRG+NYE PS
Sbjct: 248  EKIHHSWRKNELVRLKFHEVLAHDMRTGHEIVERRTKGLVIWRAGSVMVVYRGSNYEGPS 307

Query: 1039 LRSQSVLREGDTLFVPSISSADHLIAKNGNDAISIPEKSEPYFMSPDS-ERMTQEEAEYN 1215
             RSQSV  E + LFVP +SS D  I K+      + E      + P+  + MT+EE+E+N
Sbjct: 308  SRSQSVNEEDNALFVPDVSS-DKSITKDNKSFNPVIENRNQ--VHPNRVQSMTEEESEFN 364

Query: 1216 SLLDGLGPRFIDWWGTGLLPVDADLLPSTIPGYKTPFRLLPIGMRPRLTNAEMTNLRKLA 1395
             +LDGLGPRF DWWGTG+LPVDADLLP TIPGYKTPFRLLP GMR RLTNAEMTNLRK+A
Sbjct: 365  RVLDGLGPRFEDWWGTGVLPVDADLLPQTIPGYKTPFRLLPTGMRSRLTNAEMTNLRKIA 424

Query: 1396 KSLPCHFALGRNRNHQGLAAAIVKLWDKSLVVKIAVKRGIQNTNNKLMAEELKNLTGGIL 1575
            KSLPCHFALGRNRNHQGLAAAIVKLW+KSLVVKIAVKRGIQNTNNKLM+EELK LTGG+L
Sbjct: 425  KSLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMSEELKMLTGGVL 484

Query: 1576 LLRNKYYIVIYRGKDFLPTSVAATLAERQELTKEIQDVEEKVRSGGVGFAPTNRFEGKAL 1755
            LLRNKYYI+ YRGKDF+P +VAA LAERQELTK+IQDVEE+ RSG    AP    +G+A+
Sbjct: 485  LLRNKYYIIFYRGKDFVPPTVAAVLAERQELTKQIQDVEEQTRSGPAKVAPLIT-DGQAV 543

Query: 1756 AGTLAEFHEAQARWGREISVEEHEKMKEEASKAKNARIVKRIEHKLAIAQAKTLRAERLL 1935
            AG+LAEF+EAQARWGREIS EE E+M +EA+ AK AR+VKR+EHK  I+Q K L+AE++L
Sbjct: 544  AGSLAEFYEAQARWGREISAEERERMLKEAAMAKMARVVKRLEHKFEISQTKKLKAEKIL 603

Query: 1936 AKIEVSMVPAGPSDDQETITDEERFMFRRIGLRMKAYLPIGIRGVFDGVIENMHLHWKHR 2115
            AKI  S +PAGPSDD ETIT+EER M RR+GLRMK+YLP+GIRGVFDGVIENMHLHWKHR
Sbjct: 604  AKIVESWIPAGPSDDLETITEEERVMLRRVGLRMKSYLPLGIRGVFDGVIENMHLHWKHR 663

Query: 2116 ELVKLISKQKTLSFVEDTARLLEYESGGILVAVEKVPKGYALIYYRGKNYQRPISIRPRN 2295
            ELVKLISK+K L+FVE+TARLLEYESGGILVA+E+VPKGYALI+YRGKNY+RPIS+RPRN
Sbjct: 664  ELVKLISKEKVLAFVEETARLLEYESGGILVAIERVPKGYALIFYRGKNYRRPISLRPRN 723

Query: 2296 LLTKAKALKRSVAMQRHEALSQHISELESAIEQMKTEIAE 2415
            LLTKAKALKR VA+QR+EALSQHI ELE+ IEQ K++I +
Sbjct: 724  LLTKAKALKRRVALQRYEALSQHIGELETTIEQTKSKIVD 763


>ref|NP_188468.1| CRS1 / YhbY domain-containing protein EMB1865 [Arabidopsis thaliana]
            gi|11994102|dbj|BAB01105.1| unnamed protein product
            [Arabidopsis thaliana] gi|17380904|gb|AAL36264.1| unknown
            protein [Arabidopsis thaliana]
            gi|332642570|gb|AEE76091.1| CRS1 / YhbY (CRM)
            domain-containing protein [Arabidopsis thaliana]
          Length = 848

 Score =  861 bits (2225), Expect = 0.0
 Identities = 466/799 (58%), Positives = 556/799 (69%), Gaps = 30/799 (3%)
 Frame = +1

