BLASTX nr result

ID: Aconitum23_contig00044895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00044895
         (368 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_438200.1| polyprotein [Oryza sativa endornavirus] gi|1030...   156   7e-36
ref|YP_438202.1| polyprotein [Oryza rufipogon endornavirus]           135   1e-29

>ref|YP_438200.1| polyprotein [Oryza sativa endornavirus] gi|1030716|dbj|BAA06862.1|
            polyprotein [Oryza sativa endornavirus]
          Length = 4572

 Score =  156 bits (394), Expect = 7e-36
 Identities = 79/122 (64%), Positives = 79/122 (64%)
 Frame = +3

Query: 3    VSYFYIHKNHISCNLKFMGKSVAEXXXXXXXXXXXXXWYYXXXXXXXXXXXXXXXXVKGI 182
            VSYFYIHKNHISCNLKFMGKSVAE             WYY                VKGI
Sbjct: 1834 VSYFYIHKNHISCNLKFMGKSVAEIININGNVTVNGNWYYKRKILDKLDEKLDLNDVKGI 1893

Query: 183  TICPRGTKLVRIKTNQKFRNKVRELAWIVDKCYDGKFXXXXXXXXXXXXXXAGCPLFSGL 362
            TICPRGTKLVRIKTNQKFRNKVRELAWIVDKCYDGKF              AGCPLFSGL
Sbjct: 1894 TICPRGTKLVRIKTNQKFRNKVRELAWIVDKCYDGKFTIKINNIIITITKNAGCPLFSGL 1953

Query: 363  KF 368
            KF
Sbjct: 1954 KF 1955


>ref|YP_438202.1| polyprotein [Oryza rufipogon endornavirus]
          Length = 4627

 Score =  135 bits (340), Expect = 1e-29
 Identities = 66/122 (54%), Positives = 74/122 (60%)
 Frame = +3

Query: 3    VSYFYIHKNHISCNLKFMGKSVAEXXXXXXXXXXXXXWYYXXXXXXXXXXXXXXXXVKGI 182
            VSYFY+ KNHISC LKFMGK+VAE             WYY                + GI
Sbjct: 1889 VSYFYVQKNHISCVLKFMGKTVAEIVNIDGNVTITGPWYYKRKIMDKLDQKLDLNDISGI 1948

Query: 183  TICPRGTKLVRIKTNQKFRNKVRELAWIVDKCYDGKFXXXXXXXXXXXXXXAGCPLFSGL 362
            TICP+GTKLV+I+TNQ+FRNKVRELAWIVDKC+DGK                GCPLFSGL
Sbjct: 1949 TICPKGTKLVKIRTNQRFRNKVRELAWIVDKCHDGKLIIKINDVTITVTKHVGCPLFSGL 2008

Query: 363  KF 368
            KF
Sbjct: 2009 KF 2010


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