BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00039133
         (506 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008382175.1| PREDICTED: putative ribonuclease H protein A...    60   8e-07
ref|XP_008355389.1| PREDICTED: putative ribonuclease H protein A...    56   9e-06

>ref|XP_008382175.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 427

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 3/143 (2%)
 Frame = -3

Query: 483 LWKSRNALIYNGKSKSTLEVIKNIK--TQMVDPHIAQTTGDLSYATTPPIQNNGNNTSQT 310
           LWK+RN +++NG     LE++K  +  T      +A    +  +  T PI ++G  +   
Sbjct: 204 LWKNRNEVVFNGIHGHPLEILKTWRKSTTKYRAFVAPEPANNCHRVTKPITDSGKTSGM- 262

Query: 309 ADNYWVAPELGSIKYNCDAAFPQNQSTILPSLGWIARNNVGNPIQATGIPSTGF-SSPMA 133
               W  P   +IK N DAA+ +N  T+   +GW+ R+  G  +QATG    G+  S  A
Sbjct: 263 ----WQKPTYETIKINTDAAWCKN--TMRMGVGWLGRDFAG-LLQATGGSGVGYCHSAAA 315

Query: 132 AEGAALLDAMMHAESMFFNSVTL 64
           AE  A+  A+M      F+ V +
Sbjct: 316 AEAIAIRAALMACIDHGFDDVII 338


>ref|XP_008355389.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 883

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 38/128 (29%), Positives = 65/128 (50%)
 Frame = -3

Query: 483  LWKSRNALIYNGKSKSTLEVIKNIKTQMVDPHIAQTTGDLSYATTPPIQNNGNNTSQTAD 304
            LWK+RN +++NG  +  LEV+   +  + +   A +   LS      + +N   T Q+  
Sbjct: 660  LWKNRNDVVFNGVHRQHLEVMMLWRKNIYEFREALS---LSLKCEDQLISNNLKTEQSPR 716

Query: 303  NYWVAPELGSIKYNCDAAFPQNQSTILPSLGWIARNNVGNPIQATGIPSTGFSSPMAAEG 124
             +W  P+ G+IK N DAA+    S++   +GW+ R+  G    A G  ++   S  AAE 
Sbjct: 717  LHWTKPKFGTIKVNTDAAW--CSSSLRTGVGWVGRDFAGLLQFAGGSGTSICHSAAAAEA 774

Query: 123  AALLDAMM 100
             A+  A++
Sbjct: 775  CAIRSALV 782