Query: 103  MAFCTAKLTEVPLHNSIPLRXXXXXXXXXXXXXXXXXXXXXXX------KPFSTSTSSLR 264
            MA      TE+PL +S+PL                              +PFS+  +S R
Sbjct: 1    MALAPLNFTEMPLRSSLPLTSSSRYCSSPSLHALLFYSLGVKPSRQQIVRPFSSLRTSER 60

Query: 265  STEHIXXXXXXXXXXXXXXXXVTSAPWLNKWSSVNSSLDTDK--------------RQKV 402
            S                      + PW++KW   +S    D               R   
Sbjct: 61   SNNRSNNNRRLDQRNHKP-----TPPWIDKWPPSSSGAGGDHAGKKGGENNGGDRIRSAE 115

Query: 403  EDDRAESRYFDGDKGRGAIERIVYRLRNLGLESXXXXXXXXXXXXXXXXXXXMPCNGEEK 582
            E+  A+ RY + DKG+ AIERIV RLRNLGL S                    P  GEE+
Sbjct: 116  EEAEAKLRYLEKDKGQNAIERIVLRLRNLGLGSDDEDDVEDDEGGGINGGDVKPVTGEER 175

Query: 583  LGELLQRKWSRPDSIIVD----EDEDEGGLLPWXXXXXXXXXXXXXXXG----LKKKRVK 738
            LG+LL+R+W RPD ++ +    E+EDE  LLPW               G    ++K+R +
Sbjct: 176  LGDLLKREWVRPDMMLAEGEESEEEDEV-LLPWEKNEEEQAAERVVGEGGVAVMQKRRAR 234

Query: 739  APTLAELTIEDVXXXXXXXXXXXXXXXINIPKAGITQVILETIHDKWRKSELVRLKFHET 918
            AP+LAELT+ED                INIPKAG+TQ ++E I+D WRK ELVRLKFHE 
Sbjct: 235  APSLAELTVEDSELRRLRRDGMYLRVRINIPKAGLTQAVMEKIYDTWRKEELVRLKFHEV 294

Query: 919  LATDMKTAHEIVERRTGGLVIWRSGSVMVVYRGTNYERPSLRSQSVLREGDTLFVPSISS 1098
            LA DMKTAHEIVERRTGG+VIWR+GSVMVVYRG +Y+ P + S  +    +TLFVP +SS
Sbjct: 295  LARDMKTAHEIVERRTGGMVIWRAGSVMVVYRGLDYKGPPVISNQMAGPKETLFVPDVSS 354

Query: 1099 ADHLIAKNGNDAISIPEK-SEPYFMSP-DSERMTQEEAEYNSLLDGLGPRFIDWWGTGLL 1272
            A    A N  D  S P    +P   +P   E MT+EE E+NSLLD LGPRF +WWGTG+L
Sbjct: 355  AGDE-ATNAKDNQSAPLVIKDPIIKNPIRKENMTEEEVEFNSLLDSLGPRFQEWWGTGVL 413

Query: 1273 PVDADLLPSTIPGYKTPFRLLPIGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLA 1452
            PVDADLLP TIPGYKTPFRLLP GMR  LTNAEMTNLRK+ K+LPCHFALGRNRNHQGLA
Sbjct: 414  PVDADLLPPTIPGYKTPFRLLPTGMRSNLTNAEMTNLRKIGKTLPCHFALGRNRNHQGLA 473

Query: 1453 AAIVKLWDKSLVVKIAVKRGIQNTNNKLMAEELKNLTGGILLLRNKYYIVIYRGKDFLPT 1632
            AAI+++W+KSL+ KIAVKRGIQNTNNKLMA+E+K LTGG+LLLRNKYYIVIYRGKDFLP+
Sbjct: 474  AAILQIWEKSLIAKIAVKRGIQNTNNKLMADEVKTLTGGVLLLRNKYYIVIYRGKDFLPS 533

Query: 1633 SVAATLAERQELTKEIQDVEEKVRSGGVGFAPTNRFEGKALAGTLAEFHEAQARWGREIS 1812
            SVAATLAERQELTKEIQDVEE+VR+  +        +  A AGTLAEF+EAQARWG+EI+
Sbjct: 534  SVAATLAERQELTKEIQDVEERVRNREIEAVQPVGDKVPAEAGTLAEFYEAQARWGKEIT 593

