BLASTX nr result

ID: Aconitum23_contig00044842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00044842
         (401 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010266459.1| PREDICTED: high mobility group B protein 6-l...    61   4e-07
ref|XP_002273198.1| PREDICTED: high mobility group B protein 6 [...    57   5e-06

>ref|XP_010266459.1| PREDICTED: high mobility group B protein 6-like [Nelumbo nucifera]
          Length = 553

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 49/121 (40%), Positives = 65/121 (53%), Gaps = 20/121 (16%)
 Frame = -3

Query: 381 AETLINIPTDAALVPRRKRGNTKRNPLTPRNPS-NQANILAGKVS----SPLPA---SGK 226
           A T+  +  D   VP +K  N  R  L P+N + N+ANILAGK+S    SPLP    + K
Sbjct: 51  ATTVAEMQVDTDSVPSKKGRN--RRALKPKNATANEANILAGKISQASPSPLPPLQDAEK 108

Query: 225 ENQEPVFL--SSKKTK----------SIEKELEDVRVKLEKMRIXXXXXXXXXXERDEML 82
           EN E + L  S KKTK          S EKELE+++ KLE+MR+           RD+ML
Sbjct: 109 ENHETLSLPRSPKKTKAASKKKESKMSFEKELEELQGKLEQMRLEKEKTEQLLKARDDML 168

Query: 81  R 79
           +
Sbjct: 169 K 169


>ref|XP_002273198.1| PREDICTED: high mobility group B protein 6 [Vitis vinifera]
          Length = 505

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 24/127 (18%)
 Frame = -3

Query: 384 MAETLINIPTDAALVPRRKRGNTKRNPLTPRNPS-NQANILAGKVSSPLPA--------S 232
           MAET+I IP    +    K+  T R  L  ++ S N+ANILAG++S   PA        +
Sbjct: 1   MAETVIEIPMAVPI----KKARTSRKALKEKSSSTNKANILAGQISESSPAPVPTPSEDA 56

Query: 231 GKENQEPVFL---------------SSKKTKSIEKELEDVRVKLEKMRIXXXXXXXXXXE 97
           GKEN E +                  SK+++S E++L++++ KLE++R+           
Sbjct: 57  GKENHESLSQPLSGKKKSKGAQKGKKSKESQSFERDLQEMQEKLEQLRLEKEKTEELLKA 116

Query: 96  RDEMLRV 76
           RDEML++
Sbjct: 117 RDEMLKI 123


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