BLASTX nr result

ID: Aconitum23_contig00039009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00039009
         (482 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007038204.1| Transducin/WD40 repeat-like superfamily prot...    60   5e-07
ref|XP_007028624.1| Uncharacterized protein TCM_024518 [Theobrom...    59   1e-06
gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposo...    59   1e-06

>ref|XP_007038204.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
           gi|508775449|gb|EOY22705.1| Transducin/WD40 repeat-like
           superfamily protein [Theobroma cacao]
          Length = 1029

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 40/105 (38%), Positives = 53/105 (50%)
 Frame = +2

Query: 50  VTLEHEDQAILLLLALPRS*ENLVQTLMLMESQHLTLDEVRTSLLTDDLRKKASGGNRDD 229
           V +E ED A++LL  LP S EN V T ML     LT ++VR SL   +L+KK  GG R++
Sbjct: 261 VKIEDEDLALILLCYLPPSYENFVDT-MLYGRDTLTFEDVRASLNFKELKKKV-GGIRNE 318

Query: 230 KQQAQGLMAXXXXXXXXXXXXXXXXXXXXXXCYKCGEYGHLRTDC 364
            Q A+GL+                       C+ CG+ GH R DC
Sbjct: 319 NQ-AEGLVVNRGRGKEKGLDRKGKSRAKGKTCWNCGQKGHFRQDC 362


>ref|XP_007028624.1| Uncharacterized protein TCM_024518 [Theobroma cacao]
           gi|508717229|gb|EOY09126.1| Uncharacterized protein
           TCM_024518 [Theobroma cacao]
          Length = 277

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 39/105 (37%), Positives = 53/105 (50%)
 Frame = +2

Query: 50  VTLEHEDQAILLLLALPRS*ENLVQTLMLMESQHLTLDEVRTSLLTDDLRKKASGGNRDD 229
           V +E ED A++LL  LP S EN V T ML     LT ++VR  L + +L+KK  GG R++
Sbjct: 139 VKIEDEDLALILLCYLPPSYENFVDT-MLYGRDTLTFEDVRAYLNSKELKKKV-GGIRNE 196

Query: 230 KQQAQGLMAXXXXXXXXXXXXXXXXXXXXXXCYKCGEYGHLRTDC 364
            Q A+GL+                       C+ CG+ GH R DC
Sbjct: 197 NQ-AEGLVVNRGRGKEKGLDKKGKSRAKGKTCWNCGQKGHFRQDC 240


>gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 337

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
 Frame = +2

Query: 50  VTLEHEDQAILLLLALPRS*ENLVQTLMLMESQHLTLDEVRTSLLTDDLRKKASGGNRDD 229
           V ++ EDQA++LL +LP S ENLV T ML     LTL+EV+ +L + +L+KK +  N+ +
Sbjct: 136 VRIDEEDQAVMLLCSLPSSFENLVDT-MLFGRDTLTLEEVKATLNSRELKKKIT-ENKGE 193

Query: 230 KQQAQGLMA--XXXXXXXXXXXXXXXXXXXXXXCYKCGEYGHLRTDCPNKR 376
               + LMA                        CY C + GH R +CP ++
Sbjct: 194 GGDPEALMARGRLEKRDSKSKNKRRSKYKNEKACYYCKKEGHFRKECPERK 244


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