Query: 1813 VEEHEKMKEEASKAKNARIVKRIEHKLAIAQAKTLRAERLLAKIEVSMVPAGPSDDQETI 1992
             +  EKM EEAS+  NAR+VKRI+HKL +AQ+K  RAE+LL+KIE SM+P GP  DQE I
Sbjct: 594  PDHREKMIEEASRVANARVVKRIQHKLNLAQSKFQRAEKLLSKIEASMIPNGPDYDQEVI 653

Query: 1993 TDEERFMFRRIGLRMKAYLPIGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFVEDTA 2172
            ++EER MFR++GL+MKAYLPIGIRGVFDGVIENMHLHWKHRELVKLISKQK  +FVE+TA
Sbjct: 654  SEEERAMFRKVGLKMKAYLPIGIRGVFDGVIENMHLHWKHRELVKLISKQKNQAFVEETA 713

Query: 2173 RLLEYESGGILVAVEKVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEA 2352
            RLLEYESGG+LVA+EKVPKG+ALIYYRGKNY+RPIS+RPRNLLTKAKALKRS+AMQRHEA
Sbjct: 714  RLLEYESGGVLVAIEKVPKGFALIYYRGKNYRRPISLRPRNLLTKAKALKRSIAMQRHEA 773

Query: 2353 LSQHISELESAIEQMKTEI 2409
            LSQHISELE  IEQM++++
Sbjct: 774  LSQHISELERTIEQMQSQL 792


>ref|XP_003533366.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max]
          Length = 791

 Score =  860 bits (2221), Expect = 0.0
 Identities = 449/696 (64%), Positives = 527/696 (75%), Gaps = 4/696 (0%)
 Frame = +1

Query: 334  SAPWLNKWSSVNSSLDTDKRQKVEDDRAESRYFDGDKGRGAIERIVYRLRNLGLESXXXX 513
            SAPWL K  S   +++         DR         K + A++RIV RLRNLGL S    
Sbjct: 49   SAPWLTKSPSPKRAVEPLPAGDPTPDR---------KPQNAVDRIVLRLRNLGLPSEEEE 99

Query: 514  XXXXXXXXXXXXXXXMPCNGEEKLGELLQRKWSRPDSIIV--DEDEDEGGLLPWXXXXXX 687
                            P  GEE+LGELLQR+W RPD+++V  D+DE+E  +LPW      
Sbjct: 100  QEQEHEEEIPATNPA-PVTGEERLGELLQREWVRPDAVLVGEDDDEEEEMMLPWERDEEE 158

Query: 688  XXXXXXXXXGL-KKKRVKAPTLAELTIEDVXXXXXXXXXXXXXXXINIPKAGITQVILET 864
                     GL KK+RV+AP+LA+LT+ED                +++PKAG+T+ ++E 
Sbjct: 159  KEVVVVSEEGLLKKRRVRAPSLADLTLEDELLRRLRREGMRVRERVSVPKAGLTEEVMEK 218

Query: 865  IHDKWRKSELVRLKFHETLATDMKTAHEIVERRTGGLVIWRSGSVMVVYRGTNYERPSLR 1044
            IH +WRK ELVRLKFHE LA DM+ AHEIVERRTGGLV WRSGSVM+VYRG +Y+ P  R
Sbjct: 219  IHKRWRKEELVRLKFHEELAKDMRKAHEIVERRTGGLVTWRSGSVMMVYRGIDYQGPDSR 278

Query: 1045 SQSVLREGDTLFVPSISSADHLIAKNGNDAISIPEKSEPYFMSPDS-ERMTQEEAEYNSL 1221
             +   ++GD  FVP +S       +  + A S  EKSE      +  E M++ EAEYN+L
Sbjct: 279  KELNEKKGDGFFVPDVSK------REDSTATSTSEKSEVVVREREHPENMSEAEAEYNAL 332

Query: 1222 LDGLGPRFIDWWGTGLLPVDADLLPSTIPGYKTPFRLLPIGMRPRLTNAEMTNLRKLAKS 1401
            LDGLGPRF  WWGTG+LPVDADLLP T+PGYKTPFRLLP GMR RLTNAEMTNLRKLAKS
Sbjct: 333  LDGLGPRFFGWWGTGILPVDADLLPRTVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLAKS 392

Query: 1402 LPCHFALGRNRNHQGLAAAIVKLWDKSLVVKIAVKRGIQNTNNKLMAEELKNLTGGILLL 1581
            LPCHFA+GRNRNHQGLA AI+KLW+KSLV KIAVKRGIQNTNN+LMAEELK LTGG LLL
Sbjct: 393  LPCHFAVGRNRNHQGLACAILKLWEKSLVSKIAVKRGIQNTNNELMAEELKMLTGGTLLL 452

