BLASTX nr result

ID: Aconitum23_contig00044692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00044692
         (352 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                52   3e-07
ref|XP_009799838.1| PREDICTED: uncharacterized protein LOC104245...    48   6e-06

>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 51.6 bits (122), Expect(2) = 3e-07
 Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
 Frame = +2

Query: 56  EMRILRWISGKPREDQI*NECIQDIVKVEPLPKIN*ECHFM*IGHITG*PLSSHIRRRCV 235
           EMR+LRW+ G  R D+I NE I++ V V  +     E      GH+      + + RRC 
Sbjct: 583 EMRMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVKRRSADAPV-RRCE 641

Query: 236 IRI----QLGEKDKQKYWREIM-NDMLVCYVTKDIALDQAK*RN 352
           + +    + G    +KYW E++  D+ + ++T+D+ LD+ + R+
Sbjct: 642 VMVVEGTRRGRGRPKKYWEEVIRQDLAMLHITEDMTLDRKEWRS 685



 Score = 29.3 bits (64), Expect(2) = 3e-07
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1

Query: 1   GNLNKTIVRPAMMYGAEC 54
           G   + +VRPA++YGAEC
Sbjct: 551 GKFYRVVVRPALLYGAEC 568


>ref|XP_009799838.1| PREDICTED: uncharacterized protein LOC104245841 [Nicotiana
           sylvestris]
          Length = 659

 Score = 48.1 bits (113), Expect(2) = 6e-06
 Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
 Frame = +2

Query: 56  EMRILRWISGKPREDQI*NECIQDIVKVEPLPKIN*ECHFM*IGHITG*PLSSHIRRRC- 232
           EMR+LRW+    R D+I NE I D V V P+ +   E      GH+      + + RRC 
Sbjct: 466 EMRMLRWMCEHTRLDRIRNEVIWDKVGVAPMEEKKREARVRWFGHVIRRDTDAPV-RRCE 524

Query: 233 ---VIRIQLGEKDKQKYWREIM-NDMLVCYVTKDIALDQ 337
              +  ++ G    +KYW +++  DM++  +T+D+++D+
Sbjct: 525 RLDLEGLRRGRGRLKKYWGDVIRQDMVLLQLTEDLSMDR 563



 Score = 28.5 bits (62), Expect(2) = 6e-06
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 1   GNLNKTIVRPAMMYGAEC 54
           G   + +VRPAM+YG EC
Sbjct: 434 GKFYRAVVRPAMLYGLEC 451


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