Query: 1582 RNKYYIVIYRGKDFLPTSVAATLAERQELTKEIQDVEEKVRSGGVGFAPTNRFEGKALAG 1761
            RNKY+IVIYRGKDF+PTSVAA LAER+ELTK++QDVE+KVR   V   P+ + E  A AG
Sbjct: 453  RNKYFIVIYRGKDFVPTSVAAVLAEREELTKQVQDVEDKVRCRAVDAIPSGQGEATAQAG 512

Query: 1762 TLAEFHEAQARWGREISVEEHEKMKEEASKAKNARIVKRIEHKLAIAQAKTLRAERLLAK 1941
            TLAEF+EAQARWGREIS +E EKM EEA+KAK A++V++IEHK+ IAQ K LRAE+LLAK
Sbjct: 513  TLAEFYEAQARWGREISPDEREKMMEEAAKAKTAKLVRQIEHKIFIAQTKKLRAEKLLAK 572

Query: 1942 IEVSMVPAGPSDDQETITDEERFMFRRIGLRMKAYLPIGIRGVFDGVIENMHLHWKHREL 2121
            IE SMVPAGP  DQETITDEER MFR++GLRMK YLP+GIRGVFDGV+ENMHLHWKHREL
Sbjct: 573  IEASMVPAGPDYDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVVENMHLHWKHREL 632

Query: 2122 VKLISKQKTLSFVEDTARLLEYESGGILVAVEKVPKGYALIYYRGKNYQRPISIRPRNLL 2301
            VKL++KQKTL+FVEDTARLLEYESGGILVA+EKV K +ALIYYRGKNY+RPI++RPRNLL
Sbjct: 633  VKLMTKQKTLAFVEDTARLLEYESGGILVAIEKVSKEFALIYYRGKNYKRPITLRPRNLL 692

Query: 2302 TKAKALKRSVAMQRHEALSQHISELESAIEQMKTEI 2409
            TK KALKR VAMQRHEALSQHI+ELE  IEQMK E+
Sbjct: 693  TKGKALKRHVAMQRHEALSQHITELEKTIEQMKKEL 728


>ref|XP_003530015.2| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Glycine max]
          Length = 791

 Score =  853 bits (2203), Expect = 0.0
 Identities = 446/695 (64%), Positives = 523/695 (75%), Gaps = 3/695 (0%)
 Frame = +1

Query: 334  SAPWLNKWSSVNSSLDTDKRQKVEDDRAESRYFDGDKGRGAIERIVYRLRNLGLESXXXX 513
            SAPWL K  S   + +         D+         K    +ERIV RLRNLGL S    
Sbjct: 51   SAPWLTKSPSPKRATEPLTAGDPIPDK---------KPHNPVERIVLRLRNLGLPSEEEE 101

Query: 514  XXXXXXXXXXXXXXXMPCNGEEKLGELLQRKWSRPDSIIVDEDE-DEGGLLPWXXXXXXX 690
                            P  GEE+LGELL+R+W RPD+++V ED+ +E  +LPW       
Sbjct: 102  QEEEEEIPANNPA---PVTGEERLGELLRREWVRPDAVLVGEDDGEEEMILPWEREEEKE 158

Query: 691  XXXXXXXXGL-KKKRVKAPTLAELTIEDVXXXXXXXXXXXXXXXINIPKAGITQVILETI 867
                    GL KK+RV+AP+LA+LT+ED                +++PKAG+TQ ++E I
Sbjct: 159  VVVVVSEEGLLKKRRVRAPSLADLTLEDELLRRLRREGMRVRERVSVPKAGLTQEVMEKI 218

Query: 868  HDKWRKSELVRLKFHETLATDMKTAHEIVERRTGGLVIWRSGSVMVVYRGTNYERPSLRS 1047
            H +WRK ELVRLKFHE LA DM+ AHEIVERRTGGLV WRSGSVM+VYRG +Y+ P  + 
Sbjct: 219  HKRWRKEELVRLKFHEELAKDMRKAHEIVERRTGGLVTWRSGSVMMVYRGIDYQGPDSQK 278

Query: 1048 QSVLREGDTLFVPSISSADHLIAKNGNDAISIPEKSEPYFMSPDS-ERMTQEEAEYNSLL 1224
            +   ++GD  FVP +S  +     + + A S  EKSE      +  E M++ EAEYN+LL
Sbjct: 279  EVNEKKGDGFFVPDVSKRE-----DSSTATSTSEKSEVVVREREHPENMSEAEAEYNALL 333

Query: 1225 DGLGPRFIDWWGTGLLPVDADLLPSTIPGYKTPFRLLPIGMRPRLTNAEMTNLRKLAKSL 1404
            DGLGPRF+ WWGTG+LPVDADLLP T+PGYKTPFRLLP GMR RLTNAEMTNLRKLAKSL
Sbjct: 334  DGLGPRFVGWWGTGILPVDADLLPRTVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLAKSL 393

Query: 1405 PCHFALGRNRNHQGLAAAIVKLWDKSLVVKIAVKRGIQNTNNKLMAEELKNLTGGILLLR 1584
            PCHFALGRNRNHQGLA AI+KLW+KSLV KIAVKRGIQNTNN+LMAEELK LTGG LLLR
Sbjct: 394  PCHFALGRNRNHQGLACAILKLWEKSLVAKIAVKRGIQNTNNELMAEELKMLTGGTLLLR 453

Query: 1585 NKYYIVIYRGKDFLPTSVAATLAERQELTKEIQDVEEKVRSGGVGFAPTNRFEGKALAGT 1764
            NKY+IVIYRGKDF+PTSVAA LAER+ELTK++QDVE+KVR   V   P  + E  A AGT
Sbjct: 454  NKYFIVIYRGKDFVPTSVAAVLAEREELTKQVQDVEDKVRCRAVDAIPLGQGEATAQAGT 513

Query: 1765 LAEFHEAQARWGREISVEEHEKMKEEASKAKNARIVKRIEHKLAIAQAKTLRAERLLAKI 1944
            LAEF+EAQARWGREIS EE EKM EEA+K K A++V++IEHK+ IAQ K LRAE+LLAKI
Sbjct: 514  LAEFYEAQARWGREISPEEREKMVEEAAKTKTAKLVRQIEHKIFIAQTKKLRAEKLLAKI 573

Query: 1945 EVSMVPAGPSDDQETITDEERFMFRRIGLRMKAYLPIGIRGVFDGVIENMHLHWKHRELV 2124
            E SMVPAGP  DQETITDEER MFR++GLRMK YLP+GIRGVFDGV+ENMHLHWKHRELV
Sbjct: 574  EASMVPAGPDYDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVVENMHLHWKHRELV 633

Query: 2125 KLISKQKTLSFVEDTARLLEYESGGILVAVEKVPKGYALIYYRGKNYQRPISIRPRNLLT 2304
            KL++KQKT++FVEDTARLLEYESGGILVA+EKV K +ALIYYRGKNY+RPI++RPRNLLT
Sbjct: 634  KLMTKQKTVAFVEDTARLLEYESGGILVAIEKVSKEFALIYYRGKNYKRPITLRPRNLLT 693

Query: 2305 KAKALKRSVAMQRHEALSQHISELESAIEQMKTEI 2409
            K KALKR VAMQRHEALSQHI+ELE  IEQMK E+
Sbjct: 694  KGKALKRHVAMQRHEALSQHITELEKTIEQMKKEL 728


>ref|XP_004512920.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cicer arietinum]
          Length = 809

 Score =  851 bits (2199), Expect = 0.0
 Identities = 438/694 (63%), Positives = 524/694 (75%), Gaps = 4/694 (0%)
 Frame = +1

Query: 340  PWLNKWSSVNSSLDTDKRQKVEDDRAESRYFDGDKGRGAIERIVYRLRNLGLESXXXXXX 519
            PWL+    V  S   ++   ++ D         +K +  +ERIV+RLRNLGL        
Sbjct: 68   PWLSSPKRVTESPIKNESLNLQHDN--------NKPKNPVERIVFRLRNLGLAEEEGEKE 119

Query: 520  XXXXXXXXXXXXXMPCNGEEKLGELLQRKWSRPDSIIVDEDEDEGGL-LPWXXXXXXXXX 696
                         +P +G+EKL ELL+RKW RPD+++ DED++E  + LPW         
Sbjct: 120  QQEEEVEVSE---LPVSGDEKLSELLKRKWVRPDALLDDEDKEEDEMVLPWKREEEREMG 176

Query: 697  XXXXXX---GLKKKRVKAPTLAELTIEDVXXXXXXXXXXXXXXXINIPKAGITQVILETI 867
                     GLKK+ +KAP+LAELT+ED                +++PKAG+TQ ++E I
Sbjct: 177  GGDVGIDEEGLKKRTIKAPSLAELTLEDELLRRLRREGMRVRERVSVPKAGLTQEVMEKI 236

Query: 868  HDKWRKSELVRLKFHETLATDMKTAHEIVERRTGGLVIWRSGSVMVVYRGTNYERPSLRS 1047
            H++WRK ELVRLKFHE LA +M+ AHEIVERRTGGLV WR+GSVM+VYRG NY+ P+   
Sbjct: 237  HERWRKEELVRLKFHEELAKNMRVAHEIVERRTGGLVTWRAGSVMMVYRGKNYQGPNSSK 296

Query: 1048 QSVLREGDTLFVPSISSADHLIAKNGNDAISIPEKSEPYFMSPDSERMTQEEAEYNSLLD 1227
            +   +EGD  FVP +SS      K+ +   S+   ++        E MT+EEAEYN+LLD
Sbjct: 297  ELDAKEGDGFFVPDVSSKSSSRTKDSSTTASLKNSAQVRRNDEQPENMTKEEAEYNALLD 356

Query: 1228 GLGPRFIDWWGTGLLPVDADLLPSTIPGYKTPFRLLPIGMRPRLTNAEMTNLRKLAKSLP 1407
            GLGPRF +WWGTG+LPVDADLLP  IPGYKTP+RLLP GMR RLT+AE+T+LRK+AKSLP
Sbjct: 357  GLGPRFFEWWGTGILPVDADLLPRDIPGYKTPYRLLPTGMRSRLTSAEITDLRKIAKSLP 416

Query: 1408 CHFALGRNRNHQGLAAAIVKLWDKSLVVKIAVKRGIQNTNNKLMAEELKNLTGGILLLRN 1587
            CHFALGRNR HQGLA AI+KLW+KSL+ KIAVK GIQNTNNKLMA+EL  LTGG LLLR+
Sbjct: 417  CHFALGRNRYHQGLACAILKLWEKSLIAKIAVKPGIQNTNNKLMADELVTLTGGTLLLRD 476

Query: 1588 KYYIVIYRGKDFLPTSVAATLAERQELTKEIQDVEEKVRSGGVGFAPTNRFEGKALAGTL 1767
            KYYIVIYRGKDF+PT VAA LAERQELTKE+QDVEEKVR   V   P+ + E   LAGTL
Sbjct: 477  KYYIVIYRGKDFVPTGVAAVLAERQELTKEVQDVEEKVRCKAVVATPSGQGEATVLAGTL 536

Query: 1768 AEFHEAQARWGREISVEEHEKMKEEASKAKNARIVKRIEHKLAIAQAKTLRAERLLAKIE 1947
            AEF+EAQARWGR+IS EE E+M EEA+KAK+ ++VK+IEH+L++AQ K +RAE+LLAKIE
Sbjct: 537  AEFYEAQARWGRDISTEERERMIEEAAKAKSVKLVKQIEHRLSLAQTKKIRAEKLLAKIE 596

Query: 1948 VSMVPAGPSDDQETITDEERFMFRRIGLRMKAYLPIGIRGVFDGVIENMHLHWKHRELVK 2127
            VSMVP GP  DQETITDEER +FRRIGLRMK YLP+GIRGVFDGVIENMHLHWKHRELVK
Sbjct: 597  VSMVPVGPDYDQETITDEERAVFRRIGLRMKPYLPLGIRGVFDGVIENMHLHWKHRELVK 656

Query: 2128 LISKQKTLSFVEDTARLLEYESGGILVAVEKVPKGYALIYYRGKNYQRPISIRPRNLLTK 2307
            LI+KQK L+FVEDTARLLEYESGGILVA+EKV K +ALIYYRGKNY+RPIS+RPRNLLTK
Sbjct: 657  LITKQKNLAFVEDTARLLEYESGGILVAIEKVSKEFALIYYRGKNYKRPISLRPRNLLTK 716

Query: 2308 AKALKRSVAMQRHEALSQHISELESAIEQMKTEI 2409
            AKALKRSVAMQRHEALS HI+ELE+ IEQMK EI
Sbjct: 717  AKALKRSVAMQRHEALSNHITELETTIEQMKQEI 750